pycom05g13720

Toll - interleukin 1 - resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
17239054 .. 17240977
1924 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g13720.2

Sequence Viewer

Length: 1500 bp
ATGGTTATACCCGTATTCTATGACATCAATCCATCTGATGTACGAAAACAATACGGGAGTTATGCAGATGCATTTGTTCAACTTGAAAAACGATTCGCTAACAATATTGACAAGGTGCACAAGTGGAGGGATGCTTTGACGACTGCAGCCAATCTATCTGGGTTTGATCATTCAAACAAATCCGAGACGGAGGCAGATCTAATTCAGAAAGTTGTCGATCATATTTGGACCCAATTGTGTCGTGAATCATCCTACGATTTAAAGGGCTTTGTTGGAATTGAAGGCCGCATTAAGAAGATTGAATCGCTATTAAGCATTCATCCACATGACGCTTGCATCACTGTCGGTATTTGGGGCATGGGTGGAATTGGCAAGACCACCCTTGCCGAGGCTGTATTTCACAAACACTCTTCTAAATTCGAAGCTTCTTGTTTTCTTAAGAATGTTACGGAGAACTCAAAACAAGCAGGTGGACTAGGTCACTTGGAAAAAACACTTCTTAAGGAGATATTAAAGGAAGAAGTTCTGCCCATAGGATCAACTTCGGTTCGAGAAAGGCTCAGCCGCACAAGGGTCCTCATTGTTCTTGACGATGTGAGTAGTTCAATGCAAGTGGAACGTTTAGCTGGCGATCGATATGGCACTGGAAGTAGAATCATTATCACAACTAGAGATAGGGGCACACTTGGGCCAACTGTTGAAGAGGATAATATCTACGAGGTTGAGGTATTAAAACCAGATGACGCTCTTCAGCTCTTCTGTTCGCGTGCTTTCAAGAATAACAGTACTCGTAGAACAGATTATATGCAGTCGGCAAAAAATGTTGTGCATTATGCCAGAGGCGTTCCTTTAGCTCTTACAGTTCTGGGGTCTTTGTTCTTCAATTGCAAGAGCAAAGAAGAATGGGAAGATGAATTCAACAAAATGAAACGATATCCCAGTGAAAGTATCCAGGAAGTGTTGAGAATAAGTTATGATAGATTGGATAGAAATGCGAAGGAGATATTTCTGGATATAGCATGTTTTTTTAAAGGGTGGCGTGTGGATAAGGTAAGACGAATGATACATGTTCGTGAATTGTTTTGGCCATCCGGAATTAGAATTCTTATTGATATGTCTCTCATATCAATTGATTCAACACGGAAAGTTGAAACCATACAGATGCACGATTTGCTACAACAAATGGGAAGGACAATTGTTCAGGAACAATGTATTAAAGATCCCTCTAAACGGAATAGGTTGTTCACTGATGAGGATGTCTATCATGTGTTGGAGAGTAACATGGAAACTCCAAATGTTGAAGCCATAGTCCTTAATTGGCATTACATTGCAGAGCGACCATTGAAACGTGCAGACTTCAAAGTGATGTCTAACCTAAGATTGCTAATTGTCTATGGTGGCTACACATTCAACGCCACATTCAACGCTTCTCTGGACCTTCCCGATTCACTTCGTTATCTTGAGTGGTGGAGATATCCACTGGATTCATATGCCATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

500

Amino Acids

57.44

Weight (kDa)

7.21

Isoelectric Point (pI)

44.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 458
Acc36I ACCTGC 1 cut(s) 458
AccII CGCG 1 cut(s) 766
AccIII TCCGGA 1 cut(s) 1091
AciI CCGC 2 cut(s) 286, 565
AclI AACGTT 1 cut(s) 619
AclWI GGATC 2 cut(s) 544, 1214
AcoI YGGCCR 1 cut(s) 1085
AcsI RAATTY 3 cut(s) 416, 914, 1101
AcuI CTGAAG 1 cut(s) 734
AfaI GTAC 2 cut(s) 42, 787
AfiI CCNNNNNNNGG 3 cut(s) 388, 571, 1230
AflII CTTAAG 2 cut(s) 437, 500
AflIII ACRYGT 1 cut(s) 1066
AjnI CCWGG 1 cut(s) 951
AluBI AGCT 4 cut(s) 425, 626, 754, 854
AluI AGCT 4 cut(s) 425, 626, 754, 854
Alw21I GWGCWC 1 cut(s) 120
Alw26I GTCTC 2 cut(s) 179, 1122
Alw44I GTGCAC 1 cut(s) 116
AlwI GGATC 2 cut(s) 544, 1214
Aor13HI TCCGGA 1 cut(s) 1091
AoxI GGCC 3 cut(s) 283, 689, 1085
ApaLI GTGCAC 1 cut(s) 116
ApeKI GCWGC 1 cut(s) 146
ApoI RAATTY 3 cut(s) 416, 914, 1101
Asp700I GAANNNNTTC 1 cut(s) 522
AspS9I GGNCC 4 cut(s) 228, 574, 689, 1435
AsuII TTCGAA 1 cut(s) 420
AvaII GGWCC 3 cut(s) 228, 574, 1435
BaeGI GKGCMC 2 cut(s) 120, 683
BalI TGGCCA 1 cut(s) 1087
Bbv12I GWGCWC 1 cut(s) 120
BbvI GCAGC 1 cut(s) 158
BccI CCATC 2 cut(s) 40, 1096
BcgI CGANNNNNNTGC 2 cut(s) 325, 359
BciT130I CCWGG 1 cut(s) 953
BciVI GTATCC 1 cut(s) 959
BclI TGATCA 1 cut(s) 166
BcoDI GTCTC 2 cut(s) 179, 1122
BfaI CTAG 2 cut(s) 476, 669
BfmI CTRYAG 1 cut(s) 144
BfrI CTTAAG 2 cut(s) 437, 500
BfuAI ACCTGC 1 cut(s) 458
BfuI GTATCC 1 cut(s) 959
BglII AGATCT 1 cut(s) 196
BisI GCNGC 3 cut(s) 147, 286, 565
BlpI GCTNAGC 1 cut(s) 560
BlsI GCNGC 3 cut(s) 148, 287, 566
BmcAI AGTACT 1 cut(s) 787
Bme1390I CCNGG 1 cut(s) 953
Bme18I GGWCC 3 cut(s) 228, 574, 1435
BmgT120I GGNCC 4 cut(s) 228, 574, 689, 1435
BmiI GGNNCC 2 cut(s) 230, 575
BmrFI CCNGG 1 cut(s) 953
BmrI ACTGGG 1 cut(s) 933
BmsI GCATC 4 cut(s) 58, 121, 345, 1152
BmuI ACTGGG 1 cut(s) 933
BplI GAGNNNNNCTC 2 cut(s) 543, 575
Bpu1102I GCTNAGC 1 cut(s) 560
Bpu14I TTCGAA 1 cut(s) 420
BpuEI CTTGAG 1 cut(s) 1481
Bsa29I ATCGAT 1 cut(s) 634
BsaBI GATNNNNATC 1 cut(s) 1260
BsaJI CCNNGG 1 cut(s) 387
BsaWI WCCGGW 1 cut(s) 1091
Bsc4I CCNNNNNNNGG 3 cut(s) 388, 571, 1230
Bse1I ACTGG 3 cut(s) 649, 939, 1485
Bse3DI GCAATG 1 cut(s) 1326
Bse8I GATNNNNATC 1 cut(s) 1260
BseAI TCCGGA 1 cut(s) 1091
BseBI CCWGG 1 cut(s) 953
BseCI ATCGAT 1 cut(s) 634
BseDI CCNNGG 1 cut(s) 387
BseGI GGATG 5 cut(s) 136, 248, 319, 1088, 1261
BseJI GATNNNNATC 1 cut(s) 1260
BseLI CCNNNNNNNGG 3 cut(s) 388, 571, 1230
BseMI GCAATG 1 cut(s) 1326
BseMII CTCAG 1 cut(s) 574
BseNI ACTGG 3 cut(s) 649, 939, 1485
BseSI GKGCMC 2 cut(s) 120, 683
BseXI GCAGC 1 cut(s) 158
BsgI GTGCAG 1 cut(s) 1371
Bsh1236I CGCG 1 cut(s) 766
Bsh1285I CGRYCG 1 cut(s) 634
BshFI GGCC 3 cut(s) 285, 691, 1087
BshVI ATCGAT 1 cut(s) 634
BsiEI CGRYCG 1 cut(s) 634
BsiHKAI GWGCWC 1 cut(s) 120
BsiSI CCGG 1 cut(s) 1092
BslI CCNNNNNNNGG 3 cut(s) 388, 571, 1230
BsmAI GTCTC 2 cut(s) 179, 1122
BsmBI CGTCTC 1 cut(s) 179
BsmI GAATGC 1 cut(s) 315
BsnI GGCC 3 cut(s) 285, 691, 1087
Bsp119I TTCGAA 1 cut(s) 420
Bsp1286I GDGCHC 2 cut(s) 120, 683
Bsp13I TCCGGA 1 cut(s) 1091
Bsp143I GATC 6 cut(s) 166, 196, 217, 536, 631, 1219
Bsp1720I GCTNAGC 1 cut(s) 560
BspACI CCGC 2 cut(s) 286, 565
BspANI GGCC 3 cut(s) 285, 691, 1087
BspCNI CTCAG 1 cut(s) 573
BspDI ATCGAT 1 cut(s) 634
BspEI TCCGGA 1 cut(s) 1091
BspFNI CGCG 1 cut(s) 766
BspLI GGNNCC 2 cut(s) 230, 575
BspMAI CTGCAG 1 cut(s) 148
BspMI ACCTGC 1 cut(s) 458
BspPI GGATC 2 cut(s) 544, 1214
BspQI GCTCTTC 2 cut(s) 753, 761
BspT104I TTCGAA 1 cut(s) 420
BspTI CTTAAG 2 cut(s) 437, 500
BsrDI GCAATG 1 cut(s) 1326
BsrI ACTGG 3 cut(s) 649, 939, 1485
BssECI CCNNGG 1 cut(s) 387
BssMI GATC 6 cut(s) 166, 196, 217, 536, 631, 1219
Bst2UI CCWGG 1 cut(s) 953
Bst4CI ACNGT 4 cut(s) 343, 697, 785, 862
Bst6I CTCTTC 4 cut(s) 415, 696, 753, 761
BstAFI CTTAAG 2 cut(s) 437, 500
BstAPI GCANNNNNTGC 1 cut(s) 1171
BstBI TTCGAA 1 cut(s) 420
BstC8I GCNNGC 3 cut(s) 334, 628, 768
BstDEI CTNAG 2 cut(s) 560, 1376
BstENI CCTNNNNNAGG 1 cut(s) 386
BstF5I GGATG 5 cut(s) 136, 248, 319, 1088, 1261
BstFNI CGCG 1 cut(s) 766
BstKTI GATC 6 cut(s) 169, 199, 220, 539, 634, 1222
BstMAI GTCTC 2 cut(s) 179, 1122
BstMBI GATC 6 cut(s) 166, 196, 217, 536, 631, 1219
BstMCI CGRYCG 1 cut(s) 634
BstMWI GCNNNNNNNGC 1 cut(s) 1171
BstNI CCWGG 1 cut(s) 953
BstNSI RCATGY 2 cut(s) 1023, 1070
BstSCI CCNGG 1 cut(s) 951
BstSFI CTRYAG 1 cut(s) 144
BstSLI GKGCMC 2 cut(s) 120, 683
BstUI CGCG 1 cut(s) 766
BstV1I GCAGC 1 cut(s) 158
BstX2I RGATCY 2 cut(s) 196, 1219
BstYI RGATCY 2 cut(s) 196, 1219
Bsu15I ATCGAT 1 cut(s) 634
BsuI GTATCC 1 cut(s) 959
BsuRI GGCC 3 cut(s) 285, 691, 1087
BsuTUI ATCGAT 1 cut(s) 634
BtsCI GGATG 5 cut(s) 136, 248, 319, 1088, 1261
BtsIMutI CAGTG 5 cut(s) 339, 642, 946, 1245, 1478
BveI ACCTGC 1 cut(s) 458
Cac8I GCNNGC 3 cut(s) 334, 628, 768
Cfr13I GGNCC 4 cut(s) 228, 574, 689, 1435
ClaI ATCGAT 1 cut(s) 634
CseI GACGC 2 cut(s) 338, 752
Csp6I GTAC 2 cut(s) 41, 786
CspCI CAANNNNNGTGG 2 cut(s) 594, 629
CviAII CATG 6 cut(s) 326, 358, 1020, 1067, 1265, 1282
CviQI GTAC 2 cut(s) 41, 786
DdeI CTNAG 2 cut(s) 560, 1376
DpnI GATC 6 cut(s) 168, 198, 219, 538, 633, 1221
DpnII GATC 6 cut(s) 166, 196, 217, 536, 631, 1219
DraI TTTAAA 2 cut(s) 261, 1030
EaeI YGGCCR 1 cut(s) 1085
Eam1104I CTCTTC 4 cut(s) 415, 696, 753, 761
EarI CTCTTC 4 cut(s) 415, 696, 753, 761
Eco32I GATATC 2 cut(s) 935, 1475
Eco47I GGWCC 3 cut(s) 228, 574, 1435
Eco57I CTGAAG 1 cut(s) 734
EcoNI CCTNNNNNAGG 1 cut(s) 386
EcoO109I RGGNCCY 1 cut(s) 574
EcoRI GAATTC 2 cut(s) 914, 1101
EcoRII CCWGG 1 cut(s) 951
EcoRV GATATC 2 cut(s) 935, 1475
EcoT22I ATGCAT 1 cut(s) 73
Esp3I CGTCTC 1 cut(s) 179
FaeI CATG 6 cut(s) 329, 361, 1023, 1070, 1268, 1285
FatI CATG 6 cut(s) 325, 357, 1019, 1066, 1264, 1281
FauNDI CATATG 1 cut(s) 1489
FbaI TGATCA 1 cut(s) 166
Fnu4HI GCNGC 3 cut(s) 147, 286, 565
FokI GGATG 5 cut(s) 143, 235, 306, 1075, 1268
Fsp4HI GCNGC 3 cut(s) 147, 286, 565
FspBI CTAG 2 cut(s) 476, 669
GluI GCNGC 3 cut(s) 147, 286, 565
HaeIII GGCC 3 cut(s) 285, 691, 1087
HapII CCGG 1 cut(s) 1092
HgaI GACGC 2 cut(s) 338, 752
Hin1II CATG 6 cut(s) 329, 361, 1023, 1070, 1268, 1285
HindIII AAGCTT 1 cut(s) 423
HinfI GANTC 7 cut(s) 93, 245, 302, 654, 1133, 1445, 1484
HpaII CCGG 1 cut(s) 1092
Hpy166II GTNNAC 3 cut(s) 118, 473, 1245
Hpy188I TCNGA 3 cut(s) 37, 184, 207
Hpy8I GTNNAC 3 cut(s) 118, 473, 1245
HpyAV CCTTC 4 cut(s) 275, 991, 1182, 1448
HpyCH4III ACNGT 4 cut(s) 343, 697, 785, 862
HpyCH4IV ACGT 2 cut(s) 619, 1348
HpyF10VI GCNNNNNNNGC 1 cut(s) 1171
HpyF3I CTNAG 2 cut(s) 560, 1376
HpySE526I ACGT 2 cut(s) 619, 1348
Hsp92II CATG 6 cut(s) 329, 361, 1023, 1070, 1268, 1285
Kpn2I TCCGGA 1 cut(s) 1091
Ksp22I TGATCA 1 cut(s) 166
Kzo9I GATC 6 cut(s) 166, 196, 217, 536, 631, 1219
LguI GCTCTTC 2 cut(s) 753, 761
Lsp1109I GCAGC 1 cut(s) 158
LweI GCATC 4 cut(s) 58, 121, 345, 1152
MaeI CTAG 2 cut(s) 476, 669
MaeII ACGT 2 cut(s) 619, 1348
MaeIII GTNAC 3 cut(s) 445, 479, 1277
MalI GATC 6 cut(s) 168, 198, 219, 538, 633, 1221
MboI GATC 6 cut(s) 166, 196, 217, 536, 631, 1219
MboII GAAGA 9 cut(s) 307, 402, 530, 713, 740, 748, 871, 911, 920
MfeI CAATTG 4 cut(s) 233, 883, 1128, 1194
MflI RGATCY 2 cut(s) 196, 1219
MhlI GDGCHC 2 cut(s) 120, 683
MlsI TGGCCA 1 cut(s) 1087
MluNI TGGCCA 1 cut(s) 1087
MmeI TCCRAC 2 cut(s) 253, 1251
Mox20I TGGCCA 1 cut(s) 1087
Mph1103I ATGCAT 1 cut(s) 73
MroI TCCGGA 1 cut(s) 1091
MroXI GAANNNNTTC 1 cut(s) 522
MscI TGGCCA 1 cut(s) 1087
MslI CAYNNNNRTG 3 cut(s) 324, 1071, 1160
Msp20I TGGCCA 1 cut(s) 1087
MspCI CTTAAG 2 cut(s) 437, 500
MspI CCGG 1 cut(s) 1092
MspR9I CCNGG 1 cut(s) 953
MunI CAATTG 4 cut(s) 233, 883, 1128, 1194
Mva1269I GAATGC 1 cut(s) 315
MvaI CCWGG 1 cut(s) 953
MvnI CGCG 1 cut(s) 766
MwoI GCNNNNNNNGC 1 cut(s) 1171
NdeI CATATG 1 cut(s) 1489
NdeII GATC 6 cut(s) 166, 196, 217, 536, 631, 1219
NlaIII CATG 6 cut(s) 329, 361, 1023, 1070, 1268, 1285
NlaIV GGNNCC 2 cut(s) 230, 575
NmeAIII GCCGAG 1 cut(s) 412
NmuCI GTSAC 1 cut(s) 479
NsiI ATGCAT 1 cut(s) 73
NspI RCATGY 2 cut(s) 1023, 1070
NspV TTCGAA 1 cut(s) 420
PaqCI CACCTGC 1 cut(s) 458
PciI ACATGT 1 cut(s) 1066
PciSI GCTCTTC 2 cut(s) 753, 761
PctI GAATGC 1 cut(s) 315
PdmI GAANNNNTTC 1 cut(s) 522
PfeI GAWTC 7 cut(s) 93, 245, 302, 654, 1133, 1445, 1484
PflFI GACNNNGTC 1 cut(s) 477
PfoI TCCNGGA 1 cut(s) 951
PkrI GCNGC 3 cut(s) 148, 287, 566
Ple19I CGATCG 1 cut(s) 634
PpuMI RGGWCCY 1 cut(s) 574
PscI ACATGT 1 cut(s) 1066
Psp1406I AACGTT 1 cut(s) 619
Psp5II RGGWCCY 1 cut(s) 574
Psp6I CCWGG 1 cut(s) 951
PspGI CCWGG 1 cut(s) 951
PspN4I GGNNCC 2 cut(s) 230, 575
PspPI GGNCC 4 cut(s) 228, 574, 689, 1435
PspPPI RGGWCCY 1 cut(s) 574
PstI CTGCAG 1 cut(s) 148
PsuI RGATCY 2 cut(s) 196, 1219
PsyI GACNNNGTC 1 cut(s) 477
PvuI CGATCG 1 cut(s) 634
RsaI GTAC 2 cut(s) 42, 787
RsaNI GTAC 2 cut(s) 41, 786
RseI CAYNNNNRTG 3 cut(s) 324, 1071, 1160
SapI GCTCTTC 2 cut(s) 753, 761
SatI GCNGC 3 cut(s) 147, 286, 565
Sau3AI GATC 6 cut(s) 166, 196, 217, 536, 631, 1219
Sau96I GGNCC 4 cut(s) 228, 574, 689, 1435
ScaI AGTACT 1 cut(s) 787
ScrFI CCNGG 1 cut(s) 953
SduI GDGCHC 2 cut(s) 120, 683
SfaNI GCATC 4 cut(s) 58, 121, 345, 1152
SfcI CTRYAG 1 cut(s) 144
SfuI TTCGAA 1 cut(s) 420
SinI GGWCC 3 cut(s) 228, 574, 1435
SmiMI CAYNNNNRTG 3 cut(s) 324, 1071, 1160
SmlI CTYRAG 3 cut(s) 437, 500, 1460
SmoI CTYRAG 3 cut(s) 437, 500, 1460
SsiI CCGC 2 cut(s) 286, 565
SspI AATATT 1 cut(s) 106
SspMI CTAG 2 cut(s) 476, 669
StyD4I CCNGG 1 cut(s) 951
TaaI ACNGT 4 cut(s) 343, 697, 785, 862
TaiI ACGT 2 cut(s) 622, 1351
TaqI TCGA 4 cut(s) 216, 420, 550, 634
TatI WGTACW 1 cut(s) 785
TauI GCSGC 2 cut(s) 288, 567
TfiI GAWTC 7 cut(s) 93, 245, 302, 654, 1133, 1445, 1484
TscAI CASTG 5 cut(s) 346, 649, 946, 1252, 1485
TseFI GTSAC 1 cut(s) 479
TseI GCWGC 1 cut(s) 146
Tsp45I GTSAC 1 cut(s) 479
TspDTI ATGAA 4 cut(s) 308, 927, 941, 1476
TspGWI ACGGA 4 cut(s) 203, 464, 1156, 1246
TspRI CASTG 5 cut(s) 346, 649, 946, 1252, 1485
Tth111I GACNNNGTC 1 cut(s) 477
Vha464I CTTAAG 2 cut(s) 437, 500
VneI GTGCAC 1 cut(s) 116
VpaK11BI GGWCC 3 cut(s) 228, 574, 1435
XagI CCTNNNNNAGG 1 cut(s) 386
XapI RAATTY 3 cut(s) 416, 914, 1101
XceI RCATGY 2 cut(s) 1023, 1070
XmnI GAANNNNTTC 1 cut(s) 522
XspI CTAG 2 cut(s) 476, 669
ZrmI AGTACT 1 cut(s) 787
Zsp2I ATGCAT 1 cut(s) 73
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.