TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1127, 1322 |
| Acc16I | TGCGCA | 1 cut(s) | 417 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2776 |
| AccII | CGCG | 1 cut(s) | 228 |
| AccIII | TCCGGA | 1 cut(s) | 2239 |
| AciI | CCGC | 7 cut(s) | 226, 255, 931, 1310, 1547, 1800, 4003 |
| AclI | AACGTT | 1 cut(s) | 541 |
| AclWI | GGATC | 4 cut(s) | 473, 3400, 3413, 3610 |
| AcuI | CTGAAG | 6 cut(s) | 855, 1199, 1742, 1883, 1911, 2696 |
| AcvI | CACGTG | 1 cut(s) | 3844 |
| AdeI | CACNNNGTG | 2 cut(s) | 399, 3517 |
| AfaI | GTAC | 9 cut(s) | 492, 939, 1027, 1035, 1719, 1833, 1883, 3300, 3366 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 114, 121, 992, 2776, 3877 |
| AflII | CTTAAG | 1 cut(s) | 1151 |
| AflIII | ACRYGT | 1 cut(s) | 3843 |
| AjnI | CCWGG | 3 cut(s) | 717, 2334, 3292 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 1062, 1068, 1094, 1100, 2934, 2966 |
| AleI | CACNNNNGTG | 1 cut(s) | 3909 |
| Alw21I | GWGCWC | 4 cut(s) | 570, 3291, 3592, 3886 |
| AlwI | GGATC | 4 cut(s) | 473, 3400, 3413, 3610 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1739, 2282 |
| Aor13HI | TCCGGA | 1 cut(s) | 2239 |
| AoxI | GGCC | 4 cut(s) | 642, 715, 2001, 2035 |
| ApeKI | GCWGC | 8 cut(s) | 581, 596, 1802, 1872, 2376, 2421, 2926, 3006 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 2550, 2582, 3830, 3862 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1212, 1647, 1896 |
| AspA2I | CCTAGG | 1 cut(s) | 2453 |
| AspLEI | GCGC | 1 cut(s) | 418 |
| AspS9I | GGNCC | 3 cut(s) | 715, 2002, 3838 |
| AsuC2I | CCSGG | 3 cut(s) | 115, 1674, 3561 |
| AsuHPI | GGTGA | 9 cut(s) | 229, 765, 839, 1100, 2324, 2791, 3538, 3806, 3818 |
| AsuII | TTCGAA | 1 cut(s) | 3487 |
| AsuNHI | GCTAGC | 1 cut(s) | 1312 |
| AvaII | GGWCC | 1 cut(s) | 3838 |
| AvrII | CCTAGG | 1 cut(s) | 2453 |
| BaeGI | GKGCMC | 1 cut(s) | 462 |
| BamHI | GGATCC | 1 cut(s) | 3405 |
| BanII | GRGCYC | 4 cut(s) | 1334, 1674, 3291, 3592 |
| BbrPI | CACGTG | 1 cut(s) | 3844 |
| BbsI | GAAGAC | 2 cut(s) | 1889, 3614 |
| Bbv12I | GWGCWC | 4 cut(s) | 570, 3291, 3592, 3886 |
| BbvI | GCAGC | 8 cut(s) | 568, 608, 1814, 1884, 2363, 2408, 2913, 3018 |
| BceAI | ACGGC | 2 cut(s) | 487, 3519 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2545, 2579 |
| BciT130I | CCWGG | 3 cut(s) | 719, 2336, 3294 |
| BciVI | GTATCC | 2 cut(s) | 1934, 3201 |
| BclI | TGATCA | 2 cut(s) | 2061, 3946 |
| BcnI | CCSGG | 3 cut(s) | 115, 1674, 3561 |
| BfaI | CTAG | 9 cut(s) | 332, 425, 1082, 1134, 1313, 1607, 1854, 2454, 2888 |
| BfmI | CTRYAG | 3 cut(s) | 990, 2377, 2842 |
| BfrI | CTTAAG | 1 cut(s) | 1151 |
| BfuI | GTATCC | 2 cut(s) | 1934, 3201 |
| BglII | AGATCT | 5 cut(s) | 967, 1839, 2101, 2968, 3181 |
| BisI | GCNGC | 8 cut(s) | 582, 597, 1803, 1873, 2377, 2422, 2927, 3007 |
| BlnI | CCTAGG | 1 cut(s) | 2453 |
| BlsI | GCNGC | 8 cut(s) | 583, 598, 1804, 1874, 2378, 2423, 2928, 3008 |
| BmcAI | AGTACT | 1 cut(s) | 1833 |
| Bme1390I | CCNGG | 6 cut(s) | 115, 719, 1674, 2336, 3294, 3561 |
| Bme18I | GGWCC | 1 cut(s) | 3838 |
| BmgT120I | GGNCC | 3 cut(s) | 715, 2002, 3838 |
| BmiI | GGNNCC | 7 cut(s) | 76, 1333, 1671, 2661, 2874, 3193, 3407 |
| BmrFI | CCNGG | 6 cut(s) | 115, 719, 1674, 2336, 3294, 3561 |
| BmrI | ACTGGG | 1 cut(s) | 1942 |
| BmsI | GCATC | 8 cut(s) | 508, 607, 1156, 2207, 3018, 3228, 3515, 3932 |
| BmtI | GCTAGC | 1 cut(s) | 1316 |
| BmuI | ACTGGG | 1 cut(s) | 1942 |
| BpiI | GAAGAC | 2 cut(s) | 1889, 3614 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 1002, 1034, 1694, 1726, 2408, 2440 |
| BpmI | CTGGAG | 2 cut(s) | 1856, 3353 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3285 |
| Bpu14I | TTCGAA | 1 cut(s) | 3487 |
| BpuEI | CTTGAG | 5 cut(s) | 320, 554, 2381, 2624, 3011 |
| BpuMI | CCSGG | 3 cut(s) | 115, 1674, 3561 |
| BsaAI | YACGTR | 2 cut(s) | 3173, 3844 |
| BsaBI | GATNNNNATC | 2 cut(s) | 3614, 3724 |
| BsaJI | CCNNGG | 5 cut(s) | 2453, 3195, 3292, 3293, 3802 |
| BsaWI | WCCGGW | 1 cut(s) | 2239 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 3273, 3303, 3326, 3356 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 114, 121, 992, 2776, 3877 |
| Bse118I | RCCGGY | 1 cut(s) | 644 |
| Bse1I | ACTGG | 4 cut(s) | 1644, 1839, 1937, 2626 |
| Bse3DI | GCAATG | 4 cut(s) | 1664, 1749, 2498, 3823 |
| Bse8I | GATNNNNATC | 2 cut(s) | 3614, 3724 |
| BseAI | TCCGGA | 1 cut(s) | 2239 |
| BseBI | CCWGG | 3 cut(s) | 719, 2336, 3294 |
| BseDI | CCNNGG | 5 cut(s) | 2453, 3195, 3292, 3293, 3802 |
| BseJI | GATNNNNATC | 2 cut(s) | 3614, 3724 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 114, 121, 992, 2776, 3877 |
| BseMI | GCAATG | 4 cut(s) | 1664, 1749, 2498, 3823 |
| BseMII | CTCAG | 8 cut(s) | 1033, 1817, 2102, 2201, 3130, 3276, 3371, 3909 |
| BseNI | ACTGG | 4 cut(s) | 1644, 1839, 1937, 2626 |
| BseRI | GAGGAG | 3 cut(s) | 914, 1682, 1715 |
| BseSI | GKGCMC | 1 cut(s) | 462 |
| BseXI | GCAGC | 8 cut(s) | 568, 608, 1814, 1884, 2363, 2408, 2913, 3018 |
| BsgI | GTGCAG | 1 cut(s) | 1891 |
| Bsh1236I | CGCG | 1 cut(s) | 228 |
| Bsh1285I | CGRYCG | 1 cut(s) | 363 |
| BshFI | GGCC | 4 cut(s) | 644, 717, 2003, 2037 |
| BsiEI | CGRYCG | 1 cut(s) | 363 |
| BsiHKAI | GWGCWC | 4 cut(s) | 570, 3291, 3592, 3886 |
| BsiSI | CCGG | 6 cut(s) | 115, 645, 1299, 1674, 2240, 3560 |
| BslFI | GGGAC | 5 cut(s) | 649, 1650, 2497, 2622, 2984 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 114, 121, 992, 2776, 3877 |
| BsmBI | CGTCTC | 1 cut(s) | 2747 |
| BsmFI | GGGAC | 5 cut(s) | 649, 1650, 2497, 2622, 2984 |
| BsmI | GAATGC | 4 cut(s) | 434, 1757, 2645, 3457 |
| BsnI | GGCC | 4 cut(s) | 644, 717, 2003, 2037 |
| Bsp119I | TTCGAA | 1 cut(s) | 3487 |
| Bsp1286I | GDGCHC | 7 cut(s) | 462, 570, 1334, 1674, 3291, 3592, 3886 |
| Bsp13I | TCCGGA | 1 cut(s) | 2239 |
| Bsp1407I | TGTACA | 1 cut(s) | 3364 |
| Bsp19I | CCATGG | 1 cut(s) | 3195 |
| BspACI | CCGC | 7 cut(s) | 226, 255, 931, 1310, 1547, 1800, 4003 |
| BspANI | GGCC | 4 cut(s) | 644, 717, 2003, 2037 |
| BspCNI | CTCAG | 8 cut(s) | 1032, 1818, 2103, 2202, 3129, 3277, 3370, 3910 |
| BspEI | TCCGGA | 1 cut(s) | 2239 |
| BspFNI | CGCG | 1 cut(s) | 228 |
| BspHI | TCATGA | 1 cut(s) | 3952 |
| BspLI | GGNNCC | 7 cut(s) | 76, 1333, 1671, 2661, 2874, 3193, 3407 |
| BspMAI | CTGCAG | 1 cut(s) | 2381 |
| BspOI | GCTAGC | 1 cut(s) | 1316 |
| BspPI | GGATC | 4 cut(s) | 473, 3400, 3413, 3610 |
| BspQI | GCTCTTC | 3 cut(s) | 1218, 2786, 3906 |
| BspT104I | TTCGAA | 1 cut(s) | 3487 |
| BspTI | CTTAAG | 1 cut(s) | 1151 |
| BsrDI | GCAATG | 4 cut(s) | 1664, 1749, 2498, 3823 |
| BsrFI | RCCGGY | 1 cut(s) | 644 |
| BsrGI | TGTACA | 1 cut(s) | 3364 |
| BsrI | ACTGG | 4 cut(s) | 1644, 1839, 1937, 2626 |
| BssAI | RCCGGY | 1 cut(s) | 644 |
| BssECI | CCNNGG | 5 cut(s) | 2453, 3195, 3292, 3293, 3802 |
| BssT1I | CCWWGG | 3 cut(s) | 2453, 3195, 3802 |
| Bst2UI | CCWGG | 3 cut(s) | 719, 2336, 3294 |
| Bst4CI | ACNGT | 9 cut(s) | 554, 592, 790, 1033, 1406, 2009, 3026, 3789, 3979 |
| Bst6I | CTCTTC | 6 cut(s) | 115, 1218, 1911, 2786, 3675, 3906 |
| BstAFI | CTTAAG | 1 cut(s) | 1151 |
| BstAUI | TGTACA | 1 cut(s) | 3364 |
| BstBAI | YACGTR | 2 cut(s) | 3173, 3844 |
| BstBI | TTCGAA | 1 cut(s) | 3487 |
| BstC8I | GCNNGC | 6 cut(s) | 49, 1233, 1314, 2387, 3217, 3457 |
| BstDSI | CCRYGG | 1 cut(s) | 3195 |
| BstFNI | CGCG | 1 cut(s) | 228 |
| BstHHI | GCGC | 1 cut(s) | 418 |
| BstMCI | CGRYCG | 1 cut(s) | 363 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 2382, 3156 |
| BstNI | CCWGG | 3 cut(s) | 719, 2336, 3294 |
| BstNSI | RCATGY | 1 cut(s) | 1485 |
| BstSCI | CCNGG | 6 cut(s) | 113, 717, 1672, 2334, 3292, 3559 |
| BstSFI | CTRYAG | 3 cut(s) | 990, 2377, 2842 |
| BstSLI | GKGCMC | 1 cut(s) | 462 |
| BstUI | CGCG | 1 cut(s) | 228 |
| BstV1I | GCAGC | 8 cut(s) | 568, 608, 1814, 1884, 2363, 2408, 2913, 3018 |
| BstV2I | GAAGAC | 2 cut(s) | 1889, 3614 |
| BstX2I | RGATCY | 8 cut(s) | 478, 967, 1839, 2101, 2968, 3181, 3405, 3602 |
| BstYI | RGATCY | 8 cut(s) | 478, 967, 1839, 2101, 2968, 3181, 3405, 3602 |
| BsuI | GTATCC | 2 cut(s) | 1934, 3201 |
| BsuRI | GGCC | 4 cut(s) | 644, 717, 2003, 2037 |
| BtgI | CCRYGG | 1 cut(s) | 3195 |
| BtsI | GCAGTG | 1 cut(s) | 1345 |
| BtsIMutI | CAGTG | 6 cut(s) | 786, 1345, 1930, 2619, 3915, 3984 |
| Cac8I | GCNNGC | 6 cut(s) | 49, 1233, 1314, 2387, 3217, 3457 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1739, 2282 |
| CciI | TCATGA | 1 cut(s) | 3952 |
| CfoI | GCGC | 1 cut(s) | 418 |
| Cfr10I | RCCGGY | 1 cut(s) | 644 |
| Cfr13I | GGNCC | 3 cut(s) | 715, 2002, 3838 |
| CseI | GACGC | 1 cut(s) | 3485 |
| Csp6I | GTAC | 9 cut(s) | 491, 938, 1026, 1034, 1718, 1832, 1882, 3299, 3365 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1266, 1301 |
| CviQI | GTAC | 9 cut(s) | 491, 938, 1026, 1034, 1718, 1832, 1882, 3299, 3365 |
| DraI | TTTAAA | 3 cut(s) | 1240, 2055, 3021 |
| DraIII | CACNNNGTG | 2 cut(s) | 399, 3517 |
| Eam1104I | CTCTTC | 6 cut(s) | 115, 1218, 1911, 2786, 3675, 3906 |
| EarI | CTCTTC | 6 cut(s) | 115, 1218, 1911, 2786, 3675, 3906 |
| EciI | GGCGGA | 1 cut(s) | 3992 |
| Ecl136II | GAGCTC | 2 cut(s) | 3289, 3590 |
| Eco130I | CCWWGG | 3 cut(s) | 2453, 3195, 3802 |
| Eco24I | GRGCYC | 4 cut(s) | 1334, 1674, 3291, 3592 |
| Eco32I | GATATC | 2 cut(s) | 604, 2341 |
| Eco47I | GGWCC | 1 cut(s) | 3838 |
| Eco53kI | GAGCTC | 2 cut(s) | 3289, 3590 |
| Eco57I | CTGAAG | 6 cut(s) | 855, 1199, 1742, 1883, 1911, 2696 |
| Eco72I | CACGTG | 1 cut(s) | 3844 |
| EcoICRI | GAGCTC | 2 cut(s) | 3289, 3590 |
| EcoO109I | RGGNCCY | 1 cut(s) | 715 |
| EcoRI | GAATTC | 1 cut(s) | 39 |
| EcoRII | CCWGG | 3 cut(s) | 717, 2334, 3292 |
| EcoRV | GATATC | 2 cut(s) | 604, 2341 |
| EcoT14I | CCWWGG | 3 cut(s) | 2453, 3195, 3802 |
| EcoT22I | ATGCAT | 4 cut(s) | 523, 767, 1617, 1757 |
| EcoT38I | GRGCYC | 4 cut(s) | 1334, 1674, 3291, 3592 |
| ErhI | CCWWGG | 3 cut(s) | 2453, 3195, 3802 |
| Esp3I | CGTCTC | 1 cut(s) | 2747 |
| FaqI | GGGAC | 5 cut(s) | 649, 1650, 2497, 2622, 2984 |
| FauI | CCCGC | 3 cut(s) | 233, 1540, 1807 |
| FauNDI | CATATG | 1 cut(s) | 2585 |
| FbaI | TGATCA | 2 cut(s) | 2061, 3946 |
| Fnu4HI | GCNGC | 8 cut(s) | 582, 597, 1803, 1873, 2377, 2422, 2927, 3007 |
| FriOI | GRGCYC | 4 cut(s) | 1334, 1674, 3291, 3592 |
| Fsp4HI | GCNGC | 8 cut(s) | 582, 597, 1803, 1873, 2377, 2422, 2927, 3007 |
| FspBI | CTAG | 9 cut(s) | 332, 425, 1082, 1134, 1313, 1607, 1854, 2454, 2888 |
| FspI | TGCGCA | 1 cut(s) | 417 |
| GlaI | GCGC | 1 cut(s) | 417 |
| GluI | GCNGC | 8 cut(s) | 582, 597, 1803, 1873, 2377, 2422, 2927, 3007 |
| GsuI | CTGGAG | 2 cut(s) | 1856, 3353 |
| HaeIII | GGCC | 4 cut(s) | 644, 717, 2003, 2037 |
| HapII | CCGG | 6 cut(s) | 115, 645, 1299, 1674, 2240, 3560 |
| HgaI | GACGC | 1 cut(s) | 3485 |
| HhaI | GCGC | 1 cut(s) | 418 |
| Hin6I | GCGC | 1 cut(s) | 416 |
| HinP1I | GCGC | 1 cut(s) | 416 |
| HincII | GTYRAC | 2 cut(s) | 220, 1990 |
| HindII | GTYRAC | 2 cut(s) | 220, 1990 |
| HindIII | AAGCTT | 4 cut(s) | 296, 353, 2987, 3228 |
| HpaI | GTTAAC | 1 cut(s) | 1990 |
| HpaII | CCGG | 6 cut(s) | 115, 645, 1299, 1674, 2240, 3560 |
| HphI | GGTGA | 9 cut(s) | 229, 765, 839, 1100, 2324, 2791, 3538, 3806, 3818 |
| Hpy166II | GTNNAC | 2 cut(s) | 220, 1990 |
| Hpy8I | GTNNAC | 2 cut(s) | 220, 1990 |
| Hpy99I | CGWCG | 1 cut(s) | 3505 |
| HpyCH4III | ACNGT | 9 cut(s) | 554, 592, 790, 1033, 1406, 2009, 3026, 3789, 3979 |
| HpyCH4IV | ACGT | 6 cut(s) | 541, 2884, 3164, 3172, 3301, 3843 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 2382, 3156 |
| HpySE526I | ACGT | 6 cut(s) | 541, 2884, 3164, 3172, 3301, 3843 |
| HspAI | GCGC | 1 cut(s) | 416 |
| Kpn2I | TCCGGA | 1 cut(s) | 2239 |
| Ksp22I | TGATCA | 2 cut(s) | 2061, 3946 |
| KspAI | GTTAAC | 1 cut(s) | 1990 |
| LguI | GCTCTTC | 3 cut(s) | 1218, 2786, 3906 |
| LmnI | GCTCC | 8 cut(s) | 1337, 1669, 2446, 2659, 2872, 3294, 3587, 3881 |
| Lsp1109I | GCAGC | 8 cut(s) | 568, 608, 1814, 1884, 2363, 2408, 2913, 3018 |
| LweI | GCATC | 8 cut(s) | 508, 607, 1156, 2207, 3018, 3228, 3515, 3932 |
| MaeI | CTAG | 9 cut(s) | 332, 425, 1082, 1134, 1313, 1607, 1854, 2454, 2888 |
| MaeII | ACGT | 6 cut(s) | 541, 2884, 3164, 3172, 3301, 3843 |
| MaeIII | GTNAC | 3 cut(s) | 1433, 3544, 3913 |
| MfeI | CAATTG | 4 cut(s) | 1070, 1376, 2511, 3942 |
| MflI | RGATCY | 8 cut(s) | 478, 967, 1839, 2101, 2968, 3181, 3405, 3602 |
| MhlI | GDGCHC | 7 cut(s) | 462, 570, 1334, 1674, 3291, 3592, 3886 |
| MlyI | GAGTC | 7 cut(s) | 846, 911, 1241, 2122, 2791, 3349, 4008 |
| MmeI | TCCRAC | 1 cut(s) | 703 |
| Mph1103I | ATGCAT | 4 cut(s) | 523, 767, 1617, 1757 |
| MroI | TCCGGA | 1 cut(s) | 2239 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1212, 1647, 1896 |
| MslI | CAYNNNNRTG | 3 cut(s) | 760, 1997, 3909 |
| MspCI | CTTAAG | 1 cut(s) | 1151 |
| MspI | CCGG | 6 cut(s) | 115, 645, 1299, 1674, 2240, 3560 |
| MspR9I | CCNGG | 6 cut(s) | 115, 719, 1674, 2336, 3294, 3561 |
| MunI | CAATTG | 4 cut(s) | 1070, 1376, 2511, 3942 |
| Mva1269I | GAATGC | 4 cut(s) | 434, 1757, 2645, 3457 |
| MvaI | CCWGG | 3 cut(s) | 719, 2336, 3294 |
| MvnI | CGCG | 1 cut(s) | 228 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 2382, 3156 |
| NciI | CCSGG | 3 cut(s) | 115, 1674, 3561 |
| NcoI | CCATGG | 1 cut(s) | 3195 |
| NdeI | CATATG | 1 cut(s) | 2585 |
| NheI | GCTAGC | 1 cut(s) | 1312 |
| NlaIV | GGNNCC | 7 cut(s) | 76, 1333, 1671, 2661, 2874, 3193, 3407 |
| NmeAIII | GCCGAG | 1 cut(s) | 3214 |
| NmuCI | GTSAC | 2 cut(s) | 3544, 3913 |
| NsbI | TGCGCA | 1 cut(s) | 417 |
| NsiI | ATGCAT | 4 cut(s) | 523, 767, 1617, 1757 |
| NspI | RCATGY | 1 cut(s) | 1485 |
| NspV | TTCGAA | 1 cut(s) | 3487 |
| OliI | CACNNNNGTG | 1 cut(s) | 3909 |
| PagI | TCATGA | 1 cut(s) | 3952 |
| PasI | CCCWGGG | 1 cut(s) | 3293 |
| PciSI | GCTCTTC | 3 cut(s) | 1218, 2786, 3906 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1105, 1114 |
| PctI | GAATGC | 4 cut(s) | 434, 1757, 2645, 3457 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1212, 1647, 1896 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2776 |
| PfoI | TCCNGGA | 2 cut(s) | 113, 3559 |
| PkrI | GCNGC | 8 cut(s) | 583, 598, 1804, 1874, 2378, 2423, 2928, 3008 |
| PleI | GAGTC | 7 cut(s) | 846, 910, 1241, 2121, 2790, 3349, 4007 |
| PmaCI | CACGTG | 1 cut(s) | 3844 |
| PmlI | CACGTG | 1 cut(s) | 3844 |
| PpsI | GAGTC | 7 cut(s) | 846, 910, 1241, 2121, 2790, 3349, 4007 |
| Ppu21I | YACGTR | 2 cut(s) | 3173, 3844 |
| PsiI | TTATAA | 2 cut(s) | 1127, 1322 |
| Psp124BI | GAGCTC | 2 cut(s) | 3291, 3592 |
| Psp1406I | AACGTT | 1 cut(s) | 541 |
| Psp6I | CCWGG | 3 cut(s) | 717, 2334, 3292 |
| PspCI | CACGTG | 1 cut(s) | 3844 |
| PspGI | CCWGG | 3 cut(s) | 717, 2334, 3292 |
| PspN4I | GGNNCC | 7 cut(s) | 76, 1333, 1671, 2661, 2874, 3193, 3407 |
| PspPI | GGNCC | 3 cut(s) | 715, 2002, 3838 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1026, 1058 |
| PstI | CTGCAG | 1 cut(s) | 2381 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1739, 2282 |
| PsuI | RGATCY | 8 cut(s) | 478, 967, 1839, 2101, 2968, 3181, 3405, 3602 |
| RsaI | GTAC | 9 cut(s) | 492, 939, 1027, 1035, 1719, 1833, 1883, 3300, 3366 |
| RsaNI | GTAC | 9 cut(s) | 491, 938, 1026, 1034, 1718, 1832, 1882, 3299, 3365 |
| RseI | CAYNNNNRTG | 3 cut(s) | 760, 1997, 3909 |
| SacI | GAGCTC | 2 cut(s) | 3291, 3592 |
| SapI | GCTCTTC | 3 cut(s) | 1218, 2786, 3906 |
| SatI | GCNGC | 8 cut(s) | 582, 597, 1803, 1873, 2377, 2422, 2927, 3007 |
| Sau96I | GGNCC | 3 cut(s) | 715, 2002, 3838 |
| ScaI | AGTACT | 1 cut(s) | 1833 |
| SchI | GAGTC | 7 cut(s) | 846, 911, 1241, 2122, 2791, 3349, 4008 |
| ScrFI | CCNGG | 6 cut(s) | 115, 719, 1674, 2336, 3294, 3561 |
| SduI | GDGCHC | 7 cut(s) | 462, 570, 1334, 1674, 3291, 3592, 3886 |
| SfaNI | GCATC | 8 cut(s) | 508, 607, 1156, 2207, 3018, 3228, 3515, 3932 |
| SfcI | CTRYAG | 3 cut(s) | 990, 2377, 2842 |
| SfuI | TTCGAA | 1 cut(s) | 3487 |
| SinI | GGWCC | 1 cut(s) | 3838 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 760, 1997, 3909 |
| SmlI | CTYRAG | 6 cut(s) | 299, 569, 1151, 2360, 2603, 2990 |
| SmoI | CTYRAG | 6 cut(s) | 299, 569, 1151, 2360, 2603, 2990 |
| SsiI | CCGC | 7 cut(s) | 226, 255, 931, 1310, 1547, 1800, 4003 |
| SspI | AATATT | 2 cut(s) | 976, 1955 |
| SspMI | CTAG | 9 cut(s) | 332, 425, 1082, 1134, 1313, 1607, 1854, 2454, 2888 |
| SstI | GAGCTC | 2 cut(s) | 3291, 3592 |
| StyD4I | CCNGG | 6 cut(s) | 113, 717, 1672, 2334, 3292, 3559 |
| StyI | CCWWGG | 3 cut(s) | 2453, 3195, 3802 |
| TaaI | ACNGT | 9 cut(s) | 554, 592, 790, 1033, 1406, 2009, 3026, 3789, 3979 |
| TaiI | ACGT | 6 cut(s) | 544, 2887, 3167, 3175, 3304, 3846 |
| TaqII | GACCGA | 1 cut(s) | 349 |
| TatI | WGTACW | 4 cut(s) | 937, 1717, 1831, 3364 |
| TscAI | CASTG | 6 cut(s) | 793, 1352, 1937, 2626, 3922, 3984 |
| TseFI | GTSAC | 2 cut(s) | 3544, 3913 |
| TseI | GCWGC | 8 cut(s) | 581, 596, 1802, 1872, 2376, 2421, 2926, 3006 |
| Tsp45I | GTSAC | 2 cut(s) | 3544, 3913 |
| TspGWI | ACGGA | 2 cut(s) | 459, 2963 |
| TspRI | CASTG | 6 cut(s) | 793, 1352, 1937, 2626, 3922, 3984 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2776 |
| Vha464I | CTTAAG | 1 cut(s) | 1151 |
| VpaK11BI | GGWCC | 1 cut(s) | 3838 |
| XbaI | TCTAGA | 2 cut(s) | 331, 2887 |
| XceI | RCATGY | 1 cut(s) | 1485 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 400, 3300 |
| XmaJI | CCTAGG | 1 cut(s) | 2453 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1212, 1647, 1896 |
| XspI | CTAG | 9 cut(s) | 332, 425, 1082, 1134, 1313, 1607, 1854, 2454, 2888 |
| ZrmI | AGTACT | 1 cut(s) | 1833 |
| Zsp2I | ATGCAT | 4 cut(s) | 523, 767, 1617, 1757 |