RESISTANCE protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 3 cut(s) | 170, 553, 2782 |
| Acc65I | GGTACC | 1 cut(s) | 233 |
| AccB1I | GGYRCC | 2 cut(s) | 203, 233 |
| AccI | GTMKAC | 1 cut(s) | 3533 |
| AccII | CGCG | 3 cut(s) | 105, 448, 2805 |
| AccIII | TCCGGA | 1 cut(s) | 3142 |
| AclI | AACGTT | 1 cut(s) | 690 |
| AclWI | GGATC | 5 cut(s) | 236, 710, 2955, 2969, 2982 |
| AcoI | YGGCCR | 2 cut(s) | 184, 2122 |
| AcsI | RAATTY | 7 cut(s) | 1305, 1580, 1941, 2054, 2351, 2868, 3138 |
| AcuI | CTGAAG | 5 cut(s) | 1409, 1998, 2199, 2819, 3190 |
| AcyI | GRCGYC | 2 cut(s) | 204, 3467 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 49, 143, 182, 257, 1202, 1763 |
| AflII | CTTAAG | 2 cut(s) | 1946, 2815 |
| AflIII | ACRYGT | 4 cut(s) | 724, 2484, 3278, 3408 |
| AgeI | ACCGGT | 3 cut(s) | 222, 236, 697 |
| AjiI | CACGTC | 2 cut(s) | 938, 2892 |
| AjnI | CCWGG | 4 cut(s) | 792, 1885, 2295, 3127 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 909, 941, 1956, 1988 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1758, 1790 |
| Alw21I | GWGCWC | 1 cut(s) | 2657 |
| Alw26I | GTCTC | 6 cut(s) | 1794, 1995, 2207, 2294, 2409, 2717 |
| AlwI | GGATC | 5 cut(s) | 236, 710, 2955, 2969, 2982 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2610, 2682 |
| Ama87I | CYCGRG | 2 cut(s) | 139, 269 |
| Aor13HI | TCCGGA | 1 cut(s) | 3142 |
| AoxI | GGCC | 6 cut(s) | 184, 318, 322, 1354, 2122, 3390 |
| ApoI | RAATTY | 7 cut(s) | 1305, 1580, 1941, 2054, 2351, 2868, 3138 |
| AseI | ATTAAT | 3 cut(s) | 1623, 2151, 3000 |
| AsiGI | ACCGGT | 3 cut(s) | 222, 236, 697 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 38, 1152, 1422, 2326, 2700 |
| Asp718I | GGTACC | 1 cut(s) | 233 |
| AspA2I | CCTAGG | 1 cut(s) | 2969 |
| AspLEI | GCGC | 5 cut(s) | 105, 206, 450, 2800, 2805 |
| AspS9I | GGNCC | 5 cut(s) | 189, 323, 542, 1243, 2513 |
| AsuC2I | CCSGG | 8 cut(s) | 140, 141, 616, 773, 784, 1296, 1764, 2368 |
| AsuHPI | GGTGA | 8 cut(s) | 449, 808, 1200, 1408, 2382, 2507, 3323, 3517 |
| AsuII | TTCGAA | 2 cut(s) | 1449, 3349 |
| AvaI | CYCGRG | 2 cut(s) | 139, 269 |
| AvaII | GGWCC | 4 cut(s) | 189, 542, 1243, 2513 |
| AvrII | CCTAGG | 1 cut(s) | 2969 |
| AxyI | CCTNAGG | 1 cut(s) | 2517 |
| BalI | TGGCCA | 1 cut(s) | 2124 |
| BamHI | GGATCC | 1 cut(s) | 2974 |
| BanI | GGYRCC | 2 cut(s) | 203, 233 |
| BanII | GRGCYC | 1 cut(s) | 305 |
| Bbv12I | GWGCWC | 1 cut(s) | 2657 |
| BccI | CCATC | 9 cut(s) | 83, 474, 727, 1204, 1765, 2401, 2702, 3089, 3496 |
| BceAI | ACGGC | 2 cut(s) | 232, 2568 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3176, 3210 |
| BciT130I | CCWGG | 4 cut(s) | 794, 1887, 2297, 3129 |
| BclI | TGATCA | 2 cut(s) | 1381, 2497 |
| BcnI | CCSGG | 8 cut(s) | 140, 141, 616, 773, 784, 1296, 1764, 2368 |
| BcoDI | GTCTC | 6 cut(s) | 1794, 1995, 2207, 2294, 2409, 2717 |
| BfaI | CTAG | 6 cut(s) | 257, 462, 1655, 1736, 2507, 2970 |
| BfmI | CTRYAG | 4 cut(s) | 282, 363, 1200, 1957 |
| BfoI | RGCGCY | 1 cut(s) | 207 |
| BfrI | CTTAAG | 2 cut(s) | 1946, 2815 |
| BfuAI | ACCTGC | 3 cut(s) | 170, 553, 2782 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3464 |
| BglII | AGATCT | 3 cut(s) | 2002, 2188, 2743 |
| BlnI | CCTAGG | 1 cut(s) | 2969 |
| BmcAI | AGTACT | 1 cut(s) | 344 |
| Bme18I | GGWCC | 4 cut(s) | 189, 542, 1243, 2513 |
| BmeT110I | CYCGRG | 2 cut(s) | 139, 269 |
| BmgBI | CACGTC | 2 cut(s) | 938, 2892 |
| BmgT120I | GGNCC | 5 cut(s) | 189, 323, 542, 1243, 2513 |
| BmiI | GGNNCC | 6 cut(s) | 35, 205, 235, 1543, 2755, 2976 |
| BmrI | ACTGGG | 2 cut(s) | 2029, 2191 |
| BmsI | GCATC | 6 cut(s) | 745, 1036, 3037, 3161, 3528, 3532 |
| BmuI | ACTGGG | 2 cut(s) | 2029, 2191 |
| Bpu14I | TTCGAA | 2 cut(s) | 1449, 3349 |
| BpuEI | CTTGAG | 7 cut(s) | 136, 299, 542, 1494, 1763, 2006, 2570 |
| BpuMI | CCSGG | 8 cut(s) | 140, 141, 616, 773, 784, 1296, 1764, 2368 |
| Bsa29I | ATCGAT | 2 cut(s) | 959, 2396 |
| BsaAI | YACGTR | 1 cut(s) | 3385 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2028, 2502 |
| BsaHI | GRCGYC | 2 cut(s) | 204, 3467 |
| BsaI | GGTCTC | 2 cut(s) | 2409, 2717 |
| BsaJI | CCNNGG | 6 cut(s) | 138, 139, 783, 2296, 2969, 3341 |
| BsaWI | WCCGGW | 6 cut(s) | 175, 191, 222, 236, 697, 3142 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 675, 705 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 49, 143, 182, 257, 1202, 1763 |
| Bse118I | RCCGGY | 5 cut(s) | 182, 222, 236, 320, 697 |
| Bse1I | ACTGG | 2 cut(s) | 2024, 2197 |
| Bse21I | CCTNAGG | 1 cut(s) | 2517 |
| Bse3DI | GCAATG | 2 cut(s) | 2350, 2855 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2028, 2502 |
| BseAI | TCCGGA | 1 cut(s) | 3142 |
| BseBI | CCWGG | 4 cut(s) | 794, 1887, 2297, 3129 |
| BseCI | ATCGAT | 2 cut(s) | 959, 2396 |
| BseDI | CCNNGG | 6 cut(s) | 138, 139, 783, 2296, 2969, 3341 |
| BseGI | GGATG | 7 cut(s) | 538, 807, 1177, 2029, 2292, 3176, 3519 |
| BseJI | GATNNNNATC | 2 cut(s) | 2028, 2502 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 49, 143, 182, 257, 1202, 1763 |
| BseMI | GCAATG | 2 cut(s) | 2350, 2855 |
| BseMII | CTCAG | 4 cut(s) | 360, 2617, 2689, 3070 |
| BseNI | ACTGG | 2 cut(s) | 2024, 2197 |
| BseX3I | CGGCCG | 1 cut(s) | 184 |
| BseYI | CCCAGC | 2 cut(s) | 17, 330 |
| BsgI | GTGCAG | 2 cut(s) | 2872, 3111 |
| Bsh1236I | CGCG | 3 cut(s) | 105, 448, 2805 |
| Bsh1285I | CGRYCG | 2 cut(s) | 176, 187 |
| BshFI | GGCC | 6 cut(s) | 186, 320, 324, 1356, 2124, 3392 |
| BshNI | GGYRCC | 2 cut(s) | 203, 233 |
| BshTI | ACCGGT | 3 cut(s) | 222, 236, 697 |
| BshVI | ATCGAT | 2 cut(s) | 959, 2396 |
| BsiEI | CGRYCG | 2 cut(s) | 176, 187 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2657 |
| BsiHKCI | CYCGRG | 2 cut(s) | 139, 269 |
| BslFI | GGGAC | 2 cut(s) | 800, 2383 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 49, 143, 182, 257, 1202, 1763 |
| BsmAI | GTCTC | 6 cut(s) | 1794, 1995, 2207, 2294, 2409, 2717 |
| BsmBI | CGTCTC | 1 cut(s) | 2207 |
| BsmFI | GGGAC | 2 cut(s) | 800, 2383 |
| BsmI | GAATGC | 3 cut(s) | 1737, 2700, 2927 |
| BsnI | GGCC | 6 cut(s) | 186, 320, 324, 1356, 2124, 3392 |
| Bso31I | GGTCTC | 2 cut(s) | 2409, 2717 |
| BsoBI | CYCGRG | 2 cut(s) | 139, 269 |
| Bsp119I | TTCGAA | 2 cut(s) | 1449, 3349 |
| Bsp1286I | GDGCHC | 2 cut(s) | 305, 2657 |
| Bsp13I | TCCGGA | 1 cut(s) | 3142 |
| Bsp19I | CCATGG | 1 cut(s) | 3341 |
| BspANI | GGCC | 6 cut(s) | 186, 320, 324, 1356, 2124, 3392 |
| BspCNI | CTCAG | 4 cut(s) | 359, 2616, 2688, 3069 |
| BspDI | ATCGAT | 2 cut(s) | 959, 2396 |
| BspEI | TCCGGA | 1 cut(s) | 3142 |
| BspFNI | CGCG | 3 cut(s) | 105, 448, 2805 |
| BspHI | TCATGA | 1 cut(s) | 3538 |
| BspLI | GGNNCC | 6 cut(s) | 35, 205, 235, 1543, 2755, 2976 |
| BspMAI | CTGCAG | 3 cut(s) | 286, 367, 1961 |
| BspMI | ACCTGC | 3 cut(s) | 170, 553, 2782 |
| BspPI | GGATC | 5 cut(s) | 236, 710, 2955, 2969, 2982 |
| BspQI | GCTCTTC | 3 cut(s) | 1428, 1875, 2894 |
| BspT104I | TTCGAA | 2 cut(s) | 1449, 3349 |
| BspT107I | GGYRCC | 2 cut(s) | 203, 233 |
| BspTI | CTTAAG | 2 cut(s) | 1946, 2815 |
| BspTNI | GGTCTC | 2 cut(s) | 2409, 2717 |
| BsrDI | GCAATG | 2 cut(s) | 2350, 2855 |
| BsrFI | RCCGGY | 5 cut(s) | 182, 222, 236, 320, 697 |
| BsrI | ACTGG | 2 cut(s) | 2024, 2197 |
| BssAI | RCCGGY | 5 cut(s) | 182, 222, 236, 320, 697 |
| BssECI | CCNNGG | 6 cut(s) | 138, 139, 783, 2296, 2969, 3341 |
| BssNAI | GTATAC | 1 cut(s) | 3534 |
| BssNI | GRCGYC | 2 cut(s) | 204, 3467 |
| BssT1I | CCWWGG | 2 cut(s) | 2969, 3341 |
| Bst1107I | GTATAC | 1 cut(s) | 3534 |
| Bst2UI | CCWGG | 4 cut(s) | 794, 1887, 2297, 3129 |
| Bst4CI | ACNGT | 9 cut(s) | 247, 648, 672, 1065, 1178, 1934, 2234, 2644, 3329 |
| Bst6I | CTCTTC | 4 cut(s) | 1428, 1875, 1998, 2894 |
| BstACI | GRCGYC | 2 cut(s) | 204, 3467 |
| BstAFI | CTTAAG | 2 cut(s) | 1946, 2815 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1834 |
| BstBAI | YACGTR | 1 cut(s) | 3385 |
| BstBI | TTCGAA | 2 cut(s) | 1449, 3349 |
| BstC8I | GCNNGC | 4 cut(s) | 322, 1917, 2779, 2807 |
| BstDSI | CCRYGG | 1 cut(s) | 3341 |
| BstEII | GGTNACC | 1 cut(s) | 1206 |
| BstF5I | GGATG | 7 cut(s) | 538, 807, 1177, 2029, 2292, 3176, 3519 |
| BstFNI | CGCG | 3 cut(s) | 105, 448, 2805 |
| BstH2I | RGCGCY | 1 cut(s) | 207 |
| BstHHI | GCGC | 5 cut(s) | 105, 206, 450, 2800, 2805 |
| BstMAI | GTCTC | 6 cut(s) | 1794, 1995, 2207, 2294, 2409, 2717 |
| BstMCI | CGRYCG | 2 cut(s) | 176, 187 |
| BstNI | CCWGG | 4 cut(s) | 794, 1887, 2297, 3129 |
| BstNSI | RCATGY | 7 cut(s) | 728, 1695, 1828, 3282, 3412, 3487, 3529 |
| BstPI | GGTNACC | 1 cut(s) | 1206 |
| BstSFI | CTRYAG | 4 cut(s) | 282, 363, 1200, 1957 |
| BstUI | CGCG | 3 cut(s) | 105, 448, 2805 |
| BstX2I | RGATCY | 5 cut(s) | 715, 2002, 2188, 2743, 2974 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 1495, 2132, 2400 |
| BstYI | RGATCY | 5 cut(s) | 715, 2002, 2188, 2743, 2974 |
| BstZ17I | GTATAC | 1 cut(s) | 3534 |
| BstZI | CGGCCG | 1 cut(s) | 184 |
| Bsu15I | ATCGAT | 2 cut(s) | 959, 2396 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2517 |
| BsuRI | GGCC | 6 cut(s) | 186, 320, 324, 1356, 2124, 3392 |
| BsuTUI | ATCGAT | 2 cut(s) | 959, 2396 |
| BtgI | CCRYGG | 1 cut(s) | 3341 |
| BtrI | CACGTC | 2 cut(s) | 938, 2892 |
| BtsCI | GGATG | 7 cut(s) | 538, 807, 1177, 2029, 2292, 3176, 3519 |
| BtsI | GCAGTG | 1 cut(s) | 2466 |
| BtsIMutI | CAGTG | 4 cut(s) | 2204, 2466, 2683, 2843 |
| BveI | ACCTGC | 3 cut(s) | 170, 553, 2782 |
| Cac8I | GCNNGC | 4 cut(s) | 322, 1917, 2779, 2807 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2610, 2682 |
| CciI | TCATGA | 1 cut(s) | 3538 |
| CfoI | GCGC | 5 cut(s) | 105, 206, 450, 2800, 2805 |
| Cfr10I | RCCGGY | 5 cut(s) | 182, 222, 236, 320, 697 |
| Cfr13I | GGNCC | 5 cut(s) | 189, 323, 542, 1243, 2513 |
| Cfr9I | CCCGGG | 1 cut(s) | 139 |
| ClaI | ATCGAT | 2 cut(s) | 959, 2396 |
| CpoI | CGGWCCG | 1 cut(s) | 189 |
| CseI | GACGC | 2 cut(s) | 1626, 3456 |
| CsiI | ACCWGGT | 1 cut(s) | 792 |
| CspAI | ACCGGT | 3 cut(s) | 222, 236, 697 |
| CspI | CGGWCCG | 1 cut(s) | 189 |
| DinI | GGCGCC | 1 cut(s) | 205 |
| EaeI | YGGCCR | 2 cut(s) | 184, 2122 |
| EagI | CGGCCG | 1 cut(s) | 184 |
| Eam1104I | CTCTTC | 4 cut(s) | 1428, 1875, 1998, 2894 |
| EarI | CTCTTC | 4 cut(s) | 1428, 1875, 1998, 2894 |
| EclXI | CGGCCG | 1 cut(s) | 184 |
| Eco130I | CCWWGG | 2 cut(s) | 2969, 3341 |
| Eco147I | AGGCCT | 1 cut(s) | 1356 |
| Eco24I | GRGCYC | 1 cut(s) | 305 |
| Eco31I | GGTCTC | 2 cut(s) | 2409, 2717 |
| Eco32I | GATATC | 4 cut(s) | 859, 2012, 2959, 3222 |
| Eco47I | GGWCC | 4 cut(s) | 189, 542, 1243, 2513 |
| Eco52I | CGGCCG | 1 cut(s) | 184 |
| Eco57I | CTGAAG | 5 cut(s) | 1409, 1998, 2199, 2819, 3190 |
| Eco81I | CCTNAGG | 1 cut(s) | 2517 |
| Eco88I | CYCGRG | 2 cut(s) | 139, 269 |
| Eco91I | GGTNACC | 1 cut(s) | 1206 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1243 |
| EcoO65I | GGTNACC | 1 cut(s) | 1206 |
| EcoRI | GAATTC | 1 cut(s) | 2351 |
| EcoRII | CCWGG | 4 cut(s) | 792, 1885, 2295, 3127 |
| EcoRV | GATATC | 4 cut(s) | 859, 2012, 2959, 3222 |
| EcoT14I | CCWWGG | 2 cut(s) | 2969, 3341 |
| EcoT22I | ATGCAT | 2 cut(s) | 971, 1830 |
| EcoT38I | GRGCYC | 1 cut(s) | 305 |
| EgeI | GGCGCC | 1 cut(s) | 205 |
| EheI | GGCGCC | 1 cut(s) | 205 |
| ErhI | CCWWGG | 2 cut(s) | 2969, 3341 |
| Esp3I | CGTCTC | 1 cut(s) | 2207 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1956, 1988, 3275, 3307 |
| FaqI | GGGAC | 2 cut(s) | 800, 2383 |
| FauI | CCCGC | 7 cut(s) | 4, 16, 51, 98, 114, 120, 915 |
| FauNDI | CATATG | 2 cut(s) | 2085, 2529 |
| FbaI | TGATCA | 2 cut(s) | 1381, 2497 |
| FblI | GTMKAC | 1 cut(s) | 3533 |
| FokI | GGATG | 7 cut(s) | 545, 814, 1184, 2036, 2279, 3183, 3506 |
| FriOI | GRGCYC | 1 cut(s) | 305 |
| FseI | GGCCGGCC | 1 cut(s) | 324 |
| FspBI | CTAG | 6 cut(s) | 257, 462, 1655, 1736, 2507, 2970 |
| GlaI | GCGC | 5 cut(s) | 104, 205, 449, 2799, 2804 |
| GsaI | CCCAGC | 2 cut(s) | 21, 334 |
| HaeII | RGCGCY | 1 cut(s) | 207 |
| HaeIII | GGCC | 6 cut(s) | 186, 320, 324, 1356, 2124, 3392 |
| HgaI | GACGC | 2 cut(s) | 1626, 3456 |
| HhaI | GCGC | 5 cut(s) | 105, 206, 450, 2800, 2805 |
| Hin1I | GRCGYC | 2 cut(s) | 204, 3467 |
| Hin6I | GCGC | 5 cut(s) | 103, 204, 448, 2798, 2803 |
| HinP1I | GCGC | 5 cut(s) | 103, 204, 448, 2798, 2803 |
| HincII | GTYRAC | 2 cut(s) | 679, 3373 |
| HindII | GTYRAC | 2 cut(s) | 679, 3373 |
| HindIII | AAGCTT | 5 cut(s) | 575, 813, 2170, 2414, 2831 |
| HpaI | GTTAAC | 1 cut(s) | 679 |
| HphI | GGTGA | 8 cut(s) | 449, 808, 1200, 1408, 2382, 2507, 3323, 3517 |
| Hpy99I | CGWCG | 1 cut(s) | 1620 |
| HpyCH4III | ACNGT | 9 cut(s) | 247, 648, 672, 1065, 1178, 1934, 2234, 2644, 3329 |
| HpyCH4IV | ACGT | 9 cut(s) | 455, 690, 937, 1263, 2359, 2484, 2891, 2914, 3384 |
| HpySE526I | ACGT | 9 cut(s) | 455, 690, 937, 1263, 2359, 2484, 2891, 2914, 3384 |
| Hsp92I | GRCGYC | 2 cut(s) | 204, 3467 |
| HspAI | GCGC | 5 cut(s) | 103, 204, 448, 2798, 2803 |
| KasI | GGCGCC | 1 cut(s) | 203 |
| Kpn2I | TCCGGA | 1 cut(s) | 3142 |
| KpnI | GGTACC | 1 cut(s) | 237 |
| KroI | GCCGGC | 1 cut(s) | 320 |
| KroNI | GCCGGC | 1 cut(s) | 322 |
| Ksp22I | TGATCA | 2 cut(s) | 1381, 2497 |
| KspAI | GTTAAC | 1 cut(s) | 679 |
| LguI | GCTCTTC | 3 cut(s) | 1428, 1875, 2894 |
| LmnI | GCTCC | 3 cut(s) | 774, 2971, 3030 |
| LweI | GCATC | 6 cut(s) | 745, 1036, 3037, 3161, 3528, 3532 |
| MabI | ACCWGGT | 1 cut(s) | 792 |
| MaeI | CTAG | 6 cut(s) | 257, 462, 1655, 1736, 2507, 2970 |
| MaeII | ACGT | 9 cut(s) | 455, 690, 937, 1263, 2359, 2484, 2891, 2914, 3384 |
| MaeIII | GTNAC | 7 cut(s) | 938, 1102, 1206, 1336, 1396, 1901, 2228 |
| MfeI | CAATTG | 4 cut(s) | 759, 906, 2821, 3068 |
| MflI | RGATCY | 5 cut(s) | 715, 2002, 2188, 2743, 2974 |
| MhlI | GDGCHC | 2 cut(s) | 305, 2657 |
| MlsI | TGGCCA | 1 cut(s) | 2124 |
| MluNI | TGGCCA | 1 cut(s) | 2124 |
| Mly113I | GGCGCC | 1 cut(s) | 204 |
| MlyI | GAGTC | 4 cut(s) | 901, 1451, 1997, 3231 |
| MmeI | TCCRAC | 2 cut(s) | 907, 2491 |
| Mox20I | TGGCCA | 1 cut(s) | 2124 |
| Mph1103I | ATGCAT | 2 cut(s) | 971, 1830 |
| MroI | TCCGGA | 1 cut(s) | 3142 |
| MroNI | GCCGGC | 1 cut(s) | 320 |
| MroXI | GAANNNNTTC | 5 cut(s) | 38, 1152, 1422, 2326, 2700 |
| MscI | TGGCCA | 1 cut(s) | 2124 |
| MslI | CAYNNNNRTG | 5 cut(s) | 471, 1910, 3283, 3330, 3524 |
| Msp20I | TGGCCA | 1 cut(s) | 2124 |
| MspA1I | CMGCKG | 5 cut(s) | 368, 1162, 3227, 3306, 3492 |
| MspCI | CTTAAG | 2 cut(s) | 1946, 2815 |
| MteI | GCGCNGCGC | 1 cut(s) | 2801 |
| MunI | CAATTG | 4 cut(s) | 759, 906, 2821, 3068 |
| Mva1269I | GAATGC | 3 cut(s) | 1737, 2700, 2927 |
| MvaI | CCWGG | 4 cut(s) | 794, 1887, 2297, 3129 |
| MvnI | CGCG | 3 cut(s) | 105, 448, 2805 |
| NaeI | GCCGGC | 1 cut(s) | 322 |
| NarI | GGCGCC | 1 cut(s) | 204 |
| NciI | CCSGG | 8 cut(s) | 140, 141, 616, 773, 784, 1296, 1764, 2368 |
| NcoI | CCATGG | 1 cut(s) | 3341 |
| NdeI | CATATG | 2 cut(s) | 2085, 2529 |
| NgoMIV | GCCGGC | 1 cut(s) | 320 |
| NlaIV | GGNNCC | 6 cut(s) | 35, 205, 235, 1543, 2755, 2976 |
| NmeAIII | GCCGAG | 1 cut(s) | 244 |
| NmuCI | GTSAC | 3 cut(s) | 938, 1206, 1396 |
| NsiI | ATGCAT | 2 cut(s) | 971, 1830 |
| NspI | RCATGY | 7 cut(s) | 728, 1695, 1828, 3282, 3412, 3487, 3529 |
| NspV | TTCGAA | 2 cut(s) | 1449, 3349 |
| PagI | TCATGA | 1 cut(s) | 3538 |
| PceI | AGGCCT | 1 cut(s) | 1356 |
| PciI | ACATGT | 3 cut(s) | 724, 3278, 3408 |
| PciSI | GCTCTTC | 3 cut(s) | 1428, 1875, 2894 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 452, 687 |
| PctI | GAATGC | 3 cut(s) | 1737, 2700, 2927 |
| PdiI | GCCGGC | 1 cut(s) | 322 |
| PdmI | GAANNNNTTC | 5 cut(s) | 38, 1152, 1422, 2326, 2700 |
| PfeI | GAWTC | 7 cut(s) | 63, 133, 956, 1329, 2128, 2455, 3346 |
| PfoI | TCCNGGA | 2 cut(s) | 1762, 2366 |
| PinAI | ACCGGT | 3 cut(s) | 222, 236, 697 |
| PleI | GAGTC | 4 cut(s) | 900, 1451, 1996, 3231 |
| PluTI | GGCGCC | 1 cut(s) | 207 |
| PpsI | GAGTC | 4 cut(s) | 900, 1451, 1996, 3231 |
| Ppu21I | YACGTR | 1 cut(s) | 3385 |
| PpuMI | RGGWCCY | 1 cut(s) | 1243 |
| PscI | ACATGT | 3 cut(s) | 724, 3278, 3408 |
| PshBI | ATTAAT | 3 cut(s) | 1623, 2151, 3000 |
| Psp1406I | AACGTT | 1 cut(s) | 690 |
| Psp5II | RGGWCCY | 1 cut(s) | 1243 |
| Psp6I | CCWGG | 4 cut(s) | 792, 1885, 2295, 3127 |
| PspEI | GGTNACC | 1 cut(s) | 1206 |
| PspFI | CCCAGC | 2 cut(s) | 17, 330 |
| PspGI | CCWGG | 4 cut(s) | 792, 1885, 2295, 3127 |
| PspN4I | GGNNCC | 6 cut(s) | 35, 205, 235, 1543, 2755, 2976 |
| PspPI | GGNCC | 5 cut(s) | 189, 323, 542, 1243, 2513 |
| PspPPI | RGGWCCY | 1 cut(s) | 1243 |
| PstI | CTGCAG | 3 cut(s) | 286, 367, 1961 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2610, 2682 |
| PsuI | RGATCY | 5 cut(s) | 715, 2002, 2188, 2743, 2974 |
| PvuII | CAGCTG | 2 cut(s) | 368, 1162 |
| RigI | GGCCGGCC | 1 cut(s) | 324 |
| RseI | CAYNNNNRTG | 5 cut(s) | 471, 1910, 3283, 3330, 3524 |
| Rsr2I | CGGWCCG | 1 cut(s) | 189 |
| RsrII | CGGWCCG | 1 cut(s) | 189 |
| SapI | GCTCTTC | 3 cut(s) | 1428, 1875, 2894 |
| Sau96I | GGNCC | 5 cut(s) | 189, 323, 542, 1243, 2513 |
| ScaI | AGTACT | 1 cut(s) | 344 |
| SchI | GAGTC | 4 cut(s) | 901, 1451, 1997, 3231 |
| SduI | GDGCHC | 2 cut(s) | 305, 2657 |
| SexAI | ACCWGGT | 1 cut(s) | 792 |
| SfaNI | GCATC | 6 cut(s) | 745, 1036, 3037, 3161, 3528, 3532 |
| SfcI | CTRYAG | 4 cut(s) | 282, 363, 1200, 1957 |
| SfoI | GGCGCC | 1 cut(s) | 205 |
| SfuI | TTCGAA | 2 cut(s) | 1449, 3349 |
| SinI | GGWCC | 4 cut(s) | 189, 542, 1243, 2513 |
| SmaI | CCCGGG | 1 cut(s) | 141 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 471, 1910, 3283, 3330, 3524 |
| SmlI | CTYRAG | 9 cut(s) | 115, 314, 521, 1509, 1778, 1946, 1985, 2549, 2815 |
| SmoI | CTYRAG | 9 cut(s) | 115, 314, 521, 1509, 1778, 1946, 1985, 2549, 2815 |
| SseBI | AGGCCT | 1 cut(s) | 1356 |
| SspDI | GGCGCC | 1 cut(s) | 203 |
| SspI | AATATT | 4 cut(s) | 1289, 1438, 2042, 2424 |
| SspMI | CTAG | 6 cut(s) | 257, 462, 1655, 1736, 2507, 2970 |
| StuI | AGGCCT | 1 cut(s) | 1356 |
| StyI | CCWWGG | 2 cut(s) | 2969, 3341 |
| TaaI | ACNGT | 9 cut(s) | 247, 648, 672, 1065, 1178, 1934, 2234, 2644, 3329 |
| TaiI | ACGT | 9 cut(s) | 458, 693, 940, 1266, 2362, 2487, 2894, 2917, 3387 |
| TaqII | GACCGA | 1 cut(s) | 2636 |
| TatI | WGTACW | 2 cut(s) | 342, 2016 |
| TauI | GCSGC | 2 cut(s) | 168, 3495 |
| TfiI | GAWTC | 7 cut(s) | 63, 133, 956, 1329, 2128, 2455, 3346 |
| TscAI | CASTG | 4 cut(s) | 2204, 2473, 2683, 2843 |
| TseFI | GTSAC | 3 cut(s) | 938, 1206, 1396 |
| Tsp45I | GTSAC | 3 cut(s) | 938, 1206, 1396 |
| TspGWI | ACGGA | 4 cut(s) | 696, 745, 1121, 1534 |
| TspMI | CCCGGG | 1 cut(s) | 139 |
| TspRI | CASTG | 4 cut(s) | 2204, 2473, 2683, 2843 |
| Vha464I | CTTAAG | 2 cut(s) | 1946, 2815 |
| VpaK11BI | GGWCC | 4 cut(s) | 189, 542, 1243, 2513 |
| VspI | ATTAAT | 3 cut(s) | 1623, 2151, 3000 |
| XapI | RAATTY | 7 cut(s) | 1305, 1580, 1941, 2054, 2351, 2868, 3138 |
| XceI | RCATGY | 7 cut(s) | 728, 1695, 1828, 3282, 3412, 3487, 3529 |
| XmaI | CCCGGG | 1 cut(s) | 139 |
| XmaJI | CCTAGG | 1 cut(s) | 2969 |
| XmiI | GTMKAC | 1 cut(s) | 3533 |
| XmnI | GAANNNNTTC | 5 cut(s) | 38, 1152, 1422, 2326, 2700 |
| XspI | CTAG | 6 cut(s) | 257, 462, 1655, 1736, 2507, 2970 |
| ZrmI | AGTACT | 1 cut(s) | 344 |
| Zsp2I | ATGCAT | 2 cut(s) | 971, 1830 |