RESISTANCE protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 782, 902 |
| AarI | CACCTGC | 1 cut(s) | 181 |
| Acc16I | TGCGCA | 2 cut(s) | 27, 267 |
| Acc36I | ACCTGC | 1 cut(s) | 181 |
| Acc65I | GGTACC | 1 cut(s) | 3613 |
| AccB1I | GGYRCC | 2 cut(s) | 3613, 3759 |
| AccBSI | CCGCTC | 1 cut(s) | 3757 |
| AccI | GTMKAC | 2 cut(s) | 2569, 3585 |
| AccII | CGCG | 6 cut(s) | 531, 1277, 3611, 3631, 3639, 3658 |
| AccIII | TCCGGA | 2 cut(s) | 2580, 2989 |
| AclI | AACGTT | 1 cut(s) | 391 |
| AclWI | GGATC | 6 cut(s) | 323, 758, 2853, 3238, 3251, 3370 |
| AcoI | YGGCCR | 2 cut(s) | 3589, 3601 |
| AcsI | RAATTY | 5 cut(s) | 1101, 1604, 2432, 3027, 3496 |
| AcuI | CTGAAG | 3 cut(s) | 995, 3117, 3465 |
| AcyI | GRCGYC | 1 cut(s) | 3760 |
| AdeI | CACNNNGTG | 2 cut(s) | 3277, 3640 |
| AfaI | GTAC | 7 cut(s) | 41, 342, 1513, 3002, 3287, 3564, 3615 |
| AfeI | AGCGCT | 1 cut(s) | 1113 |
| AflII | CTTAAG | 1 cut(s) | 2333 |
| AflIII | ACRYGT | 2 cut(s) | 1592, 2382 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3695 |
| AjiI | CACGTC | 3 cut(s) | 1593, 2650, 3785 |
| AjnI | CCWGG | 5 cut(s) | 883, 1489, 1795, 2491, 3693 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 843, 875, 2451, 2483 |
| Alw21I | GWGCWC | 3 cut(s) | 411, 1154, 1674 |
| Alw26I | GTCTC | 9 cut(s) | 1380, 1807, 2059, 2255, 2306, 2504, 2562, 3343, 3572 |
| Alw44I | GTGCAC | 1 cut(s) | 1670 |
| AlwI | GGATC | 6 cut(s) | 323, 758, 2853, 3238, 3251, 3370 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2813 |
| Ama87I | CYCGRG | 5 cut(s) | 587, 1633, 3016, 3333, 3721 |
| Aor13HI | TCCGGA | 2 cut(s) | 2580, 2989 |
| Aor51HI | AGCGCT | 1 cut(s) | 1113 |
| AoxI | GGCC | 8 cut(s) | 472, 1636, 1727, 1828, 3589, 3601, 3622, 3724 |
| ApaLI | GTGCAC | 1 cut(s) | 1670 |
| ApeKI | GCWGC | 7 cut(s) | 365, 368, 1094, 1876, 2310, 3772, 3775 |
| ApoI | RAATTY | 5 cut(s) | 1101, 1604, 2432, 3027, 3496 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2280, 2312 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 618, 1008, 1190, 1698, 1977 |
| Asp718I | GGTACC | 1 cut(s) | 3613 |
| AspA2I | CCTAGG | 1 cut(s) | 1838 |
| AspLEI | GCGC | 9 cut(s) | 28, 268, 1114, 1500, 2736, 3611, 3633, 3660, 3762 |
| AspS9I | GGNCC | 9 cut(s) | 808, 881, 1636, 2106, 3309, 3449, 3667, 3697, 3724 |
| AsuC2I | CCSGG | 4 cut(s) | 1517, 3722, 3723, 3743 |
| AsuHPI | GGTGA | 7 cut(s) | 875, 1634, 3052, 3185, 3212, 3316, 3424 |
| AvaI | CYCGRG | 5 cut(s) | 587, 1633, 3016, 3333, 3721 |
| AvaII | GGWCC | 7 cut(s) | 808, 881, 2106, 3309, 3449, 3667, 3697 |
| AvrII | CCTAGG | 1 cut(s) | 1838 |
| BaeGI | GKGCMC | 1 cut(s) | 1674 |
| BamHI | GGATCC | 1 cut(s) | 3243 |
| BanI | GGYRCC | 2 cut(s) | 3613, 3759 |
| BbsI | GAAGAC | 1 cut(s) | 2810 |
| Bbv12I | GWGCWC | 3 cut(s) | 411, 1154, 1674 |
| BbvI | GCAGC | 7 cut(s) | 355, 377, 1081, 1888, 2297, 3784, 3787 |
| BccI | CCATC | 5 cut(s) | 769, 1762, 2132, 2693, 3248 |
| BceAI | ACGGC | 4 cut(s) | 3372, 3604, 3637, 3657 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 3362, 3396, 3515, 3549 |
| BciT130I | CCWGG | 5 cut(s) | 885, 1491, 1797, 2493, 3695 |
| BclI | TGATCA | 3 cut(s) | 865, 3676, 3798 |
| BcnI | CCSGG | 4 cut(s) | 1517, 3722, 3723, 3743 |
| BcoDI | GTCTC | 9 cut(s) | 1380, 1807, 2059, 2255, 2306, 2504, 2562, 3343, 3572 |
| BfaI | CTAG | 6 cut(s) | 848, 909, 1839, 2768, 3398, 3537 |
| BfmI | CTRYAG | 2 cut(s) | 2079, 3770 |
| BfoI | RGCGCY | 3 cut(s) | 1115, 2737, 3763 |
| BfrI | CTTAAG | 1 cut(s) | 2333 |
| BfuAI | ACCTGC | 1 cut(s) | 181 |
| BglII | AGATCT | 1 cut(s) | 1894 |
| BlnI | CCTAGG | 1 cut(s) | 1838 |
| BlpI | GCTNAGC | 1 cut(s) | 3118 |
| Bme1390I | CCNGG | 9 cut(s) | 885, 1491, 1517, 1797, 2493, 3695, 3722, 3723, 3743 |
| Bme18I | GGWCC | 7 cut(s) | 808, 881, 2106, 3309, 3449, 3667, 3697 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3695 |
| BmeT110I | CYCGRG | 5 cut(s) | 587, 1633, 3016, 3333, 3721 |
| BmgBI | CACGTC | 3 cut(s) | 1593, 2650, 3785 |
| BmgT120I | GGNCC | 9 cut(s) | 808, 881, 1636, 2106, 3309, 3449, 3667, 3697, 3724 |
| BmiI | GGNNCC | 8 cut(s) | 1129, 2108, 2391, 2659, 3245, 3615, 3699, 3761 |
| BmrFI | CCNGG | 9 cut(s) | 885, 1491, 1517, 1797, 2493, 3695, 3722, 3723, 3743 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1527 |
| BpiI | GAAGAC | 1 cut(s) | 2810 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 2237, 2269, 3298, 3330 |
| BpmI | CTGGAG | 2 cut(s) | 1793, 2426 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3118 |
| BpuEI | CTTGAG | 3 cut(s) | 395, 523, 1560 |
| BpuMI | CCSGG | 4 cut(s) | 1517, 3722, 3723, 3743 |
| Bsa29I | ATCGAT | 2 cut(s) | 138, 1857 |
| BsaBI | GATNNNNATC | 3 cut(s) | 918, 1385, 3071 |
| BsaHI | GRCGYC | 1 cut(s) | 3760 |
| BsaI | GGTCTC | 3 cut(s) | 2059, 2255, 2562 |
| BsaWI | WCCGGW | 3 cut(s) | 2580, 2989, 3491 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1935, 1965, 2562, 2592, 2739, 2769 |
| Bse1I | ACTGG | 2 cut(s) | 90, 2777 |
| Bse3DI | GCAATG | 4 cut(s) | 1672, 1994, 3385, 3601 |
| Bse8I | GATNNNNATC | 3 cut(s) | 918, 1385, 3071 |
| BseAI | TCCGGA | 2 cut(s) | 2580, 2989 |
| BseBI | CCWGG | 5 cut(s) | 885, 1491, 1797, 2493, 3695 |
| BseCI | ATCGAT | 2 cut(s) | 138, 1857 |
| BseJI | GATNNNNATC | 3 cut(s) | 918, 1385, 3071 |
| BseMI | GCAATG | 4 cut(s) | 1672, 1994, 3385, 3601 |
| BseMII | CTCAG | 8 cut(s) | 737, 1026, 1761, 1773, 1863, 1876, 2696, 3279 |
| BseNI | ACTGG | 2 cut(s) | 90, 2777 |
| BseRI | GAGGAG | 3 cut(s) | 171, 1563, 3674 |
| BseSI | GKGCMC | 1 cut(s) | 1674 |
| BseX3I | CGGCCG | 1 cut(s) | 3589 |
| BseXI | GCAGC | 7 cut(s) | 355, 377, 1081, 1888, 2297, 3784, 3787 |
| BseYI | CCCAGC | 1 cut(s) | 449 |
| BsgI | GTGCAG | 2 cut(s) | 2572, 3530 |
| Bsh1236I | CGCG | 6 cut(s) | 531, 1277, 3611, 3631, 3639, 3658 |
| Bsh1285I | CGRYCG | 2 cut(s) | 3376, 3592 |
| BshFI | GGCC | 8 cut(s) | 474, 1638, 1729, 1830, 3591, 3603, 3624, 3726 |
| BshNI | GGYRCC | 2 cut(s) | 3613, 3759 |
| BshVI | ATCGAT | 2 cut(s) | 138, 1857 |
| BsiEI | CGRYCG | 2 cut(s) | 3376, 3592 |
| BsiHKAI | GWGCWC | 3 cut(s) | 411, 1154, 1674 |
| BsiHKCI | CYCGRG | 5 cut(s) | 587, 1633, 3016, 3333, 3721 |
| BsiSI | CCGG | 8 cut(s) | 1517, 2581, 2990, 3492, 3604, 3708, 3722, 3742 |
| BslFI | GGGAC | 5 cut(s) | 2092, 2227, 2501, 3565, 3683 |
| BsmAI | GTCTC | 9 cut(s) | 1380, 1807, 2059, 2255, 2306, 2504, 2562, 3343, 3572 |
| BsmBI | CGTCTC | 1 cut(s) | 3572 |
| BsmFI | GGGAC | 5 cut(s) | 2092, 2227, 2501, 3565, 3683 |
| BsmI | GAATGC | 3 cut(s) | 284, 539, 2908 |
| BsnI | GGCC | 8 cut(s) | 474, 1638, 1729, 1830, 3591, 3603, 3624, 3726 |
| Bso31I | GGTCTC | 3 cut(s) | 2059, 2255, 2562 |
| BsoBI | CYCGRG | 5 cut(s) | 587, 1633, 3016, 3333, 3721 |
| Bsp1286I | GDGCHC | 3 cut(s) | 411, 1154, 1674 |
| Bsp13I | TCCGGA | 2 cut(s) | 2580, 2989 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3118 |
| Bsp68I | TCGCGA | 1 cut(s) | 531 |
| BspANI | GGCC | 8 cut(s) | 474, 1638, 1729, 1830, 3591, 3603, 3624, 3726 |
| BspCNI | CTCAG | 8 cut(s) | 738, 1027, 1762, 1774, 1864, 1875, 2697, 3278 |
| BspDI | ATCGAT | 2 cut(s) | 138, 1857 |
| BspEI | TCCGGA | 2 cut(s) | 2580, 2989 |
| BspFNI | CGCG | 6 cut(s) | 531, 1277, 3611, 3631, 3639, 3658 |
| BspHI | TCATGA | 1 cut(s) | 997 |
| BspLI | GGNNCC | 8 cut(s) | 1129, 2108, 2391, 2659, 3245, 3615, 3699, 3761 |
| BspMAI | CTGCAG | 1 cut(s) | 3774 |
| BspMI | ACCTGC | 1 cut(s) | 181 |
| BspPI | GGATC | 6 cut(s) | 323, 758, 2853, 3238, 3251, 3370 |
| BspQI | GCTCTTC | 1 cut(s) | 1022 |
| BspT107I | GGYRCC | 2 cut(s) | 3613, 3759 |
| BspTI | CTTAAG | 1 cut(s) | 2333 |
| BspTNI | GGTCTC | 3 cut(s) | 2059, 2255, 2562 |
| BsrBI | CCGCTC | 1 cut(s) | 3757 |
| BsrDI | GCAATG | 4 cut(s) | 1672, 1994, 3385, 3601 |
| BsrI | ACTGG | 2 cut(s) | 90, 2777 |
| BssNI | GRCGYC | 1 cut(s) | 3760 |
| BssT1I | CCWWGG | 5 cut(s) | 1652, 1838, 3247, 3547, 3727 |
| Bst2UI | CCWGG | 5 cut(s) | 885, 1491, 1797, 2493, 3695 |
| Bst4CI | ACNGT | 4 cut(s) | 634, 2171, 2515, 2809 |
| Bst6I | CTCTTC | 3 cut(s) | 1022, 2845, 3722 |
| BstACI | GRCGYC | 1 cut(s) | 3760 |
| BstAFI | CTTAAG | 1 cut(s) | 2333 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 943, 2954 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3299 |
| BstFNI | CGCG | 6 cut(s) | 531, 1277, 3611, 3631, 3639, 3658 |
| BstH2I | RGCGCY | 3 cut(s) | 1115, 2737, 3763 |
| BstHHI | GCGC | 9 cut(s) | 28, 268, 1114, 1500, 2736, 3611, 3633, 3660, 3762 |
| BstMAI | GTCTC | 9 cut(s) | 1380, 1807, 2059, 2255, 2306, 2504, 2562, 3343, 3572 |
| BstMCI | CGRYCG | 2 cut(s) | 3376, 3592 |
| BstNI | CCWGG | 5 cut(s) | 885, 1491, 1797, 2493, 3695 |
| BstNSI | RCATGY | 8 cut(s) | 32, 341, 1332, 2003, 2386, 3161, 3482, 3561 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1527 |
| BstSCI | CCNGG | 9 cut(s) | 883, 1489, 1515, 1795, 2491, 3693, 3720, 3721, 3741 |
| BstSFI | CTRYAG | 2 cut(s) | 2079, 3770 |
| BstSLI | GKGCMC | 1 cut(s) | 1674 |
| BstUI | CGCG | 6 cut(s) | 531, 1277, 3611, 3631, 3639, 3658 |
| BstV1I | GCAGC | 7 cut(s) | 355, 377, 1081, 1888, 2297, 3784, 3787 |
| BstV2I | GAAGAC | 1 cut(s) | 2810 |
| BstX2I | RGATCY | 3 cut(s) | 328, 1894, 3243 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3254 |
| BstYI | RGATCY | 3 cut(s) | 328, 1894, 3243 |
| BstZI | CGGCCG | 1 cut(s) | 3589 |
| Bsu15I | ATCGAT | 2 cut(s) | 138, 1857 |
| BsuRI | GGCC | 8 cut(s) | 474, 1638, 1729, 1830, 3591, 3603, 3624, 3726 |
| BsuTUI | ATCGAT | 2 cut(s) | 138, 1857 |
| BtrI | CACGTC | 3 cut(s) | 1593, 2650, 3785 |
| BtsIMutI | CAGTG | 2 cut(s) | 630, 2814 |
| BtuMI | TCGCGA | 1 cut(s) | 531 |
| BveI | ACCTGC | 1 cut(s) | 181 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2813 |
| CciI | TCATGA | 1 cut(s) | 997 |
| CfoI | GCGC | 9 cut(s) | 28, 268, 1114, 1500, 2736, 3611, 3633, 3660, 3762 |
| Cfr13I | GGNCC | 9 cut(s) | 808, 881, 1636, 2106, 3309, 3449, 3667, 3697, 3724 |
| Cfr9I | CCCGGG | 1 cut(s) | 3721 |
| ClaI | ATCGAT | 2 cut(s) | 138, 1857 |
| Csp6I | GTAC | 7 cut(s) | 40, 341, 1512, 3001, 3286, 3563, 3614 |
| CviQI | GTAC | 7 cut(s) | 40, 341, 1512, 3001, 3286, 3563, 3614 |
| DinI | GGCGCC | 1 cut(s) | 3761 |
| DraI | TTTAAA | 1 cut(s) | 549 |
| DraIII | CACNNNGTG | 2 cut(s) | 3277, 3640 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3695 |
| EaeI | YGGCCR | 2 cut(s) | 3589, 3601 |
| EagI | CGGCCG | 1 cut(s) | 3589 |
| Eam1104I | CTCTTC | 3 cut(s) | 1022, 2845, 3722 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3695 |
| EarI | CTCTTC | 3 cut(s) | 1022, 2845, 3722 |
| EciI | GGCGGA | 3 cut(s) | 2488, 3375, 3659 |
| EclXI | CGGCCG | 1 cut(s) | 3589 |
| Eco130I | CCWWGG | 5 cut(s) | 1652, 1838, 3247, 3547, 3727 |
| Eco31I | GGTCTC | 3 cut(s) | 2059, 2255, 2562 |
| Eco32I | GATATC | 2 cut(s) | 1383, 3073 |
| Eco47I | GGWCC | 7 cut(s) | 808, 881, 2106, 3309, 3449, 3667, 3697 |
| Eco47III | AGCGCT | 1 cut(s) | 1113 |
| Eco52I | CGGCCG | 1 cut(s) | 3589 |
| Eco57I | CTGAAG | 3 cut(s) | 995, 3117, 3465 |
| Eco88I | CYCGRG | 5 cut(s) | 587, 1633, 3016, 3333, 3721 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3299 |
| EcoO109I | RGGNCCY | 1 cut(s) | 808 |
| EcoRI | GAATTC | 1 cut(s) | 1101 |
| EcoRII | CCWGG | 5 cut(s) | 883, 1489, 1795, 2491, 3693 |
| EcoRV | GATATC | 2 cut(s) | 1383, 3073 |
| EcoT14I | CCWWGG | 5 cut(s) | 1652, 1838, 3247, 3547, 3727 |
| EcoT22I | ATGCAT | 5 cut(s) | 605, 921, 1240, 1330, 1434 |
| EgeI | GGCGCC | 1 cut(s) | 3761 |
| EheI | GGCGCC | 1 cut(s) | 3761 |
| ErhI | CCWWGG | 5 cut(s) | 1652, 1838, 3247, 3547, 3727 |
| Esp3I | CGTCTC | 1 cut(s) | 3572 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1550, 1582, 2842, 2874 |
| FaqI | GGGAC | 5 cut(s) | 2092, 2227, 2501, 3565, 3683 |
| FauI | CCCGC | 3 cut(s) | 83, 1090, 3154 |
| FbaI | TGATCA | 3 cut(s) | 865, 3676, 3798 |
| FblI | GTMKAC | 2 cut(s) | 2569, 3585 |
| FspBI | CTAG | 6 cut(s) | 848, 909, 1839, 2768, 3398, 3537 |
| FspI | TGCGCA | 2 cut(s) | 27, 267 |
| GlaI | GCGC | 9 cut(s) | 27, 267, 1113, 1499, 2735, 3610, 3632, 3659, 3761 |
| GsaI | CCCAGC | 1 cut(s) | 453 |
| GsuI | CTGGAG | 2 cut(s) | 1793, 2426 |
| HaeII | RGCGCY | 3 cut(s) | 1115, 2737, 3763 |
| HaeIII | GGCC | 8 cut(s) | 474, 1638, 1729, 1830, 3591, 3603, 3624, 3726 |
| HapII | CCGG | 8 cut(s) | 1517, 2581, 2990, 3492, 3604, 3708, 3722, 3742 |
| HhaI | GCGC | 9 cut(s) | 28, 268, 1114, 1500, 2736, 3611, 3633, 3660, 3762 |
| Hin1I | GRCGYC | 1 cut(s) | 3760 |
| Hin6I | GCGC | 9 cut(s) | 26, 266, 1112, 1498, 2734, 3609, 3631, 3658, 3760 |
| HinP1I | GCGC | 9 cut(s) | 26, 266, 1112, 1498, 2734, 3609, 3631, 3658, 3760 |
| HincII | GTYRAC | 4 cut(s) | 2820, 3139, 3575, 3586 |
| HindII | GTYRAC | 4 cut(s) | 2820, 3139, 3575, 3586 |
| HindIII | AAGCTT | 3 cut(s) | 714, 1985, 2503 |
| HpaI | GTTAAC | 1 cut(s) | 2820 |
| HpaII | CCGG | 8 cut(s) | 1517, 2581, 2990, 3492, 3604, 3708, 3722, 3742 |
| HphI | GGTGA | 7 cut(s) | 875, 1634, 3052, 3185, 3212, 3316, 3424 |
| Hpy99I | CGWCG | 6 cut(s) | 1143, 2542, 2545, 3590, 3783, 3786 |
| HpyCH4III | ACNGT | 4 cut(s) | 634, 2171, 2515, 2809 |
| HpyCH4IV | ACGT | 7 cut(s) | 391, 1592, 2463, 2649, 3565, 3649, 3784 |
| HpySE526I | ACGT | 7 cut(s) | 391, 1592, 2463, 2649, 3565, 3649, 3784 |
| Hsp92I | GRCGYC | 1 cut(s) | 3760 |
| HspAI | GCGC | 9 cut(s) | 26, 266, 1112, 1498, 2734, 3609, 3631, 3658, 3760 |
| KasI | GGCGCC | 1 cut(s) | 3759 |
| Kpn2I | TCCGGA | 2 cut(s) | 2580, 2989 |
| KpnI | GGTACC | 1 cut(s) | 3617 |
| Ksp22I | TGATCA | 3 cut(s) | 865, 3676, 3798 |
| KspAI | GTTAAC | 1 cut(s) | 2820 |
| LguI | GCTCTTC | 1 cut(s) | 1022 |
| LmnI | GCTCC | 6 cut(s) | 953, 1052, 2389, 2670, 3606, 3687 |
| Lsp1109I | GCAGC | 7 cut(s) | 355, 377, 1081, 1888, 2297, 3784, 3787 |
| MaeI | CTAG | 6 cut(s) | 848, 909, 1839, 2768, 3398, 3537 |
| MaeII | ACGT | 7 cut(s) | 391, 1592, 2463, 2649, 3565, 3649, 3784 |
| MaeIII | GTNAC | 3 cut(s) | 1418, 2487, 2786 |
| MbiI | CCGCTC | 1 cut(s) | 3757 |
| MfeI | CAATTG | 3 cut(s) | 1461, 2241, 2881 |
| MflI | RGATCY | 3 cut(s) | 328, 1894, 3243 |
| MhlI | GDGCHC | 3 cut(s) | 411, 1154, 1674 |
| Mly113I | GGCGCC | 1 cut(s) | 3760 |
| MlyI | GAGTC | 6 cut(s) | 599, 690, 1564, 3345, 3684, 3759 |
| MmeI | TCCRAC | 4 cut(s) | 541, 1518, 2367, 3712 |
| Mph1103I | ATGCAT | 5 cut(s) | 605, 921, 1240, 1330, 1434 |
| MroI | TCCGGA | 2 cut(s) | 2580, 2989 |
| MroXI | GAANNNNTTC | 5 cut(s) | 618, 1008, 1190, 1698, 1977 |
| MslI | CAYNNNNRTG | 5 cut(s) | 99, 598, 1026, 1370, 2004 |
| MspA1I | CMGCKG | 4 cut(s) | 368, 1725, 1879, 3664 |
| MspCI | CTTAAG | 1 cut(s) | 2333 |
| MspI | CCGG | 8 cut(s) | 1517, 2581, 2990, 3492, 3604, 3708, 3722, 3742 |
| MspR9I | CCNGG | 9 cut(s) | 885, 1491, 1517, 1797, 2493, 3695, 3722, 3723, 3743 |
| MunI | CAATTG | 3 cut(s) | 1461, 2241, 2881 |
| Mva1269I | GAATGC | 3 cut(s) | 284, 539, 2908 |
| MvaI | CCWGG | 5 cut(s) | 885, 1491, 1797, 2493, 3695 |
| MvnI | CGCG | 6 cut(s) | 531, 1277, 3611, 3631, 3639, 3658 |
| NarI | GGCGCC | 1 cut(s) | 3760 |
| NciI | CCSGG | 4 cut(s) | 1517, 3722, 3723, 3743 |
| NlaIV | GGNNCC | 8 cut(s) | 1129, 2108, 2391, 2659, 3245, 3615, 3699, 3761 |
| NmeAIII | GCCGAG | 1 cut(s) | 2680 |
| NmuCI | GTSAC | 1 cut(s) | 2786 |
| NruI | TCGCGA | 1 cut(s) | 531 |
| NsbI | TGCGCA | 2 cut(s) | 27, 267 |
| NsiI | ATGCAT | 5 cut(s) | 605, 921, 1240, 1330, 1434 |
| NspI | RCATGY | 8 cut(s) | 32, 341, 1332, 2003, 2386, 3161, 3482, 3561 |
| PaeI | GCATGC | 1 cut(s) | 32 |
| PaeR7I | CTCGAG | 2 cut(s) | 587, 3333 |
| PagI | TCATGA | 1 cut(s) | 997 |
| PaqCI | CACCTGC | 1 cut(s) | 181 |
| PciI | ACATGT | 1 cut(s) | 2382 |
| PciSI | GCTCTTC | 1 cut(s) | 1022 |
| PctI | GAATGC | 3 cut(s) | 284, 539, 2908 |
| PdmI | GAANNNNTTC | 5 cut(s) | 618, 1008, 1190, 1698, 1977 |
| PflFI | GACNNNGTC | 1 cut(s) | 2809 |
| Ple19I | CGATCG | 1 cut(s) | 3376 |
| PleI | GAGTC | 6 cut(s) | 598, 690, 1564, 3344, 3684, 3758 |
| PluTI | GGCGCC | 1 cut(s) | 3763 |
| PpsI | GAGTC | 6 cut(s) | 598, 690, 1564, 3344, 3684, 3758 |
| PpuMI | RGGWCCY | 1 cut(s) | 808 |
| PscI | ACATGT | 1 cut(s) | 2382 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1527 |
| PsiI | TTATAA | 2 cut(s) | 782, 902 |
| Psp1406I | AACGTT | 1 cut(s) | 391 |
| Psp5II | RGGWCCY | 1 cut(s) | 808 |
| Psp6I | CCWGG | 5 cut(s) | 883, 1489, 1795, 2491, 3693 |
| PspFI | CCCAGC | 1 cut(s) | 449 |
| PspGI | CCWGG | 5 cut(s) | 883, 1489, 1795, 2491, 3693 |
| PspN4I | GGNNCC | 8 cut(s) | 1129, 2108, 2391, 2659, 3245, 3615, 3699, 3761 |
| PspPI | GGNCC | 9 cut(s) | 808, 881, 1636, 2106, 3309, 3449, 3667, 3697, 3724 |
| PspPPI | RGGWCCY | 1 cut(s) | 808 |
| PspXI | VCTCGAGB | 2 cut(s) | 587, 3333 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 603, 635 |
| PstI | CTGCAG | 1 cut(s) | 3774 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2813 |
| PsuI | RGATCY | 3 cut(s) | 328, 1894, 3243 |
| PsyI | GACNNNGTC | 1 cut(s) | 2809 |
| PvuI | CGATCG | 1 cut(s) | 3376 |
| PvuII | CAGCTG | 4 cut(s) | 368, 1725, 1879, 3664 |
| RruI | TCGCGA | 1 cut(s) | 531 |
| RsaI | GTAC | 7 cut(s) | 41, 342, 1513, 3002, 3287, 3564, 3615 |
| RsaNI | GTAC | 7 cut(s) | 40, 341, 1512, 3001, 3286, 3563, 3614 |
| RseI | CAYNNNNRTG | 5 cut(s) | 99, 598, 1026, 1370, 2004 |
| SalI | GTCGAC | 1 cut(s) | 3584 |
| SapI | GCTCTTC | 1 cut(s) | 1022 |
| Sau96I | GGNCC | 9 cut(s) | 808, 881, 1636, 2106, 3309, 3449, 3667, 3697, 3724 |
| SchI | GAGTC | 6 cut(s) | 599, 690, 1564, 3345, 3684, 3759 |
| ScrFI | CCNGG | 9 cut(s) | 885, 1491, 1517, 1797, 2493, 3695, 3722, 3723, 3743 |
| SduI | GDGCHC | 3 cut(s) | 411, 1154, 1674 |
| SfcI | CTRYAG | 2 cut(s) | 2079, 3770 |
| SfoI | GGCGCC | 1 cut(s) | 3761 |
| Sfr274I | CTCGAG | 2 cut(s) | 587, 3333 |
| SinI | GGWCC | 7 cut(s) | 808, 881, 2106, 3309, 3449, 3667, 3697 |
| SlaI | CTCGAG | 2 cut(s) | 587, 3333 |
| SmaI | CCCGGG | 1 cut(s) | 3723 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 99, 598, 1026, 1370, 2004 |
| SmlI | CTYRAG | 6 cut(s) | 410, 538, 587, 1575, 2333, 3333 |
| SmoI | CTYRAG | 6 cut(s) | 410, 538, 587, 1575, 2333, 3333 |
| SphI | GCATGC | 1 cut(s) | 32 |
| SspDI | GGCGCC | 1 cut(s) | 3759 |
| SspI | AATATT | 1 cut(s) | 1748 |
| SspMI | CTAG | 6 cut(s) | 848, 909, 1839, 2768, 3398, 3537 |
| StyD4I | CCNGG | 9 cut(s) | 883, 1489, 1515, 1795, 2491, 3693, 3720, 3721, 3741 |
| StyI | CCWWGG | 5 cut(s) | 1652, 1838, 3247, 3547, 3727 |
| TaaI | ACNGT | 4 cut(s) | 634, 2171, 2515, 2809 |
| TaiI | ACGT | 7 cut(s) | 394, 1595, 2466, 2652, 3568, 3652, 3787 |
| TaqII | GACCGA | 3 cut(s) | 2533, 3471, 3560 |
| TauI | GCSGC | 3 cut(s) | 107, 3594, 3760 |
| TscAI | CASTG | 2 cut(s) | 637, 2814 |
| TseFI | GTSAC | 1 cut(s) | 2786 |
| TseI | GCWGC | 7 cut(s) | 365, 368, 1094, 1876, 2310, 3772, 3775 |
| Tsp45I | GTSAC | 1 cut(s) | 2786 |
| TspGWI | ACGGA | 5 cut(s) | 1001, 1095, 2526, 2851, 3592 |
| TspMI | CCCGGG | 1 cut(s) | 3721 |
| TspRI | CASTG | 2 cut(s) | 637, 2814 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2809 |
| Vha464I | CTTAAG | 1 cut(s) | 2333 |
| VneI | GTGCAC | 1 cut(s) | 1670 |
| VpaK11BI | GGWCC | 7 cut(s) | 808, 881, 2106, 3309, 3449, 3667, 3697 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3299 |
| XapI | RAATTY | 5 cut(s) | 1101, 1604, 2432, 3027, 3496 |
| XbaI | TCTAGA | 1 cut(s) | 2767 |
| XceI | RCATGY | 8 cut(s) | 32, 341, 1332, 2003, 2386, 3161, 3482, 3561 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2172 |
| XhoI | CTCGAG | 2 cut(s) | 587, 3333 |
| XmaI | CCCGGG | 1 cut(s) | 3721 |
| XmaJI | CCTAGG | 1 cut(s) | 1838 |
| XmiI | GTMKAC | 2 cut(s) | 2569, 3585 |
| XmnI | GAANNNNTTC | 5 cut(s) | 618, 1008, 1190, 1698, 1977 |
| XspI | CTAG | 6 cut(s) | 848, 909, 1839, 2768, 3398, 3537 |
| Zsp2I | ATGCAT | 5 cut(s) | 605, 921, 1240, 1330, 1434 |