Rroxscaffold_7G00178730

RESISTANCE protein

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Forward (+)
18399194 .. 18405733
6540 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00178730.1

Sequence Viewer

Length: 3501 bp
ATGGCTGCTTCTTCTTCTGCTGCTGCTCATGTTCTCCCTCAAGTCAAGTATGATGTCTTTCTTAGTTTTAGTGGTGTAGACACACGCCAGAAATTTACCAGCTATCTTTATGATGCTTTAAAGCGGAGGAAAGTTTATACCTACATGGATGATAGACTTGAAAGAGGAGATGAAATTGAACATGCCCTGGTGGAAGCAATCAAGCAATCAAAGATTTCGGTAATTGTTTTCTCAAAAAACTACGCCTCTTCTAGGTGGTGCTTGAATGAACTTGTGCATATACTGGAATGCAAGCAAAGATATGGACGGATTGTTATACCTGTTTTTTACGAAATAGATCCATCACATGTACGGAAACAAGAGGGGAGTTATGCAGATGCATTTGTAGCTCATGAAGAACGTTTCAAGAACAACATGGACAAAGTGCTCATTTGGAGGAAAGCTGTGTCAACTGCGGCTAATCTATCTGGGTTTCATTCAGAAAATGTCAAGCCCGAGCCTGCATTAGTTGAGAGAATTGTCGATGATATCTTGGCGAAATTAAATCGCAACTCGTCAGCTAGTGTGAGGGGCCTTGTTGGGGTTGAGAGTCAGATTCAACAAATTGAATTGTTGTTATGCATTGAAGCACAAGATGTTGAATTCCGCCTGGTAGGTATTTGGGGTATGGGCGGTATTGGTAAGACCACCCTTGCTGATGCTGTGTATCACCGACTCTCTTCTAAATTCGATACTTGTGCATTTCTTTCCAACGTTAGGGAGGAGTCGGAGAAACGAGGAATACATCATTTGCGTAACGATCTCTTTCGTAAGATATTAATGGACGAAAGTATAAGTATTGACTCTCCATCTATAGGGTCACATTCTGTTTTAGACAGATTGTCTCGTGCAAAGGTCCTCGTGGTTCTTGATGATGTGAATAAATCAGAACAAATAGAATATTTACTCGGACAAGAAGTTGTTTTTGGCCATGGGAGTAGAGTCATTATAACCTCGAGAGATAGGCGCTTATTGATAGAAAAAGTGGAAGCTGATCATATATACAAGGTGATTGGGTTAAATGATGCTGATGCTCTGGAGCTCTTTCATTTGAAAGCTTCCAAAGATGGTGCTTCCAGAATAGATAATACAGACTTGTTAAAAGGGGTGGTAAGTTATGCTGATGGTATCCCATTAGTTCTCAAAGTTTTGGGTTCCTTATTTCGTCACTGCAATAGCGAAAAAGACTGCGAGGACAAGTTGAAAATATTGAAAGGGGATCCTGACAAAAGAACCCAGGATGTGTTAAGAGCAAGTTATAATGGATTACAGAAATACGAGCAAGAGATATTTCTTGATATCGCCTGTTTTTTCAAAGGGGAGAAGAAGCATGATGTTGAAAGACTGATAGAAATGCATGGATTCTGTGCACCGCTCCAGGGAATCACAGTTCTCATTAATATGTCTCTCATATCAATTTCAATGAATGATCGCCTAGAGATGCATGATTTGGTGCAAGACGTGGGTATGTCAATTGCTCGTGAACAATGCACAGAACCGGGAAGACGCAGTAGGCTATGGAGTGCTGAGGATGTCCATCAAATATTGAAATATAGTACTGGAACTGCAACAGTTGAAGCCATGTTTGCTCCAATTTCAAGTCAAGATTTACCGCTGAGTCGTACGAGCTTCACAAATATGTATAACTTACGGTTGCTAAAATTTTATGTACCCGGACACCCACTATTATATTCGCCTGAAAATATACATGAGACTAGAACCGAGTATCCTGAGTGTCTTCCTGAAGGACTTAGATATCTCTCCTGGGATCATTACCTTTTTAAATCCTTGCCATCAAAATTTCTTCCACGTAACCTTGTTGAGCTTCATATGTCCTATAGCCGAATTGAGAAACTCTGGAGTGATGGCAAGATTCTCGGCAGCTTAAAAGTGATAGATCTTAGGTATTCTGGAAGACTTCGTGAGGTTCCAGATCTCTCTGAGAGTCCAATTGAGGTAATAAATCTGAGTCGGTGTCTCAGCTTGACTCAAGTTCCTTCATATTTTAAAAATCTCGACAAGCTTACGTATCTGAATCTTCATGAGTGTATGGCAATAGAAACTTTTCCGGATGCGATGCCCTGCAATTTGGAATTCTTAGATTTGTATAGTTGCGGACACCTGACTAAAGTTCCAGATCTCTCTCGTTGTGCAAATATTGAGAAGATAGATTTCGGTCGGACAAATTTGGTTGAAATTCCTTCATATTTTGAACATCTTGACAAGCTTACTTACCTGAATCTGAGAAGCTGCTCAATGCTGGAATATCTCCCGGAGTTACCATGCAATGTGGAATGCTTATATTTGTCTTATTGTTCAAGATTGAAGAAACTTCCAAATAGCATCTACAAATTAAATCGTCTTGAAACTCTCAATCTTGTGTACTGTCGTACACTAGAAAAATTTCCTCCCTTCTCAGTGGGTTTGTGCTCTTTGAGAAATCTCAACCTCGGTTGCTGCGGGAGGTTTCAAATCCCAGATGGTCTCATTTGCTTATCTTCATTGCACAGTCTGGATCTAGGACAAAGCATGATTGAGAGCATACCTGGAAGCATCAAAAATGTTTCTGGCCTTCGTGAATTGAAGTTAAGTAGATGCGAAAAGCTTCAATCTTTACCAGAGCTCCCACCGCTGCTAGAAATTTTGGAGGCAGATCGCTGCACGTCATTGCAAAGGGTGGCAAGTTCAAGGACTACTGTACATCAATATGAAGATCCTTATTACCGCAAAGAACGTTTTGAGTTTGTTAATTGCGTAAATTTGAATGAGAGTTCAAGGAGCAACATAATGGATGATGCACGGATTAGAATTATGCAAATGGCATCGTCGAAAGTTCATAAAACAAAACATCCGGATCGCTACTCAATGGAGGATTCAGTTAGAGTCATTTACCCGGGAAATGAAATTCCGGAATGGTTCAGCTATCGTGAGGAGGGTTGTTCATTAGAAATTGAGTTTTCTCCAGATTGGTTTCATACGACAGACTTCTTGGGTTTTGCTCTATGCGCTGTTATTGCACAGCCCAGCTTTGAGTTTCAATGTGATTGCATTTATAAAACCAACAATGGTGAAAGCTATAAAGTCTTATTCACAACCATGGGCATGCAAGTGATTATATGTCAGCCTGCAGGTAGATATTGGGGTCATCATGTGTCGGCGTCCTTTACTAAGGGAGAACATATTAGAGCAAGAGGCAGCCCCATTCCTTTCTCAAGGGTCACTAGAGCGTCTTTTCACTTCTACCAAACTATGTCAGAGGGCCAATTGCAGGCTTGTGGGATCCGCTTGTTGCAAGCTCATGATGAAAACAGTGTGTTATCGGATGTGCCTTTGCAGGAGGTGGAACGACCCCAGGGTATGATAAGGGACCCTGATCAGAATGATATTGGAGAAGACCCCATGGATTTTGAAGAAGCCCTAGCCCCTAGAAAGAGAACCTGGGCCATGATGATGATGGAATAA

Protein Analysis

1166

Amino Acids

133.26

Weight (kDa)

6.12

Isoelectric Point (pI)

49.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 16 - 186 1.2e-54 TIR domain
TIR_2 PF13676 19 - 128 4e-16 TIR domain
NB-ARC PF00931 210 - 368 4.8e-17 NB-ARC domain
WHD_ROQ1 PF23282 439 - 509 2.4e-20 Disease resistance protein Roq1-like, winged-helix domain
C-JID PF20160 978 - 1110 4.9e-12 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 989, 1299, 3093
Acc36I ACCTGC 1 cut(s) 3158
AccBSI CCGCTC 1 cut(s) 1414
AccI GTMKAC 1 cut(s) 78
AccIII TCCGGA 3 cut(s) 2107, 2890, 2947
AclI AACGTT 3 cut(s) 400, 753, 2773
AclWI GGATC 9 cut(s) 332, 1253, 1266, 1815, 2562, 2747, 2901, 3313, 3326
AcoI YGGCCR 1 cut(s) 967
AcuI CTGAAG 1 cut(s) 1803
AcyI GRCGYC 1 cut(s) 3197
AfaI GTAC 7 cut(s) 351, 1597, 1663, 1710, 2423, 2431, 2739
AfiI CCNNNNNNNGG 6 cut(s) 252, 580, 756, 854, 1418, 3307
AflIII ACRYGT 1 cut(s) 346
AhdI GACNNNNNGTC 1 cut(s) 880
AjiI CACGTC 2 cut(s) 1501, 2703
AjnI CCWGG 8 cut(s) 186, 648, 1275, 1416, 1802, 2584, 3390, 3476
AjuI GAANNNNNNNTTGG 2 cut(s) 948, 980
AloI GAACNNNNNNTCC 4 cut(s) 1413, 1445, 1750, 1782
Alw21I GWGCWC 5 cut(s) 429, 1083, 1411, 2471, 2664
Alw26I GTCTC 5 cut(s) 888, 1449, 1745, 2021, 2528
Alw44I GTGCAC 1 cut(s) 1407
AlwI GGATC 9 cut(s) 332, 1253, 1266, 1815, 2562, 2747, 2901, 3313, 3326
Ama87I CYCGRG 3 cut(s) 494, 994, 2932
Aor13HI TCCGGA 3 cut(s) 2107, 2890, 2947
AoxI GGCC 5 cut(s) 571, 967, 2608, 3298, 3480
ApaLI GTGCAC 1 cut(s) 1407
ApeKI GCWGC 9 cut(s) 5, 20, 23, 1920, 2289, 2496, 2671, 2697, 3234
AseI ATTAAT 2 cut(s) 818, 1437
Asp700I GAANNNNTTC 3 cut(s) 2103, 2442, 2643
AspLEI GCGC 2 cut(s) 1008, 3047
AspS9I GGNCC 5 cut(s) 571, 895, 3298, 3406, 3480
AsuC2I CCSGG 5 cut(s) 1539, 1713, 2312, 2933, 2934
AsuHPI GGTGA 3 cut(s) 701, 1060, 3119
AvaI CYCGRG 3 cut(s) 494, 994, 2932
AvaII GGWCC 2 cut(s) 895, 3406
BaeGI GKGCMC 1 cut(s) 1411
BalI TGGCCA 1 cut(s) 969
BamHI GGATCC 2 cut(s) 1258, 3318
BanII GRGCYC 2 cut(s) 1083, 2664
BauI CACGAG 3 cut(s) 885, 899, 1518
BbsI GAAGAC 4 cut(s) 1549, 1769, 1960, 3438
Bbv12I GWGCWC 5 cut(s) 429, 1083, 1411, 2471, 2664
BbvCI CCTCAGC 1 cut(s) 1566
BbvI GCAGC 8 cut(s) 7, 10, 1932, 2276, 2483, 2658, 2684, 3246
BccI CCATC 9 cut(s) 349, 856, 1100, 1157, 1584, 1840, 1898, 2513, 3487
BcgI CGANNNNNNTGC 4 cut(s) 719, 753, 1897, 1931
BciT130I CCWGG 8 cut(s) 188, 650, 1277, 1418, 1804, 2586, 3392, 3478
BciVI GTATCC 2 cut(s) 1178, 1776
BclI TGATCA 2 cut(s) 1033, 3412
BcnI CCSGG 5 cut(s) 1539, 1713, 2312, 2933, 2934
BcoDI GTCTC 5 cut(s) 888, 1449, 1745, 2021, 2528
BfmI CTRYAG 3 cut(s) 852, 1876, 3165
BfoI RGCGCY 1 cut(s) 1009
BfuAI ACCTGC 1 cut(s) 3158
BfuI GTATCC 2 cut(s) 1178, 1776
BglII AGATCT 3 cut(s) 1936, 1972, 2176
BmcAI AGTACT 1 cut(s) 1597
Bme18I GGWCC 2 cut(s) 895, 3406
BmeRI GACNNNNNGTC 1 cut(s) 880
BmeT110I CYCGRG 3 cut(s) 494, 994, 2932
BmgBI CACGTC 2 cut(s) 1501, 2703
BmgT120I GGNCC 5 cut(s) 571, 895, 3298, 3406, 3480
BmiI GGNNCC 7 cut(s) 572, 1195, 1260, 1968, 3320, 3407, 3408
BpiI GAAGAC 4 cut(s) 1549, 1769, 1960, 3438
BpmI CTGGAG 4 cut(s) 1097, 1400, 1918, 2985
Bpu10I CCTNAGC 1 cut(s) 1566
BpuEI CTTGAG 3 cut(s) 24, 2013, 3235
BpuMI CCSGG 5 cut(s) 1539, 1713, 2312, 2933, 2934
BsaAI YACGTR 2 cut(s) 1850, 2067
BsaBI GATNNNNATC 1 cut(s) 1575
BsaHI GRCGYC 1 cut(s) 3197
BsaI GGTCTC 1 cut(s) 2528
BsaWI WCCGGW 3 cut(s) 2107, 2890, 2947
BsaXI ACNNNNNCTCC 2 cut(s) 2646, 2676
Bsc4I CCNNNNNNNGG 6 cut(s) 252, 580, 756, 854, 1418, 3307
Bse1I ACTGG 2 cut(s) 288, 1603
Bse3DI GCAATG 3 cut(s) 2332, 2540, 2705
Bse8I GATNNNNATC 1 cut(s) 1575
BseAI TCCGGA 3 cut(s) 2107, 2890, 2947
BseBI CCWGG 8 cut(s) 188, 650, 1277, 1418, 1804, 2586, 3392, 3478
BseGI GGATG 7 cut(s) 154, 1285, 1576, 2116, 2836, 2887, 3367
BseJI GATNNNNATC 1 cut(s) 1575
BseLI CCNNNNNNNGG 6 cut(s) 252, 580, 756, 854, 1418, 3307
BseMI GCAATG 3 cut(s) 2332, 2540, 2705
BseMII CTCAG 8 cut(s) 1557, 1646, 1761, 1971, 1997, 2032, 2273, 2469
BseNI ACTGG 2 cut(s) 288, 1603
BseRI GAGGAG 3 cut(s) 180, 776, 2984
BseSI GKGCMC 1 cut(s) 1411
BseXI GCAGC 8 cut(s) 7, 10, 1932, 2276, 2483, 2658, 2684, 3246
BseYI CCCAGC 1 cut(s) 3062
BsgI GTGCAG 1 cut(s) 2683
Bsh1285I CGRYCG 1 cut(s) 2218
BshFI GGCC 5 cut(s) 573, 969, 2610, 3300, 3482
BsiEI CGRYCG 1 cut(s) 2218
BsiHKAI GWGCWC 5 cut(s) 429, 1083, 1411, 2471, 2664
BsiHKCI CYCGRG 3 cut(s) 494, 994, 2932
BsiSI CCGG 7 cut(s) 1538, 1713, 2108, 2312, 2891, 2933, 2948
BsiWI CGTACG 1 cut(s) 1661
BslFI GGGAC 1 cut(s) 3419
BslI CCNNNNNNNGG 6 cut(s) 252, 580, 756, 854, 1418, 3307
BsmAI GTCTC 5 cut(s) 888, 1449, 1745, 2021, 2528
BsmFI GGGAC 1 cut(s) 3419
BsmI GAATGC 2 cut(s) 293, 2339
BsnI GGCC 5 cut(s) 573, 969, 2610, 3300, 3482
Bso31I GGTCTC 1 cut(s) 2528
BsoBI CYCGRG 3 cut(s) 494, 994, 2932
Bsp1286I GDGCHC 5 cut(s) 429, 1083, 1411, 2471, 2664
Bsp13I TCCGGA 3 cut(s) 2107, 2890, 2947
Bsp1407I TGTACA 1 cut(s) 2737
Bsp19I CCATGG 3 cut(s) 970, 3135, 3438
BspANI GGCC 5 cut(s) 573, 969, 2610, 3300, 3482
BspCNI CTCAG 8 cut(s) 1558, 1647, 1762, 1972, 1998, 2031, 2274, 2468
BspEI TCCGGA 3 cut(s) 2107, 2890, 2947
BspHI TCATGA 3 cut(s) 391, 2080, 3337
BspLI GGNNCC 7 cut(s) 572, 1195, 1260, 1968, 3320, 3407, 3408
BspMAI CTGCAG 1 cut(s) 3169
BspMI ACCTGC 1 cut(s) 3158
BspPI GGATC 9 cut(s) 332, 1253, 1266, 1815, 2562, 2747, 2901, 3313, 3326
BspTNI GGTCTC 1 cut(s) 2528
BsrBI CCGCTC 1 cut(s) 1414
BsrDI GCAATG 3 cut(s) 2332, 2540, 2705
BsrGI TGTACA 1 cut(s) 2737
BsrI ACTGG 2 cut(s) 288, 1603
BssNI GRCGYC 1 cut(s) 3197
BssSI CACGAG 3 cut(s) 885, 899, 1518
BssT1I CCWWGG 3 cut(s) 970, 3135, 3438
Bst2BI CACGAG 3 cut(s) 885, 899, 1518
Bst2UI CCWGG 8 cut(s) 188, 650, 1277, 1418, 1804, 2586, 3392, 3478
Bst4CI ACNGT 7 cut(s) 1429, 1612, 1692, 2426, 2549, 2737, 3350
Bst6I CTCTTC 2 cut(s) 253, 724
BstACI GRCGYC 1 cut(s) 3197
BstAUI TGTACA 1 cut(s) 2737
BstBAI YACGTR 2 cut(s) 1850, 2067
BstC8I GCNNGC 6 cut(s) 293, 501, 3143, 3165, 3309, 3333
BstDSI CCRYGG 3 cut(s) 970, 3135, 3438
BstENI CCTNNNNNAGG 1 cut(s) 250
BstF5I GGATG 7 cut(s) 154, 1285, 1576, 2116, 2836, 2887, 3367
BstH2I RGCGCY 1 cut(s) 1009
BstHHI GCGC 2 cut(s) 1008, 3047
BstMAI GTCTC 5 cut(s) 888, 1449, 1745, 2021, 2528
BstMCI CGRYCG 1 cut(s) 2218
BstMWI GCNNNNNNNGC 5 cut(s) 386, 1625, 2668, 3044, 3053
BstNI CCWGG 8 cut(s) 188, 650, 1277, 1418, 1804, 2586, 3392, 3478
BstNSI RCATGY 3 cut(s) 185, 350, 3145
BstSFI CTRYAG 3 cut(s) 852, 1876, 3165
BstSLI GKGCMC 1 cut(s) 1411
BstSNI TACGTA 1 cut(s) 2067
BstV1I GCAGC 8 cut(s) 7, 10, 1932, 2276, 2483, 2658, 2684, 3246
BstV2I GAAGAC 4 cut(s) 1549, 1769, 1960, 3438
BstX2I RGATCY 8 cut(s) 337, 1258, 1936, 1972, 2176, 2554, 2752, 3318
BstYI RGATCY 8 cut(s) 337, 1258, 1936, 1972, 2176, 2554, 2752, 3318
BsuI GTATCC 2 cut(s) 1178, 1776
BsuRI GGCC 5 cut(s) 573, 969, 2610, 3300, 3482
BtgI CCRYGG 3 cut(s) 970, 3135, 3438
BtgZI GCGATG 1 cut(s) 2129
BtrI CACGTC 2 cut(s) 1501, 2703
BtsCI GGATG 7 cut(s) 154, 1285, 1576, 2116, 2836, 2887, 3367
BtsI GCAGTG 1 cut(s) 1207
BtsIMutI CAGTG 3 cut(s) 1207, 2463, 3355
BveI ACCTGC 1 cut(s) 3158
Cac8I GCNNGC 6 cut(s) 293, 501, 3143, 3165, 3309, 3333
CciI TCATGA 3 cut(s) 391, 2080, 3337
CfoI GCGC 2 cut(s) 1008, 3047
Cfr13I GGNCC 5 cut(s) 571, 895, 3298, 3406, 3480
Cfr9I CCCGGG 1 cut(s) 2932
CseI GACGC 3 cut(s) 1554, 3186, 3255
Csp6I GTAC 7 cut(s) 350, 1596, 1662, 1709, 2422, 2430, 2738
CviQI GTAC 7 cut(s) 350, 1596, 1662, 1709, 2422, 2430, 2738
DraI TTTAAA 3 cut(s) 120, 1822, 2047
DriI GACNNNNNGTC 1 cut(s) 880
EaeI YGGCCR 1 cut(s) 967
Eam1104I CTCTTC 2 cut(s) 253, 724
Eam1105I GACNNNNNGTC 1 cut(s) 880
EarI CTCTTC 2 cut(s) 253, 724
EciI GGCGGA 1 cut(s) 635
Ecl136II GAGCTC 2 cut(s) 1081, 2662
Eco105I TACGTA 1 cut(s) 2067
Eco130I CCWWGG 3 cut(s) 970, 3135, 3438
Eco24I GRGCYC 2 cut(s) 1083, 2664
Eco31I GGTCTC 1 cut(s) 2528
Eco32I GATATC 3 cut(s) 529, 1339, 1796
Eco47I GGWCC 2 cut(s) 895, 3406
Eco53kI GAGCTC 2 cut(s) 1081, 2662
Eco57I CTGAAG 1 cut(s) 1803
Eco88I CYCGRG 3 cut(s) 494, 994, 2932
EcoICRI GAGCTC 2 cut(s) 1081, 2662
EcoNI CCTNNNNNAGG 1 cut(s) 250
EcoO109I RGGNCCY 3 cut(s) 571, 895, 3406
EcoRI GAATTC 2 cut(s) 641, 2132
EcoRII CCWGG 8 cut(s) 186, 648, 1275, 1416, 1802, 2584, 3390, 3476
EcoRV GATATC 3 cut(s) 529, 1339, 1796
EcoT14I CCWWGG 3 cut(s) 970, 3135, 3438
EcoT22I ATGCAT 4 cut(s) 382, 623, 1398, 1485
EcoT38I GRGCYC 2 cut(s) 1083, 2664
ErhI CCWWGG 3 cut(s) 970, 3135, 3438
FaqI GGGAC 1 cut(s) 3419
FauI CCCGC 1 cut(s) 2492
FauNDI CATATG 1 cut(s) 1869
FbaI TGATCA 2 cut(s) 1033, 3412
FblI GTMKAC 1 cut(s) 78
FokI GGATG 7 cut(s) 161, 1292, 1583, 2123, 2843, 2874, 3374
FriOI GRGCYC 2 cut(s) 1083, 2664
GlaI GCGC 2 cut(s) 1007, 3046
GsaI CCCAGC 1 cut(s) 3066
GsuI CTGGAG 4 cut(s) 1097, 1400, 1918, 2985
HaeII RGCGCY 1 cut(s) 1009
HaeIII GGCC 5 cut(s) 573, 969, 2610, 3300, 3482
HapII CCGG 7 cut(s) 1538, 1713, 2108, 2312, 2891, 2933, 2948
HgaI GACGC 3 cut(s) 1554, 3186, 3255
HhaI GCGC 2 cut(s) 1008, 3047
Hin1I GRCGYC 1 cut(s) 3197
Hin6I GCGC 2 cut(s) 1006, 3045
HinP1I GCGC 2 cut(s) 1006, 3045
HincII GTYRAC 1 cut(s) 450
HindII GTYRAC 1 cut(s) 450
HindIII AAGCTT 4 cut(s) 1095, 2060, 2264, 2642
HpaII CCGG 7 cut(s) 1538, 1713, 2108, 2312, 2891, 2933, 2948
HphI GGTGA 3 cut(s) 701, 1060, 3119
Hpy166II GTNNAC 6 cut(s) 79, 450, 1409, 1523, 2422, 2432
Hpy8I GTNNAC 6 cut(s) 79, 450, 1409, 1523, 2422, 2432
Hpy99I CGWCG 1 cut(s) 2869
HpyAV CCTTC 5 cut(s) 1778, 2046, 2250, 2461, 2621
HpyCH4III ACNGT 7 cut(s) 1429, 1612, 1692, 2426, 2549, 2737, 3350
HpyCH4IV ACGT 7 cut(s) 400, 753, 1500, 1849, 2066, 2702, 2773
HpyF10VI GCNNNNNNNGC 5 cut(s) 386, 1625, 2668, 3044, 3053
HpySE526I ACGT 7 cut(s) 400, 753, 1500, 1849, 2066, 2702, 2773
Hsp92I GRCGYC 1 cut(s) 3197
HspAI GCGC 2 cut(s) 1006, 3045
KflI GGGWCCC 1 cut(s) 3406
Kpn2I TCCGGA 3 cut(s) 2107, 2890, 2947
Ksp22I TGATCA 2 cut(s) 1033, 3412
LmnI GCTCC 5 cut(s) 1078, 1419, 1633, 2667, 2817
Lsp1109I GCAGC 8 cut(s) 7, 10, 1932, 2276, 2483, 2658, 2684, 3246
MaeII ACGT 7 cut(s) 400, 753, 1500, 1849, 2066, 2702, 2773
MaeIII GTNAC 6 cut(s) 794, 858, 1205, 1850, 2316, 3256
MbiI CCGCTC 1 cut(s) 1414
MfeI CAATTG 3 cut(s) 1512, 1989, 3302
MflI RGATCY 8 cut(s) 337, 1258, 1936, 1972, 2176, 2554, 2752, 3318
MhlI GDGCHC 5 cut(s) 429, 1083, 1411, 2471, 2664
MlsI TGGCCA 1 cut(s) 969
MluNI TGGCCA 1 cut(s) 969
MmeI TCCRAC 3 cut(s) 747, 774, 2198
Mox20I TGGCCA 1 cut(s) 969
Mph1103I ATGCAT 4 cut(s) 382, 623, 1398, 1485
MroI TCCGGA 3 cut(s) 2107, 2890, 2947
MroXI GAANNNNTTC 3 cut(s) 2103, 2442, 2643
MscI TGGCCA 1 cut(s) 969
MslI CAYNNNNRTG 7 cut(s) 1439, 1676, 2745, 3134, 3140, 3146, 3488
Msp20I TGGCCA 1 cut(s) 969
MspA1I CMGCKG 2 cut(s) 1654, 2671
MspI CCGG 7 cut(s) 1538, 1713, 2108, 2312, 2891, 2933, 2948
MunI CAATTG 3 cut(s) 1512, 1989, 3302
Mva1269I GAATGC 2 cut(s) 293, 2339
MvaI CCWGG 8 cut(s) 188, 650, 1277, 1418, 1804, 2586, 3392, 3478
MwoI GCNNNNNNNGC 5 cut(s) 386, 1625, 2668, 3044, 3053
NciI CCSGG 5 cut(s) 1539, 1713, 2312, 2933, 2934
NcoI CCATGG 3 cut(s) 970, 3135, 3438
NdeI CATATG 1 cut(s) 1869
NlaIV GGNNCC 7 cut(s) 572, 1195, 1260, 1968, 3320, 3407, 3408
NmeAIII GCCGAG 1 cut(s) 1896
NmuCI GTSAC 3 cut(s) 858, 1205, 3256
NsiI ATGCAT 4 cut(s) 382, 623, 1398, 1485
NspI RCATGY 3 cut(s) 185, 350, 3145
PaeI GCATGC 1 cut(s) 3145
PaeR7I CTCGAG 1 cut(s) 994
PagI TCATGA 3 cut(s) 391, 2080, 3337
PasI CCCWGGG 1 cut(s) 3391
PciI ACATGT 1 cut(s) 346
PctI GAATGC 2 cut(s) 293, 2339
PdmI GAANNNNTTC 3 cut(s) 2103, 2442, 2643
PfeI GAWTC 7 cut(s) 595, 1401, 1422, 1912, 2074, 2278, 2912
Pfl23II CGTACG 1 cut(s) 1661
PfoI TCCNGGA 1 cut(s) 2310
Ppu21I YACGTR 2 cut(s) 1850, 2067
PpuMI RGGWCCY 2 cut(s) 895, 3406
PscI ACATGT 1 cut(s) 346
PshBI ATTAAT 2 cut(s) 818, 1437
PsiI TTATAA 3 cut(s) 989, 1299, 3093
Psp124BI GAGCTC 2 cut(s) 1083, 2664
Psp1406I AACGTT 3 cut(s) 400, 753, 2773
Psp5II RGGWCCY 2 cut(s) 895, 3406
Psp6I CCWGG 8 cut(s) 186, 648, 1275, 1416, 1802, 2584, 3390, 3476
PspFI CCCAGC 1 cut(s) 3062
PspGI CCWGG 8 cut(s) 186, 648, 1275, 1416, 1802, 2584, 3390, 3476
PspLI CGTACG 1 cut(s) 1661
PspN4I GGNNCC 7 cut(s) 572, 1195, 1260, 1968, 3320, 3407, 3408
PspPI GGNCC 5 cut(s) 571, 895, 3298, 3406, 3480
PspPPI RGGWCCY 2 cut(s) 895, 3406
PstI CTGCAG 1 cut(s) 3169
PsuI RGATCY 8 cut(s) 337, 1258, 1936, 1972, 2176, 2554, 2752, 3318
RsaI GTAC 7 cut(s) 351, 1597, 1663, 1710, 2423, 2431, 2739
RsaNI GTAC 7 cut(s) 350, 1596, 1662, 1709, 2422, 2430, 2738
RseI CAYNNNNRTG 7 cut(s) 1439, 1676, 2745, 3134, 3140, 3146, 3488
SacI GAGCTC 2 cut(s) 1083, 2664
Sau96I GGNCC 5 cut(s) 571, 895, 3298, 3406, 3480
SbfI CCTGCAGG 1 cut(s) 3169
ScaI AGTACT 1 cut(s) 1597
SdaI CCTGCAGG 1 cut(s) 3169
SduI GDGCHC 5 cut(s) 429, 1083, 1411, 2471, 2664
SfcI CTRYAG 3 cut(s) 852, 1876, 3165
Sfr274I CTCGAG 1 cut(s) 994
SinI GGWCC 2 cut(s) 895, 3406
SlaI CTCGAG 1 cut(s) 994
SmaI CCCGGG 1 cut(s) 2934
SmiMI CAYNNNNRTG 7 cut(s) 1439, 1676, 2745, 3134, 3140, 3146, 3488
SmlI CTYRAG 4 cut(s) 39, 994, 2028, 3250
SmoI CTYRAG 4 cut(s) 39, 994, 2028, 3250
SnaBI TACGTA 1 cut(s) 2067
SphI GCATGC 1 cut(s) 3145
Sse8387I CCTGCAGG 1 cut(s) 3169
SspI AATATT 4 cut(s) 941, 1248, 1584, 2197
SstI GAGCTC 2 cut(s) 1083, 2664
StyI CCWWGG 3 cut(s) 970, 3135, 3438
TaaI ACNGT 7 cut(s) 1429, 1612, 1692, 2426, 2549, 2737, 3350
TaiI ACGT 7 cut(s) 403, 756, 1503, 1852, 2069, 2705, 2776
TaqI TCGA 5 cut(s) 522, 729, 995, 2055, 2867
TaqII GACCGA 1 cut(s) 2204
TatI WGTACW 3 cut(s) 1595, 2421, 2737
TauI GCSGC 1 cut(s) 458
TfiI GAWTC 7 cut(s) 595, 1401, 1422, 1912, 2074, 2278, 2912
TscAI CASTG 3 cut(s) 1214, 2463, 3355
TseFI GTSAC 3 cut(s) 858, 1205, 3256
TseI GCWGC 9 cut(s) 5, 20, 23, 1920, 2289, 2496, 2671, 2697, 3234
Tsp45I GTSAC 3 cut(s) 858, 1205, 3256
TspGWI ACGGA 3 cut(s) 322, 367, 2854
TspMI CCCGGG 1 cut(s) 2932
TspRI CASTG 3 cut(s) 1214, 2463, 3355
VneI GTGCAC 1 cut(s) 1407
VpaK11BI GGWCC 2 cut(s) 895, 3406
VspI ATTAAT 2 cut(s) 818, 1437
XagI CCTNNNNNAGG 1 cut(s) 250
XceI RCATGY 3 cut(s) 185, 350, 3145
XcmI CCANNNNNNNNNTGG 1 cut(s) 3490
XhoI CTCGAG 1 cut(s) 994
XmaI CCCGGG 1 cut(s) 2932
XmiI GTMKAC 1 cut(s) 78
XmnI GAANNNNTTC 3 cut(s) 2103, 2442, 2643
ZrmI AGTACT 1 cut(s) 1597
Zsp2I ATGCAT 4 cut(s) 382, 623, 1398, 1485
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.