FvH4_3g05740

RESISTANCE protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
3350996 .. 3356327
5332 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g05740.t3

Sequence Viewer

Length: 3576 bp
ATGGCTTCTTCTTCTGCTCATGCTTTTATATATGATGTCTTTCTTAGTTTCCGAGGCGAGGACACCCGCATCACTTTTACCAGTCATCTTTATAAGGCTCTAGTTGGGAAGAATATCAAAACCTACATAGATTATGAACTTGTGAGAGCAGAGGAAATTGCACCTGCCCTTATTGAAGCAATAGAGGAATCAAAGCTTGCGGTGGTCATTTTGTCACAAGACTACGCTTCTTCGACATGGTGCTTGGACGAACTTGTGCATATTTTGATATGCAAAGAAAGACATGGGCAAATTGTTGTACCCATTTTCTACAGATTAGACCCTTCAGATGTTCGCCACCAGAGGAAGAATTATGCAGTCGCATTTCTTAAACATGAAGAACGTTTCAAGAACATGACGGACAAGGTGCTAGAGTGGAGGGATGCTTTGACAAAAGCATCCAAACTAGCTGGGTTTGATTCAAGCAAATTTGGGCTTGAGTCTGAATTGGTTGAGGCAGTCGTCACAGATATTGTGATGAAGTTGAATCAAGAATGTTTAAGCGATTTGGACGGCCTGGTTGGAATTGAAAGTCGCATCCAGAAACTCGAGTCATTGTTATGCATTGTCCCACAAGATGTTGGTGTTCGCACAGTAGGTATTTGGGGCATGGGTGGTATAGGTAAGACCACCCTTGCTGATGCTGTATTCAACCGACTCTCATCTCAATTCGAAGCTTCATGTTTTCTTGCAAATGTTAGGGAAAAATCAGAAAACCATGGACTATATGATATGCGAAATGAACTTCTTCGCAACTTATTGAAGGATGAAAATGTAAGGATCAGCACTCCATCTATAGGATCGGCTTTAATCAAAAAGAGGCTCTCTCGTGCAAAAGTTCTTGTTGTGCTTGATGATGTGAATGATGTAAGTCAACTAGATTTTTTGGTTGGTAAACAAATTCAATTTGGATCAGGAAGTAGAATCATTATCACAACCAGAGATATGCATCAACTTAGAGAGATGCAACGACTGCAGAAAGGAGCAGACCATGATGTTATAATATACGAGGCAAAGGAGCTAAATCATCAGGAAGCACTCCAGCTCTTCGACTTGAATAATTCCAAGGAAATCAGGTACGGAGCAGAATATACCGAGTTGGTGAGAATGGTGGTGCACTATGCTGGGGGAGTTCCCTTGGCCCTTAAAATCTGGGGTTCCTTGTTTCGTCGATGCAAGAGTACACAAGAACGAGGAAGTTTCTTGAGAAAGTTGAAAAGGTTTCCTGAAAAGAAACTTCAAAATGTGTATAGGCTAAGCTATGATGCATTAGGAGAAAATGAGAGGAAGATATTTCTTTATATCGCATGTTTTCACAAAGGACATGAAATATGCAGTGCAATAGAACAATTAGATGCATGCGATTTATTTGCGGAGACTGGAATCAACATTCTCGTAGATATGTCCCTCATATCCATCAAAGACAAAGAGTGGACTGTCCTGGAAGAAAGAACTCGTTACCTGTGGATGCATGATGTGGTACAAGAAATGGGTTGGGAAATTGAGCGTGAACAATATCCTGCAAAGCCTGGAAAGCGCAGTAGGCTGTGTACTGTGGAGGACATATGTCATGTGTTGGAAAAGAACAAGGGGACCGAAAAGGTTCAGAGCATATCCCTGAACCTCTCTATGATTACAAAGCTAAAGTTGACTCCTCAAGCCTTCAAAAAGATGTGTAATCTAAAATTTCTAAAGTTATACGGTGAAGATCGCACGGGCCACTGCTATTACCCTTCGAAGGACTGCAATGTGCACTCTAATCTTCACGATCTTGAATATCTTCCTGATTCCCTTGTATATCTCAGCTGGCCTGAATATACTTTGAAATATTTGCCATCAACATTTTCTGCTGAAAATCTTACGGACCTTTCTATGCCTGGTAGCCAACTCCAGAGACTTTGGGGTGAAGGCCAGAAGCCTAGGAACTTAAAACGCATCGATCTCAGCCATTCTGAGCAGCTGGTTGAAGTTCCAGATCTCTCTATGAGTATAAACATTGAGAGGATAAACCTTGAAGGATGTAATGGGTTGGTTGAAGTTCCTTCCTATTTTGAAAATCTTCACAAGCTTACTTCGTTGAATGTGAGAAGTTGCACGAATCTTAGTGTCCTCTCAGATGTCCCATGCAATATGGTTACGTTGGAATTAGGTGGGACTGCAATAGAAGACTTGCCTTCCTCAATTTGGTCCCATGAAAAACTTGTTAGGTTGAATCTTGATGGGTGCGAGGGCATTAAGAATCTTCCAAACAGCATTTGGAAGATGTATTCCCTCACATCTCTTGTGTTGTGTGGGACAAGTATAGAAGCATTGCCCTCGTCAATCGAGTGTCTCTTGGGATTAAAAACTATTGACCTGCAAAGTTGCGAAAGGTTTGTCAGTCTCCCAACCAGCATTTGTAAATTGAAATCTCTTAAGATCCTTTATCTTATTGGATGCTCTAGCTTCGAAAACTTCCCTGGGATCTTGGAGCCTATGGAAATGCTGGAGAATCTTAGTTTAGGAGAAACCAAATTTAAAGACCTACCCTCTTTGATAGAAAACGTAGTTGGGCGGAATGAATTAGTGTTACCTGGGTGTAGAAGCTTTGAGTCTTTCCCAAACAGCACCTTGCCTCCCTCGTCGGTCATTTTATGGTCTTCGATGAGTGAACTAGACCTCAGTGACTGCACAATGTTAGAAGAAATCCCTGATTGCATTTTTAGCCTAAACATGTTATCTCGATTAGATGTGAGTGGCACCATGATTAAGAGCATACCTTCAACCATCAATCAAGCATCACATCTGAGGAGATTATATCTACAGGCATGCAAGCGCCTTGAATCTTTACCCAAGCTCCCATATCTTCTGGAATTTATAGATGCAAGTGGCTGCACGAGATTGAAAACAGTGTCTGGGTTGACAACTGCGCTCACAGAAGGTTCGGATAAAAGAGGTTCTTACCAGTTGCATATATTTTGTAACTGCGAAAGTTTGGATGAGAATGCGAGGAGGAACATAATGGATGAAGCACAACTTAGAAACAAGGCAACAGCTTATTATCCAAGATTTGAGTACGAGGTTAGATGTTCGGGAAATAAAATCCCAAACTGGGTGAGCTATCAAATGGAGGGATCTTCCATAGATATCACGCTTCCTCTACATTGGTCTGAAGATGCAAACCTTTTGGGTCTTGTTTTCTGTGTTGTTGTCGACTTCCGTAAAGCAATGGACGCGGAATGCGCGGGTGAATCTATTTTCAAAAGCGAAAATGGTGAAAGTCATACTTATGAGTTTAGCAATGAAAAGAGCTATTGGATCAATTGTGATGACGACAACTCAGATCATCTGGTAGTGGCGTGGTACGATTCCCTTCAGAAGGTGAGATGCACTCCTTATACCAATGCCACTGAAGCCTCTTTTCATTTCTATGTACGCGCAGACAGTAGACTCCAGGAAGAGGAGCTCAAGTATAGGGTGATGATGGTTTTTAGAAGTGGCTATGATACCACTCTTAGAAATTGTTATGTGCGGAAACTTTTAGTGGTGATGGGCTAG

Protein Analysis

1192

Amino Acids

135.57

Weight (kDa)

5.78

Isoelectric Point (pI)

47.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 11 - 189 1.1e-51 TIR domain
TIR_2 PF13676 13 - 119 6.2e-13 TIR domain
NB-ARC PF00931 206 - 338 6.1e-16 NB-ARC domain
WHD_ROQ1 PF23282 439 - 518 6.3e-13 Disease resistance protein Roq1-like, winged-helix domain
LRR_14 PF23598 788 - 888 3.9e-11 Leucine-rich repeat region
LRR_14 PF23598 941 - 1000 6.1e-06 Leucine-rich repeat region
C-JID PF20160 1074 - 1187 1.8e-10 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 93, 1040
AarI CACCTGC 1 cut(s) 172
Acc36I ACCTGC 2 cut(s) 172, 2403
AccB1I GGYRCC 1 cut(s) 2777
AccI GTMKAC 2 cut(s) 3231, 3466
AccII CGCG 3 cut(s) 3254, 3263, 3456
AciI CCGC 7 cut(s) 67, 200, 1412, 2593, 3254, 3263, 3550
AclI AACGTT 1 cut(s) 382
AclWI GGATC 7 cut(s) 827, 847, 958, 2452, 2510, 3160, 3344
AcsI RAATTY 5 cut(s) 467, 939, 1724, 2552, 2891
AcuI CTGAAG 4 cut(s) 309, 3210, 3377, 3450
AfaI GTAC 8 cut(s) 300, 1118, 1222, 1521, 1591, 3095, 3383, 3453
AfiI CCNNNNNNNGG 7 cut(s) 58, 836, 1777, 2223, 3130, 3397, 3478
AflII CTTAAG 1 cut(s) 2453
AflIII ACRYGT 1 cut(s) 2751
AjnI CCWGG 7 cut(s) 555, 1479, 1567, 1915, 2497, 2611, 3471
AjuI GAANNNNNNNTTGG 2 cut(s) 2571, 2603
Alw21I GWGCWC 3 cut(s) 1158, 1794, 3486
Alw26I GTCTC 4 cut(s) 1409, 1927, 2375, 2426
Alw44I GTGCAC 2 cut(s) 1154, 1790
AlwI GGATC 7 cut(s) 827, 847, 958, 2452, 2510, 3160, 3344
AlwNI CAGNNNCTG 2 cut(s) 2706, 2933
Ama87I CYCGRG 1 cut(s) 587
AoxI GGCC 5 cut(s) 553, 1179, 1756, 1847, 1948
ApaLI GTGCAC 2 cut(s) 1154, 1790
ApeKI GCWGC 2 cut(s) 1996, 2910
ApoI RAATTY 5 cut(s) 467, 939, 1724, 2552, 2891
ArsI GACNNNNNNTTYG 2 cut(s) 2400, 2432
Asp700I GAANNNNTTC 4 cut(s) 786, 1641, 1818, 2097
AspA2I CCTAGG 1 cut(s) 1958
AspLEI GCGC 5 cut(s) 1578, 2856, 2950, 3263, 3458
AspS9I GGNCC 5 cut(s) 1180, 1632, 1756, 1903, 2226
AsuHPI GGTGA 8 cut(s) 1153, 1754, 1955, 3145, 3278, 3305, 3412, 3508
AsuII TTCGAA 3 cut(s) 711, 1775, 2487
AvaI CYCGRG 1 cut(s) 587
AvaII GGWCC 3 cut(s) 1632, 1903, 2226
AvrII CCTAGG 1 cut(s) 1958
BaeGI GKGCMC 2 cut(s) 1158, 1794
BanI GGYRCC 1 cut(s) 2777
BanII GRGCYC 1 cut(s) 3486
BauI CACGAG 2 cut(s) 867, 2914
BbsI GAAGAC 2 cut(s) 2211, 2670
Bbv12I GWGCWC 3 cut(s) 1158, 1794, 3486
BbvI GCAGC 2 cut(s) 2008, 2897
BccI CCATC 7 cut(s) 838, 1463, 1882, 2252, 2813, 3496, 3562
BceAI ACGGC 1 cut(s) 568
BcgI CGANNNNNNTGC 4 cut(s) 1391, 1425, 2337, 2371
BciT130I CCWGG 7 cut(s) 557, 1481, 1569, 1917, 2499, 2613, 3473
BcoDI GTCTC 4 cut(s) 1409, 1927, 2375, 2426
BfaI CTAG 8 cut(s) 101, 410, 446, 917, 1959, 2481, 2693, 3574
BfmI CTRYAG 4 cut(s) 310, 834, 1013, 2840
BfoI RGCGCY 1 cut(s) 2857
BfrI CTTAAG 1 cut(s) 2453
BfuAI ACCTGC 2 cut(s) 172, 2403
BglII AGATCT 1 cut(s) 2014
BisI GCNGC 2 cut(s) 1997, 2911
BlnI CCTAGG 1 cut(s) 1958
BlpI GCTNAGC 1 cut(s) 1295
BlsI GCNGC 2 cut(s) 1998, 2912
Bme1390I CCNGG 7 cut(s) 557, 1481, 1569, 1917, 2499, 2613, 3473
Bme18I GGWCC 3 cut(s) 1632, 1903, 2226
BmeT110I CYCGRG 1 cut(s) 587
BmgT120I GGNCC 5 cut(s) 1180, 1632, 1756, 1903, 2226
BmiI GGNNCC 5 cut(s) 1198, 1633, 2228, 2511, 2779
BmrFI CCNGG 7 cut(s) 557, 1481, 1569, 1917, 2499, 2613, 3473
BmrI ACTGGG 1 cut(s) 3139
BmuI ACTGGG 1 cut(s) 3139
BoxI GACNNNNGTC 1 cut(s) 1605
BpiI GAAGAC 2 cut(s) 2211, 2670
BplI GAGNNNNNCTC 4 cut(s) 850, 882, 3394, 3426
BpmI CTGGAG 4 cut(s) 1064, 1913, 2546, 3455
Bpu1102I GCTNAGC 1 cut(s) 1295
Bpu14I TTCGAA 3 cut(s) 711, 1775, 2487
BpuEI CTTGAG 4 cut(s) 497, 1264, 1680, 3470
Bsa29I ATCGAT 1 cut(s) 1977
BsaBI GATNNNNATC 1 cut(s) 987
BsaJI CCNNGG 8 cut(s) 52, 757, 1104, 1176, 1958, 2497, 2498, 2612
BsaXI ACNNNNNCTCC 6 cut(s) 2638, 2668, 2859, 2889, 3473, 3503
Bsc4I CCNNNNNNNGG 7 cut(s) 58, 836, 1777, 2223, 3130, 3397, 3478
Bse1I ACTGG 4 cut(s) 81, 1423, 2983, 3134
Bse3DI GCAATG 4 cut(s) 1792, 2348, 3252, 3325
Bse8I GATNNNNATC 1 cut(s) 987
BseBI CCWGG 7 cut(s) 557, 1481, 1569, 1917, 2499, 2613, 3473
BseCI ATCGAT 1 cut(s) 1977
BseDI CCNNGG 8 cut(s) 52, 757, 1104, 1176, 1958, 2497, 2498, 2612
BseGI GGATG 9 cut(s) 427, 437, 576, 811, 1512, 2063, 2480, 3022, 3049
BseJI GATNNNNATC 1 cut(s) 987
BseLI CCNNNNNNNGG 7 cut(s) 58, 836, 1777, 2223, 3130, 3397, 3478
BseMI GCAATG 4 cut(s) 1792, 2348, 3252, 3325
BseMII CTCAG 7 cut(s) 1855, 1983, 1996, 2166, 2713, 2816, 3372
BseNI ACTGG 4 cut(s) 81, 1423, 2983, 3134
BseRI GAGGAG 4 cut(s) 1683, 2842, 3043, 3494
BseSI GKGCMC 2 cut(s) 1158, 1794
BseXI GCAGC 2 cut(s) 2008, 2897
BseYI CCCAGC 2 cut(s) 449, 1163
BsgI GTGCAG 2 cut(s) 2692, 2896
Bsh1236I CGCG 3 cut(s) 3254, 3263, 3456
BshFI GGCC 5 cut(s) 555, 1181, 1758, 1849, 1950
BshNI GGYRCC 1 cut(s) 2777
BshVI ATCGAT 1 cut(s) 1977
BsiHKAI GWGCWC 3 cut(s) 1158, 1794, 3486
BsiHKCI CYCGRG 1 cut(s) 587
BslFI GGGAC 7 cut(s) 593, 1429, 1645, 2144, 2206, 2212, 2347
BslI CCNNNNNNNGG 7 cut(s) 58, 836, 1777, 2223, 3130, 3397, 3478
BsmAI GTCTC 4 cut(s) 1409, 1927, 2375, 2426
BsmFI GGGAC 7 cut(s) 593, 1429, 1645, 2144, 2206, 2212, 2347
BsmI GAATGC 2 cut(s) 3028, 3263
BsnI GGCC 5 cut(s) 555, 1181, 1758, 1849, 1950
BsoBI CYCGRG 1 cut(s) 587
Bsp119I TTCGAA 3 cut(s) 711, 1775, 2487
Bsp1286I GDGCHC 3 cut(s) 1158, 1794, 3486
Bsp1720I GCTNAGC 1 cut(s) 1295
Bsp19I CCATGG 1 cut(s) 757
BspACI CCGC 7 cut(s) 67, 200, 1412, 2593, 3254, 3263, 3550
BspANI GGCC 5 cut(s) 555, 1181, 1758, 1849, 1950
BspCNI CTCAG 7 cut(s) 1854, 1984, 1995, 2165, 2712, 2817, 3371
BspDI ATCGAT 1 cut(s) 1977
BspFNI CGCG 3 cut(s) 3254, 3263, 3456
BspLI GGNNCC 5 cut(s) 1198, 1633, 2228, 2511, 2779
BspMAI CTGCAG 1 cut(s) 1017
BspMI ACCTGC 2 cut(s) 172, 2403
BspPI GGATC 7 cut(s) 827, 847, 958, 2452, 2510, 3160, 3344
BspQI GCTCTTC 1 cut(s) 1091
BspT104I TTCGAA 3 cut(s) 711, 1775, 2487
BspT107I GGYRCC 1 cut(s) 2777
BspTI CTTAAG 1 cut(s) 2453
BsrDI GCAATG 4 cut(s) 1792, 2348, 3252, 3325
BsrI ACTGG 4 cut(s) 81, 1423, 2983, 3134
BssECI CCNNGG 8 cut(s) 52, 757, 1104, 1176, 1958, 2497, 2498, 2612
BssSI CACGAG 2 cut(s) 867, 2914
BssT1I CCWWGG 4 cut(s) 757, 1104, 1176, 1958
Bst2BI CACGAG 2 cut(s) 867, 2914
Bst2UI CCWGG 7 cut(s) 557, 1481, 1569, 1917, 2499, 2613, 3473
Bst4CI ACNGT 6 cut(s) 634, 1477, 1594, 1742, 2929, 3464
Bst6I CTCTTC 2 cut(s) 1091, 3471
BstAFI CTTAAG 1 cut(s) 2453
BstAPI GCANNNNNTGC 1 cut(s) 1012
BstBI TTCGAA 3 cut(s) 711, 1775, 2487
BstC8I GCNNGC 5 cut(s) 198, 1399, 1847, 2848, 2852
BstDSI CCRYGG 1 cut(s) 757
BstENI CCTNNNNNAGG 1 cut(s) 3395
BstF5I GGATG 9 cut(s) 427, 437, 576, 811, 1512, 2063, 2480, 3022, 3049
BstFNI CGCG 3 cut(s) 3254, 3263, 3456
BstH2I RGCGCY 1 cut(s) 2857
BstHHI GCGC 5 cut(s) 1578, 2856, 2950, 3263, 3458
BstMAI GTCTC 4 cut(s) 1409, 1927, 2375, 2426
BstMWI GCNNNNNNNGC 7 cut(s) 1012, 1573, 1582, 2742, 3251, 3260, 3431
BstNI CCWGG 7 cut(s) 557, 1481, 1569, 1917, 2499, 2613, 3473
BstNSI RCATGY 4 cut(s) 1350, 1401, 2755, 2850
BstPAI GACNNNNGTC 1 cut(s) 1605
BstSCI CCNGG 7 cut(s) 555, 1479, 1567, 1915, 2497, 2611, 3471
BstSFI CTRYAG 4 cut(s) 310, 834, 1013, 2840
BstSLI GKGCMC 2 cut(s) 1158, 1794
BstUI CGCG 3 cut(s) 3254, 3263, 3456
BstV1I GCAGC 2 cut(s) 2008, 2897
BstV2I GAAGAC 2 cut(s) 2211, 2670
BstX2I RGATCY 4 cut(s) 2014, 2457, 2502, 3152
BstYI RGATCY 4 cut(s) 2014, 2457, 2502, 3152
Bsu15I ATCGAT 1 cut(s) 1977
BsuRI GGCC 5 cut(s) 555, 1181, 1758, 1849, 1950
BsuTUI ATCGAT 1 cut(s) 1977
BtgI CCRYGG 1 cut(s) 757
BtsCI GGATG 9 cut(s) 427, 437, 576, 811, 1512, 2063, 2480, 3022, 3049
BtsI GCAGTG 2 cut(s) 1381, 1759
BtsIMutI CAGTG 5 cut(s) 1381, 1759, 2707, 2934, 3426
BveI ACCTGC 2 cut(s) 172, 2403
Cac8I GCNNGC 5 cut(s) 198, 1399, 1847, 2848, 2852
CaiI CAGNNNCTG 2 cut(s) 2706, 2933
CfoI GCGC 5 cut(s) 1578, 2856, 2950, 3263, 3458
Cfr13I GGNCC 5 cut(s) 1180, 1632, 1756, 1903, 2226
ClaI ATCGAT 1 cut(s) 1977
CseI GACGC 1 cut(s) 3260
Csp6I GTAC 8 cut(s) 299, 1117, 1221, 1520, 1590, 3094, 3382, 3452
CviQI GTAC 8 cut(s) 299, 1117, 1221, 1520, 1590, 3094, 3382, 3452
DraI TTTAAA 1 cut(s) 2557
Eam1104I CTCTTC 2 cut(s) 1091, 3471
EarI CTCTTC 2 cut(s) 1091, 3471
EciI GGCGGA 1 cut(s) 2608
Ecl136II GAGCTC 1 cut(s) 3484
Eco130I CCWWGG 4 cut(s) 757, 1104, 1176, 1958
Eco24I GRGCYC 1 cut(s) 3486
Eco32I GATATC 1 cut(s) 3166
Eco47I GGWCC 3 cut(s) 1632, 1903, 2226
Eco53kI GAGCTC 1 cut(s) 3484
Eco57I CTGAAG 4 cut(s) 309, 3210, 3377, 3450
Eco88I CYCGRG 1 cut(s) 587
EcoICRI GAGCTC 1 cut(s) 3484
EcoNI CCTNNNNNAGG 1 cut(s) 3395
EcoRII CCWGG 7 cut(s) 555, 1479, 1567, 1915, 2497, 2611, 3471
EcoRV GATATC 1 cut(s) 3166
EcoT14I CCWWGG 4 cut(s) 757, 1104, 1176, 1958
EcoT22I ATGCAT 5 cut(s) 605, 990, 1309, 1399, 1512
EcoT38I GRGCYC 1 cut(s) 3486
ErhI CCWWGG 4 cut(s) 757, 1104, 1176, 1958
FalI AAGNNNNNCTT 6 cut(s) 2962, 2994, 3039, 3071, 3289, 3321
FaqI GGGAC 7 cut(s) 593, 1429, 1645, 2144, 2206, 2212, 2347
FauI CCCGC 2 cut(s) 74, 3256
FauNDI CATATG 1 cut(s) 1604
FblI GTMKAC 2 cut(s) 3231, 3466
Fnu4HI GCNGC 2 cut(s) 1997, 2911
FokI GGATG 9 cut(s) 424, 434, 563, 818, 1519, 2070, 2487, 3029, 3056
FriOI GRGCYC 1 cut(s) 3486
Fsp4HI GCNGC 2 cut(s) 1997, 2911
FspBI CTAG 8 cut(s) 101, 410, 446, 917, 1959, 2481, 2693, 3574
GlaI GCGC 5 cut(s) 1577, 2855, 2949, 3262, 3457
GluI GCNGC 2 cut(s) 1997, 2911
GsaI CCCAGC 2 cut(s) 453, 1167
GsuI CTGGAG 4 cut(s) 1064, 1913, 2546, 3455
HaeII RGCGCY 1 cut(s) 2857
HaeIII GGCC 5 cut(s) 555, 1181, 1758, 1849, 1950
HgaI GACGC 1 cut(s) 3260
HhaI GCGC 5 cut(s) 1578, 2856, 2950, 3263, 3458
Hin6I GCGC 5 cut(s) 1576, 2854, 2948, 3261, 3456
HinP1I GCGC 5 cut(s) 1576, 2854, 2948, 3261, 3456
HincII GTYRAC 4 cut(s) 914, 1689, 2940, 3232
HindII GTYRAC 4 cut(s) 914, 1689, 2940, 3232
HindIII AAGCTT 4 cut(s) 194, 714, 2105, 2623
HphI GGTGA 8 cut(s) 1153, 1754, 1955, 3145, 3278, 3305, 3412, 3508
Hpy99I CGWCG 2 cut(s) 1212, 2665
HpyCH4III ACNGT 6 cut(s) 634, 1477, 1594, 1742, 2929, 3464
HpyCH4IV ACGT 3 cut(s) 382, 2177, 2583
HpyF10VI GCNNNNNNNGC 7 cut(s) 1012, 1573, 1582, 2742, 3251, 3260, 3431
HpySE526I ACGT 3 cut(s) 382, 2177, 2583
HspAI GCGC 5 cut(s) 1576, 2854, 2948, 3261, 3456
LguI GCTCTTC 1 cut(s) 1091
LmnI GCTCC 6 cut(s) 1022, 1057, 1121, 2509, 2880, 3481
Lsp1109I GCAGC 2 cut(s) 2008, 2897
MaeI CTAG 8 cut(s) 101, 410, 446, 917, 1959, 2481, 2693, 3574
MaeII ACGT 3 cut(s) 382, 2177, 2583
MaeIII GTNAC 7 cut(s) 213, 502, 1496, 2173, 2607, 2702, 2999
MfeI CAATTG 1 cut(s) 3340
MflI RGATCY 4 cut(s) 2014, 2457, 2502, 3152
MhlI GDGCHC 3 cut(s) 1158, 1794, 3486
MlyI GAGTC 6 cut(s) 488, 599, 690, 1684, 2639, 3462
MmeI TCCRAC 3 cut(s) 541, 1596, 2160
Mph1103I ATGCAT 5 cut(s) 605, 990, 1309, 1399, 1512
MroXI GAANNNNTTC 4 cut(s) 786, 1641, 1818, 2097
MslI CAYNNNNRTG 3 cut(s) 598, 3306, 3447
MspA1I CMGCKG 2 cut(s) 1845, 1999
MspCI CTTAAG 1 cut(s) 2453
MspR9I CCNGG 7 cut(s) 557, 1481, 1569, 1917, 2499, 2613, 3473
MunI CAATTG 1 cut(s) 3340
Mva1269I GAATGC 2 cut(s) 3028, 3263
MvaI CCWGG 7 cut(s) 557, 1481, 1569, 1917, 2499, 2613, 3473
MvnI CGCG 3 cut(s) 3254, 3263, 3456
MwoI GCNNNNNNNGC 7 cut(s) 1012, 1573, 1582, 2742, 3251, 3260, 3431
NcoI CCATGG 1 cut(s) 757
NdeI CATATG 1 cut(s) 1604
NlaIV GGNNCC 5 cut(s) 1198, 1633, 2228, 2511, 2779
NmuCI GTSAC 3 cut(s) 213, 502, 2702
NsiI ATGCAT 5 cut(s) 605, 990, 1309, 1399, 1512
NspI RCATGY 4 cut(s) 1350, 1401, 2755, 2850
NspV TTCGAA 3 cut(s) 711, 1775, 2487
PaeI GCATGC 2 cut(s) 1401, 2850
PaeR7I CTCGAG 1 cut(s) 587
PaqCI CACCTGC 1 cut(s) 172
PasI CCCWGGG 1 cut(s) 2498
PciI ACATGT 1 cut(s) 2751
PciSI GCTCTTC 1 cut(s) 1091
PctI GAATGC 2 cut(s) 3028, 3263
PdmI GAANNNNTTC 4 cut(s) 786, 1641, 1818, 2097
PfoI TCCNGGA 2 cut(s) 1479, 3471
PkrI GCNGC 2 cut(s) 1998, 2912
PleI GAGTC 6 cut(s) 487, 598, 690, 1684, 2638, 3462
PpsI GAGTC 6 cut(s) 487, 598, 690, 1684, 2638, 3462
PscI ACATGT 1 cut(s) 2751
PshAI GACNNNNGTC 1 cut(s) 1605
PsiI TTATAA 2 cut(s) 93, 1040
Psp124BI GAGCTC 1 cut(s) 3486
Psp1406I AACGTT 1 cut(s) 382
Psp6I CCWGG 7 cut(s) 555, 1479, 1567, 1915, 2497, 2611, 3471
PspFI CCCAGC 2 cut(s) 449, 1163
PspGI CCWGG 7 cut(s) 555, 1479, 1567, 1915, 2497, 2611, 3471
PspN4I GGNNCC 5 cut(s) 1198, 1633, 2228, 2511, 2779
PspPI GGNCC 5 cut(s) 1180, 1632, 1756, 1903, 2226
PspXI VCTCGAGB 1 cut(s) 587
PstI CTGCAG 1 cut(s) 1017
PstNI CAGNNNCTG 2 cut(s) 2706, 2933
PsuI RGATCY 4 cut(s) 2014, 2457, 2502, 3152
PvuII CAGCTG 2 cut(s) 1845, 1999
RsaI GTAC 8 cut(s) 300, 1118, 1222, 1521, 1591, 3095, 3383, 3453
RsaNI GTAC 8 cut(s) 299, 1117, 1221, 1520, 1590, 3094, 3382, 3452
RseI CAYNNNNRTG 3 cut(s) 598, 3306, 3447
SacI GAGCTC 1 cut(s) 3486
SalI GTCGAC 1 cut(s) 3230
SapI GCTCTTC 1 cut(s) 1091
SatI GCNGC 2 cut(s) 1997, 2911
Sau96I GGNCC 5 cut(s) 1180, 1632, 1756, 1903, 2226
SchI GAGTC 6 cut(s) 488, 599, 690, 1684, 2639, 3462
ScrFI CCNGG 7 cut(s) 557, 1481, 1569, 1917, 2499, 2613, 3473
SduI GDGCHC 3 cut(s) 1158, 1794, 3486
SfcI CTRYAG 4 cut(s) 310, 834, 1013, 2840
Sfr274I CTCGAG 1 cut(s) 587
SfuI TTCGAA 3 cut(s) 711, 1775, 2487
SinI GGWCC 3 cut(s) 1632, 1903, 2226
SlaI CTCGAG 1 cut(s) 587
SmiMI CAYNNNNRTG 3 cut(s) 598, 3306, 3447
SmlI CTYRAG 6 cut(s) 476, 587, 1243, 1695, 2453, 3485
SmoI CTYRAG 6 cut(s) 476, 587, 1243, 1695, 2453, 3485
SphI GCATGC 2 cut(s) 1401, 2850
SsiI CCGC 7 cut(s) 67, 200, 1412, 2593, 3254, 3263, 3550
SspI AATATT 1 cut(s) 1868
SspMI CTAG 8 cut(s) 101, 410, 446, 917, 1959, 2481, 2693, 3574
SstI GAGCTC 1 cut(s) 3486
StyD4I CCNGG 7 cut(s) 555, 1479, 1567, 1915, 2497, 2611, 3471
StyI CCWWGG 4 cut(s) 757, 1104, 1176, 1958
TaaI ACNGT 6 cut(s) 634, 1477, 1594, 1742, 2929, 3464
TaiI ACGT 3 cut(s) 385, 2180, 2586
TaqII GACCGA 2 cut(s) 1649, 2653
TatI WGTACW 2 cut(s) 1220, 1589
TscAI CASTG 5 cut(s) 1381, 1766, 2707, 2934, 3433
TseFI GTSAC 3 cut(s) 213, 502, 2702
TseI GCWGC 2 cut(s) 1996, 2910
Tsp45I GTSAC 3 cut(s) 213, 502, 2702
TspGWI ACGGA 4 cut(s) 413, 1134, 1916, 3227
TspRI CASTG 5 cut(s) 1381, 1766, 2707, 2934, 3433
Vha464I CTTAAG 1 cut(s) 2453
VneI GTGCAC 2 cut(s) 1154, 1790
VpaK11BI GGWCC 3 cut(s) 1632, 1903, 2226
XagI CCTNNNNNAGG 1 cut(s) 3395
XapI RAATTY 5 cut(s) 467, 939, 1724, 2552, 2891
XceI RCATGY 4 cut(s) 1350, 1401, 2755, 2850
XcmI CCANNNNNNNNNTGG 1 cut(s) 2292
XhoI CTCGAG 1 cut(s) 587
XmaJI CCTAGG 1 cut(s) 1958
XmiI GTMKAC 2 cut(s) 3231, 3466
XmnI GAANNNNTTC 4 cut(s) 786, 1641, 1818, 2097
XspI CTAG 8 cut(s) 101, 410, 446, 917, 1959, 2481, 2693, 3574
Zsp2I ATGCAT 5 cut(s) 605, 990, 1309, 1399, 1512
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.