TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 217 - 374 | 3.1e-19 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 539, 641 |
| AccII | CGCG | 1 cut(s) | 966 |
| AciI | CCGC | 1 cut(s) | 928 |
| AclWI | GGATC | 3 cut(s) | 234, 486, 564 |
| AcoI | YGGCCR | 1 cut(s) | 863 |
| AcsI | RAATTY | 3 cut(s) | 148, 503, 663 |
| AcuI | CTGAAG | 1 cut(s) | 308 |
| AfaI | GTAC | 3 cut(s) | 37, 468, 1013 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 470, 553, 800, 801, 1077 |
| AflII | CTTAAG | 1 cut(s) | 116 |
| AgsI | TTSAA | 3 cut(s) | 702, 778, 1181 |
| AjnI | CCWGG | 3 cut(s) | 4, 628, 865 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1116, 1148 |
| AluBI | AGCT | 7 cut(s) | 115, 208, 274, 340, 403, 595, 715 |
| AluI | AGCT | 7 cut(s) | 115, 208, 274, 340, 403, 595, 715 |
| Alw21I | GWGCWC | 1 cut(s) | 342 |
| Alw26I | GTCTC | 3 cut(s) | 77, 1102, 1205 |
| AlwI | GGATC | 3 cut(s) | 234, 486, 564 |
| Ama87I | CYCGRG | 1 cut(s) | 74 |
| AoxI | GGCC | 2 cut(s) | 863, 990 |
| ApeKI | GCWGC | 3 cut(s) | 403, 438, 526 |
| ApoI | RAATTY | 3 cut(s) | 148, 503, 663 |
| AsuC2I | CCSGG | 2 cut(s) | 464, 654 |
| AsuHPI | GGTGA | 1 cut(s) | 1093 |
| AvaI | CYCGRG | 1 cut(s) | 74 |
| BanII | GRGCYC | 1 cut(s) | 342 |
| Bbv12I | GWGCWC | 1 cut(s) | 342 |
| BbvI | GCAGC | 3 cut(s) | 390, 425, 538 |
| BccI | CCATC | 2 cut(s) | 428, 837 |
| BciT130I | CCWGG | 3 cut(s) | 6, 630, 867 |
| BcnI | CCSGG | 2 cut(s) | 464, 654 |
| BcoDI | GTCTC | 3 cut(s) | 77, 1102, 1205 |
| BfaI | CTAG | 2 cut(s) | 170, 449 |
| BfrI | CTTAAG | 1 cut(s) | 116 |
| BisI | GCNGC | 3 cut(s) | 404, 439, 527 |
| BlsI | GCNGC | 3 cut(s) | 405, 440, 528 |
| BmcAI | AGTACT | 1 cut(s) | 37 |
| Bme1390I | CCNGG | 5 cut(s) | 6, 464, 630, 654, 867 |
| BmeT110I | CYCGRG | 1 cut(s) | 74 |
| BmiI | GGNNCC | 1 cut(s) | 1164 |
| BmrFI | CCNGG | 5 cut(s) | 6, 464, 630, 654, 867 |
| BmsI | GCATC | 4 cut(s) | 167, 577, 739, 992 |
| BpmI | CTGGAG | 1 cut(s) | 374 |
| BpuEI | CTTGAG | 4 cut(s) | 209, 256, 322, 1098 |
| BpuMI | CCSGG | 2 cut(s) | 464, 654 |
| BsaJI | CCNNGG | 3 cut(s) | 407, 462, 628 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 347, 377 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 470, 553, 800, 801, 1077 |
| BseBI | CCWGG | 3 cut(s) | 6, 630, 867 |
| BseDI | CCNNGG | 3 cut(s) | 407, 462, 628 |
| BseGI | GGATG | 1 cut(s) | 182 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 470, 553, 800, 801, 1077 |
| BseMII | CTCAG | 1 cut(s) | 978 |
| BseRI | GAGGAG | 1 cut(s) | 711 |
| BseXI | GCAGC | 3 cut(s) | 390, 425, 538 |
| Bsh1236I | CGCG | 1 cut(s) | 966 |
| BshFI | GGCC | 2 cut(s) | 865, 992 |
| BsiHKAI | GWGCWC | 1 cut(s) | 342 |
| BsiHKCI | CYCGRG | 1 cut(s) | 74 |
| BsiSI | CCGG | 2 cut(s) | 464, 653 |
| BslFI | GGGAC | 1 cut(s) | 611 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 470, 553, 800, 801, 1077 |
| BsmAI | GTCTC | 3 cut(s) | 77, 1102, 1205 |
| BsmBI | CGTCTC | 1 cut(s) | 1205 |
| BsmFI | GGGAC | 1 cut(s) | 611 |
| BsmI | GAATGC | 1 cut(s) | 773 |
| BsnI | GGCC | 2 cut(s) | 865, 992 |
| BsoBI | CYCGRG | 1 cut(s) | 74 |
| Bsp1286I | GDGCHC | 1 cut(s) | 342 |
| Bsp143I | GATC | 5 cut(s) | 226, 478, 556, 904, 1117 |
| Bsp19I | CCATGG | 1 cut(s) | 407 |
| Bsp68I | TCGCGA | 1 cut(s) | 966 |
| BspACI | CCGC | 1 cut(s) | 928 |
| BspANI | GGCC | 2 cut(s) | 865, 992 |
| BspCNI | CTCAG | 1 cut(s) | 979 |
| BspFNI | CGCG | 1 cut(s) | 966 |
| BspHI | TCATGA | 2 cut(s) | 733, 1120 |
| BspLI | GGNNCC | 1 cut(s) | 1164 |
| BspPI | GGATC | 3 cut(s) | 234, 486, 564 |
| BspQI | GCTCTTC | 1 cut(s) | 105 |
| BspTI | CTTAAG | 1 cut(s) | 116 |
| BssECI | CCNNGG | 3 cut(s) | 407, 462, 628 |
| BssMI | GATC | 5 cut(s) | 226, 478, 556, 904, 1117 |
| BssT1I | CCWWGG | 1 cut(s) | 407 |
| Bst2UI | CCWGG | 3 cut(s) | 6, 630, 867 |
| Bst4CI | ACNGT | 4 cut(s) | 363, 494, 518, 1075 |
| Bst6I | CTCTTC | 1 cut(s) | 105 |
| BstAFI | CTTAAG | 1 cut(s) | 116 |
| BstDEI | CTNAG | 1 cut(s) | 987 |
| BstDSI | CCRYGG | 1 cut(s) | 407 |
| BstF5I | GGATG | 1 cut(s) | 182 |
| BstFNI | CGCG | 1 cut(s) | 966 |
| BstKTI | GATC | 5 cut(s) | 229, 481, 559, 907, 1120 |
| BstMAI | GTCTC | 3 cut(s) | 77, 1102, 1205 |
| BstMBI | GATC | 5 cut(s) | 226, 478, 556, 904, 1117 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 151, 205, 271, 337, 409, 989 |
| BstNI | CCWGG | 3 cut(s) | 6, 630, 867 |
| BstNSI | RCATGY | 1 cut(s) | 445 |
| BstSCI | CCNGG | 5 cut(s) | 4, 462, 628, 652, 865 |
| BstUI | CGCG | 1 cut(s) | 966 |
| BstV1I | GCAGC | 3 cut(s) | 390, 425, 538 |
| BstX2I | RGATCY | 1 cut(s) | 226 |
| BstYI | RGATCY | 1 cut(s) | 226 |
| BsuRI | GGCC | 2 cut(s) | 865, 992 |
| BtgI | CCRYGG | 1 cut(s) | 407 |
| BtsCI | GGATG | 1 cut(s) | 182 |
| BtsIMutI | CAGTG | 1 cut(s) | 1071 |
| BtuMI | TCGCGA | 1 cut(s) | 966 |
| CciI | TCATGA | 2 cut(s) | 733, 1120 |
| Csp6I | GTAC | 3 cut(s) | 36, 467, 1012 |
| CviAII | CATG | 8 cut(s) | 408, 442, 604, 734, 745, 908, 1006, 1121 |
| CviQI | GTAC | 3 cut(s) | 36, 467, 1012 |
| DdeI | CTNAG | 1 cut(s) | 987 |
| DpnI | GATC | 5 cut(s) | 228, 480, 558, 906, 1119 |
| DpnII | GATC | 5 cut(s) | 226, 478, 556, 904, 1117 |
| DraI | TTTAAA | 1 cut(s) | 499 |
| EaeI | YGGCCR | 1 cut(s) | 863 |
| Eam1104I | CTCTTC | 1 cut(s) | 105 |
| EarI | CTCTTC | 1 cut(s) | 105 |
| EciI | GGCGGA | 1 cut(s) | 917 |
| Ecl136II | GAGCTC | 1 cut(s) | 340 |
| Eco130I | CCWWGG | 1 cut(s) | 407 |
| Eco147I | AGGCCT | 1 cut(s) | 992 |
| Eco24I | GRGCYC | 1 cut(s) | 342 |
| Eco32I | GATATC | 1 cut(s) | 1192 |
| Eco53kI | GAGCTC | 1 cut(s) | 340 |
| Eco57I | CTGAAG | 1 cut(s) | 308 |
| Eco88I | CYCGRG | 1 cut(s) | 74 |
| EcoICRI | GAGCTC | 1 cut(s) | 340 |
| EcoRI | GAATTC | 2 cut(s) | 148, 503 |
| EcoRII | CCWGG | 3 cut(s) | 4, 628, 865 |
| EcoRV | GATATC | 1 cut(s) | 1192 |
| EcoT14I | CCWWGG | 1 cut(s) | 407 |
| EcoT38I | GRGCYC | 1 cut(s) | 342 |
| ErhI | CCWWGG | 1 cut(s) | 407 |
| Esp3I | CGTCTC | 1 cut(s) | 1205 |
| FaeI | CATG | 8 cut(s) | 411, 445, 607, 737, 748, 911, 1009, 1124 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 121, 153 |
| FaqI | GGGAC | 1 cut(s) | 611 |
| FatI | CATG | 8 cut(s) | 407, 441, 603, 733, 744, 907, 1005, 1120 |
| Fnu4HI | GCNGC | 3 cut(s) | 404, 439, 527 |
| FokI | GGATG | 1 cut(s) | 189 |
| FriOI | GRGCYC | 1 cut(s) | 342 |
| Fsp4HI | GCNGC | 3 cut(s) | 404, 439, 527 |
| FspBI | CTAG | 2 cut(s) | 170, 449 |
| GluI | GCNGC | 3 cut(s) | 404, 439, 527 |
| GsuI | CTGGAG | 1 cut(s) | 374 |
| HaeIII | GGCC | 2 cut(s) | 865, 992 |
| HapII | CCGG | 2 cut(s) | 464, 653 |
| Hin1II | CATG | 8 cut(s) | 411, 445, 607, 737, 748, 911, 1009, 1124 |
| HincII | GTYRAC | 1 cut(s) | 490 |
| HindII | GTYRAC | 1 cut(s) | 490 |
| HindIII | AAGCTT | 1 cut(s) | 713 |
| HinfI | GANTC | 6 cut(s) | 121, 250, 316, 382, 600, 1095 |
| HpaII | CCGG | 2 cut(s) | 464, 653 |
| HphI | GGTGA | 1 cut(s) | 1093 |
| Hpy166II | GTNNAC | 2 cut(s) | 490, 1071 |
| Hpy188I | TCNGA | 4 cut(s) | 158, 561, 904, 988 |
| Hpy8I | GTNNAC | 2 cut(s) | 490, 1071 |
| Hpy99I | CGWCG | 1 cut(s) | 338 |
| HpyAV | CCTTC | 8 cut(s) | 66, 222, 283, 288, 354, 731, 820, 1142 |
| HpyCH4III | ACNGT | 4 cut(s) | 363, 494, 518, 1075 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 151, 205, 271, 337, 409, 989 |
| HpyF3I | CTNAG | 1 cut(s) | 987 |
| Hsp92II | CATG | 8 cut(s) | 411, 445, 607, 737, 748, 911, 1009, 1124 |
| Kzo9I | GATC | 5 cut(s) | 226, 478, 556, 904, 1117 |
| LguI | GCTCTTC | 1 cut(s) | 105 |
| LmnI | GCTCC | 3 cut(s) | 159, 345, 570 |
| Lsp1109I | GCAGC | 3 cut(s) | 390, 425, 538 |
| LweI | GCATC | 4 cut(s) | 167, 577, 739, 992 |
| MaeI | CTAG | 2 cut(s) | 170, 449 |
| MaeIII | GTNAC | 2 cut(s) | 444, 749 |
| MalI | GATC | 5 cut(s) | 228, 480, 558, 906, 1119 |
| MboI | GATC | 5 cut(s) | 226, 478, 556, 904, 1117 |
| MboII | GAAGA | 4 cut(s) | 59, 116, 122, 1199 |
| MfeI | CAATTG | 2 cut(s) | 241, 373 |
| MflI | RGATCY | 1 cut(s) | 226 |
| MhlI | GDGCHC | 1 cut(s) | 342 |
| MlyI | GAGTC | 5 cut(s) | 259, 325, 391, 609, 1104 |
| MmeI | TCCRAC | 1 cut(s) | 181 |
| MseI | TTAA | 4 cut(s) | 117, 165, 425, 498 |
| MspCI | CTTAAG | 1 cut(s) | 116 |
| MspI | CCGG | 2 cut(s) | 464, 653 |
| MspR9I | CCNGG | 5 cut(s) | 6, 464, 630, 654, 867 |
| MunI | CAATTG | 2 cut(s) | 241, 373 |
| Mva1269I | GAATGC | 1 cut(s) | 773 |
| MvaI | CCWGG | 3 cut(s) | 6, 630, 867 |
| MvnI | CGCG | 1 cut(s) | 966 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 151, 205, 271, 337, 409, 989 |
| NciI | CCSGG | 2 cut(s) | 464, 654 |
| NcoI | CCATGG | 1 cut(s) | 407 |
| NdeII | GATC | 5 cut(s) | 226, 478, 556, 904, 1117 |
| NlaIII | CATG | 8 cut(s) | 411, 445, 607, 737, 748, 911, 1009, 1124 |
| NlaIV | GGNNCC | 1 cut(s) | 1164 |
| NmuCI | GTSAC | 1 cut(s) | 444 |
| NruI | TCGCGA | 1 cut(s) | 966 |
| NspI | RCATGY | 1 cut(s) | 445 |
| PaeR7I | CTCGAG | 1 cut(s) | 74 |
| PagI | TCATGA | 2 cut(s) | 733, 1120 |
| PceI | AGGCCT | 1 cut(s) | 992 |
| PciSI | GCTCTTC | 1 cut(s) | 105 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 604 |
| PctI | GAATGC | 1 cut(s) | 773 |
| PfeI | GAWTC | 1 cut(s) | 121 |
| PflFI | GACNNNGTC | 1 cut(s) | 518 |
| PfoI | TCCNGGA | 1 cut(s) | 652 |
| PkrI | GCNGC | 3 cut(s) | 405, 440, 528 |
| PleI | GAGTC | 5 cut(s) | 258, 324, 390, 608, 1103 |
| PpsI | GAGTC | 5 cut(s) | 258, 324, 390, 608, 1103 |
| PsiI | TTATAA | 2 cut(s) | 539, 641 |
| Psp124BI | GAGCTC | 1 cut(s) | 342 |
| Psp6I | CCWGG | 3 cut(s) | 4, 628, 865 |
| PspGI | CCWGG | 3 cut(s) | 4, 628, 865 |
| PspN4I | GGNNCC | 1 cut(s) | 1164 |
| PsuI | RGATCY | 1 cut(s) | 226 |
| PsyI | GACNNNGTC | 1 cut(s) | 518 |
| RruI | TCGCGA | 1 cut(s) | 966 |
| RsaI | GTAC | 3 cut(s) | 37, 468, 1013 |
| RsaNI | GTAC | 3 cut(s) | 36, 467, 1012 |
| SacI | GAGCTC | 1 cut(s) | 342 |
| SapI | GCTCTTC | 1 cut(s) | 105 |
| SaqAI | TTAA | 4 cut(s) | 117, 165, 425, 498 |
| SatI | GCNGC | 3 cut(s) | 404, 439, 527 |
| Sau3AI | GATC | 5 cut(s) | 226, 478, 556, 904, 1117 |
| ScaI | AGTACT | 1 cut(s) | 37 |
| SchI | GAGTC | 5 cut(s) | 259, 325, 391, 609, 1104 |
| ScrFI | CCNGG | 5 cut(s) | 6, 464, 630, 654, 867 |
| SduI | GDGCHC | 1 cut(s) | 342 |
| SfaNI | GCATC | 4 cut(s) | 167, 577, 739, 992 |
| Sfr274I | CTCGAG | 1 cut(s) | 74 |
| SlaI | CTCGAG | 1 cut(s) | 74 |
| SmlI | CTYRAG | 6 cut(s) | 74, 116, 188, 235, 301, 1113 |
| SmoI | CTYRAG | 6 cut(s) | 74, 116, 188, 235, 301, 1113 |
| SseBI | AGGCCT | 1 cut(s) | 992 |
| SsiI | CCGC | 1 cut(s) | 928 |
| SspMI | CTAG | 2 cut(s) | 170, 449 |
| SstI | GAGCTC | 1 cut(s) | 342 |
| StuI | AGGCCT | 1 cut(s) | 992 |
| StyD4I | CCNGG | 5 cut(s) | 4, 462, 628, 652, 865 |
| StyI | CCWWGG | 1 cut(s) | 407 |
| TaaI | ACNGT | 4 cut(s) | 363, 494, 518, 1075 |
| TaqI | TCGA | 5 cut(s) | 75, 204, 336, 522, 598 |
| TatI | WGTACW | 1 cut(s) | 35 |
| TfiI | GAWTC | 1 cut(s) | 121 |
| Tru1I | TTAA | 4 cut(s) | 117, 165, 425, 498 |
| Tru9I | TTAA | 4 cut(s) | 117, 165, 425, 498 |
| TscAI | CASTG | 1 cut(s) | 1078 |
| TseFI | GTSAC | 1 cut(s) | 444 |
| TseI | GCWGC | 3 cut(s) | 403, 438, 526 |
| Tsp45I | GTSAC | 1 cut(s) | 444 |
| TspDTI | ATGAA | 7 cut(s) | 48, 102, 733, 750, 994, 1137, 1161 |
| TspGWI | ACGGA | 1 cut(s) | 239 |
| TspRI | CASTG | 1 cut(s) | 1078 |
| Tth111I | GACNNNGTC | 1 cut(s) | 518 |
| Vha464I | CTTAAG | 1 cut(s) | 116 |
| XapI | RAATTY | 3 cut(s) | 148, 503, 663 |
| XbaI | TCTAGA | 1 cut(s) | 169 |
| XceI | RCATGY | 1 cut(s) | 445 |
| XhoI | CTCGAG | 1 cut(s) | 74 |
| XspI | CTAG | 2 cut(s) | 170, 449 |
| ZrmI | AGTACT | 1 cut(s) | 37 |