Rh3BG299900

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
Physical Location & Seq
Reverse (-)
30110829 .. 30120589
9761 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG299900.1

Sequence Viewer

Length: 1767 bp
ATGAAGAAAAGCTCAGTTGAGATTGAGCAAAGTAATCAGCCAATGCTGAATGTGAAACTATCAGTCAAATCCAGAGGAAAAAATAAAAGCAAAGCTGCTACGGCTGAACAAGCTGCTCAGGTTACCTTTCCCCCTATTACTGAGCGAGCAACAAGTGATGCTGATCCAAGTCAGGTTAAGGGGAGAGTTTTGAAGAAGCCTACCCGACAGAGGAAAGCCCTAAAAGATGTAACCAATGGAATTGCTGTTAGACCCTTTGTTATTCAACCACAAGTTGTTTCACAGGCTCTTAACTCATCTGCTCCTTCTCCCTCAAAGGCCCCTGACCCAAATGATGTTGTGAGTACTCTACTGGGGAAGGATGAGAATGTTTTCATGGGCGGTACAATGTCATTGGTGTGTGCTAGCTCATCTGGGAGGAACATCCTTACCTTGTCGGCCTTCACATTGCCAAGAAAATTCCAGCACAACCCCGGCAGATTCCACTTTCTTGTCAACTCCTACATTACCCTTCTCAATTTCAAAGCCAACCCATTCTCATTCTCATTCTCTTTACCTCAAAATTTCAGTTGGAAAAAAGCTCATTTCTTGCCGAGGTACAGAGTTACAGAGACTGAAGCAAGTAGCTTTAGCAACATTACGGGAACTGGAGCAATTGATTGCTTAGTCATGAGCCAGGACCACATTTCAGATCTTGACATAAAACCTTCAGCCTTCAAACAGATGCATAATCTAAGATTACTCAAGTTACATTTTGAGCGTTACCGGGACCCAATGTCATGCGTCAACAAAGTTCACCTTCCTCGAGGTCTCGAGTGTCTTCCTCAAGCCCTTAGAATTATGCAGTGGGATGGCTACCCTTTGAATTCTCTGCCATCAAAGTTTTGTGCAGAAAAGCTTGTTGAGCTTCGTATGCGGAACAGCCGACTTCAGCGACTTTGGAATAAAGGCCTGAAGATCAATCTTGGGAGCTTAAAACATATCGATCTTAGTGACTCCAAGCACCTGACTGATGCTTCAGCTCTGATTGAGAGCCCAAATCTCGAGAGAATTAATCTTGCATTTTGTACAAGTTTGGTTCAACTTCCTTCTTTTCAGCATCTTGCCAAGCTTACTCATCTCGATCTGCGCAGCTGCTTCAATCTCAAAATTCTCCCAGAGATGCCAGGCAATCTGGAAATCTTACGCTTGAATAGTACTGCAATAGAAGAATTGCCTTCATCAATTTGGTGTCTCGAGAAGCTTCATAGATTGGGTCTTGCAGAATGTGATGAGCTTAAGAATCTTCCAAGCAGCACTTGTAGGCTGAATTCGCTCCGATTTCTTAATCTAAAGGGCTGCCTCTCTCTTGAGTGTTTGCCTGTCGAGCTACCTTCTGGGCTCTACCTTCTGGACTTGAGCAATTGTGAGAGTCTTGGGTGTTTGCCTGTCGAGCTCCCTTCTGGGCTGAAGAACCTGAACTTGACAAATTGCAAGAGTCTTGGGTCTTTGCCTGTCGAGCTACCTTCTGGGCTGACGGATCTGGACTTGAGCAGGCTGAAGAACCTGAACTTGACAAATTGCAAGAGTCTTGGGTCTTTGCCTGTCGAGCTCCCTTCTGGGCCGACGGATCTGGAGTTGAGCTATTGTGAGAGTCTTGGGTGTTTGCCTGTCGAGCTCCCTTCTGGGCTAAAGCACCTGATCTTGAGCAATTGTGAGAGTCTTGGGTGTTTGCCTGTCGAGCTCCCTTCTGGGCTGAAGATCAATCTTGCCATTAATTGTCTTTGA

Protein Analysis

588

Amino Acids

64.92

Weight (kDa)

8.92

Isoelectric Point (pI)

52.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 804
Acc16I TGCGCA 1 cut(s) 1130
AciI CCGC 2 cut(s) 381, 916
AclWI GGATC 3 cut(s) 158, 1527, 1617
AcsI RAATTY 5 cut(s) 458, 562, 865, 1149, 1309
AcuI CTGAAG 8 cut(s) 636, 693, 914, 974, 1002, 1469, 1559, 1757
AfaI GTAC 5 cut(s) 346, 385, 599, 1069, 1198
AfiI CCNNNNNNNGG 1 cut(s) 210
AflII CTTAAG 1 cut(s) 1277
AgsI TTSAA 8 cut(s) 193, 266, 523, 718, 865, 1082, 1141, 1192
AhdI GACNNNNNGTC 1 cut(s) 775
AjnI CCWGG 2 cut(s) 675, 1165
Alw21I GWGCWC 4 cut(s) 1437, 1593, 1659, 1725
Alw26I GTCTC 3 cut(s) 605, 815, 1238
AlwI GGATC 3 cut(s) 158, 1527, 1617
AlwNI CAGNNNCTG 1 cut(s) 614
Ama87I CYCGRG 4 cut(s) 804, 812, 1043, 1235
AoxI GGCC 4 cut(s) 318, 438, 949, 1601
ApeKI GCWGC 6 cut(s) 95, 113, 1131, 1134, 1293, 1338
ApoI RAATTY 5 cut(s) 458, 562, 865, 1149, 1309
AseI ATTAAT 2 cut(s) 1053, 1755
Asp700I GAANNNNTTC 1 cut(s) 371
AspLEI GCGC 1 cut(s) 1131
AspS9I GGNCC 4 cut(s) 319, 679, 769, 1601
AsuC2I CCSGG 2 cut(s) 474, 767
AsuHPI GGTGA 1 cut(s) 788
AsuNHI GCTAGC 1 cut(s) 404
AvaI CYCGRG 4 cut(s) 804, 812, 1043, 1235
AvaII GGWCC 2 cut(s) 679, 769
BanII GRGCYC 6 cut(s) 1037, 1383, 1437, 1593, 1659, 1725
BbsI GAAGAC 1 cut(s) 812
Bbv12I GWGCWC 4 cut(s) 1437, 1593, 1659, 1725
BbvI GCAGC 6 cut(s) 82, 100, 1121, 1143, 1305, 1325
BccI CCATC 2 cut(s) 845, 883
BceAI ACGGC 1 cut(s) 117
BciT130I CCWGG 2 cut(s) 677, 1167
BcnI CCSGG 2 cut(s) 474, 767
BcoDI GTCTC 3 cut(s) 605, 815, 1238
BfaI CTAG 1 cut(s) 405
BfrI CTTAAG 1 cut(s) 1277
BglII AGATCT 1 cut(s) 691
BisI GCNGC 6 cut(s) 96, 114, 1132, 1135, 1294, 1339
BlsI GCNGC 6 cut(s) 97, 115, 1133, 1136, 1295, 1340
BmcAI AGTACT 2 cut(s) 346, 1198
Bme1390I CCNGG 4 cut(s) 474, 677, 767, 1167
Bme18I GGWCC 2 cut(s) 679, 769
BmeRI GACNNNNNGTC 1 cut(s) 775
BmeT110I CYCGRG 4 cut(s) 804, 812, 1043, 1235
BmgT120I GGNCC 4 cut(s) 319, 679, 769, 1601
BmiI GGNNCC 3 cut(s) 321, 770, 771
BmrFI CCNGG 4 cut(s) 474, 677, 767, 1167
BmrI ACTGGG 1 cut(s) 362
BmsI GCATC 5 cut(s) 148, 714, 1003, 1108, 1152
BmtI GCTAGC 1 cut(s) 408
BmuI ACTGGG 1 cut(s) 362
BpiI GAAGAC 1 cut(s) 812
BpmI CTGGAG 2 cut(s) 669, 1634
Bpu10I CCTNAGC 1 cut(s) 117
BpuEI CTTGAG 6 cut(s) 728, 810, 1370, 1417, 1549, 1705
BpuMI CCSGG 2 cut(s) 474, 767
Bsa29I ATCGAT 1 cut(s) 984
BsaBI GATNNNNATC 1 cut(s) 162
BsaI GGTCTC 1 cut(s) 815
BsaJI CCNNGG 2 cut(s) 472, 593
Bsc4I CCNNNNNNNGG 1 cut(s) 210
Bse1I ACTGG 2 cut(s) 357, 652
Bse3DI GCAATG 1 cut(s) 446
Bse8I GATNNNNATC 1 cut(s) 162
BseBI CCWGG 2 cut(s) 677, 1167
BseCI ATCGAT 1 cut(s) 984
BseDI CCNNGG 2 cut(s) 472, 593
BseGI GGATG 3 cut(s) 367, 423, 856
BseJI GATNNNNATC 1 cut(s) 162
BseLI CCNNNNNNNGG 1 cut(s) 210
BseMI GCAATG 1 cut(s) 446
BseMII CTCAG 3 cut(s) 27, 131, 132
BseNI ACTGG 2 cut(s) 357, 652
BseXI GCAGC 6 cut(s) 82, 100, 1121, 1143, 1305, 1325
BsgI GTGCAG 1 cut(s) 909
BshFI GGCC 4 cut(s) 320, 440, 951, 1603
BshVI ATCGAT 1 cut(s) 984
BsiHKAI GWGCWC 4 cut(s) 1437, 1593, 1659, 1725
BsiHKCI CYCGRG 4 cut(s) 804, 812, 1043, 1235
BsiSI CCGG 2 cut(s) 474, 766
BslFI GGGAC 1 cut(s) 782
BslI CCNNNNNNNGG 1 cut(s) 210
BsmAI GTCTC 3 cut(s) 605, 815, 1238
BsmFI GGGAC 1 cut(s) 782
BsnI GGCC 4 cut(s) 320, 440, 951, 1603
Bso31I GGTCTC 1 cut(s) 815
BsoBI CYCGRG 4 cut(s) 804, 812, 1043, 1235
Bsp1286I GDGCHC 6 cut(s) 1037, 1383, 1437, 1593, 1659, 1725
Bsp1407I TGTACA 1 cut(s) 1067
Bsp143I GATC 9 cut(s) 163, 691, 957, 985, 1123, 1519, 1609, 1680, 1740
BspACI CCGC 2 cut(s) 381, 916
BspANI GGCC 4 cut(s) 320, 440, 951, 1603
BspCNI CTCAG 3 cut(s) 26, 130, 133
BspDI ATCGAT 1 cut(s) 984
BspHI TCATGA 1 cut(s) 669
BspLI GGNNCC 3 cut(s) 321, 770, 771
BspOI GCTAGC 1 cut(s) 408
BspPI GGATC 3 cut(s) 158, 1527, 1617
BspTI CTTAAG 1 cut(s) 1277
BspTNI GGTCTC 1 cut(s) 815
BsrDI GCAATG 1 cut(s) 446
BsrGI TGTACA 1 cut(s) 1067
BsrI ACTGG 2 cut(s) 357, 652
BssECI CCNNGG 2 cut(s) 472, 593
BssMI GATC 9 cut(s) 163, 691, 957, 985, 1123, 1519, 1609, 1680, 1740
Bst2UI CCWGG 2 cut(s) 677, 1167
BstAFI CTTAAG 1 cut(s) 1277
BstAUI TGTACA 1 cut(s) 1067
BstC8I GCNNGC 3 cut(s) 147, 406, 1535
BstDEI CTNAG 7 cut(s) 13, 117, 141, 664, 734, 833, 989
BstEII GGTNACC 1 cut(s) 121
BstF5I GGATG 3 cut(s) 367, 423, 856
BstHHI GCGC 1 cut(s) 1131
BstKTI GATC 9 cut(s) 166, 694, 960, 988, 1126, 1522, 1612, 1683, 1743
BstMAI GTCTC 3 cut(s) 605, 815, 1238
BstMBI GATC 9 cut(s) 163, 691, 957, 985, 1123, 1519, 1609, 1680, 1740
BstNI CCWGG 2 cut(s) 677, 1167
BstPI GGTNACC 1 cut(s) 121
BstSCI CCNGG 4 cut(s) 472, 675, 765, 1165
BstV1I GCAGC 6 cut(s) 82, 100, 1121, 1143, 1305, 1325
BstV2I GAAGAC 1 cut(s) 812
BstX2I RGATCY 3 cut(s) 691, 1519, 1609
BstYI RGATCY 3 cut(s) 691, 1519, 1609
Bsu15I ATCGAT 1 cut(s) 984
BsuRI GGCC 4 cut(s) 320, 440, 951, 1603
BsuTUI ATCGAT 1 cut(s) 984
BtsCI GGATG 3 cut(s) 367, 423, 856
BtsI GCAGTG 1 cut(s) 851
BtsIMutI CAGTG 1 cut(s) 851
Cac8I GCNNGC 3 cut(s) 147, 406, 1535
CaiI CAGNNNCTG 1 cut(s) 614
CciI TCATGA 1 cut(s) 669
CfoI GCGC 1 cut(s) 1131
Cfr13I GGNCC 4 cut(s) 319, 679, 769, 1601
ClaI ATCGAT 1 cut(s) 984
CseI GACGC 1 cut(s) 772
Csp6I GTAC 5 cut(s) 345, 384, 598, 1068, 1197
CviAII CATG 3 cut(s) 376, 670, 780
CviQI GTAC 5 cut(s) 345, 384, 598, 1068, 1197
DdeI CTNAG 7 cut(s) 13, 117, 141, 664, 734, 833, 989
DpnI GATC 9 cut(s) 165, 693, 959, 987, 1125, 1521, 1611, 1682, 1742
DpnII GATC 9 cut(s) 163, 691, 957, 985, 1123, 1519, 1609, 1680, 1740
DriI GACNNNNNGTC 1 cut(s) 775
Eam1105I GACNNNNNGTC 1 cut(s) 775
Ecl136II GAGCTC 4 cut(s) 1435, 1591, 1657, 1723
Eco147I AGGCCT 1 cut(s) 951
Eco24I GRGCYC 6 cut(s) 1037, 1383, 1437, 1593, 1659, 1725
Eco31I GGTCTC 1 cut(s) 815
Eco47I GGWCC 2 cut(s) 679, 769
Eco53kI GAGCTC 4 cut(s) 1435, 1591, 1657, 1723
Eco57I CTGAAG 8 cut(s) 636, 693, 914, 974, 1002, 1469, 1559, 1757
Eco88I CYCGRG 4 cut(s) 804, 812, 1043, 1235
Eco91I GGTNACC 1 cut(s) 121
EcoICRI GAGCTC 4 cut(s) 1435, 1591, 1657, 1723
EcoO109I RGGNCCY 2 cut(s) 319, 769
EcoO65I GGTNACC 1 cut(s) 121
EcoRI GAATTC 2 cut(s) 865, 1309
EcoRII CCWGG 2 cut(s) 675, 1165
EcoT22I ATGCAT 1 cut(s) 729
EcoT38I GRGCYC 6 cut(s) 1037, 1383, 1437, 1593, 1659, 1725
FaeI CATG 3 cut(s) 379, 673, 783
FaiI YATR 9 cut(s) 377, 671, 701, 729, 781, 842, 914, 981, 1248
FalI AAGNNNNNCTT 4 cut(s) 783, 815, 1282, 1314
FaqI GGGAC 1 cut(s) 782
FatI CATG 3 cut(s) 375, 669, 779
Fnu4HI GCNGC 6 cut(s) 96, 114, 1132, 1135, 1294, 1339
FokI GGATG 3 cut(s) 374, 410, 863
FriOI GRGCYC 6 cut(s) 1037, 1383, 1437, 1593, 1659, 1725
Fsp4HI GCNGC 6 cut(s) 96, 114, 1132, 1135, 1294, 1339
FspBI CTAG 1 cut(s) 405
FspI TGCGCA 1 cut(s) 1130
GlaI GCGC 1 cut(s) 1130
GluI GCNGC 6 cut(s) 96, 114, 1132, 1135, 1294, 1339
GsuI CTGGAG 2 cut(s) 669, 1634
HaeIII GGCC 4 cut(s) 320, 440, 951, 1603
HapII CCGG 2 cut(s) 474, 766
HgaI GACGC 1 cut(s) 772
HhaI GCGC 1 cut(s) 1131
Hin1II CATG 3 cut(s) 379, 673, 783
Hin6I GCGC 1 cut(s) 1129
HinP1I GCGC 1 cut(s) 1129
HincII GTYRAC 2 cut(s) 496, 787
HindII GTYRAC 2 cut(s) 496, 787
HindIII AAGCTT 3 cut(s) 896, 1109, 1241
HinfI GANTC 8 cut(s) 480, 995, 1282, 1411, 1477, 1567, 1633, 1699
HpaII CCGG 2 cut(s) 474, 766
HphI GGTGA 1 cut(s) 788
Hpy166II GTNNAC 3 cut(s) 496, 787, 796
Hpy188I TCNGA 3 cut(s) 691, 1026, 1319
Hpy8I GTNNAC 3 cut(s) 496, 787, 796
Hpy99I CGWCG 1 cut(s) 1609
HpyCH4V TGCA 8 cut(s) 727, 844, 890, 1061, 1202, 1262, 1473, 1563
HpyF3I CTNAG 7 cut(s) 13, 117, 141, 664, 734, 833, 989
Hsp92II CATG 3 cut(s) 379, 673, 783
HspAI GCGC 1 cut(s) 1129
KflI GGGWCCC 1 cut(s) 769
Kzo9I GATC 9 cut(s) 163, 691, 957, 985, 1123, 1519, 1609, 1680, 1740
LmnI GCTCC 8 cut(s) 307, 650, 969, 1320, 1440, 1596, 1662, 1728
Lsp1109I GCAGC 6 cut(s) 82, 100, 1121, 1143, 1305, 1325
LweI GCATC 5 cut(s) 148, 714, 1003, 1108, 1152
MaeI CTAG 1 cut(s) 405
MaeIII GTNAC 6 cut(s) 121, 229, 604, 747, 761, 992
MalI GATC 9 cut(s) 165, 693, 959, 987, 1125, 1521, 1611, 1682, 1742
MboI GATC 9 cut(s) 163, 691, 957, 985, 1123, 1519, 1609, 1680, 1740
MboII GAAGA 9 cut(s) 16, 205, 812, 967, 1220, 1277, 1462, 1552, 1750
MfeI CAATTG 3 cut(s) 654, 1402, 1690
MflI RGATCY 3 cut(s) 691, 1519, 1609
MhlI GDGCHC 6 cut(s) 1037, 1383, 1437, 1593, 1659, 1725
MlyI GAGTC 6 cut(s) 989, 1420, 1486, 1576, 1642, 1708
MmeI TCCRAC 1 cut(s) 551
Mph1103I ATGCAT 1 cut(s) 729
MroXI GAANNNNTTC 1 cut(s) 371
MseI TTAA 7 cut(s) 177, 291, 974, 1053, 1278, 1326, 1755
MslI CAYNNNNRTG 1 cut(s) 397
MspA1I CMGCKG 1 cut(s) 1134
MspCI CTTAAG 1 cut(s) 1277
MspI CCGG 2 cut(s) 474, 766
MspR9I CCNGG 4 cut(s) 474, 677, 767, 1167
MunI CAATTG 3 cut(s) 654, 1402, 1690
MvaI CCWGG 2 cut(s) 677, 1167
NciI CCSGG 2 cut(s) 474, 767
NdeII GATC 9 cut(s) 163, 691, 957, 985, 1123, 1519, 1609, 1680, 1740
NheI GCTAGC 1 cut(s) 404
NlaIII CATG 3 cut(s) 379, 673, 783
NlaIV GGNNCC 3 cut(s) 321, 770, 771
NmeAIII GCCGAG 1 cut(s) 618
NmuCI GTSAC 1 cut(s) 992
NsbI TGCGCA 1 cut(s) 1130
NsiI ATGCAT 1 cut(s) 729
PaeR7I CTCGAG 4 cut(s) 804, 812, 1043, 1235
PagI TCATGA 1 cut(s) 669
PceI AGGCCT 1 cut(s) 951
PdmI GAANNNNTTC 1 cut(s) 371
PfeI GAWTC 2 cut(s) 480, 1282
PkrI GCNGC 6 cut(s) 97, 115, 1133, 1136, 1295, 1340
PleI GAGTC 6 cut(s) 989, 1419, 1485, 1575, 1641, 1707
PpsI GAGTC 6 cut(s) 989, 1419, 1485, 1575, 1641, 1707
PpuMI RGGWCCY 1 cut(s) 769
PshBI ATTAAT 2 cut(s) 1053, 1755
Psp124BI GAGCTC 4 cut(s) 1437, 1593, 1659, 1725
Psp5II RGGWCCY 1 cut(s) 769
Psp6I CCWGG 2 cut(s) 675, 1165
PspEI GGTNACC 1 cut(s) 121
PspGI CCWGG 2 cut(s) 675, 1165
PspN4I GGNNCC 3 cut(s) 321, 770, 771
PspPI GGNCC 4 cut(s) 319, 679, 769, 1601
PspPPI RGGWCCY 1 cut(s) 769
PspXI VCTCGAGB 1 cut(s) 804
PstNI CAGNNNCTG 1 cut(s) 614
PsuI RGATCY 3 cut(s) 691, 1519, 1609
PvuII CAGCTG 1 cut(s) 1134
RsaI GTAC 5 cut(s) 346, 385, 599, 1069, 1198
RsaNI GTAC 5 cut(s) 345, 384, 598, 1068, 1197
RseI CAYNNNNRTG 1 cut(s) 397
SacI GAGCTC 4 cut(s) 1437, 1593, 1659, 1725
SaqAI TTAA 7 cut(s) 177, 291, 974, 1053, 1278, 1326, 1755
SatI GCNGC 6 cut(s) 96, 114, 1132, 1135, 1294, 1339
Sau3AI GATC 9 cut(s) 163, 691, 957, 985, 1123, 1519, 1609, 1680, 1740
Sau96I GGNCC 4 cut(s) 319, 679, 769, 1601
ScaI AGTACT 2 cut(s) 346, 1198
SchI GAGTC 6 cut(s) 989, 1420, 1486, 1576, 1642, 1708
ScrFI CCNGG 4 cut(s) 474, 677, 767, 1167
SduI GDGCHC 6 cut(s) 1037, 1383, 1437, 1593, 1659, 1725
SfaNI GCATC 5 cut(s) 148, 714, 1003, 1108, 1152
Sfr274I CTCGAG 4 cut(s) 804, 812, 1043, 1235
SinI GGWCC 2 cut(s) 679, 769
SlaI CTCGAG 4 cut(s) 804, 812, 1043, 1235
SmiMI CAYNNNNRTG 1 cut(s) 397
SseBI AGGCCT 1 cut(s) 951
SsiI CCGC 2 cut(s) 381, 916
SspMI CTAG 1 cut(s) 405
SstI GAGCTC 4 cut(s) 1437, 1593, 1659, 1725
StuI AGGCCT 1 cut(s) 951
StyD4I CCNGG 4 cut(s) 472, 675, 765, 1165
TatI WGTACW 3 cut(s) 344, 1067, 1196
TfiI GAWTC 2 cut(s) 480, 1282
Tru1I TTAA 7 cut(s) 177, 291, 974, 1053, 1278, 1326, 1755
Tru9I TTAA 7 cut(s) 177, 291, 974, 1053, 1278, 1326, 1755
TscAI CASTG 1 cut(s) 851
TseFI GTSAC 1 cut(s) 992
TseI GCWGC 6 cut(s) 95, 113, 1131, 1134, 1293, 1338
Tsp45I GTSAC 1 cut(s) 992
TspDTI ATGAA 4 cut(s) 17, 364, 1209, 1235
TspGWI ACGGA 2 cut(s) 1532, 1622
TspRI CASTG 1 cut(s) 851
Vha464I CTTAAG 1 cut(s) 1277
VpaK11BI GGWCC 2 cut(s) 679, 769
VspI ATTAAT 2 cut(s) 1053, 1755
XapI RAATTY 5 cut(s) 458, 562, 865, 1149, 1309
XhoI CTCGAG 4 cut(s) 804, 812, 1043, 1235
XmnI GAANNNNTTC 1 cut(s) 371
XspI CTAG 1 cut(s) 405
ZrmI AGTACT 2 cut(s) 346, 1198
Zsp2I ATGCAT 1 cut(s) 729
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.