Prupe.8G179400_v2.0.a1

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
18028702 .. 18033650
4949 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G179400.1

Sequence Viewer

Length: 3570 bp
ATGGATTCTTCTTCTTCTTCTTCTGTTCCTTTTTCTGCTCCTCTTCAAGAAAAGTACGATGTGTTTCTTAGTTTCAGAGGTGAAGACACACGCGATACTTTTACCAGCCATCTTCACAAGGATTTACTTCGGAAGAACATTGACACCTACATAGATCGCAGGCTCGAGAGAGGAGATGAAATTGCTCCTGCCCTTCTAAAAGCAATCGAGAGATCGAAAATTGCACTAGTAATTTTCTCAAAAGACTATGCTTCTTCCACATGGTGTTTGAAAGAACTTGTGCATATACTTGGATGCAAGAAAAGCCATGGACAGATTGTTATACCCATTTTTTATCGCATAGATCCATCACATGTACGAAAACAGCGGGGAACTTGTGCACTTGAAGATCGTCCACTTAAGCGCAGTAGGGATGAGGTGGCCAACTGGAGGGCTGCTTTGGAGGAAGCAGCCAATATGTCTGGGTTTCATTATTCCAGCAAAACAGGAAGGACAGAGGCCGATTTTGTTGAGGAAGTTGTCCAAGATGTTTTGACCAAATTGAATCGGGAATCATCAAGTGATTTGAGGGGCCTGTTTGGAATTCAAAGGAAAATTGAGAAAATTGAGTCGTTATTATGCTTGGATTCACCAGGTGTTTGCTGTGTAGGTATTTGGGGCATGGGTGGTATTGGCAAGACTACCCTTGCTGATGCTGTATTTCACAGGCAGTGGCAGTCCTCAAAATTTGAAGCTGCTTGTTTTCTCGCAAATGTCAGGGAGAAATCCGAAAAAACGGATGGACTAAATGAGTTGCGAAATACACTTGTTCGTGAATTATTGAAGGATAAAGATGTAAATATCAACACTCCGTCTATTCCACCTCATATTCAAGATAGGCTCAGGCGTACAAAGGCGTTCATTGTTCTTGATGACGTGAATGCTCGAGAACACCTAGACGTTCTTGTTGGTGATGATGATCGGTTTTGCCAAGGAAGTCGAATCATGGTAACTGCTAGAGATAAAGGCCTGCTTGAGCAAAAAATTGACCATGAAAAGATATACAATGTTGAGGGATTAGGTTCTGATGAAGCTCTTGAGCTCTTTCACTCGCATGCTTTTGGAAATAAGTCCCCAACAACAGATTACACCGAGTTGTCAAGAGAGGTGGTGGATTATATTAAGGGCATTCCATTAGCTCTTAAAGTTATGGGGTCCTCATTCCGTCGTTGCAAGAGCAAACAAGAGTGGGAAGTTCAATGGAAAAAAGTGAAACGAGTTCCAATCGGAGAAATCCAGAAAGTGTTGAGAGTAAGTTACGATGGATTAGATGACAATGAGAAGGAGATATTTCTTGATATAGCATGTTTTCATAAAGGCTGTGAGAGGAATGATGTAGAAAGAATGTTAGATGGTTGTGATTTCTTTGGGGAAGCGGGAATCAATGACCTTATTGATAGGTCTCTCATATCAATTTCAAAAGAAAGATGGTCAAAAGGGCAGATAGAGATGCATGATTTGGTGCAAGAAATGGGTAGGGCAATTGCTCGAGAACAACACAGTAGGTTGTTCATTGCAGAGGATGTCTATCAAGTATTGATAAATGACCAGGGAGATGGACATGTACAAGCAATATCCTTTGACTTGTATGAGATTGAAAAGCTACACTTGGAGTTGGAACATGCAAACTTCAAAAAGATGTATCAACTGAGATTCTTGCATGTCAGTCCTTTTCTTCAATCAATTGTTTCTCTTGATCTTCCCAATTCTCTTAGATTTCTTGCATGGAACGGTTATCCTTTGAAATCTTTGCCATCAAAATTTTCTGCTCAAAACCTTATTGTCCTTGATATGTCATTCAACAAAGTTAGGGGGCAACTTTGGAATGAAGACCAGAGTCCTATGAACTTAAGATGGATGAATCTTAGTTTATCCAGACATCTAACTGAAGTCCCAAATATCTCTCGGAGTCTAAATATTGAGCATATCTATCTGTTTGGTTGTGAAAGATTGGTTGAAATTCCTTCGTATTTTCAATATCTTAGCAAGCTCACTTATCTTCACCTTTCGATGTGCTACAAGCTCAAAAATCTTCCCGAGATGCCATGCAGTCTTGAATTCTTAGATTTGTCTAGGACAGCAATAGAGGAATTGCCTTCATCAGTTTGGTCTAACGAAAAAATATCTCACTTAGATATTAGATATTGTGGACACCTTAAGAGTCTTCCAAGCAACAATTGTAAGCTGAAACTCTCGAATTCTTTTAGTCTAAAGGGCTGCAAATCTCTTTGCGAGATGTGGGAGCTTCCCAGGAATACAACAGTGCTAGAGTTGAGTGGTACAACAATAAAAGAATTGAGGAATACATCAATAGAGTCTGTTGTTGGTCTCACTGCAATTAAACTGATCAATTGCAAAAGCCTTGTGAGTCTTCCAACGAACATTTGGAAGTTGAAATCTCTGGAGAGCCTTGATCTCAGTGGTTGCTCTAAATTTCAACACTTCCCAGAAATCTCGGAGGCTATGAAACATCTGGAGTTTCTAAATTTATCAGGTACAATGGTGAAAGAGGTACCCCCATCAATTGGAAATCTAGTTGCGCTTCGAAAATTAGATCTCGGTGATTGCAAGTACCTTGAGGTTGTCCAAGATTACCTCTTTCGCTTAACCTCATTACAAAAGTTAGATCTGAGTAGCACCAAAATTAAGAGCTTACCCGCAAGCATCAAACAAGCTTCTCAACTGTCTCGGCTGTGCCTCAATGATTGCAATAGCCTTGAATATTTACCAGAGCTCCCCCCATTGCTGCAATGTCTTAAAGCAAATGGTTGCACATCACTGAAGACTGTGTCAAGTTCAAGCACTGCACTCGCACAAGGTTGGGAAAAATATATATTTTCTCAAGGGCATGAGAAACATATATTTTCTGATTGCAGAAGATTGGATGAGAATGCACGAAGCAACATAATGGGTGATGCACACCTCAGAATTATGCGAATGGCAACTGCGTCGTCAAAGTTTAAAGAAGACGAAATTGAGGAATCTTTACGCAAGAGATCTTTTGTTGCCATTAGATGTTGCGGGAATGAAATTCCAAAATGGTTCAGCCATAAAAGTGAGGGATGTTCAATAAAGATTGAGCTTCCTGGTGATTGGTTTAGCACAGATTTCTTGGGTTTCGCTCTATCTATTGTTGTTGCAAAGGACGGATTCTCTCCTCATGCGATTTCCAGCATTGAATGCAAGTACAACTTCAAAACTAGTAATGGTGAAAGCCATGAAGTCAGCCATCATTTGTGTGATCTGCGAACGAATGTTAGACGCAGAGATTCACATGAGGTGTTTGTGTGGTGGTATAGTAATGTCTTTGAAGAAGTTGTGGAGGGGGCTCAAAGCCCCACTGCGTTTTACAAACTTGTTACTGAGGTCAATGTTGACTTCATCGTACGATGTGAATATGAAGACGAAAGCAATTTGCGGTGGGAGAATGCGGTGCAGCTGGACCTGGAGATGGAGGGGGAGGTGAAAAAGTGTGGGATATGTCTCTTGTATGGCAAAGATGCTGAGATGATAATGCAGAGGGCTTTGTAG

Protein Analysis

1190

Amino Acids

135.74

Weight (kDa)

6.38

Isoelectric Point (pI)

48.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 2551
AccB1I GGYRCC 1 cut(s) 2551
AccB7I CCANNNNNTGG 1 cut(s) 2564
AccII CGCG 1 cut(s) 93
AciI CCGC 6 cut(s) 367, 1415, 2697, 3060, 3457, 3470
AclWI GGATC 1 cut(s) 338
AcoI YGGCCR 1 cut(s) 420
AcsI RAATTY 9 cut(s) 582, 725, 1799, 1998, 2096, 2236, 2471, 2524, 3069
AcuI CTGAAG 2 cut(s) 1947, 2840
AdeI CACNNNGTG 2 cut(s) 264, 635
AfiI CCNNNNNNNGG 3 cut(s) 429, 2564, 3490
AflII CTTAAG 3 cut(s) 398, 1888, 2195
AflIII ACRYGT 2 cut(s) 352, 1600
AhlI ACTAGT 2 cut(s) 226, 3239
AjiI CACGTC 1 cut(s) 916
AjnI CCWGG 5 cut(s) 631, 1587, 2288, 3124, 3483
Alw21I GWGCWC 3 cut(s) 382, 1083, 2775
Alw26I GTCTC 4 cut(s) 1446, 2372, 2730, 3527
Alw44I GTGCAC 1 cut(s) 378
AlwI GGATC 1 cut(s) 338
Ama87I CYCGRG 4 cut(s) 164, 924, 1527, 2075
AoxI GGCC 4 cut(s) 420, 498, 571, 1006
ApaLI GTGCAC 1 cut(s) 378
ApeKI GCWGC 6 cut(s) 434, 449, 734, 2256, 2785, 3475
ApoI RAATTY 9 cut(s) 582, 725, 1799, 1998, 2096, 2236, 2471, 2524, 3069
Asp718I GGTACC 1 cut(s) 2551
AspLEI GCGC 2 cut(s) 405, 2581
AspS9I GGNCC 3 cut(s) 571, 1194, 3481
AsuII TTCGAA 1 cut(s) 2584
AvaI CYCGRG 4 cut(s) 164, 924, 1527, 2075
AvaII GGWCC 2 cut(s) 1194, 3481
BaeGI GKGCMC 1 cut(s) 382
BaeI ACNNNNGTAYC 2 cut(s) 2526, 2559
BalI TGGCCA 1 cut(s) 422
BanI GGYRCC 1 cut(s) 2551
BanII GRGCYC 3 cut(s) 1083, 2775, 3370
BbsI GAAGAC 7 cut(s) 90, 1875, 2195, 2402, 2828, 3012, 3447
Bbv12I GWGCWC 3 cut(s) 382, 1083, 2775
BbvI GCAGC 6 cut(s) 421, 461, 721, 2243, 2772, 3487
BcgI CGANNNNNNTGC 4 cut(s) 2830, 2864, 2970, 3004
BciT130I CCWGG 5 cut(s) 633, 1589, 2290, 3126, 3485
BclI TGATCA 1 cut(s) 2385
BcoDI GTCTC 4 cut(s) 1446, 2372, 2730, 3527
BcuI ACTAGT 2 cut(s) 226, 3239
BfaI CTAG 7 cut(s) 227, 935, 996, 2112, 2306, 2573, 3240
BfrI CTTAAG 3 cut(s) 398, 1888, 2195
BglII AGATCT 3 cut(s) 2593, 2665, 3035
BisI GCNGC 6 cut(s) 435, 450, 735, 2257, 2786, 3476
BlsI GCNGC 6 cut(s) 436, 451, 736, 2258, 2787, 3477
Bme1390I CCNGG 5 cut(s) 633, 1589, 2290, 3126, 3485
Bme18I GGWCC 2 cut(s) 1194, 3481
BmeT110I CYCGRG 4 cut(s) 164, 924, 1527, 2075
BmgBI CACGTC 1 cut(s) 916
BmgT120I GGNCC 3 cut(s) 571, 1194, 3481
BmiI GGNNCC 3 cut(s) 572, 1195, 2553
BmrFI CCNGG 5 cut(s) 633, 1589, 2290, 3126, 3485
BmsI GCATC 7 cut(s) 284, 682, 1479, 2070, 2712, 2944, 3529
BoxI GACNNNNGTC 1 cut(s) 1875
BpiI GAAGAC 7 cut(s) 90, 1875, 2195, 2402, 2828, 3012, 3447
BpmI CTGGAG 4 cut(s) 448, 2462, 2534, 3506
Bpu10I CCTNAGC 1 cut(s) 881
Bpu14I TTCGAA 1 cut(s) 2584
BpuEI CTTGAG 4 cut(s) 1034, 1097, 2636, 2865
BsaBI GATNNNNATC 2 cut(s) 957, 1566
BsaI GGTCTC 2 cut(s) 1446, 2372
BsaJI CCNNGG 4 cut(s) 307, 970, 1588, 2288
BsaXI ACNNNNNCTCC 2 cut(s) 2757, 2787
Bsc4I CCNNNNNNNGG 3 cut(s) 429, 2564, 3490
Bse1I ACTGG 1 cut(s) 431
Bse3DI GCAATG 3 cut(s) 1551, 2780, 2795
Bse8I GATNNNNATC 2 cut(s) 957, 1566
BseBI CCWGG 5 cut(s) 633, 1589, 2290, 3126, 3485
BseDI CCNNGG 4 cut(s) 307, 970, 1588, 2288
BseGI GGATG 7 cut(s) 299, 418, 784, 1567, 1902, 2929, 3107
BseJI GATNNNNATC 2 cut(s) 957, 1566
BseLI CCNNNNNNNGG 3 cut(s) 429, 2564, 3490
BseMI GCAATG 3 cut(s) 1551, 2780, 2795
BseMII CTCAG 7 cut(s) 895, 1679, 2470, 2660, 2977, 3393, 3534
BseNI ACTGG 1 cut(s) 431
BseRI GAGGAG 3 cut(s) 30, 186, 3186
BseSI GKGCMC 1 cut(s) 382
BseXI GCAGC 6 cut(s) 421, 461, 721, 2243, 2772, 3487
BsgI GTGCAG 2 cut(s) 2829, 3494
Bsh1236I CGCG 1 cut(s) 93
BshFI GGCC 4 cut(s) 422, 500, 573, 1008
BshNI GGYRCC 1 cut(s) 2551
BsiHKAI GWGCWC 3 cut(s) 382, 1083, 2775
BsiHKCI CYCGRG 4 cut(s) 164, 924, 1527, 2075
BsiWI CGTACG 1 cut(s) 3424
BslFI GGGAC 2 cut(s) 1096, 1916
BslI CCNNNNNNNGG 3 cut(s) 429, 2564, 3490
BsmAI GTCTC 4 cut(s) 1446, 2372, 2730, 3527
BsmFI GGGAC 2 cut(s) 1096, 1916
BsmI GAATGC 5 cut(s) 925, 1167, 2935, 3224, 3472
BsnI GGCC 4 cut(s) 422, 500, 573, 1008
Bso31I GGTCTC 2 cut(s) 1446, 2372
BsoBI CYCGRG 4 cut(s) 164, 924, 1527, 2075
Bsp119I TTCGAA 1 cut(s) 2584
Bsp1286I GDGCHC 4 cut(s) 382, 1083, 2775, 3370
Bsp1407I TGTACA 1 cut(s) 1603
Bsp19I CCATGG 1 cut(s) 307
BspACI CCGC 6 cut(s) 367, 1415, 2697, 3060, 3457, 3470
BspANI GGCC 4 cut(s) 422, 500, 573, 1008
BspCNI CTCAG 7 cut(s) 894, 1680, 2469, 2661, 2976, 3394, 3535
BspFNI CGCG 1 cut(s) 93
BspLI GGNNCC 3 cut(s) 572, 1195, 2553
BspPI GGATC 1 cut(s) 338
BspT104I TTCGAA 1 cut(s) 2584
BspT107I GGYRCC 1 cut(s) 2551
BspTI CTTAAG 3 cut(s) 398, 1888, 2195
BspTNI GGTCTC 2 cut(s) 1446, 2372
BsrDI GCAATG 3 cut(s) 1551, 2780, 2795
BsrGI TGTACA 1 cut(s) 1603
BsrI ACTGG 1 cut(s) 431
BssECI CCNNGG 4 cut(s) 307, 970, 1588, 2288
BssT1I CCWWGG 2 cut(s) 307, 970
Bst2UI CCWGG 5 cut(s) 633, 1589, 2290, 3126, 3485
Bst4CI ACNGT 5 cut(s) 1541, 1772, 2302, 2724, 2827
Bst6I CTCTTC 1 cut(s) 48
BstAFI CTTAAG 3 cut(s) 398, 1888, 2195
BstAPI GCANNNNNTGC 1 cut(s) 3219
BstAUI TGTACA 1 cut(s) 1603
BstBI TTCGAA 1 cut(s) 2584
BstC8I GCNNGC 5 cut(s) 161, 1010, 1095, 2027, 2701
BstDSI CCRYGG 1 cut(s) 307
BstF5I GGATG 7 cut(s) 299, 418, 784, 1567, 1902, 2929, 3107
BstFNI CGCG 1 cut(s) 93
BstHHI GCGC 2 cut(s) 405, 2581
BstMAI GTCTC 4 cut(s) 1446, 2372, 2730, 3527
BstMWI GCNNNNNNNGC 2 cut(s) 303, 3219
BstNI CCWGG 5 cut(s) 633, 1589, 2290, 3126, 3485
BstNSI RCATGY 6 cut(s) 356, 1097, 1347, 1604, 1664, 1703
BstPAI GACNNNNGTC 1 cut(s) 1875
BstSCI CCNGG 5 cut(s) 631, 1587, 2288, 3124, 3483
BstSLI GKGCMC 1 cut(s) 382
BstUI CGCG 1 cut(s) 93
BstV1I GCAGC 6 cut(s) 421, 461, 721, 2243, 2772, 3487
BstV2I GAAGAC 7 cut(s) 90, 1875, 2195, 2402, 2828, 3012, 3447
BstX2I RGATCY 4 cut(s) 343, 2593, 2665, 3035
BstXI CCANNNNNNTGG 1 cut(s) 1595
BstYI RGATCY 4 cut(s) 343, 2593, 2665, 3035
BsuRI GGCC 4 cut(s) 422, 500, 573, 1008
BtgI CCRYGG 1 cut(s) 307
BtrI CACGTC 1 cut(s) 916
BtsCI GGATG 7 cut(s) 299, 418, 784, 1567, 1902, 2929, 3107
BtsI GCAGTG 4 cut(s) 716, 2370, 2841, 3378
BtsIMutI CAGTG 7 cut(s) 716, 2307, 2370, 2464, 2816, 2841, 3378
Cac8I GCNNGC 5 cut(s) 161, 1010, 1095, 2027, 2701
CfoI GCGC 2 cut(s) 405, 2581
Cfr13I GGNCC 3 cut(s) 571, 1194, 3481
CseI GACGC 2 cut(s) 2976, 3309
CsiI ACCWGGT 1 cut(s) 631
CspCI CAANNNNNGTGG 2 cut(s) 1128, 1163
DraI TTTAAA 1 cut(s) 3001
DraIII CACNNNGTG 2 cut(s) 264, 635
EaeI YGGCCR 1 cut(s) 420
Eam1104I CTCTTC 1 cut(s) 48
EarI CTCTTC 1 cut(s) 48
Ecl136II GAGCTC 2 cut(s) 1081, 2773
Eco130I CCWWGG 2 cut(s) 307, 970
Eco147I AGGCCT 1 cut(s) 1008
Eco24I GRGCYC 3 cut(s) 1083, 2775, 3370
Eco31I GGTCTC 2 cut(s) 1446, 2372
Eco47I GGWCC 2 cut(s) 1194, 3481
Eco53kI GAGCTC 2 cut(s) 1081, 2773
Eco57I CTGAAG 2 cut(s) 1947, 2840
Eco88I CYCGRG 4 cut(s) 164, 924, 1527, 2075
EcoICRI GAGCTC 2 cut(s) 1081, 2773
EcoO109I RGGNCCY 2 cut(s) 571, 1194
EcoRI GAATTC 3 cut(s) 582, 2096, 2236
EcoRII CCWGG 5 cut(s) 631, 1587, 2288, 3124, 3483
EcoT14I CCWWGG 2 cut(s) 307, 970
EcoT22I ATGCAT 1 cut(s) 1494
EcoT38I GRGCYC 3 cut(s) 1083, 2775, 3370
ErhI CCWWGG 2 cut(s) 307, 970
FalI AAGNNNNNCTT 6 cut(s) 996, 1028, 1631, 1663, 3215, 3247
FaqI GGGAC 2 cut(s) 1096, 1916
FauI CCCGC 4 cut(s) 360, 1408, 2704, 3053
FbaI TGATCA 1 cut(s) 2385
Fnu4HI GCNGC 6 cut(s) 435, 450, 735, 2257, 2786, 3476
FokI GGATG 7 cut(s) 306, 425, 791, 1574, 1909, 2936, 3114
FriOI GRGCYC 3 cut(s) 1083, 2775, 3370
Fsp4HI GCNGC 6 cut(s) 435, 450, 735, 2257, 2786, 3476
FspBI CTAG 7 cut(s) 227, 935, 996, 2112, 2306, 2573, 3240
GlaI GCGC 2 cut(s) 404, 2580
GluI GCNGC 6 cut(s) 435, 450, 735, 2257, 2786, 3476
GsuI CTGGAG 4 cut(s) 448, 2462, 2534, 3506
HaeIII GGCC 4 cut(s) 422, 500, 573, 1008
HgaI GACGC 2 cut(s) 2976, 3309
HhaI GCGC 2 cut(s) 405, 2581
Hin6I GCGC 2 cut(s) 403, 2579
HinP1I GCGC 2 cut(s) 403, 2579
HincII GTYRAC 1 cut(s) 3415
HindII GTYRAC 1 cut(s) 3415
HindIII AAGCTT 1 cut(s) 2712
Hpy166II GTNNAC 4 cut(s) 380, 395, 2189, 3415
Hpy8I GTNNAC 4 cut(s) 380, 395, 2189, 3415
Hpy99I CGWCG 2 cut(s) 1209, 2992
HpyAV CCTTC 6 cut(s) 203, 483, 817, 1315, 2013, 2145
HpyCH4III ACNGT 5 cut(s) 1541, 1772, 2302, 2724, 2827
HpyCH4IV ACGT 2 cut(s) 915, 939
HpyF10VI GCNNNNNNNGC 2 cut(s) 303, 3219
HpySE526I ACGT 2 cut(s) 915, 939
HspAI GCGC 2 cut(s) 403, 2579
KpnI GGTACC 1 cut(s) 2555
Ksp22I TGATCA 1 cut(s) 2385
LmnI GCTCC 4 cut(s) 43, 190, 2281, 2778
Lsp1109I GCAGC 6 cut(s) 421, 461, 721, 2243, 2772, 3487
LweI GCATC 7 cut(s) 284, 682, 1479, 2070, 2712, 2944, 3529
MabI ACCWGGT 1 cut(s) 631
MaeI CTAG 7 cut(s) 227, 935, 996, 2112, 2306, 2573, 3240
MaeII ACGT 2 cut(s) 915, 939
MaeIII GTNAC 3 cut(s) 988, 1295, 3397
MfeI CAATTG 5 cut(s) 1521, 1722, 2215, 2389, 2562
MflI RGATCY 4 cut(s) 343, 2593, 2665, 3035
MhlI GDGCHC 4 cut(s) 382, 1083, 2775, 3370
MlsI TGGCCA 1 cut(s) 422
MluNI TGGCCA 1 cut(s) 422
MlyI GAGTC 6 cut(s) 617, 1885, 1957, 2209, 2363, 2416
MmeI TCCRAC 2 cut(s) 1635, 2438
Mox20I TGGCCA 1 cut(s) 422
Mph1103I ATGCAT 1 cut(s) 1494
MscI TGGCCA 1 cut(s) 422
MslI CAYNNNNRTG 3 cut(s) 1092, 3093, 3276
Msp20I TGGCCA 1 cut(s) 422
MspA1I CMGCKG 2 cut(s) 367, 3478
MspCI CTTAAG 3 cut(s) 398, 1888, 2195
MspR9I CCNGG 5 cut(s) 633, 1589, 2290, 3126, 3485
MunI CAATTG 5 cut(s) 1521, 1722, 2215, 2389, 2562
Mva1269I GAATGC 5 cut(s) 925, 1167, 2935, 3224, 3472
MvaI CCWGG 5 cut(s) 633, 1589, 2290, 3126, 3485
MvnI CGCG 1 cut(s) 93
MwoI GCNNNNNNNGC 2 cut(s) 303, 3219
NcoI CCATGG 1 cut(s) 307
NlaIV GGNNCC 3 cut(s) 572, 1195, 2553
NmeAIII GCCGAG 1 cut(s) 2707
NsiI ATGCAT 1 cut(s) 1494
NspI RCATGY 6 cut(s) 356, 1097, 1347, 1604, 1664, 1703
NspV TTCGAA 1 cut(s) 2584
PaeI GCATGC 1 cut(s) 1097
PaeR7I CTCGAG 3 cut(s) 164, 924, 1527
PceI AGGCCT 1 cut(s) 1008
PciI ACATGT 2 cut(s) 352, 1600
PctI GAATGC 5 cut(s) 925, 1167, 2935, 3224, 3472
Pfl23II CGTACG 1 cut(s) 3424
PflFI GACNNNGTC 1 cut(s) 2827
PflMI CCANNNNNTGG 1 cut(s) 2564
PkrI GCNGC 6 cut(s) 436, 451, 736, 2258, 2787, 3477
PleI GAGTC 6 cut(s) 616, 1884, 1956, 2208, 2362, 2415
PpsI GAGTC 6 cut(s) 616, 1884, 1956, 2208, 2362, 2415
PpuMI RGGWCCY 1 cut(s) 1194
PscI ACATGT 2 cut(s) 352, 1600
PshAI GACNNNNGTC 1 cut(s) 1875
Psp124BI GAGCTC 2 cut(s) 1083, 2775
Psp5II RGGWCCY 1 cut(s) 1194
Psp6I CCWGG 5 cut(s) 631, 1587, 2288, 3124, 3483
PspGI CCWGG 5 cut(s) 631, 1587, 2288, 3124, 3483
PspLI CGTACG 1 cut(s) 3424
PspN4I GGNNCC 3 cut(s) 572, 1195, 2553
PspPI GGNCC 3 cut(s) 571, 1194, 3481
PspPPI RGGWCCY 1 cut(s) 1194
PsuI RGATCY 4 cut(s) 343, 2593, 2665, 3035
PsyI GACNNNGTC 1 cut(s) 2827
PvuII CAGCTG 1 cut(s) 3478
RseI CAYNNNNRTG 3 cut(s) 1092, 3093, 3276
SacI GAGCTC 2 cut(s) 1083, 2775
SatI GCNGC 6 cut(s) 435, 450, 735, 2257, 2786, 3476
Sau96I GGNCC 3 cut(s) 571, 1194, 3481
SchI GAGTC 6 cut(s) 617, 1885, 1957, 2209, 2363, 2416
ScrFI CCNGG 5 cut(s) 633, 1589, 2290, 3126, 3485
SduI GDGCHC 4 cut(s) 382, 1083, 2775, 3370
SexAI ACCWGGT 1 cut(s) 631
SfaNI GCATC 7 cut(s) 284, 682, 1479, 2070, 2712, 2944, 3529
Sfr274I CTCGAG 3 cut(s) 164, 924, 1527
SfuI TTCGAA 1 cut(s) 2584
SinI GGWCC 2 cut(s) 1194, 3481
SlaI CTCGAG 3 cut(s) 164, 924, 1527
SmiMI CAYNNNNRTG 3 cut(s) 1092, 3093, 3276
SpeI ACTAGT 2 cut(s) 226, 3239
SphI GCATGC 1 cut(s) 1097
SseBI AGGCCT 1 cut(s) 1008
SsiI CCGC 6 cut(s) 367, 1415, 2697, 3060, 3457, 3470
SspI AATATT 2 cut(s) 1957, 2762
SspMI CTAG 7 cut(s) 227, 935, 996, 2112, 2306, 2573, 3240
SstI GAGCTC 2 cut(s) 1083, 2775
StuI AGGCCT 1 cut(s) 1008
StyD4I CCNGG 5 cut(s) 631, 1587, 2288, 3124, 3483
StyI CCWWGG 2 cut(s) 307, 970
TaaI ACNGT 5 cut(s) 1541, 1772, 2302, 2724, 2827
TaiI ACGT 2 cut(s) 918, 942
TaqI TCGA 9 cut(s) 165, 207, 215, 925, 979, 1528, 2048, 2234, 2584
TatI WGTACW 2 cut(s) 1603, 3225
TscAI CASTG 7 cut(s) 716, 2307, 2377, 2464, 2823, 2848, 3385
TseI GCWGC 6 cut(s) 434, 449, 734, 2256, 2785, 3475
TspGWI ACGGA 4 cut(s) 791, 840, 1193, 3201
TspRI CASTG 7 cut(s) 716, 2307, 2377, 2464, 2823, 2848, 3385
Tth111I GACNNNGTC 1 cut(s) 2827
Van91I CCANNNNNTGG 1 cut(s) 2564
Vha464I CTTAAG 3 cut(s) 398, 1888, 2195
VneI GTGCAC 1 cut(s) 378
VpaK11BI GGWCC 2 cut(s) 1194, 3481
XapI RAATTY 9 cut(s) 582, 725, 1799, 1998, 2096, 2236, 2471, 2524, 3069
XceI RCATGY 6 cut(s) 356, 1097, 1347, 1604, 1664, 1703
XcmI CCANNNNNNNNNTGG 1 cut(s) 2421
XhoI CTCGAG 3 cut(s) 164, 924, 1527
XspI CTAG 7 cut(s) 227, 935, 996, 2112, 2306, 2573, 3240
Zsp2I ATGCAT 1 cut(s) 1494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.