Toll - interleukin 1 - resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 47 - 225 | 2.7e-50 | TIR domain |
| TIR_2 | PF13676 | 50 - 168 | 4.1e-12 | TIR domain |
| NB-ARC | PF00931 | 239 - 396 | 8.2e-20 | NB-ARC domain |
| NACHT | PF05729 | 248 - 388 | 3.3e-06 | NACHT domain |
| WHD_ROQ1 | PF23282 | 466 - 536 | 1e-18 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_3 | PF07725 | 638 - 657 | 2.8e-06 | Leucine Rich Repeat |
| LRR_14 | PF23598 | 803 - 915 | 1.6e-06 | Leucine-rich repeat region |
| LRR_Zer-1 | PF25013 | 836 - 901 | 2.4e-06 | Zer-1-like, Leucine-rich repeats |
| LRR_13 | PF23286 | 890 - 959 | 1.9e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 894 - 975 | 2.3e-06 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 961 - 1138 | 1e-10 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 982 - 1062 | 3.3e-11 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1206 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2424 |
| Acc36I | ACCTGC | 2 cut(s) | 283, 3286 |
| AccI | GTMKAC | 1 cut(s) | 2428 |
| AccII | CGCG | 1 cut(s) | 1168 |
| AciI | CCGC | 6 cut(s) | 464, 1490, 1816, 1892, 2771, 3195 |
| AclI | AACGTT | 1 cut(s) | 490 |
| AclWI | GGATC | 2 cut(s) | 940, 1613 |
| AcoI | YGGCCR | 1 cut(s) | 394 |
| AcsI | RAATTY | 8 cut(s) | 815, 1334, 1883, 2094, 2200, 2542, 2755, 3412 |
| AcuI | CTGAAG | 4 cut(s) | 200, 236, 1691, 2043 |
| AdeI | CACNNNGTG | 1 cut(s) | 348 |
| AfaI | GTAC | 6 cut(s) | 441, 964, 1189, 1668, 3177, 3191 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 132, 133, 286, 967, 1629 |
| AjnI | CCWGG | 1 cut(s) | 2378 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1488, 1520 |
| Alw21I | GWGCWC | 4 cut(s) | 2061, 2486, 2699, 3357 |
| Alw26I | GTCTC | 8 cut(s) | 1524, 1800, 1815, 2326, 2410, 2967, 3110, 3224 |
| Alw44I | GTGCAC | 2 cut(s) | 2057, 2695 |
| AlwI | GGATC | 2 cut(s) | 940, 1613 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 74, 77 |
| AoxI | GGCC | 1 cut(s) | 394 |
| ApaLI | GTGCAC | 2 cut(s) | 2057, 2695 |
| ApoI | RAATTY | 8 cut(s) | 815, 1334, 1883, 2094, 2200, 2542, 2755, 3412 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1000, 1032 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2845, 2994 |
| AspS9I | GGNCC | 4 cut(s) | 272, 627, 970, 1272 |
| AsuC2I | CCSGG | 1 cut(s) | 583 |
| AsuHPI | GGTGA | 3 cut(s) | 98, 179, 714 |
| AsuNHI | GCTAGC | 1 cut(s) | 871 |
| AvaII | GGWCC | 4 cut(s) | 272, 627, 970, 1272 |
| BaeGI | GKGCMC | 2 cut(s) | 2061, 2699 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2147, 2180 |
| BalI | TGGCCA | 1 cut(s) | 396 |
| BanII | GRGCYC | 1 cut(s) | 3357 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1956, 1988 |
| BbsI | GAAGAC | 3 cut(s) | 1308, 1971, 3407 |
| Bbv12I | GWGCWC | 4 cut(s) | 2061, 2486, 2699, 3357 |
| BccI | CCATC | 7 cut(s) | 67, 95, 204, 394, 439, 860, 1373 |
| BceAI | ACGGC | 1 cut(s) | 945 |
| BciT130I | CCWGG | 1 cut(s) | 2380 |
| BciVI | GTATCC | 1 cut(s) | 2864 |
| BcnI | CCSGG | 1 cut(s) | 583 |
| BcoDI | GTCTC | 8 cut(s) | 1524, 1800, 1815, 2326, 2410, 2967, 3110, 3224 |
| BfaI | CTAG | 7 cut(s) | 284, 872, 1019, 1194, 1832, 1916, 3179 |
| BfmI | CTRYAG | 4 cut(s) | 34, 543, 1034, 3082 |
| BfuAI | ACCTGC | 2 cut(s) | 283, 3286 |
| BfuI | GTATCC | 1 cut(s) | 2864 |
| BglII | AGATCT | 6 cut(s) | 595, 1113, 2508, 2721, 2934, 3181 |
| BlpI | GCTNAGC | 1 cut(s) | 956 |
| BmcAI | AGTACT | 2 cut(s) | 1189, 3177 |
| Bme1390I | CCNGG | 2 cut(s) | 583, 2380 |
| Bme18I | GGWCC | 4 cut(s) | 272, 627, 970, 1272 |
| BmgT120I | GGNCC | 4 cut(s) | 272, 627, 970, 1272 |
| BmiI | GGNNCC | 5 cut(s) | 1273, 2517, 2730, 2943, 3259 |
| BmrFI | CCNGG | 2 cut(s) | 583, 2380 |
| BmrI | ACTGGG | 4 cut(s) | 1315, 1394, 1617, 3353 |
| BmtI | GCTAGC | 1 cut(s) | 875 |
| BmuI | ACTGGG | 4 cut(s) | 1315, 1394, 1617, 3353 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2984 |
| BpiI | GAAGAC | 3 cut(s) | 1308, 1971, 3407 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 939, 971, 2558, 2590, 2771, 2803 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3041 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 956 |
| BpuEI | CTTGAG | 9 cut(s) | 359, 1782, 2144, 2312, 2444, 2657, 2870, 3170, 3366 |
| BpuMI | CCSGG | 1 cut(s) | 583 |
| Bsa29I | ATCGAT | 2 cut(s) | 507, 1995 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1659, 3244 |
| BsaI | GGTCTC | 1 cut(s) | 1815 |
| BsaJI | CCNNGG | 5 cut(s) | 181, 1474, 2099, 2378, 2379 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1672, 1702, 3339, 3369 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 132, 133, 286, 967, 1629 |
| Bse1I | ACTGG | 7 cut(s) | 1051, 1310, 1389, 1623, 1868, 1884, 3359 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1659, 3244 |
| BseBI | CCWGG | 1 cut(s) | 2380 |
| BseCI | ATCGAT | 2 cut(s) | 507, 1995 |
| BseDI | CCNNGG | 5 cut(s) | 181, 1474, 2099, 2378, 2379 |
| BseGI | GGATG | 7 cut(s) | 361, 472, 535, 647, 1447, 1537, 1660 |
| BseJI | GATNNNNATC | 2 cut(s) | 1659, 3244 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 132, 133, 286, 967, 1629 |
| BseMII | CTCAG | 4 cut(s) | 910, 970, 2001, 2361 |
| BseNI | ACTGG | 7 cut(s) | 1051, 1310, 1389, 1623, 1868, 1884, 3359 |
| BseRI | GAGGAG | 1 cut(s) | 273 |
| BseSI | GKGCMC | 2 cut(s) | 2061, 2699 |
| BsgI | GTGCAG | 2 cut(s) | 1770, 2332 |
| Bsh1236I | CGCG | 1 cut(s) | 1168 |
| BshFI | GGCC | 1 cut(s) | 396 |
| BshVI | ATCGAT | 2 cut(s) | 507, 1995 |
| BsiHKAI | GWGCWC | 4 cut(s) | 2061, 2486, 2699, 3357 |
| BsiSI | CCGG | 2 cut(s) | 582, 1239 |
| BslFI | GGGAC | 3 cut(s) | 598, 2992, 3053 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 132, 133, 286, 967, 1629 |
| BsmAI | GTCTC | 8 cut(s) | 1524, 1800, 1815, 2326, 2410, 2967, 3110, 3224 |
| BsmFI | GGGAC | 3 cut(s) | 598, 2992, 3053 |
| BsmI | GAATGC | 2 cut(s) | 714, 2607 |
| BsnI | GGCC | 1 cut(s) | 396 |
| Bso31I | GGTCTC | 1 cut(s) | 1815 |
| Bsp1286I | GDGCHC | 4 cut(s) | 2061, 2486, 2699, 3357 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 956 |
| Bsp19I | CCATGG | 1 cut(s) | 1474 |
| BspACI | CCGC | 6 cut(s) | 464, 1490, 1816, 1892, 2771, 3195 |
| BspANI | GGCC | 1 cut(s) | 396 |
| BspCNI | CTCAG | 4 cut(s) | 909, 969, 2002, 2362 |
| BspDI | ATCGAT | 2 cut(s) | 507, 1995 |
| BspFNI | CGCG | 1 cut(s) | 1168 |
| BspHI | TCATGA | 1 cut(s) | 12 |
| BspLI | GGNNCC | 5 cut(s) | 1273, 2517, 2730, 2943, 3259 |
| BspMAI | CTGCAG | 1 cut(s) | 38 |
| BspMI | ACCTGC | 2 cut(s) | 283, 3286 |
| BspOI | GCTAGC | 1 cut(s) | 875 |
| BspPI | GGATC | 2 cut(s) | 940, 1613 |
| BspQI | GCTCTTC | 2 cut(s) | 1582, 2772 |
| BspTNI | GGTCTC | 1 cut(s) | 1815 |
| BsrI | ACTGG | 7 cut(s) | 1051, 1310, 1389, 1623, 1868, 1884, 3359 |
| BssECI | CCNNGG | 5 cut(s) | 181, 1474, 2099, 2378, 2379 |
| BssT1I | CCWWGG | 3 cut(s) | 181, 1474, 2099 |
| Bst2UI | CCWGG | 1 cut(s) | 2380 |
| Bst6I | CTCTTC | 5 cut(s) | 1098, 1582, 1667, 1854, 2772 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 77, 1570 |
| BstC8I | GCNNGC | 6 cut(s) | 733, 873, 1170, 2181, 2344, 3283 |
| BstDSI | CCRYGG | 1 cut(s) | 1474 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 284 |
| BstF5I | GGATG | 7 cut(s) | 361, 472, 535, 647, 1447, 1537, 1660 |
| BstFNI | CGCG | 1 cut(s) | 1168 |
| BstMAI | GTCTC | 8 cut(s) | 1524, 1800, 1815, 2326, 2410, 2967, 3110, 3224 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 77, 80, 1570, 1815, 1930, 3361 |
| BstNI | CCWGG | 1 cut(s) | 2380 |
| BstNSI | RCATGY | 2 cut(s) | 1425, 1933 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2984 |
| BstSCI | CCNGG | 2 cut(s) | 581, 2378 |
| BstSFI | CTRYAG | 4 cut(s) | 34, 543, 1034, 3082 |
| BstSLI | GKGCMC | 2 cut(s) | 2061, 2699 |
| BstUI | CGCG | 1 cut(s) | 1168 |
| BstV2I | GAAGAC | 3 cut(s) | 1308, 1971, 3407 |
| BstX2I | RGATCY | 7 cut(s) | 595, 1113, 1618, 2508, 2721, 2934, 3181 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3154 |
| BstYI | RGATCY | 7 cut(s) | 595, 1113, 1618, 2508, 2721, 2934, 3181 |
| Bsu15I | ATCGAT | 2 cut(s) | 507, 1995 |
| BsuI | GTATCC | 1 cut(s) | 2864 |
| BsuRI | GGCC | 1 cut(s) | 396 |
| BsuTUI | ATCGAT | 2 cut(s) | 507, 1995 |
| BtgI | CCRYGG | 1 cut(s) | 1474 |
| BtsCI | GGATG | 7 cut(s) | 361, 472, 535, 647, 1447, 1537, 1660 |
| BtsI | GCAGTG | 1 cut(s) | 1599 |
| BtsIMutI | CAGTG | 6 cut(s) | 738, 904, 1044, 1599, 1877, 3366 |
| BveI | ACCTGC | 2 cut(s) | 283, 3286 |
| Cac8I | GCNNGC | 6 cut(s) | 733, 873, 1170, 2181, 2344, 3283 |
| CaiI | CAGNNNCTG | 2 cut(s) | 74, 77 |
| CciI | TCATGA | 1 cut(s) | 12 |
| Cfr13I | GGNCC | 4 cut(s) | 272, 627, 970, 1272 |
| ClaI | ATCGAT | 2 cut(s) | 507, 1995 |
| CseI | GACGC | 3 cut(s) | 737, 1011, 1488 |
| Csp6I | GTAC | 6 cut(s) | 440, 963, 1188, 1667, 3176, 3190 |
| CviQI | GTAC | 6 cut(s) | 440, 963, 1188, 1667, 3176, 3190 |
| DraI | TTTAAA | 3 cut(s) | 660, 2914, 3310 |
| DraIII | CACNNNGTG | 1 cut(s) | 348 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2424 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2424 |
| EaeI | YGGCCR | 1 cut(s) | 394 |
| Eam1104I | CTCTTC | 5 cut(s) | 1098, 1582, 1667, 1854, 2772 |
| EarI | CTCTTC | 5 cut(s) | 1098, 1582, 1667, 1854, 2772 |
| Ecl136II | GAGCTC | 1 cut(s) | 3355 |
| Eco130I | CCWWGG | 3 cut(s) | 181, 1474, 2099 |
| Eco24I | GRGCYC | 1 cut(s) | 3357 |
| Eco31I | GGTCTC | 1 cut(s) | 1815 |
| Eco32I | GATATC | 1 cut(s) | 1874 |
| Eco47I | GGWCC | 4 cut(s) | 272, 627, 970, 1272 |
| Eco53kI | GAGCTC | 1 cut(s) | 3355 |
| Eco57I | CTGAAG | 4 cut(s) | 200, 236, 1691, 2043 |
| EcoICRI | GAGCTC | 1 cut(s) | 3355 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 284 |
| EcoO109I | RGGNCCY | 2 cut(s) | 970, 1272 |
| EcoRII | CCWGG | 1 cut(s) | 2378 |
| EcoRV | GATATC | 1 cut(s) | 1874 |
| EcoT14I | CCWWGG | 3 cut(s) | 181, 1474, 2099 |
| EcoT22I | ATGCAT | 2 cut(s) | 472, 1566 |
| EcoT38I | GRGCYC | 1 cut(s) | 3357 |
| ErhI | CCWWGG | 3 cut(s) | 181, 1474, 2099 |
| FaqI | GGGAC | 3 cut(s) | 598, 2992, 3053 |
| FblI | GTMKAC | 1 cut(s) | 2428 |
| FokI | GGATG | 7 cut(s) | 368, 479, 542, 634, 1454, 1524, 1667 |
| FriOI | GRGCYC | 1 cut(s) | 3357 |
| FspBI | CTAG | 7 cut(s) | 284, 872, 1019, 1194, 1832, 1916, 3179 |
| HaeIII | GGCC | 1 cut(s) | 396 |
| HapII | CCGG | 2 cut(s) | 582, 1239 |
| HgaI | GACGC | 3 cut(s) | 737, 1011, 1488 |
| HincII | GTYRAC | 2 cut(s) | 45, 1513 |
| HindII | GTYRAC | 2 cut(s) | 45, 1513 |
| HindIII | AAGCTT | 4 cut(s) | 822, 1952, 2123, 3294 |
| HpaI | GTTAAC | 1 cut(s) | 45 |
| HpaII | CCGG | 2 cut(s) | 582, 1239 |
| HphI | GGTGA | 3 cut(s) | 98, 179, 714 |
| Hpy166II | GTNNAC | 7 cut(s) | 45, 1513, 1628, 1981, 2059, 2429, 2697 |
| Hpy8I | GTNNAC | 7 cut(s) | 45, 1513, 1628, 1981, 2059, 2429, 2697 |
| Hpy99I | CGWCG | 1 cut(s) | 135 |
| HpyAV | CCTTC | 9 cut(s) | 290, 1393, 1432, 1836, 1847, 2201, 2835, 3009, 3153 |
| HpyCH4IV | ACGT | 3 cut(s) | 490, 1015, 1747 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 77, 80, 1570, 1815, 1930, 3361 |
| HpySE526I | ACGT | 3 cut(s) | 490, 1015, 1747 |
| KspAI | GTTAAC | 1 cut(s) | 45 |
| LguI | GCTCTTC | 2 cut(s) | 1582, 2772 |
| LmnI | GCTCC | 5 cut(s) | 1693, 2515, 2728, 2941, 3360 |
| MaeI | CTAG | 7 cut(s) | 284, 872, 1019, 1194, 1832, 1916, 3179 |
| MaeII | ACGT | 3 cut(s) | 490, 1015, 1747 |
| MaeIII | GTNAC | 3 cut(s) | 638, 1373, 1676 |
| MfeI | CAATTG | 1 cut(s) | 1692 |
| MflI | RGATCY | 7 cut(s) | 595, 1113, 1618, 2508, 2721, 2934, 3181 |
| MhlI | GDGCHC | 4 cut(s) | 2061, 2486, 2699, 3357 |
| MlsI | TGGCCA | 1 cut(s) | 396 |
| MluNI | TGGCCA | 1 cut(s) | 396 |
| MlyI | GAGTC | 6 cut(s) | 798, 1802, 2053, 2151, 2434, 2543 |
| MmeI | TCCRAC | 2 cut(s) | 652, 1794 |
| Mox20I | TGGCCA | 1 cut(s) | 396 |
| Mph1103I | ATGCAT | 2 cut(s) | 472, 1566 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2845, 2994 |
| MscI | TGGCCA | 1 cut(s) | 396 |
| MslI | CAYNNNNRTG | 2 cut(s) | 201, 1559 |
| Msp20I | TGGCCA | 1 cut(s) | 396 |
| MspA1I | CMGCKG | 4 cut(s) | 74, 2771, 2984, 3195 |
| MspI | CCGG | 2 cut(s) | 582, 1239 |
| MspR9I | CCNGG | 2 cut(s) | 583, 2380 |
| MssI | GTTTAAAC | 1 cut(s) | 3310 |
| MunI | CAATTG | 1 cut(s) | 1692 |
| Mva1269I | GAATGC | 2 cut(s) | 714, 2607 |
| MvaI | CCWGG | 1 cut(s) | 2380 |
| MvnI | CGCG | 1 cut(s) | 1168 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 77, 80, 1570, 1815, 1930, 3361 |
| NciI | CCSGG | 1 cut(s) | 583 |
| NcoI | CCATGG | 1 cut(s) | 1474 |
| NheI | GCTAGC | 1 cut(s) | 871 |
| NlaIV | GGNNCC | 5 cut(s) | 1273, 2517, 2730, 2943, 3259 |
| NmuCI | GTSAC | 1 cut(s) | 638 |
| NsiI | ATGCAT | 2 cut(s) | 472, 1566 |
| NspI | RCATGY | 2 cut(s) | 1425, 1933 |
| PagI | TCATGA | 1 cut(s) | 12 |
| PasI | CCCWGGG | 1 cut(s) | 2379 |
| PciSI | GCTCTTC | 2 cut(s) | 1582, 2772 |
| PctI | GAATGC | 2 cut(s) | 714, 2607 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2845, 2994 |
| PfeI | GAWTC | 6 cut(s) | 644, 701, 1056, 1844, 2234, 2560 |
| PflFI | GACNNNGTC | 1 cut(s) | 1228 |
| PfoI | TCCNGGA | 1 cut(s) | 581 |
| PleI | GAGTC | 6 cut(s) | 798, 1801, 2052, 2151, 2433, 2542 |
| PmeI | GTTTAAAC | 1 cut(s) | 3310 |
| PpsI | GAGTC | 6 cut(s) | 798, 1801, 2052, 2151, 2433, 2542 |
| PpuMI | RGGWCCY | 2 cut(s) | 970, 1272 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2984 |
| PsiI | TTATAA | 1 cut(s) | 1206 |
| Psp124BI | GAGCTC | 1 cut(s) | 3357 |
| Psp1406I | AACGTT | 1 cut(s) | 490 |
| Psp5II | RGGWCCY | 2 cut(s) | 970, 1272 |
| Psp6I | CCWGG | 1 cut(s) | 2378 |
| PspGI | CCWGG | 1 cut(s) | 2378 |
| PspN4I | GGNNCC | 5 cut(s) | 1273, 2517, 2730, 2943, 3259 |
| PspPI | GGNCC | 4 cut(s) | 272, 627, 970, 1272 |
| PspPPI | RGGWCCY | 2 cut(s) | 970, 1272 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3250, 3282 |
| PstI | CTGCAG | 1 cut(s) | 38 |
| PstNI | CAGNNNCTG | 2 cut(s) | 74, 77 |
| PsuI | RGATCY | 7 cut(s) | 595, 1113, 1618, 2508, 2721, 2934, 3181 |
| PsyI | GACNNNGTC | 1 cut(s) | 1228 |
| PvuII | CAGCTG | 2 cut(s) | 74, 2984 |
| RsaI | GTAC | 6 cut(s) | 441, 964, 1189, 1668, 3177, 3191 |
| RsaNI | GTAC | 6 cut(s) | 440, 963, 1188, 1667, 3176, 3190 |
| RseI | CAYNNNNRTG | 2 cut(s) | 201, 1559 |
| SacI | GAGCTC | 1 cut(s) | 3357 |
| SapI | GCTCTTC | 2 cut(s) | 1582, 2772 |
| Sau96I | GGNCC | 4 cut(s) | 272, 627, 970, 1272 |
| ScaI | AGTACT | 2 cut(s) | 1189, 3177 |
| SchI | GAGTC | 6 cut(s) | 798, 1802, 2053, 2151, 2434, 2543 |
| ScrFI | CCNGG | 2 cut(s) | 583, 2380 |
| SduI | GDGCHC | 4 cut(s) | 2061, 2486, 2699, 3357 |
| SfcI | CTRYAG | 4 cut(s) | 34, 543, 1034, 3082 |
| SinI | GGWCC | 4 cut(s) | 272, 627, 970, 1272 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 201, 1559 |
| SmlI | CTYRAG | 9 cut(s) | 374, 1797, 2159, 2291, 2459, 2672, 2885, 3185, 3381 |
| SmoI | CTYRAG | 9 cut(s) | 374, 1797, 2159, 2291, 2459, 2672, 2885, 3185, 3381 |
| SsiI | CCGC | 6 cut(s) | 464, 1490, 1816, 1892, 2771, 3195 |
| SspI | AATATT | 3 cut(s) | 121, 2188, 2257 |
| SspMI | CTAG | 7 cut(s) | 284, 872, 1019, 1194, 1832, 1916, 3179 |
| SstI | GAGCTC | 1 cut(s) | 3357 |
| StyD4I | CCNGG | 2 cut(s) | 581, 2378 |
| StyI | CCWWGG | 3 cut(s) | 181, 1474, 2099 |
| TaiI | ACGT | 3 cut(s) | 493, 1018, 1750 |
| TaqI | TCGA | 9 cut(s) | 294, 507, 615, 946, 1995, 2583, 2796, 2895, 2988 |
| TatI | WGTACW | 4 cut(s) | 1187, 1666, 3175, 3189 |
| TauI | GCSGC | 2 cut(s) | 1493, 1894 |
| TfiI | GAWTC | 6 cut(s) | 644, 701, 1056, 1844, 2234, 2560 |
| TscAI | CASTG | 6 cut(s) | 745, 904, 1051, 1599, 1884, 3366 |
| TseFI | GTSAC | 1 cut(s) | 638 |
| Tsp45I | GTSAC | 1 cut(s) | 638 |
| TspDTI | ATGAA | 8 cut(s) | 191, 372, 707, 1329, 1359, 1418, 1523, 2537 |
| TspGWI | ACGGA | 3 cut(s) | 468, 602, 1645 |
| TspRI | CASTG | 6 cut(s) | 745, 904, 1051, 1599, 1884, 3366 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1228 |
| VneI | GTGCAC | 2 cut(s) | 2057, 2695 |
| VpaK11BI | GGWCC | 4 cut(s) | 272, 627, 970, 1272 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 284 |
| XapI | RAATTY | 8 cut(s) | 815, 1334, 1883, 2094, 2200, 2542, 2755, 3412 |
| XbaI | TCTAGA | 2 cut(s) | 283, 1831 |
| XceI | RCATGY | 2 cut(s) | 1425, 1933 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 349 |
| XmiI | GTMKAC | 1 cut(s) | 2428 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2845, 2994 |
| XspI | CTAG | 7 cut(s) | 284, 872, 1019, 1194, 1832, 1916, 3179 |
| ZrmI | AGTACT | 2 cut(s) | 1189, 3177 |
| Zsp2I | ATGCAT | 2 cut(s) | 472, 1566 |