Rw6G032400

RESISTANCE protein

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Reverse (-)
56562451 .. 56571947
9497 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G032400.1

Sequence Viewer

Length: 2082 bp
ATGGGTGGTTGTGGTAAGACCACCCTTGCTGATATTGTATTTCACCAAAACTCATCTGAATTCCATGCTTATGTGTTTTTAGCAAATGTTAGGGAAGAATCAAATAAACTTGGACTATATCATTTGCAAAATAAACTTGTTCGTGAGTTGTTAAAAGAAGAACATTTAAGTATTAACTCTCCATCCATATGGTCGTCTTATGTTATAGATAGGCTTTCTCGTACAAAGGTCCTTGCAGTTCTTGATGATGTGAGTGAAGAAAGTCAATTAGATTTTTTACTTGGAGATCAAGTTCAGTTTGGCCTTGGAAGTAGAATTATTATAACAACGAGAAATAGGCGCCTATTGAAGAAAAAAGTGCATGAAGATCATATATACAAGCTCTTCCAATCAATTGCTTTTAAAGATGACTCTTCTATAAAAGATTGTTCAACCTTGTCAAAAGAAGTGGTCGATTATGCCGGATGCAATCCATTAGCTGTTAAAGTTTTGGCTTATTCATTCCTTCACTGCAATAATAAAGAAGCCTGGGAAGAGGAATTGAAAAAATTGAAAAAATTTCCCAACAAAAAGATACAGAATGTGTTGAGATTGAGTTATCATGGATTAGAAGAAAATGAGAAGGGGATATTTCTTGATATTGCCTGTTTTCTCAAAGGGGAGAATATATGTGATGCAAAAAGAATTGTGGAAATGCTTGGGTTCTTTCCATTGACGGGAATTGAAGTTCTCAAAGATATGTCTCTTATATCGATCAGAGACAACCGCGTAGAGATGCATGATTTGCTGCCGGAAATGGGAAGGGCAATTGCTGGTGGTATTGAAGAACTTGGAAAACGCAAAAGATTGTGGAATGCTGAGGATGGCTATCATGTATTGCGTAATGAAACAGGAACTTCAAAATTTGAAGAACTTGAAGTCATACACCTTGACATGTCCAAGATTCCAGAGTTACAATTGAGTCCTACAGCCTTCAAGAATACGCACAACCTAAAGTTGCTAAAATTTTATGTACCACAAGAAGTGCATGAGGAATGGATAAGTCAGAAAAGACGGACTGTCAAGGAGAAGCAGCCGAGCCCATTTCCTTGGCTTCCTAGGGTCGGAGCATTTCAGTGTTTCCTTGCCAAATCAAGGATCTGGGGATTGTTAGATTCATTCAACAAGGTTTGTGATTATGATGATGAAGTTTTCAAGAAGTTCTGGAAAGTGTTCTTTCCTAGAGGTCTCAAGTCTCTGCCTGAAAATCTCAGATATCTCTATTGGGATAGATACCCTTGGAAATCTTTGCCATCAAAATATTTTCCTGAACAGCTTGTTGAGATTCATATGCCCCATAGCCAAGTTAAGAACCTTTGGAATAATGACCCGAATCTTGGGAGCTTAAAACAGTTAAATCTTAATTGGTCCCAACACCTGATTGAAGTTCCAGATCTCTCTCGTTGTCCAAATATTGAAAAGATCGATCTAAGTTGGTGTACAAGATTGGTTGAAGTTCCTTCATATTTCCAAAATCTTGAGAATCTTACTTATTTAGAGCTGAGAGGCTGCAAGAATCTGAAAATCTTTTCAGCGATACCGTGTAATATAGAATTCTTATATTTGAGTTGGAGCGGAATATATAGAAGAAATATCGCCATCAATTTGGTCTCACGAAAAGCTTCATACATTGGATCTTTCAGGCTGTTTCAAGCTCAAAAGATGGCTTTCTCGTCGTCAGTTGTGGGACGATTGTGCTCTTTGAAAACTCTGAATCTCAGATTCTGCAGTGTATCAGAAATCCCTGATAGTCTCAATTGCTTATCCACATTACAAGATATAGATCTAAGTGGAACCATGATTGAGAAAATACCTGCAAGCATCAAATATGTTTCTGGGCTGCGCTGGCTATGCTTGCTCGGATGCGAGAAGCTTCGATTTTTACCAGAGCTCCCATCGCAGCTAGAAGAATTGGACGTGGGTGCCTGCTGGTCATTGAAAAGCGTGGCAAGTTCAAGGAGTACACTCACGCAACCTCGGGAACAATATAAACATCTGGGTTATCGTGGAGAGAGTGGAGAGAAGGTTATATTAATTTACTGA

Protein Analysis

693

Amino Acids

80.12

Weight (kDa)

8.66

Isoelectric Point (pI)

53.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 1 - 122 7e-13 NB-ARC domain
WHD_ROQ1 PF23282 204 - 270 7.6e-18 Disease resistance protein Roq1-like, winged-helix domain
LRR_14 PF23598 571 - 652 5.8e-08 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 323
Acc36I ACCTGC 1 cut(s) 1861
AccB1I GGYRCC 2 cut(s) 339, 1961
AccBSI CCGCTC 1 cut(s) 1614
AccII CGCG 1 cut(s) 768
AciI CCGC 2 cut(s) 766, 1614
AclWI GGATC 2 cut(s) 1145, 1681
AcsI RAATTY 5 cut(s) 59, 557, 902, 1004, 1592
AcyI GRCGYC 1 cut(s) 340
AfaI GTAC 4 cut(s) 223, 1014, 1480, 2002
AfiI CCNNNNNNNGG 5 cut(s) 716, 797, 1103, 1134, 1376
AflIII ACRYGT 1 cut(s) 933
AhdI GACNNNNNGTC 1 cut(s) 1058
AjiI CACGTC 1 cut(s) 1957
AjnI CCWGG 1 cut(s) 527
AloI GAACNNNNNNTCC 4 cut(s) 276, 308, 711, 743
Alw21I GWGCWC 2 cut(s) 1739, 1932
Alw26I GTCTC 6 cut(s) 747, 753, 1232, 1239, 1654, 1796
AlwI GGATC 2 cut(s) 1145, 1681
AlwNI CAGNNNCTG 1 cut(s) 1764
Ama87I CYCGRG 1 cut(s) 2016
AoxI GGCC 1 cut(s) 301
ApeKI GCWGC 5 cut(s) 787, 1072, 1548, 1879, 1939
ApoI RAATTY 5 cut(s) 59, 557, 902, 1004, 1592
AseI ATTAAT 1 cut(s) 2072
Asp700I GAANNNNTTC 2 cut(s) 1211, 1660
AspA2I CCTAGG 1 cut(s) 1097
AspLEI GCGC 2 cut(s) 342, 1884
AspS9I GGNCC 2 cut(s) 229, 1407
AsuHPI GGTGA 1 cut(s) 35
AvaI CYCGRG 1 cut(s) 2016
AvaII GGWCC 2 cut(s) 229, 1407
AvrII CCTAGG 1 cut(s) 1097
BanI GGYRCC 2 cut(s) 339, 1961
BanII GRGCYC 2 cut(s) 1082, 1932
Bbv12I GWGCWC 2 cut(s) 1739, 1932
BbvCI CCTCAGC 1 cut(s) 858
BbvI GCAGC 5 cut(s) 774, 1084, 1535, 1866, 1951
BccI CCATC 6 cut(s) 190, 857, 1300, 1646, 1696, 1942
BciT130I CCWGG 1 cut(s) 529
BcoDI GTCTC 6 cut(s) 747, 753, 1232, 1239, 1654, 1796
BfaI CTAG 3 cut(s) 1098, 1221, 1943
BfmI CTRYAG 2 cut(s) 966, 1765
BfoI RGCGCY 1 cut(s) 343
BfuAI ACCTGC 1 cut(s) 1861
BglII AGATCT 2 cut(s) 1432, 1822
BisI GCNGC 5 cut(s) 788, 1073, 1549, 1880, 1940
BlnI CCTAGG 1 cut(s) 1097
BlsI GCNGC 5 cut(s) 789, 1074, 1550, 1881, 1941
Bme1390I CCNGG 1 cut(s) 529
Bme18I GGWCC 2 cut(s) 229, 1407
BmeRI GACNNNNNGTC 1 cut(s) 1058
BmeT110I CYCGRG 1 cut(s) 2016
BmgBI CACGTC 1 cut(s) 1957
BmgT120I GGNCC 2 cut(s) 229, 1407
BmiI GGNNCC 4 cut(s) 341, 1409, 1834, 1963
BmrFI CCNGG 1 cut(s) 529
BmsI GCATC 5 cut(s) 455, 664, 765, 1869, 1892
Bpu10I CCTNAGC 1 cut(s) 858
BpuEI CTTGAG 2 cut(s) 1214, 1538
Bsa29I ATCGAT 2 cut(s) 752, 1464
BsaBI GATNNNNATC 2 cut(s) 867, 1821
BsaHI GRCGYC 1 cut(s) 340
BsaI GGTCTC 2 cut(s) 1232, 1654
BsaJI CCNNGG 6 cut(s) 304, 528, 1088, 1097, 1277, 2015
BsaXI ACNNNNNCTCC 6 cut(s) 276, 306, 1914, 1944, 2049, 2079
Bsc4I CCNNNNNNNGG 5 cut(s) 716, 797, 1103, 1134, 1376
Bse8I GATNNNNATC 2 cut(s) 867, 1821
BseBI CCWGG 1 cut(s) 529
BseCI ATCGAT 2 cut(s) 752, 1464
BseDI CCNNGG 6 cut(s) 304, 528, 1088, 1097, 1277, 2015
BseGI GGATG 4 cut(s) 182, 470, 868, 1907
BseJI GATNNNNATC 2 cut(s) 867, 1821
BseLI CCNNNNNNNGG 5 cut(s) 716, 797, 1103, 1134, 1376
BseMII CTCAG 4 cut(s) 849, 1264, 1532, 1771
BseXI GCAGC 5 cut(s) 774, 1084, 1535, 1866, 1951
Bsh1236I CGCG 1 cut(s) 768
BshFI GGCC 1 cut(s) 303
BshNI GGYRCC 2 cut(s) 339, 1961
BshVI ATCGAT 2 cut(s) 752, 1464
BsiHKAI GWGCWC 2 cut(s) 1739, 1932
BsiHKCI CYCGRG 1 cut(s) 2016
BsiSI CCGG 2 cut(s) 462, 791
BslFI GGGAC 2 cut(s) 1393, 1740
BslI CCNNNNNNNGG 5 cut(s) 716, 797, 1103, 1134, 1376
BsmAI GTCTC 6 cut(s) 747, 753, 1232, 1239, 1654, 1796
BsmFI GGGAC 2 cut(s) 1393, 1740
BsmI GAATGC 1 cut(s) 859
BsnI GGCC 1 cut(s) 303
Bso31I GGTCTC 2 cut(s) 1232, 1654
BsoBI CYCGRG 1 cut(s) 2016
Bsp1286I GDGCHC 3 cut(s) 1082, 1739, 1932
Bsp1407I TGTACA 1 cut(s) 1478
Bsp143I GATC 9 cut(s) 286, 367, 753, 1137, 1432, 1461, 1465, 1673, 1822
BspACI CCGC 2 cut(s) 766, 1614
BspANI GGCC 1 cut(s) 303
BspCNI CTCAG 4 cut(s) 850, 1263, 1533, 1770
BspDI ATCGAT 2 cut(s) 752, 1464
BspFNI CGCG 1 cut(s) 768
BspLI GGNNCC 4 cut(s) 341, 1409, 1834, 1963
BspMAI CTGCAG 1 cut(s) 1769
BspMI ACCTGC 1 cut(s) 1861
BspPI GGATC 2 cut(s) 1145, 1681
BspQI GCTCTTC 1 cut(s) 389
BspT107I GGYRCC 2 cut(s) 339, 1961
BspTNI GGTCTC 2 cut(s) 1232, 1654
BsrBI CCGCTC 1 cut(s) 1614
BsrGI TGTACA 1 cut(s) 1478
BssECI CCNNGG 6 cut(s) 304, 528, 1088, 1097, 1277, 2015
BssMI GATC 9 cut(s) 286, 367, 753, 1137, 1432, 1461, 1465, 1673, 1822
BssNI GRCGYC 1 cut(s) 340
BssT1I CCWWGG 4 cut(s) 304, 1088, 1097, 1277
Bst2UI CCWGG 1 cut(s) 529
Bst4CI ACNGT 3 cut(s) 1060, 1392, 1581
Bst6I CTCTTC 3 cut(s) 389, 418, 528
BstACI GRCGYC 1 cut(s) 340
BstAPI GCANNNNNTGC 1 cut(s) 784
BstAUI TGTACA 1 cut(s) 1478
BstC8I GCNNGC 4 cut(s) 1858, 1886, 1895, 1966
BstDEI CTNAG 6 cut(s) 858, 1250, 1469, 1541, 1757, 1826
BstF5I GGATG 4 cut(s) 182, 470, 868, 1907
BstFNI CGCG 1 cut(s) 768
BstH2I RGCGCY 1 cut(s) 343
BstHHI GCGC 2 cut(s) 342, 1884
BstKTI GATC 9 cut(s) 289, 370, 756, 1140, 1435, 1464, 1468, 1676, 1825
BstMAI GTCTC 6 cut(s) 747, 753, 1232, 1239, 1654, 1796
BstMBI GATC 9 cut(s) 286, 367, 753, 1137, 1432, 1461, 1465, 1673, 1822
BstMWI GCNNNNNNNGC 5 cut(s) 784, 1885, 1890, 1894, 1936
BstNI CCWGG 1 cut(s) 529
BstNSI RCATGY 1 cut(s) 937
BstSCI CCNGG 1 cut(s) 527
BstSFI CTRYAG 2 cut(s) 966, 1765
BstUI CGCG 1 cut(s) 768
BstV1I GCAGC 5 cut(s) 774, 1084, 1535, 1866, 1951
BstX2I RGATCY 4 cut(s) 1137, 1432, 1673, 1822
BstXI CCANNNNNNTGG 3 cut(s) 189, 1089, 1645
BstYI RGATCY 4 cut(s) 1137, 1432, 1673, 1822
Bsu15I ATCGAT 2 cut(s) 752, 1464
BsuRI GGCC 1 cut(s) 303
BsuTUI ATCGAT 2 cut(s) 752, 1464
BtgZI GCGATG 1 cut(s) 1920
BtrI CACGTC 1 cut(s) 1957
BtsCI GGATG 4 cut(s) 182, 470, 868, 1907
BtsI GCAGTG 2 cut(s) 508, 1774
BtsIMutI CAGTG 3 cut(s) 508, 1121, 1774
BveI ACCTGC 1 cut(s) 1861
Cac8I GCNNGC 4 cut(s) 1858, 1886, 1895, 1966
CaiI CAGNNNCTG 1 cut(s) 1764
CfoI GCGC 2 cut(s) 342, 1884
Cfr13I GGNCC 2 cut(s) 229, 1407
ClaI ATCGAT 2 cut(s) 752, 1464
Csp6I GTAC 4 cut(s) 222, 1013, 1479, 2001
CspCI CAANNNNNGTGG 2 cut(s) 429, 464
CviAII CATG 8 cut(s) 65, 362, 602, 779, 872, 934, 1028, 1837
CviQI GTAC 4 cut(s) 222, 1013, 1479, 2001
DdeI CTNAG 6 cut(s) 858, 1250, 1469, 1541, 1757, 1826
DinI GGCGCC 1 cut(s) 341
DpnI GATC 9 cut(s) 288, 369, 755, 1139, 1434, 1463, 1467, 1675, 1824
DpnII GATC 9 cut(s) 286, 367, 753, 1137, 1432, 1461, 1465, 1673, 1822
DraI TTTAAA 1 cut(s) 403
DriI GACNNNNNGTC 1 cut(s) 1058
Eam1104I CTCTTC 3 cut(s) 389, 418, 528
Eam1105I GACNNNNNGTC 1 cut(s) 1058
EarI CTCTTC 3 cut(s) 389, 418, 528
Ecl136II GAGCTC 1 cut(s) 1930
Eco130I CCWWGG 4 cut(s) 304, 1088, 1097, 1277
Eco24I GRGCYC 2 cut(s) 1082, 1932
Eco31I GGTCTC 2 cut(s) 1232, 1654
Eco32I GATATC 1 cut(s) 1256
Eco47I GGWCC 2 cut(s) 229, 1407
Eco53kI GAGCTC 1 cut(s) 1930
Eco88I CYCGRG 1 cut(s) 2016
EcoICRI GAGCTC 1 cut(s) 1930
EcoO109I RGGNCCY 1 cut(s) 229
EcoRI GAATTC 2 cut(s) 59, 1592
EcoRII CCWGG 1 cut(s) 527
EcoRV GATATC 1 cut(s) 1256
EcoT14I CCWWGG 4 cut(s) 304, 1088, 1097, 1277
EcoT22I ATGCAT 1 cut(s) 780
EcoT38I GRGCYC 2 cut(s) 1082, 1932
EgeI GGCGCC 1 cut(s) 341
EheI GGCGCC 1 cut(s) 341
ErhI CCWWGG 4 cut(s) 304, 1088, 1097, 1277
FaeI CATG 8 cut(s) 68, 365, 605, 782, 875, 937, 1031, 1840
FaqI GGGAC 2 cut(s) 1393, 1740
FatI CATG 8 cut(s) 64, 361, 601, 778, 871, 933, 1027, 1836
FauNDI CATATG 2 cut(s) 188, 1329
Fnu4HI GCNGC 5 cut(s) 788, 1073, 1549, 1880, 1940
FokI GGATG 4 cut(s) 169, 477, 875, 1914
FriOI GRGCYC 2 cut(s) 1082, 1932
Fsp4HI GCNGC 5 cut(s) 788, 1073, 1549, 1880, 1940
FspBI CTAG 3 cut(s) 1098, 1221, 1943
GlaI GCGC 2 cut(s) 341, 1883
GluI GCNGC 5 cut(s) 788, 1073, 1549, 1880, 1940
HaeII RGCGCY 1 cut(s) 343
HaeIII GGCC 1 cut(s) 303
HapII CCGG 2 cut(s) 462, 791
HhaI GCGC 2 cut(s) 342, 1884
Hin1I GRCGYC 1 cut(s) 340
Hin1II CATG 8 cut(s) 68, 365, 605, 782, 875, 937, 1031, 1840
Hin6I GCGC 2 cut(s) 340, 1882
HinP1I GCGC 2 cut(s) 340, 1882
HindIII AAGCTT 2 cut(s) 1659, 1910
HpaII CCGG 2 cut(s) 462, 791
HphI GGTGA 1 cut(s) 35
Hpy166II GTNNAC 2 cut(s) 1479, 2003
Hpy8I GTNNAC 2 cut(s) 1479, 2003
Hpy99I CGWCG 1 cut(s) 1717
HpyAV CCTTC 6 cut(s) 515, 616, 795, 982, 1509, 2056
HpyCH4III ACNGT 3 cut(s) 1060, 1392, 1581
HpyCH4IV ACGT 1 cut(s) 1956
HpyF10VI GCNNNNNNNGC 5 cut(s) 784, 1885, 1890, 1894, 1936
HpyF3I CTNAG 6 cut(s) 858, 1250, 1469, 1541, 1757, 1826
HpySE526I ACGT 1 cut(s) 1956
Hsp92I GRCGYC 1 cut(s) 340
Hsp92II CATG 8 cut(s) 68, 365, 605, 782, 875, 937, 1031, 1840
HspAI GCGC 2 cut(s) 340, 1882
KasI GGCGCC 1 cut(s) 339
Kzo9I GATC 9 cut(s) 286, 367, 753, 1137, 1432, 1461, 1465, 1673, 1822
LguI GCTCTTC 1 cut(s) 389
LmnI GCTCC 4 cut(s) 1106, 1380, 1611, 1935
Lsp1109I GCAGC 5 cut(s) 774, 1084, 1535, 1866, 1951
LweI GCATC 5 cut(s) 455, 664, 765, 1869, 1892
MaeI CTAG 3 cut(s) 1098, 1221, 1943
MaeII ACGT 1 cut(s) 1956
MaeIII GTNAC 1 cut(s) 951
MalI GATC 9 cut(s) 288, 369, 755, 1139, 1434, 1463, 1467, 1675, 1824
MbiI CCGCTC 1 cut(s) 1614
MboI GATC 9 cut(s) 286, 367, 753, 1137, 1432, 1461, 1465, 1673, 1822
MfeI CAATTG 4 cut(s) 393, 807, 956, 1795
MflI RGATCY 4 cut(s) 1137, 1432, 1673, 1822
MhlI GDGCHC 3 cut(s) 1082, 1739, 1932
Mly113I GGCGCC 1 cut(s) 340
MlyI GAGTC 2 cut(s) 404, 970
MmeI TCCRAC 2 cut(s) 1084, 1589
MnlI CCTC 6 cut(s) 529, 853, 1024, 1217, 1538, 2025
Mph1103I ATGCAT 1 cut(s) 780
MroXI GAANNNNTTC 2 cut(s) 1211, 1660
MslI CAYNNNNRTG 3 cut(s) 69, 187, 1114
MspI CCGG 2 cut(s) 462, 791
MspR9I CCNGG 1 cut(s) 529
MunI CAATTG 4 cut(s) 393, 807, 956, 1795
Mva1269I GAATGC 1 cut(s) 859
MvaI CCWGG 1 cut(s) 529
MvnI CGCG 1 cut(s) 768
MwoI GCNNNNNNNGC 5 cut(s) 784, 1885, 1890, 1894, 1936
NarI GGCGCC 1 cut(s) 340
NdeI CATATG 2 cut(s) 188, 1329
NdeII GATC 9 cut(s) 286, 367, 753, 1137, 1432, 1461, 1465, 1673, 1822
NlaIII CATG 8 cut(s) 68, 365, 605, 782, 875, 937, 1031, 1840
NlaIV GGNNCC 4 cut(s) 341, 1409, 1834, 1963
NmeAIII GCCGAG 1 cut(s) 1101
NsiI ATGCAT 1 cut(s) 780
NspI RCATGY 1 cut(s) 937
PciI ACATGT 1 cut(s) 933
PciSI GCTCTTC 1 cut(s) 389
PctI GAATGC 1 cut(s) 859
PdmI GAANNNNTTC 2 cut(s) 1211, 1660
PfeI GAWTC 9 cut(s) 98, 943, 1154, 1324, 1372, 1522, 1555, 1753, 1761
PkrI GCNGC 5 cut(s) 789, 1074, 1550, 1881, 1941
PleI GAGTC 2 cut(s) 404, 969
PluTI GGCGCC 1 cut(s) 343
PpsI GAGTC 2 cut(s) 404, 969
PpuMI RGGWCCY 1 cut(s) 229
PscI ACATGT 1 cut(s) 933
PshBI ATTAAT 1 cut(s) 2072
PsiI TTATAA 1 cut(s) 323
Psp124BI GAGCTC 1 cut(s) 1932
Psp5II RGGWCCY 1 cut(s) 229
Psp6I CCWGG 1 cut(s) 527
PspGI CCWGG 1 cut(s) 527
PspN4I GGNNCC 4 cut(s) 341, 1409, 1834, 1963
PspPI GGNCC 2 cut(s) 229, 1407
PspPPI RGGWCCY 1 cut(s) 229
PstI CTGCAG 1 cut(s) 1769
PstNI CAGNNNCTG 1 cut(s) 1764
PsuI RGATCY 4 cut(s) 1137, 1432, 1673, 1822
RsaI GTAC 4 cut(s) 223, 1014, 1480, 2002
RsaNI GTAC 4 cut(s) 222, 1013, 1479, 2001
RseI CAYNNNNRTG 3 cut(s) 69, 187, 1114
SacI GAGCTC 1 cut(s) 1932
SapI GCTCTTC 1 cut(s) 389
SatI GCNGC 5 cut(s) 788, 1073, 1549, 1880, 1940
Sau3AI GATC 9 cut(s) 286, 367, 753, 1137, 1432, 1461, 1465, 1673, 1822
Sau96I GGNCC 2 cut(s) 229, 1407
SchI GAGTC 2 cut(s) 404, 970
ScrFI CCNGG 1 cut(s) 529
SduI GDGCHC 3 cut(s) 1082, 1739, 1932
SfaNI GCATC 5 cut(s) 455, 664, 765, 1869, 1892
SfcI CTRYAG 2 cut(s) 966, 1765
SfoI GGCGCC 1 cut(s) 341
SinI GGWCC 2 cut(s) 229, 1407
SmiMI CAYNNNNRTG 3 cut(s) 69, 187, 1114
SmlI CTYRAG 2 cut(s) 1229, 1517
SmoI CTYRAG 2 cut(s) 1229, 1517
SsiI CCGC 2 cut(s) 766, 1614
SspDI GGCGCC 1 cut(s) 339
SspI AATATT 2 cut(s) 1301, 1453
SspMI CTAG 3 cut(s) 1098, 1221, 1943
SstI GAGCTC 1 cut(s) 1932
StyD4I CCNGG 1 cut(s) 527
StyI CCWWGG 4 cut(s) 304, 1088, 1097, 1277
TaaI ACNGT 3 cut(s) 1060, 1392, 1581
TaiI ACGT 1 cut(s) 1959
TaqI TCGA 4 cut(s) 453, 752, 1464, 1915
TatI WGTACW 2 cut(s) 1478, 2000
TfiI GAWTC 9 cut(s) 98, 943, 1154, 1324, 1372, 1522, 1555, 1753, 1761
TscAI CASTG 3 cut(s) 515, 1121, 1774
TseI GCWGC 5 cut(s) 787, 1072, 1548, 1879, 1939
TspDTI ATGAA 8 cut(s) 378, 489, 900, 1146, 1200, 1316, 1491, 1653
TspGWI ACGGA 1 cut(s) 1069
TspRI CASTG 3 cut(s) 515, 1121, 1774
VpaK11BI GGWCC 2 cut(s) 229, 1407
VspI ATTAAT 1 cut(s) 2072
XapI RAATTY 5 cut(s) 59, 557, 902, 1004, 1592
XceI RCATGY 1 cut(s) 937
XmaJI CCTAGG 1 cut(s) 1097
XmnI GAANNNNTTC 2 cut(s) 1211, 1660
XspI CTAG 3 cut(s) 1098, 1221, 1943
Zsp2I ATGCAT 1 cut(s) 780
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.