Disease resistance protein (TIR-NBS-LRR class)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 48 - 225 | 4.5e-53 | TIR domain |
| TIR_2 | PF13676 | 51 - 146 | 7.8e-14 | TIR domain |
| NB-ARC | PF00931 | 246 - 411 | 1.3e-09 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 478 - 549 | 2.5e-22 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_13 | PF23286 | 877 - 1057 | 5e-15 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 883 - 963 | 2e-13 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 903 - 959 | 1e-05 | Leucine rich repeat |
| C-JID | PF20160 | 1128 - 1259 | 4.3e-12 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 468, 1100 |
| AarI | CACCTGC | 1 cut(s) | 1258 |
| Acc16I | TGCGCA | 1 cut(s) | 2245 |
| Acc36I | ACCTGC | 2 cut(s) | 1258, 2237 |
| Acc65I | GGTACC | 1 cut(s) | 872 |
| AccB1I | GGYRCC | 2 cut(s) | 872, 3147 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1618 |
| AccI | GTMKAC | 1 cut(s) | 2145 |
| AccII | CGCG | 4 cut(s) | 173, 1638, 3849, 3897 |
| AccIII | TCCGGA | 1 cut(s) | 2125 |
| AclI | AACGTT | 2 cut(s) | 1772, 3340 |
| AclWI | GGATC | 8 cut(s) | 428, 1031, 1603, 1772, 1785, 2027, 2573, 3427 |
| AcoI | YGGCCR | 3 cut(s) | 3778, 3898, 3946 |
| AcsI | RAATTY | 9 cut(s) | 705, 1249, 1257, 2302, 2357, 2461, 3387, 3607, 3800 |
| AcuI | CTGAAG | 6 cut(s) | 74, 708, 1193, 1382, 2070, 3286 |
| AcvI | CACGTG | 1 cut(s) | 3634 |
| AcyI | GRCGYC | 1 cut(s) | 3844 |
| AdeI | CACNNNGTG | 1 cut(s) | 1606 |
| AfaI | GTAC | 7 cut(s) | 447, 874, 1409, 1648, 1734, 2329, 3586 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 532, 1538, 1618, 3907, 3955, 4003 |
| AflII | CTTAAG | 2 cut(s) | 1807, 2780 |
| AflIII | ACRYGT | 4 cut(s) | 406, 442, 3633, 3823 |
| AhlI | ACTAGT | 1 cut(s) | 1138 |
| AjiI | CACGTC | 1 cut(s) | 1030 |
| AjnI | CCWGG | 5 cut(s) | 1081, 1780, 1961, 2043, 3193 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 695, 727, 1059, 1091 |
| AleI | CACNNNNGTG | 1 cut(s) | 1683 |
| Alw21I | GWGCWC | 1 cut(s) | 3114 |
| AlwI | GGATC | 8 cut(s) | 428, 1031, 1603, 1772, 1785, 2027, 2573, 3427 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1357, 3182 |
| Ama87I | CYCGRG | 3 cut(s) | 591, 1107, 3151 |
| Aor13HI | TCCGGA | 1 cut(s) | 2125 |
| AoxI | GGCC | 8 cut(s) | 522, 1078, 1993, 3591, 3778, 3898, 3946, 3994 |
| ApeKI | GCWGC | 8 cut(s) | 209, 551, 1229, 1283, 1514, 2241, 2749, 3852 |
| ApoI | RAATTY | 9 cut(s) | 705, 1249, 1257, 2302, 2357, 2461, 3387, 3607, 3800 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 2982, 3014, 3592, 3624, 4009, 4041 |
| AseI | ATTAAT | 1 cut(s) | 26 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 738, 1206, 3810 |
| Asp718I | GGTACC | 1 cut(s) | 872 |
| AspLEI | GCGC | 3 cut(s) | 173, 1668, 2246 |
| AspS9I | GGNCC | 8 cut(s) | 10, 275, 523, 1079, 2041, 2451, 3225, 3994 |
| AsuC2I | CCSGG | 1 cut(s) | 1659 |
| AsuHPI | GGTGA | 2 cut(s) | 1697, 3569 |
| AsuNHI | GCTAGC | 1 cut(s) | 3917 |
| AvaI | CYCGRG | 3 cut(s) | 591, 1107, 3151 |
| AvaII | GGWCC | 5 cut(s) | 10, 275, 2041, 2451, 3225 |
| BaeGI | GKGCMC | 2 cut(s) | 2538, 3152 |
| BalI | TGGCCA | 1 cut(s) | 3780 |
| BamHI | GGATCC | 1 cut(s) | 1777 |
| BanI | GGYRCC | 2 cut(s) | 872, 3147 |
| BanII | GRGCYC | 1 cut(s) | 3063 |
| BbrPI | CACGTG | 1 cut(s) | 3634 |
| BbsI | GAAGAC | 1 cut(s) | 696 |
| Bbv12I | GWGCWC | 1 cut(s) | 3114 |
| BbvI | GCAGC | 8 cut(s) | 196, 563, 1216, 1270, 1501, 2228, 2736, 3864 |
| BceAI | ACGGC | 1 cut(s) | 984 |
| BciT130I | CCWGG | 5 cut(s) | 1083, 1782, 1963, 2045, 3195 |
| BciVI | GTATCC | 1 cut(s) | 169 |
| BclI | TGATCA | 1 cut(s) | 318 |
| BcnI | CCSGG | 1 cut(s) | 1659 |
| BcuI | ACTAGT | 1 cut(s) | 1138 |
| BfmI | CTRYAG | 4 cut(s) | 753, 969, 1284, 2711 |
| BfrI | CTTAAG | 2 cut(s) | 1807, 2780 |
| BfuAI | ACCTGC | 2 cut(s) | 1258, 2237 |
| BfuI | GTATCC | 1 cut(s) | 169 |
| BmcAI | AGTACT | 2 cut(s) | 1648, 2329 |
| Bme1390I | CCNGG | 6 cut(s) | 1083, 1659, 1782, 1963, 2045, 3195 |
| Bme18I | GGWCC | 5 cut(s) | 10, 275, 2041, 2451, 3225 |
| BmeT110I | CYCGRG | 3 cut(s) | 591, 1107, 3151 |
| BmgBI | CACGTC | 1 cut(s) | 1030 |
| BmgT120I | GGNCC | 8 cut(s) | 10, 275, 523, 1079, 2041, 2451, 3225, 3994 |
| BmiI | GGNNCC | 8 cut(s) | 12, 277, 874, 995, 1779, 2697, 3149, 3995 |
| BmrFI | CCNGG | 6 cut(s) | 1083, 1659, 1782, 1963, 2045, 3195 |
| BmrI | ACTGGG | 4 cut(s) | 520, 2571, 3612, 4000 |
| BmsI | GCATC | 7 cut(s) | 350, 790, 1587, 1861, 3051, 3283, 3781 |
| BmtI | GCTAGC | 1 cut(s) | 3921 |
| BmuI | ACTGGG | 4 cut(s) | 520, 2571, 3612, 4000 |
| BoxI | GACNNNNGTC | 2 cut(s) | 8, 3513 |
| BpiI | GAAGAC | 1 cut(s) | 696 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2846, 2878 |
| BpmI | CTGGAG | 7 cut(s) | 58, 1083, 1803, 1917, 1984, 2624, 3177 |
| BpuEI | CTTGAG | 5 cut(s) | 275, 1958, 2873, 3047, 3179 |
| BpuMI | CCSGG | 1 cut(s) | 1659 |
| Bsa29I | ATCGAT | 1 cut(s) | 2022 |
| BsaAI | YACGTR | 1 cut(s) | 3634 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1695 |
| BsaHI | GRCGYC | 1 cut(s) | 3844 |
| BsaI | GGTCTC | 3 cut(s) | 2415, 3020, 3763 |
| BsaWI | WCCGGW | 1 cut(s) | 2125 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 255, 285, 3019, 3049 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 532, 1538, 1618, 3907, 3955, 4003 |
| Bse1I | ACTGG | 8 cut(s) | 384, 526, 676, 1121, 2566, 3607, 3995, 4042 |
| Bse3DI | GCAATG | 1 cut(s) | 2440 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1695 |
| BseAI | TCCGGA | 1 cut(s) | 2125 |
| BseBI | CCWGG | 5 cut(s) | 1083, 1782, 1963, 2045, 3195 |
| BseCI | ATCGAT | 1 cut(s) | 2022 |
| BseJI | GATNNNNATC | 1 cut(s) | 1695 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 532, 1538, 1618, 3907, 3955, 4003 |
| BseMI | GCAATG | 1 cut(s) | 2440 |
| BseMII | CTCAG | 5 cut(s) | 172, 1995, 2509, 2573, 2617 |
| BseNI | ACTGG | 8 cut(s) | 384, 526, 676, 1121, 2566, 3607, 3995, 4042 |
| BseRI | GAGGAG | 3 cut(s) | 276, 894, 2708 |
| BseSI | GKGCMC | 2 cut(s) | 2538, 3152 |
| BseXI | GCAGC | 8 cut(s) | 196, 563, 1216, 1270, 1501, 2228, 2736, 3864 |
| BseYI | CCCAGC | 1 cut(s) | 3038 |
| BsgI | GTGCAG | 2 cut(s) | 2788, 3168 |
| Bsh1236I | CGCG | 4 cut(s) | 173, 1638, 3849, 3897 |
| BshFI | GGCC | 8 cut(s) | 524, 1080, 1995, 3593, 3780, 3900, 3948, 3996 |
| BshNI | GGYRCC | 2 cut(s) | 872, 3147 |
| BshVI | ATCGAT | 1 cut(s) | 2022 |
| BsiHKAI | GWGCWC | 1 cut(s) | 3114 |
| BsiHKCI | CYCGRG | 3 cut(s) | 591, 1107, 3151 |
| BsiSI | CCGG | 2 cut(s) | 1658, 2126 |
| BslFI | GGGAC | 3 cut(s) | 953, 3641, 3855 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 532, 1538, 1618, 3907, 3955, 4003 |
| BsmFI | GGGAC | 3 cut(s) | 953, 3641, 3855 |
| BsmI | GAATGC | 2 cut(s) | 389, 1290 |
| BsnI | GGCC | 8 cut(s) | 524, 1080, 1995, 3593, 3780, 3900, 3948, 3996 |
| Bso31I | GGTCTC | 3 cut(s) | 2415, 3020, 3763 |
| BsoBI | CYCGRG | 3 cut(s) | 591, 1107, 3151 |
| Bsp1286I | GDGCHC | 4 cut(s) | 2538, 3063, 3114, 3152 |
| Bsp13I | TCCGGA | 1 cut(s) | 2125 |
| Bsp1407I | TGTACA | 2 cut(s) | 1407, 3584 |
| Bsp19I | CCATGG | 4 cut(s) | 2037, 2477, 3721, 3775 |
| BspANI | GGCC | 8 cut(s) | 524, 1080, 1995, 3593, 3780, 3900, 3948, 3996 |
| BspCNI | CTCAG | 5 cut(s) | 171, 1996, 2508, 2574, 2616 |
| BspDI | ATCGAT | 1 cut(s) | 2022 |
| BspEI | TCCGGA | 1 cut(s) | 2125 |
| BspFNI | CGCG | 4 cut(s) | 173, 1638, 3849, 3897 |
| BspLI | GGNNCC | 8 cut(s) | 12, 277, 874, 995, 1779, 2697, 3149, 3995 |
| BspMAI | CTGCAG | 2 cut(s) | 1288, 2715 |
| BspMI | ACCTGC | 2 cut(s) | 1258, 2237 |
| BspOI | GCTAGC | 1 cut(s) | 3921 |
| BspPI | GGATC | 8 cut(s) | 428, 1031, 1603, 1772, 1785, 2027, 2573, 3427 |
| BspQI | GCTCTTC | 2 cut(s) | 1220, 2739 |
| BspT107I | GGYRCC | 2 cut(s) | 872, 3147 |
| BspTI | CTTAAG | 2 cut(s) | 1807, 2780 |
| BspTNI | GGTCTC | 3 cut(s) | 2415, 3020, 3763 |
| BsrDI | GCAATG | 1 cut(s) | 2440 |
| BsrGI | TGTACA | 2 cut(s) | 1407, 3584 |
| BsrI | ACTGG | 8 cut(s) | 384, 526, 676, 1121, 2566, 3607, 3995, 4042 |
| BssNAI | GTATAC | 1 cut(s) | 2146 |
| BssNI | GRCGYC | 1 cut(s) | 3844 |
| BssT1I | CCWWGG | 5 cut(s) | 2037, 2167, 2477, 3721, 3775 |
| Bst1107I | GTATAC | 1 cut(s) | 2146 |
| Bst2UI | CCWGG | 5 cut(s) | 1083, 1782, 1963, 2045, 3195 |
| Bst6I | CTCTTC | 6 cut(s) | 112, 826, 1212, 1220, 2739, 3215 |
| BstACI | GRCGYC | 1 cut(s) | 3844 |
| BstAFI | CTTAAG | 2 cut(s) | 1807, 2780 |
| BstAUI | TGTACA | 2 cut(s) | 1407, 3584 |
| BstBAI | YACGTR | 1 cut(s) | 3634 |
| BstC8I | GCNNGC | 5 cut(s) | 64, 795, 1288, 3502, 3919 |
| BstDEI | CTNAG | 8 cut(s) | 158, 1823, 2004, 2027, 2362, 2495, 2582, 2603 |
| BstDSI | CCRYGG | 7 cut(s) | 2037, 2477, 3721, 3775, 3847, 3895, 3943 |
| BstFNI | CGCG | 4 cut(s) | 173, 1638, 3849, 3897 |
| BstHHI | GCGC | 3 cut(s) | 173, 1668, 2246 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 90, 347, 1663, 1746, 1957, 2979, 3445, 3852 |
| BstNI | CCWGG | 5 cut(s) | 1083, 1782, 1963, 2045, 3195 |
| BstNSI | RCATGY | 4 cut(s) | 410, 446, 1470, 3827 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 8, 3513 |
| BstSCI | CCNGG | 6 cut(s) | 1081, 1657, 1780, 1961, 2043, 3193 |
| BstSFI | CTRYAG | 4 cut(s) | 753, 969, 1284, 2711 |
| BstSLI | GKGCMC | 2 cut(s) | 2538, 3152 |
| BstUI | CGCG | 4 cut(s) | 173, 1638, 3849, 3897 |
| BstV1I | GCAGC | 8 cut(s) | 196, 563, 1216, 1270, 1501, 2228, 2736, 3864 |
| BstV2I | GAAGAC | 1 cut(s) | 696 |
| BstX2I | RGATCY | 3 cut(s) | 433, 1777, 3419 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2044, 2406 |
| BstYI | RGATCY | 3 cut(s) | 433, 1777, 3419 |
| BstZ17I | GTATAC | 1 cut(s) | 2146 |
| Bsu15I | ATCGAT | 1 cut(s) | 2022 |
| BsuI | GTATCC | 1 cut(s) | 169 |
| BsuRI | GGCC | 8 cut(s) | 524, 1080, 1995, 3593, 3780, 3900, 3948, 3996 |
| BsuTUI | ATCGAT | 1 cut(s) | 2022 |
| BtgI | CCRYGG | 7 cut(s) | 2037, 2477, 3721, 3775, 3847, 3895, 3943 |
| BtrI | CACGTC | 1 cut(s) | 1030 |
| BtsIMutI | CAGTG | 7 cut(s) | 12, 533, 838, 2538, 3171, 3183, 3988 |
| BveI | ACCTGC | 2 cut(s) | 1258, 2237 |
| Cac8I | GCNNGC | 5 cut(s) | 64, 795, 1288, 3502, 3919 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1357, 3182 |
| CfoI | GCGC | 3 cut(s) | 173, 1668, 2246 |
| Cfr13I | GGNCC | 8 cut(s) | 10, 275, 523, 1079, 2041, 2451, 3225, 3994 |
| Cfr42I | CCGCGG | 2 cut(s) | 3850, 3898 |
| ClaI | ATCGAT | 1 cut(s) | 2022 |
| CseI | GACGC | 2 cut(s) | 2837, 3852 |
| Csp6I | GTAC | 7 cut(s) | 446, 873, 1408, 1647, 1733, 2328, 3585 |
| CviQI | GTAC | 7 cut(s) | 446, 873, 1408, 1647, 1733, 2328, 3585 |
| DdeI | CTNAG | 8 cut(s) | 158, 1823, 2004, 2027, 2362, 2495, 2582, 2603 |
| DraIII | CACNNNGTG | 1 cut(s) | 1606 |
| EaeI | YGGCCR | 3 cut(s) | 3778, 3898, 3946 |
| Eam1104I | CTCTTC | 6 cut(s) | 112, 826, 1212, 1220, 2739, 3215 |
| EarI | CTCTTC | 6 cut(s) | 112, 826, 1212, 1220, 2739, 3215 |
| EciI | GGCGGA | 1 cut(s) | 986 |
| Eco130I | CCWWGG | 5 cut(s) | 2037, 2167, 2477, 3721, 3775 |
| Eco147I | AGGCCT | 1 cut(s) | 3593 |
| Eco24I | GRGCYC | 1 cut(s) | 3063 |
| Eco31I | GGTCTC | 3 cut(s) | 2415, 3020, 3763 |
| Eco47I | GGWCC | 5 cut(s) | 10, 275, 2041, 2451, 3225 |
| Eco57I | CTGAAG | 6 cut(s) | 74, 708, 1193, 1382, 2070, 3286 |
| Eco72I | CACGTG | 1 cut(s) | 3634 |
| Eco88I | CYCGRG | 3 cut(s) | 591, 1107, 3151 |
| EcoRI | GAATTC | 1 cut(s) | 2357 |
| EcoRII | CCWGG | 5 cut(s) | 1081, 1780, 1961, 2043, 3193 |
| EcoT14I | CCWWGG | 5 cut(s) | 2037, 2167, 2477, 3721, 3775 |
| EcoT22I | ATGCAT | 2 cut(s) | 343, 3274 |
| EcoT38I | GRGCYC | 1 cut(s) | 3063 |
| ErhI | CCWWGG | 5 cut(s) | 2037, 2167, 2477, 3721, 3775 |
| FaqI | GGGAC | 3 cut(s) | 953, 3641, 3855 |
| FauI | CCCGC | 1 cut(s) | 286 |
| FauNDI | CATATG | 2 cut(s) | 1592, 1956 |
| FbaI | TGATCA | 1 cut(s) | 318 |
| FblI | GTMKAC | 1 cut(s) | 2145 |
| FriOI | GRGCYC | 1 cut(s) | 3063 |
| FspI | TGCGCA | 1 cut(s) | 2245 |
| GlaI | GCGC | 3 cut(s) | 172, 1667, 2245 |
| GsaI | CCCAGC | 1 cut(s) | 3042 |
| GsuI | CTGGAG | 7 cut(s) | 58, 1083, 1803, 1917, 1984, 2624, 3177 |
| HaeIII | GGCC | 8 cut(s) | 524, 1080, 1995, 3593, 3780, 3900, 3948, 3996 |
| HapII | CCGG | 2 cut(s) | 1658, 2126 |
| HgaI | GACGC | 2 cut(s) | 2837, 3852 |
| HhaI | GCGC | 3 cut(s) | 173, 1668, 2246 |
| Hin1I | GRCGYC | 1 cut(s) | 3844 |
| Hin6I | GCGC | 3 cut(s) | 171, 1666, 2244 |
| HinP1I | GCGC | 3 cut(s) | 171, 1666, 2244 |
| HincII | GTYRAC | 2 cut(s) | 982, 1762 |
| HindII | GTYRAC | 2 cut(s) | 982, 1762 |
| HindIII | AAGCTT | 3 cut(s) | 537, 2288, 3437 |
| HpaI | GTTAAC | 1 cut(s) | 1762 |
| HpaII | CCGG | 2 cut(s) | 1658, 2126 |
| HphI | GGTGA | 2 cut(s) | 1697, 3569 |
| Hpy99I | CGWCG | 2 cut(s) | 1028, 1031 |
| HpyCH4IV | ACGT | 4 cut(s) | 1029, 1772, 3340, 3633 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 90, 347, 1663, 1746, 1957, 2979, 3445, 3852 |
| HpyF3I | CTNAG | 8 cut(s) | 158, 1823, 2004, 2027, 2362, 2495, 2582, 2603 |
| HpySE526I | ACGT | 4 cut(s) | 1029, 1772, 3340, 3633 |
| Hsp92I | GRCGYC | 1 cut(s) | 3844 |
| HspAI | GCGC | 3 cut(s) | 171, 1666, 2244 |
| Kpn2I | TCCGGA | 1 cut(s) | 2125 |
| KpnI | GGTACC | 1 cut(s) | 876 |
| Ksp22I | TGATCA | 1 cut(s) | 318 |
| KspAI | GTTAAC | 1 cut(s) | 1762 |
| KspI | CCGCGG | 2 cut(s) | 3850, 3898 |
| LguI | GCTCTTC | 2 cut(s) | 1220, 2739 |
| LmnI | GCTCC | 9 cut(s) | 683, 999, 1784, 1948, 1965, 2321, 2695, 3117, 3276 |
| Lsp1109I | GCAGC | 8 cut(s) | 196, 563, 1216, 1270, 1501, 2228, 2736, 3864 |
| LweI | GCATC | 7 cut(s) | 350, 790, 1587, 1861, 3051, 3283, 3781 |
| MaeII | ACGT | 4 cut(s) | 1029, 1772, 3340, 3633 |
| MaeIII | GTNAC | 5 cut(s) | 1418, 1898, 3178, 3826, 4025 |
| MfeI | CAATTG | 1 cut(s) | 2760 |
| MflI | RGATCY | 3 cut(s) | 433, 1777, 3419 |
| MhlI | GDGCHC | 4 cut(s) | 2538, 3063, 3114, 3152 |
| MlsI | TGGCCA | 1 cut(s) | 3780 |
| MluNI | TGGCCA | 1 cut(s) | 3780 |
| MlyI | GAGTC | 5 cut(s) | 27, 810, 1126, 1974, 3184 |
| MmeI | TCCRAC | 3 cut(s) | 253, 1755, 2035 |
| Mox20I | TGGCCA | 1 cut(s) | 3780 |
| Mph1103I | ATGCAT | 2 cut(s) | 343, 3274 |
| MroI | TCCGGA | 1 cut(s) | 2125 |
| MroXI | GAANNNNTTC | 3 cut(s) | 738, 1206, 3810 |
| MscI | TGGCCA | 1 cut(s) | 3780 |
| MslI | CAYNNNNRTG | 9 cut(s) | 204, 1224, 1559, 1595, 1683, 1796, 2551, 2555, 3528 |
| Msp20I | TGGCCA | 1 cut(s) | 3780 |
| MspA1I | CMGCKG | 2 cut(s) | 3849, 3897 |
| MspCI | CTTAAG | 2 cut(s) | 1807, 2780 |
| MspI | CCGG | 2 cut(s) | 1658, 2126 |
| MspR9I | CCNGG | 6 cut(s) | 1083, 1659, 1782, 1963, 2045, 3195 |
| MunI | CAATTG | 1 cut(s) | 2760 |
| Mva1269I | GAATGC | 2 cut(s) | 389, 1290 |
| MvaI | CCWGG | 5 cut(s) | 1083, 1782, 1963, 2045, 3195 |
| MvnI | CGCG | 4 cut(s) | 173, 1638, 3849, 3897 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 90, 347, 1663, 1746, 1957, 2979, 3445, 3852 |
| NciI | CCSGG | 1 cut(s) | 1659 |
| NcoI | CCATGG | 4 cut(s) | 2037, 2477, 3721, 3775 |
| NdeI | CATATG | 2 cut(s) | 1592, 1956 |
| NheI | GCTAGC | 1 cut(s) | 3917 |
| NlaIV | GGNNCC | 8 cut(s) | 12, 277, 874, 995, 1779, 2697, 3149, 3995 |
| NmuCI | GTSAC | 2 cut(s) | 3178, 4025 |
| NsbI | TGCGCA | 1 cut(s) | 2245 |
| NsiI | ATGCAT | 2 cut(s) | 343, 3274 |
| NspI | RCATGY | 4 cut(s) | 410, 446, 1470, 3827 |
| OliI | CACNNNNGTG | 1 cut(s) | 1683 |
| PaeR7I | CTCGAG | 1 cut(s) | 1107 |
| PaqCI | CACCTGC | 1 cut(s) | 1258 |
| PceI | AGGCCT | 1 cut(s) | 3593 |
| PciI | ACATGT | 3 cut(s) | 406, 442, 3823 |
| PciSI | GCTCTTC | 2 cut(s) | 1220, 2739 |
| PctI | GAATGC | 2 cut(s) | 389, 1290 |
| PdmI | GAANNNNTTC | 3 cut(s) | 738, 1206, 3810 |
| PflFI | GACNNNGTC | 1 cut(s) | 3166 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1618 |
| PfoI | TCCNGGA | 1 cut(s) | 1780 |
| PleI | GAGTC | 5 cut(s) | 27, 810, 1126, 1974, 3184 |
| PmaCI | CACGTG | 1 cut(s) | 3634 |
| PmlI | CACGTG | 1 cut(s) | 3634 |
| PpsI | GAGTC | 5 cut(s) | 27, 810, 1126, 1974, 3184 |
| Ppu21I | YACGTR | 1 cut(s) | 3634 |
| PscI | ACATGT | 3 cut(s) | 406, 442, 3823 |
| PshAI | GACNNNNGTC | 2 cut(s) | 8, 3513 |
| PshBI | ATTAAT | 1 cut(s) | 26 |
| PsiI | TTATAA | 2 cut(s) | 468, 1100 |
| Psp1406I | AACGTT | 2 cut(s) | 1772, 3340 |
| Psp6I | CCWGG | 5 cut(s) | 1081, 1780, 1961, 2043, 3193 |
| PspCI | CACGTG | 1 cut(s) | 3634 |
| PspFI | CCCAGC | 1 cut(s) | 3038 |
| PspGI | CCWGG | 5 cut(s) | 1081, 1780, 1961, 2043, 3193 |
| PspN4I | GGNNCC | 8 cut(s) | 12, 277, 874, 995, 1779, 2697, 3149, 3995 |
| PspPI | GGNCC | 8 cut(s) | 10, 275, 523, 1079, 2041, 2451, 3225, 3994 |
| PstI | CTGCAG | 2 cut(s) | 1288, 2715 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1357, 3182 |
| PsuI | RGATCY | 3 cut(s) | 433, 1777, 3419 |
| PsyI | GACNNNGTC | 1 cut(s) | 3166 |
| RsaI | GTAC | 7 cut(s) | 447, 874, 1409, 1648, 1734, 2329, 3586 |
| RsaNI | GTAC | 7 cut(s) | 446, 873, 1408, 1647, 1733, 2328, 3585 |
| RseI | CAYNNNNRTG | 9 cut(s) | 204, 1224, 1559, 1595, 1683, 1796, 2551, 2555, 3528 |
| SacII | CCGCGG | 2 cut(s) | 3850, 3898 |
| SapI | GCTCTTC | 2 cut(s) | 1220, 2739 |
| Sau96I | GGNCC | 8 cut(s) | 10, 275, 523, 1079, 2041, 2451, 3225, 3994 |
| ScaI | AGTACT | 2 cut(s) | 1648, 2329 |
| SchI | GAGTC | 5 cut(s) | 27, 810, 1126, 1974, 3184 |
| ScrFI | CCNGG | 6 cut(s) | 1083, 1659, 1782, 1963, 2045, 3195 |
| SduI | GDGCHC | 4 cut(s) | 2538, 3063, 3114, 3152 |
| SfaNI | GCATC | 7 cut(s) | 350, 790, 1587, 1861, 3051, 3283, 3781 |
| SfcI | CTRYAG | 4 cut(s) | 753, 969, 1284, 2711 |
| Sfr274I | CTCGAG | 1 cut(s) | 1107 |
| Sfr303I | CCGCGG | 2 cut(s) | 3850, 3898 |
| SgrBI | CCGCGG | 2 cut(s) | 3850, 3898 |
| SinI | GGWCC | 5 cut(s) | 10, 275, 2041, 2451, 3225 |
| SlaI | CTCGAG | 1 cut(s) | 1107 |
| SmiMI | CAYNNNNRTG | 9 cut(s) | 204, 1224, 1559, 1595, 1683, 1796, 2551, 2555, 3528 |
| SmlI | CTYRAG | 8 cut(s) | 254, 1107, 1807, 1973, 2780, 2852, 3062, 3158 |
| SmoI | CTYRAG | 8 cut(s) | 254, 1107, 1807, 1973, 2780, 2852, 3062, 3158 |
| SpeI | ACTAGT | 1 cut(s) | 1138 |
| SseBI | AGGCCT | 1 cut(s) | 3593 |
| SspI | AATATT | 1 cut(s) | 3433 |
| StuI | AGGCCT | 1 cut(s) | 3593 |
| StyD4I | CCNGG | 6 cut(s) | 1081, 1657, 1780, 1961, 2043, 3193 |
| StyI | CCWWGG | 5 cut(s) | 2037, 2167, 2477, 3721, 3775 |
| TaiI | ACGT | 4 cut(s) | 1032, 1775, 3343, 3636 |
| TaqI | TCGA | 7 cut(s) | 297, 964, 1023, 1090, 1108, 2022, 2468 |
| TaqII | GACCGA | 2 cut(s) | 473, 3242 |
| TatI | WGTACW | 5 cut(s) | 1407, 1646, 1732, 2327, 3584 |
| TauI | GCSGC | 6 cut(s) | 3094, 3849, 3852, 3900, 3951, 3999 |
| TscAI | CASTG | 7 cut(s) | 12, 533, 845, 2538, 3171, 3183, 3995 |
| TseFI | GTSAC | 2 cut(s) | 3178, 4025 |
| TseI | GCWGC | 8 cut(s) | 209, 551, 1229, 1283, 1514, 2241, 2749, 3852 |
| Tsp45I | GTSAC | 2 cut(s) | 3178, 4025 |
| TspGWI | ACGGA | 5 cut(s) | 100, 235, 304, 527, 828 |
| TspRI | CASTG | 7 cut(s) | 12, 533, 845, 2538, 3171, 3183, 3995 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3166 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1618 |
| Vha464I | CTTAAG | 2 cut(s) | 1807, 2780 |
| VpaK11BI | GGWCC | 5 cut(s) | 10, 275, 2041, 2451, 3225 |
| VspI | ATTAAT | 1 cut(s) | 26 |
| XapI | RAATTY | 9 cut(s) | 705, 1249, 1257, 2302, 2357, 2461, 3387, 3607, 3800 |
| XbaI | TCTAGA | 1 cut(s) | 1855 |
| XceI | RCATGY | 4 cut(s) | 410, 446, 1470, 3827 |
| XhoI | CTCGAG | 1 cut(s) | 1107 |
| XmiI | GTMKAC | 1 cut(s) | 2145 |
| XmnI | GAANNNNTTC | 3 cut(s) | 738, 1206, 3810 |
| ZrmI | AGTACT | 2 cut(s) | 1648, 2329 |
| Zsp2I | ATGCAT | 2 cut(s) | 343, 3274 |