RESISTANCE protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 13 - 189 | 7e-56 | TIR domain |
| TIR_2 | PF13676 | 16 - 125 | 2.5e-15 | TIR domain |
| NB-ARC | PF00931 | 208 - 346 | 2.2e-13 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 439 - 515 | 6.8e-17 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 745 - 840 | 7.4e-12 | Leucine-rich repeat region |
| C-JID | PF20160 | 1046 - 1186 | 7e-14 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 971, 2424 |
| Acc16I | TGCGCA | 2 cut(s) | 27, 267 |
| AccBSI | CCGCTC | 1 cut(s) | 1231 |
| AccII | CGCG | 2 cut(s) | 3507, 3509 |
| AciI | CCGC | 9 cut(s) | 76, 105, 1119, 1166, 1231, 1412, 1471, 2578, 3509 |
| AclI | AACGTT | 2 cut(s) | 391, 1428 |
| AclWI | GGATC | 5 cut(s) | 323, 827, 847, 2958, 3361 |
| AcsI | RAATTY | 6 cut(s) | 1170, 1709, 2061, 2370, 2537, 3150 |
| AcuI | CTGAAG | 2 cut(s) | 1064, 3240 |
| AdeI | CACNNNGTG | 1 cut(s) | 3400 |
| AfaI | GTAC | 5 cut(s) | 342, 871, 3113, 3125, 3410 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 67, 352, 836, 858, 874, 2737, 2772, 2811, 3424 |
| AflIII | ACRYGT | 2 cut(s) | 337, 3290 |
| AjnI | CCWGG | 3 cut(s) | 1552, 2596, 3396 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 912, 944, 2556, 2588 |
| AleI | CACNNNNGTG | 2 cut(s) | 1095, 2685 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1413, 1445 |
| Alw21I | GWGCWC | 3 cut(s) | 411, 1223, 1779 |
| Alw26I | GTCTC | 5 cut(s) | 1449, 2360, 2411, 3281, 3557 |
| Alw44I | GTGCAC | 1 cut(s) | 1775 |
| AlwI | GGATC | 5 cut(s) | 323, 827, 847, 2958, 3361 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2691, 2918 |
| Ama87I | CYCGRG | 2 cut(s) | 587, 1738 |
| AoxI | GGCC | 6 cut(s) | 174, 472, 1741, 1832, 1933, 3558 |
| ApaLI | GTGCAC | 1 cut(s) | 1775 |
| ApeKI | GCWGC | 6 cut(s) | 365, 368, 1012, 1163, 1981, 2895 |
| ApoI | RAATTY | 6 cut(s) | 1170, 1709, 2061, 2370, 2537, 3150 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 2385, 2417, 2929, 2961 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 618, 786, 1077, 1803, 2082 |
| AspA2I | CCTAGG | 1 cut(s) | 1943 |
| AspLEI | GCGC | 6 cut(s) | 28, 268, 1563, 2841, 3507, 3509 |
| AspS9I | GGNCC | 8 cut(s) | 175, 877, 950, 1575, 1741, 2211, 3018, 3432 |
| AsuC2I | CCSGG | 3 cut(s) | 954, 1580, 2806 |
| AsuHPI | GGTGA | 6 cut(s) | 944, 3175, 3311, 3338, 3386, 3439 |
| AsuII | TTCGAA | 1 cut(s) | 711 |
| AvaI | CYCGRG | 2 cut(s) | 587, 1738 |
| AvaII | GGWCC | 6 cut(s) | 877, 950, 1575, 2211, 3018, 3432 |
| AvrII | CCTAGG | 1 cut(s) | 1943 |
| BaeGI | GKGCMC | 1 cut(s) | 1779 |
| BauI | CACGAG | 1 cut(s) | 2968 |
| BbsI | GAAGAC | 2 cut(s) | 2915, 3177 |
| Bbv12I | GWGCWC | 3 cut(s) | 411, 1223, 1779 |
| BbvCI | CCTCAGC | 1 cut(s) | 2810 |
| BbvI | GCAGC | 6 cut(s) | 355, 377, 999, 1150, 1993, 2882 |
| BccI | CCATC | 6 cut(s) | 340, 752, 838, 1867, 2729, 2798 |
| BceAI | ACGGC | 1 cut(s) | 2448 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3120, 3154 |
| BciT130I | CCWGG | 3 cut(s) | 1554, 2598, 3398 |
| BclI | TGATCA | 2 cut(s) | 934, 2109 |
| BcnI | CCSGG | 3 cut(s) | 954, 1580, 2806 |
| BcoDI | GTCTC | 5 cut(s) | 1449, 2360, 2411, 3281, 3557 |
| BfaI | CTAG | 6 cut(s) | 446, 917, 978, 1061, 1944, 2873 |
| BfmI | CTRYAG | 2 cut(s) | 834, 2825 |
| BfoI | RGCGCY | 1 cut(s) | 2842 |
| BglII | AGATCT | 3 cut(s) | 1999, 2487, 2821 |
| BisI | GCNGC | 7 cut(s) | 105, 366, 369, 1013, 1164, 1982, 2896 |
| BlnI | CCTAGG | 1 cut(s) | 1943 |
| BlsI | GCNGC | 7 cut(s) | 106, 367, 370, 1014, 1165, 1983, 2897 |
| Bme1390I | CCNGG | 6 cut(s) | 954, 1554, 1580, 2598, 2806, 3398 |
| Bme18I | GGWCC | 6 cut(s) | 877, 950, 1575, 2211, 3018, 3432 |
| BmeT110I | CYCGRG | 2 cut(s) | 587, 1738 |
| BmgT120I | GGNCC | 8 cut(s) | 175, 877, 950, 1575, 1741, 2211, 3018, 3432 |
| BmiI | GGNNCC | 7 cut(s) | 1198, 1577, 2213, 2496, 2533, 2764, 3108 |
| BmrFI | CCNGG | 6 cut(s) | 954, 1554, 1580, 2598, 2806, 3398 |
| BpiI | GAAGAC | 2 cut(s) | 2915, 3177 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 2342, 2374, 3421, 3453 |
| BpmI | CTGGAG | 1 cut(s) | 2186 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1177, 2810, 3555 |
| Bpu14I | TTCGAA | 1 cut(s) | 711 |
| BpuEI | CTTGAG | 5 cut(s) | 395, 523, 1114, 1665, 3440 |
| BpuMI | CCSGG | 3 cut(s) | 954, 1580, 2806 |
| Bsa29I | ATCGAT | 1 cut(s) | 1962 |
| BsaBI | GATNNNNATC | 3 cut(s) | 987, 1454, 3194 |
| BsaI | GGTCTC | 1 cut(s) | 3557 |
| BsaJI | CCNNGG | 5 cut(s) | 61, 1578, 1757, 1943, 2597 |
| BsaWI | WCCGGW | 2 cut(s) | 3103, 3520 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1353, 1383, 2844, 2874 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 67, 352, 836, 858, 874, 2737, 2772, 2811, 3424 |
| Bse118I | RCCGGY | 2 cut(s) | 172, 677 |
| Bse1I | ACTGG | 2 cut(s) | 90, 1489 |
| Bse3DI | GCAATG | 1 cut(s) | 1777 |
| Bse8I | GATNNNNATC | 3 cut(s) | 987, 1454, 3194 |
| BseBI | CCWGG | 3 cut(s) | 1554, 2598, 3398 |
| BseCI | ATCGAT | 1 cut(s) | 1962 |
| BseDI | CCNNGG | 5 cut(s) | 61, 1578, 1757, 1943, 2597 |
| BseJI | GATNNNNATC | 3 cut(s) | 987, 1454, 3194 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 67, 352, 836, 858, 874, 2737, 2772, 2811, 3424 |
| BseMI | GCAATG | 1 cut(s) | 1777 |
| BseNI | ACTGG | 2 cut(s) | 90, 1489 |
| BsePI | GCGCGC | 1 cut(s) | 3505 |
| BseRI | GAGGAG | 4 cut(s) | 9, 171, 1668, 2827 |
| BseSI | GKGCMC | 1 cut(s) | 1779 |
| BseXI | GCAGC | 6 cut(s) | 355, 377, 999, 1150, 1993, 2882 |
| BseYI | CCCAGC | 1 cut(s) | 449 |
| BsgI | GTGCAG | 3 cut(s) | 134, 2677, 2916 |
| Bsh1236I | CGCG | 2 cut(s) | 3507, 3509 |
| BshFI | GGCC | 6 cut(s) | 176, 474, 1743, 1834, 1935, 3560 |
| BshVI | ATCGAT | 1 cut(s) | 1962 |
| BsiHKAI | GWGCWC | 3 cut(s) | 411, 1223, 1779 |
| BsiHKCI | CYCGRG | 2 cut(s) | 587, 1738 |
| BsiSI | CCGG | 7 cut(s) | 173, 678, 953, 1580, 2806, 3104, 3521 |
| BslFI | GGGAC | 3 cut(s) | 2197, 2332, 2606 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 67, 352, 836, 858, 874, 2737, 2772, 2811, 3424 |
| BsmAI | GTCTC | 5 cut(s) | 1449, 2360, 2411, 3281, 3557 |
| BsmFI | GGGAC | 3 cut(s) | 2197, 2332, 2606 |
| BsmI | GAATGC | 3 cut(s) | 284, 539, 3013 |
| BsnI | GGCC | 6 cut(s) | 176, 474, 1743, 1834, 1935, 3560 |
| Bso31I | GGTCTC | 1 cut(s) | 3557 |
| BsoBI | CYCGRG | 2 cut(s) | 587, 1738 |
| Bsp119I | TTCGAA | 1 cut(s) | 711 |
| Bsp1286I | GDGCHC | 3 cut(s) | 411, 1223, 1779 |
| BspACI | CCGC | 9 cut(s) | 76, 105, 1119, 1166, 1231, 1412, 1471, 2578, 3509 |
| BspANI | GGCC | 6 cut(s) | 176, 474, 1743, 1834, 1935, 3560 |
| BspDI | ATCGAT | 1 cut(s) | 1962 |
| BspFNI | CGCG | 2 cut(s) | 3507, 3509 |
| BspLI | GGNNCC | 7 cut(s) | 1198, 1577, 2213, 2496, 2533, 2764, 3108 |
| BspPI | GGATC | 5 cut(s) | 323, 827, 847, 2958, 3361 |
| BspQI | GCTCTTC | 1 cut(s) | 1091 |
| BspT104I | TTCGAA | 1 cut(s) | 711 |
| BspTNI | GGTCTC | 1 cut(s) | 3557 |
| BsrBI | CCGCTC | 1 cut(s) | 1231 |
| BsrDI | GCAATG | 1 cut(s) | 1777 |
| BsrFI | RCCGGY | 2 cut(s) | 172, 677 |
| BsrI | ACTGG | 2 cut(s) | 90, 1489 |
| BssAI | RCCGGY | 2 cut(s) | 172, 677 |
| BssECI | CCNNGG | 5 cut(s) | 61, 1578, 1757, 1943, 2597 |
| BssHII | GCGCGC | 1 cut(s) | 3505 |
| BssSI | CACGAG | 1 cut(s) | 2968 |
| BssT1I | CCWWGG | 2 cut(s) | 1757, 1943 |
| Bst2BI | CACGAG | 1 cut(s) | 2968 |
| Bst2UI | CCWGG | 3 cut(s) | 1554, 2598, 3398 |
| Bst4CI | ACNGT | 5 cut(s) | 634, 770, 1150, 2914, 3058 |
| Bst6I | CTCTTC | 1 cut(s) | 1091 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1012 |
| BstBI | TTCGAA | 1 cut(s) | 711 |
| BstC8I | GCNNGC | 5 cut(s) | 30, 1832, 1836, 2837, 3507 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3422 |
| BstFNI | CGCG | 2 cut(s) | 3507, 3509 |
| BstH2I | RGCGCY | 1 cut(s) | 2842 |
| BstHHI | GCGC | 6 cut(s) | 28, 268, 1563, 2841, 3507, 3509 |
| BstMAI | GTCTC | 5 cut(s) | 1449, 2360, 2411, 3281, 3557 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 471, 1012, 1558, 1567, 1897, 3458 |
| BstNI | CCWGG | 3 cut(s) | 1554, 2598, 3398 |
| BstNSI | RCATGY | 5 cut(s) | 32, 341, 1350, 1401, 3294 |
| BstSCI | CCNGG | 6 cut(s) | 952, 1552, 1578, 2596, 2804, 3396 |
| BstSFI | CTRYAG | 2 cut(s) | 834, 2825 |
| BstSLI | GKGCMC | 1 cut(s) | 1779 |
| BstUI | CGCG | 2 cut(s) | 3507, 3509 |
| BstV1I | GCAGC | 6 cut(s) | 355, 377, 999, 1150, 1993, 2882 |
| BstV2I | GAAGAC | 2 cut(s) | 2915, 3177 |
| BstX2I | RGATCY | 4 cut(s) | 328, 1999, 2487, 2821 |
| BstYI | RGATCY | 4 cut(s) | 328, 1999, 2487, 2821 |
| Bsu15I | ATCGAT | 1 cut(s) | 1962 |
| BsuRI | GGCC | 6 cut(s) | 176, 474, 1743, 1834, 1935, 3560 |
| BsuTUI | ATCGAT | 1 cut(s) | 1962 |
| BtsIMutI | CAGTG | 4 cut(s) | 630, 2692, 2919, 2933 |
| Cac8I | GCNNGC | 5 cut(s) | 30, 1832, 1836, 2837, 3507 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2691, 2918 |
| CfoI | GCGC | 6 cut(s) | 28, 268, 1563, 2841, 3507, 3509 |
| Cfr10I | RCCGGY | 2 cut(s) | 172, 677 |
| Cfr13I | GGNCC | 8 cut(s) | 175, 877, 950, 1575, 1741, 2211, 3018, 3432 |
| ClaI | ATCGAT | 1 cut(s) | 1962 |
| CsiI | ACCWGGT | 1 cut(s) | 3396 |
| Csp6I | GTAC | 5 cut(s) | 341, 870, 3112, 3124, 3409 |
| CviQI | GTAC | 5 cut(s) | 341, 870, 3112, 3124, 3409 |
| DraI | TTTAAA | 1 cut(s) | 2542 |
| DraIII | CACNNNGTG | 1 cut(s) | 3400 |
| Eam1104I | CTCTTC | 1 cut(s) | 1091 |
| EarI | CTCTTC | 1 cut(s) | 1091 |
| EciI | GGCGGA | 2 cut(s) | 1486, 2593 |
| Eco130I | CCWWGG | 2 cut(s) | 1757, 1943 |
| Eco31I | GGTCTC | 1 cut(s) | 3557 |
| Eco32I | GATATC | 2 cut(s) | 1452, 3196 |
| Eco47I | GGWCC | 6 cut(s) | 877, 950, 1575, 2211, 3018, 3432 |
| Eco57I | CTGAAG | 2 cut(s) | 1064, 3240 |
| Eco88I | CYCGRG | 2 cut(s) | 587, 1738 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3422 |
| EcoO109I | RGGNCCY | 1 cut(s) | 877 |
| EcoRI | GAATTC | 1 cut(s) | 1170 |
| EcoRII | CCWGG | 3 cut(s) | 1552, 2596, 3396 |
| EcoRV | GATATC | 2 cut(s) | 1452, 3196 |
| EcoT14I | CCWWGG | 2 cut(s) | 1757, 1943 |
| EcoT22I | ATGCAT | 5 cut(s) | 605, 990, 1309, 1399, 1503 |
| ErhI | CCWWGG | 2 cut(s) | 1757, 1943 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1655, 1687 |
| FaqI | GGGAC | 3 cut(s) | 2197, 2332, 2606 |
| FauI | CCCGC | 3 cut(s) | 83, 1159, 1224 |
| FbaI | TGATCA | 2 cut(s) | 934, 2109 |
| Fnu4HI | GCNGC | 7 cut(s) | 105, 366, 369, 1013, 1164, 1982, 2896 |
| Fsp4HI | GCNGC | 7 cut(s) | 105, 366, 369, 1013, 1164, 1982, 2896 |
| FspBI | CTAG | 6 cut(s) | 446, 917, 978, 1061, 1944, 2873 |
| FspI | TGCGCA | 2 cut(s) | 27, 267 |
| GlaI | GCGC | 6 cut(s) | 27, 267, 1562, 2840, 3506, 3508 |
| GluI | GCNGC | 7 cut(s) | 105, 366, 369, 1013, 1164, 1982, 2896 |
| GsaI | CCCAGC | 1 cut(s) | 453 |
| GsuI | CTGGAG | 1 cut(s) | 2186 |
| HaeII | RGCGCY | 1 cut(s) | 2842 |
| HaeIII | GGCC | 6 cut(s) | 176, 474, 1743, 1834, 1935, 3560 |
| HapII | CCGG | 7 cut(s) | 173, 678, 953, 1580, 2806, 3104, 3521 |
| HhaI | GCGC | 6 cut(s) | 28, 268, 1563, 2841, 3507, 3509 |
| Hin6I | GCGC | 6 cut(s) | 26, 266, 1561, 2839, 3505, 3507 |
| HinP1I | GCGC | 6 cut(s) | 26, 266, 1561, 2839, 3505, 3507 |
| HindIII | AAGCTT | 5 cut(s) | 203, 714, 2090, 2608, 3200 |
| HpaII | CCGG | 7 cut(s) | 173, 678, 953, 1580, 2806, 3104, 3521 |
| HphI | GGTGA | 6 cut(s) | 944, 3175, 3311, 3338, 3386, 3439 |
| Hpy166II | GTNNAC | 7 cut(s) | 1541, 1575, 1777, 2017, 2925, 3435, 3479 |
| Hpy8I | GTNNAC | 7 cut(s) | 1541, 1575, 1777, 2017, 2925, 3435, 3479 |
| Hpy99I | CGWCG | 3 cut(s) | 1212, 2647, 2650 |
| HpyCH4III | ACNGT | 5 cut(s) | 634, 770, 1150, 2914, 3058 |
| HpyCH4IV | ACGT | 3 cut(s) | 391, 1428, 2568 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 471, 1012, 1558, 1567, 1897, 3458 |
| HpySE526I | ACGT | 3 cut(s) | 391, 1428, 2568 |
| HspAI | GCGC | 6 cut(s) | 26, 266, 1561, 2839, 3505, 3507 |
| Ksp22I | TGATCA | 2 cut(s) | 934, 2109 |
| LguI | GCTCTTC | 1 cut(s) | 1091 |
| LmnI | GCTCC | 6 cut(s) | 1022, 1121, 2494, 2775, 2865, 3345 |
| Lsp1109I | GCAGC | 6 cut(s) | 355, 377, 999, 1150, 1993, 2882 |
| MabI | ACCWGGT | 1 cut(s) | 3396 |
| MaeI | CTAG | 6 cut(s) | 446, 917, 978, 1061, 1944, 2873 |
| MaeII | ACGT | 3 cut(s) | 391, 1428, 2568 |
| MaeIII | GTNAC | 4 cut(s) | 222, 2592, 2672, 2687 |
| MbiI | CCGCTC | 1 cut(s) | 1231 |
| MfeI | CAATTG | 3 cut(s) | 1388, 1530, 2113 |
| MflI | RGATCY | 4 cut(s) | 328, 1999, 2487, 2821 |
| MhlI | GDGCHC | 3 cut(s) | 411, 1223, 1779 |
| MlyI | GAGTC | 6 cut(s) | 535, 599, 690, 1669, 2624, 3474 |
| MmeI | TCCRAC | 2 cut(s) | 541, 1581 |
| Mph1103I | ATGCAT | 5 cut(s) | 605, 990, 1309, 1399, 1503 |
| MroXI | GAANNNNTTC | 5 cut(s) | 618, 786, 1077, 1803, 2082 |
| MslI | CAYNNNNRTG | 6 cut(s) | 99, 598, 1095, 1439, 2685, 3474 |
| MspA1I | CMGCKG | 4 cut(s) | 368, 1012, 1830, 1984 |
| MspI | CCGG | 7 cut(s) | 173, 678, 953, 1580, 2806, 3104, 3521 |
| MspR9I | CCNGG | 6 cut(s) | 954, 1554, 1580, 2598, 2806, 3398 |
| MunI | CAATTG | 3 cut(s) | 1388, 1530, 2113 |
| Mva1269I | GAATGC | 3 cut(s) | 284, 539, 3013 |
| MvaI | CCWGG | 3 cut(s) | 1554, 2598, 3398 |
| MvnI | CGCG | 2 cut(s) | 3507, 3509 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 471, 1012, 1558, 1567, 1897, 3458 |
| NciI | CCSGG | 3 cut(s) | 954, 1580, 2806 |
| NlaIV | GGNNCC | 7 cut(s) | 1198, 1577, 2213, 2496, 2533, 2764, 3108 |
| NmeAIII | GCCGAG | 1 cut(s) | 3586 |
| NmuCI | GTSAC | 2 cut(s) | 222, 2687 |
| NsbI | TGCGCA | 2 cut(s) | 27, 267 |
| NsiI | ATGCAT | 5 cut(s) | 605, 990, 1309, 1399, 1503 |
| NspI | RCATGY | 5 cut(s) | 32, 341, 1350, 1401, 3294 |
| NspV | TTCGAA | 1 cut(s) | 711 |
| OliI | CACNNNNGTG | 2 cut(s) | 1095, 2685 |
| PaeI | GCATGC | 1 cut(s) | 32 |
| PaeR7I | CTCGAG | 1 cut(s) | 587 |
| PauI | GCGCGC | 1 cut(s) | 3505 |
| PciI | ACATGT | 2 cut(s) | 337, 3290 |
| PciSI | GCTCTTC | 1 cut(s) | 1091 |
| PctI | GAATGC | 3 cut(s) | 284, 539, 3013 |
| PdmI | GAANNNNTTC | 5 cut(s) | 618, 786, 1077, 1803, 2082 |
| PflFI | GACNNNGTC | 1 cut(s) | 2914 |
| PkrI | GCNGC | 7 cut(s) | 106, 367, 370, 1014, 1165, 1983, 2897 |
| PleI | GAGTC | 6 cut(s) | 534, 598, 690, 1669, 2623, 3474 |
| PpsI | GAGTC | 6 cut(s) | 534, 598, 690, 1669, 2623, 3474 |
| PpuMI | RGGWCCY | 1 cut(s) | 877 |
| PscI | ACATGT | 2 cut(s) | 337, 3290 |
| PsiI | TTATAA | 2 cut(s) | 971, 2424 |
| Psp1406I | AACGTT | 2 cut(s) | 391, 1428 |
| Psp5II | RGGWCCY | 1 cut(s) | 877 |
| Psp6I | CCWGG | 3 cut(s) | 1552, 2596, 3396 |
| PspFI | CCCAGC | 1 cut(s) | 449 |
| PspGI | CCWGG | 3 cut(s) | 1552, 2596, 3396 |
| PspN4I | GGNNCC | 7 cut(s) | 1198, 1577, 2213, 2496, 2533, 2764, 3108 |
| PspPI | GGNCC | 8 cut(s) | 175, 877, 950, 1575, 1741, 2211, 3018, 3432 |
| PspPPI | RGGWCCY | 1 cut(s) | 877 |
| PspXI | VCTCGAGB | 1 cut(s) | 587 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 603, 635 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2691, 2918 |
| PsuI | RGATCY | 4 cut(s) | 328, 1999, 2487, 2821 |
| PsyI | GACNNNGTC | 1 cut(s) | 2914 |
| PteI | GCGCGC | 1 cut(s) | 3505 |
| PvuII | CAGCTG | 4 cut(s) | 368, 1012, 1830, 1984 |
| RsaI | GTAC | 5 cut(s) | 342, 871, 3113, 3125, 3410 |
| RsaNI | GTAC | 5 cut(s) | 341, 870, 3112, 3124, 3409 |
| RseI | CAYNNNNRTG | 6 cut(s) | 99, 598, 1095, 1439, 2685, 3474 |
| SapI | GCTCTTC | 1 cut(s) | 1091 |
| SatI | GCNGC | 7 cut(s) | 105, 366, 369, 1013, 1164, 1982, 2896 |
| Sau96I | GGNCC | 8 cut(s) | 175, 877, 950, 1575, 1741, 2211, 3018, 3432 |
| SchI | GAGTC | 6 cut(s) | 535, 599, 690, 1669, 2624, 3474 |
| ScrFI | CCNGG | 6 cut(s) | 954, 1554, 1580, 2598, 2806, 3398 |
| SduI | GDGCHC | 3 cut(s) | 411, 1223, 1779 |
| SexAI | ACCWGGT | 1 cut(s) | 3396 |
| SfcI | CTRYAG | 2 cut(s) | 834, 2825 |
| Sfr274I | CTCGAG | 1 cut(s) | 587 |
| SfuI | TTCGAA | 1 cut(s) | 711 |
| SinI | GGWCC | 6 cut(s) | 877, 950, 1575, 2211, 3018, 3432 |
| SlaI | CTCGAG | 1 cut(s) | 587 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 99, 598, 1095, 1439, 2685, 3474 |
| SmlI | CTYRAG | 6 cut(s) | 410, 538, 587, 1093, 1680, 3419 |
| SmoI | CTYRAG | 6 cut(s) | 410, 538, 587, 1093, 1680, 3419 |
| SphI | GCATGC | 1 cut(s) | 32 |
| SsiI | CCGC | 9 cut(s) | 76, 105, 1119, 1166, 1231, 1412, 1471, 2578, 3509 |
| SspI | AATATT | 1 cut(s) | 1853 |
| SspMI | CTAG | 6 cut(s) | 446, 917, 978, 1061, 1944, 2873 |
| StyD4I | CCNGG | 6 cut(s) | 952, 1552, 1578, 2596, 2804, 3396 |
| StyI | CCWWGG | 2 cut(s) | 1757, 1943 |
| TaaI | ACNGT | 5 cut(s) | 634, 770, 1150, 2914, 3058 |
| TaiI | ACGT | 3 cut(s) | 394, 1431, 2571 |
| TaqII | GACCGA | 2 cut(s) | 2638, 3581 |
| TauI | GCSGC | 1 cut(s) | 107 |
| TscAI | CASTG | 4 cut(s) | 637, 2692, 2919, 2940 |
| TseFI | GTSAC | 2 cut(s) | 222, 2687 |
| TseI | GCWGC | 6 cut(s) | 365, 368, 1012, 1163, 1981, 2895 |
| Tsp45I | GTSAC | 2 cut(s) | 222, 2687 |
| TspGWI | ACGGA | 4 cut(s) | 309, 2631, 3099, 3359 |
| TspRI | CASTG | 4 cut(s) | 637, 2692, 2919, 2940 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2914 |
| VneI | GTGCAC | 1 cut(s) | 1775 |
| VpaK11BI | GGWCC | 6 cut(s) | 877, 950, 1575, 2211, 3018, 3432 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3422 |
| XapI | RAATTY | 6 cut(s) | 1170, 1709, 2061, 2370, 2537, 3150 |
| XbaI | TCTAGA | 1 cut(s) | 2872 |
| XceI | RCATGY | 5 cut(s) | 32, 341, 1350, 1401, 3294 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2277 |
| XhoI | CTCGAG | 1 cut(s) | 587 |
| XmaJI | CCTAGG | 1 cut(s) | 1943 |
| XmnI | GAANNNNTTC | 5 cut(s) | 618, 786, 1077, 1803, 2082 |
| XspI | CTAG | 6 cut(s) | 446, 917, 978, 1061, 1944, 2873 |
| Zsp2I | ATGCAT | 5 cut(s) | 605, 990, 1309, 1399, 1503 |