MD10G1136400.v1.1

RESISTANCE protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Forward (+)
22065484 .. 22069257
3774 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1136400.v1.1.491

Sequence Viewer

Length: 3228 bp
ATGGGTGGTATTGGCAAGACTACCCTTGCTGAAGCTGTTTTTCACCGACTCACTTCTAAATTTGAGGCTTCATGTTTTCTTCCAAATGTGAGGGAGGAGTCAGAAAGACATGGACTAAAGCACTTGCGGAATGTACTTCTTCGTGAGATACTAAACGAAAAAGATCTAAATATTGACACTCCATCTATAGGACGAAGTTTTGTTCGAGAAAGGCTCAGCCGTACAAAGGTACTCATTGTTCTTGACGATGTGAATGATTCAAGCCAATTGGAACTTCTAGTTGGTGATGATATTCAGTTTGGTTGCGGAAGTCGAATCATTATAACAACTAGAGACAGACGACTACTTAAGAAAATGGCTGATGCTGACAAGATATTCAAGGTTGAGGGATTAAGGTGTGATGAAGCTCTTCAGCTCTTTCATTTGCACGCTTTCAAAAATGACTCTATGGGGTCATATTATACAGAGTTGTCAAGAATGGTGGTCGATTATGCCGGAGGCATACCACTAGCTCTTATAATTTTGGGCTCCTTATTCCTTCACTGTGAGAGCAAACAAGACTGGGAAGATCAATTGAACGAGTTGAAAAAGTTTCCCAACCGTAAAATTCAGAATGTGTTGAGACTAAGTTACGATGGATTAGAAAAAAATGCAAAGGAGATATTTCTTGATATAGCATGTTTTTACAAAGGGATGGATATACGTCTTGCAAAAGAAATGTTAGATATTCGTGGTTTTTTTGCAGGAGGTATTAAAGTTCTCGTTGATAAGTCTCTCATTTCAATTTCAGAGATGAACTGCCTAGAAATGCATGATTTACTACAAGAAATGGGACTGGAAATGGTTCGTGAGCAGTGTATTGAGGAGCCCGGAAAACGCAGTAGGTTATTCATTAAGGAGGATGTCTCTCATGTGTTGAAGAATAATACAGGAACTGCAACAGTTGAATGCATATTCTTTAATATGTCTAAGATTAAAGAGCTACACTTGAATCCCGCAGCCTTCAAAAAGATGTATAATCTGAGAGTGCTGGAGATCTATAATTCTTCTAGCTTGGACAATAAGTGCAGCAAATTGTACGTTCCTGAAGGTCTTCAGTCTCTTCCCGATACGCTTAGTTATCTTCACTGGGAGGGATACCCTTTGAAATATTTTCCATCAAAATTTTCTCCTCAAAATCTCGTTAACATTCAAATGGCCCACAGTCAAGTCGAACAGCTTTGGAGTAAAGGCCAGAAACTTGCGAATTTAAAAGTGATCGATTTTAGCTTCTCCAAACACCTGACTGAAATTCCAGATCTCTCCCTGAGTCGCAAAATTGAACATATAAATCTTGGTTGCTGTAAAAGTTTGGTTGAAATTCCTTCGTATTTTCAATATCTTGACAAACTTAGTTTTCTTGGGCTGAGAGGATGCTCGAATCTCAAATATCTTCCGGAGTTGCCAATCAGCATTAAAACCTTATATTTGTCAGAGACTGCAATAAAGGAATTGCCTTCATCAGTTTGGTCAAACGAAAATCTTTCTCACCTGGATATCGAATTTTGTAAAGATCTTGAGAATCTTCCAAGCTGCAGTTGCAAGCTGAAATTCCCCTTTCGGTTTAGTATAGAGGGCTGCTCATCACTTCGCAAGGTTTGGGAACTTCCTAGGGATATACAAGAGTTATTTTTGAATGGGACAGCAATAGAAACATTGCCTTCATCAATTGAGTGTCTCTTTGGTCTTACTGAAATTGGACTGAAAGATTGCAAAAGTCTCGTCAGTCTCCCTACGAGCATATGTAAGTTGAAATGTCTTGAGGGACTTGATCTCACTGGTTGCTCTAAATTTGAATGCTTCCCAGAAATTTTGGAGCCTATGGAACATCTGAAGTTTCTTTCATTAAAGGGAACAGCAGTTAAAGAGCTACCTTCATCAATCGAATTTCTCTCTCATCTCCTAATCATTGACTTGAAAAATTGCCAAAGATTCATGAGTCTCCCGAAGAGCATTTGTAAGTTGAAATCCCTTTGGAAGCTTAACCTGAAAGAGTGCTGTAGATTCAACTGTTTCCCTGAAATCTTGGAGCCTATGGAACGTCTAGAGTTTCTTAGTTTAAGAAGGACAGCAGTTAAAGAGCTGCCCTCATCAATCGAAAATCTAATTGGGCTTGAAACATTAGATCTCCGTCTGTGCAAGAAGCTTGAGTTTGTCCCAAGCAGCATCTACAATTTAAACTGTCTTAGAACTCTCAGTTTTGATGGCTGTTCTAAACTTAAAAAATTGCCTTCATCCTCATTTGGCTTTAACGATTTGGAAGAAGCAACTCTCAGTTATTCCGGTATATTAGAAATCCCTGATCGCCTCGTTTGCTTAACCTCATTACGAGGATTAGATCTAAGAGGAACCATGGTTAAGTGGATACCAGCAAGCATCAAACAAGCTTCTCGGCTGTCTTGCCTGTTGTTAAATAATTGCAAAAGCCTTCAATCTTTACCCGAGCTCCCAGGGGTACGTTGGCTGGAAGCACATGGTTGCACTTCTCTGGGGAAAGTGTCAAGTTTAAGGACTCAACTTGTACAAGGTCGTGATGATTATGAACATGGAGTTTATGGTAGGATCCCCGAGAAACTTATATTTTCTGGTTGCTTGAAATTGGATGAGAATGCGCGGAACAGCATAATGGACGACGCACATCTTCGAATTTTGCGAATGGCGGCGTCACACAATGTGGAATCGTTGGATGGAAATTCTTTAGTTACCATTGTATGTCCAGGAAATGAAATTCCTAATTGGTTCGGAGCTCAAAATGAGGGATCTTCGATAAATATCAGTCTTCCTCCAAATTGTTTTGGGTCAGACTTCTTGGGCTTCGTTTTCTCTCTTCTTGTTGATTTTGACAACTATAATGTTGAACAAGGATTGGAGTTCGGATGTAAATCCACACTCAAAGGGAATAGTGGTAAAAGCCATGAATTTAGCTGTCGTTTGTGTGATCGACTGTGGGGTGAAACCCAAGGTGAAGAAAGCAACGGCTACAATTTCAATTCGGACCACGTGTTTGTGTGGTATAATACATTTGACCTTGTGGGGGGAGCACAATGCTCTACTGCTCTTCACAATGGTGTCACTGAGGCATCTGTTGAGTTCTACCCCAAAGATCATCATGACAGACCACTTAACTCATACACAGTGAAGGTAAAAAGGTGTGGTGTCCGCCTGTTGTATGCTGAAGATACTAAGTAA

Protein Analysis

1076

Amino Acids

121.77

Weight (kDa)

6.45

Isoelectric Point (pI)

44.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 1 - 148 6e-18 NB-ARC domain
WHD_ROQ1 PF23282 215 - 285 1.7e-18 Disease resistance protein Roq1-like, winged-helix domain
LRR_13 PF23286 461 - 546 9.7e-06 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_13 PF23286 597 - 668 2e-07 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 603 - 699 2.4e-13 Leucine-rich repeat region
LRR_13 PF23286 668 - 852 6.8e-17 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 694 - 753 3.3e-09 Leucine-rich repeat region
LRR_14 PF23598 771 - 851 6.5e-06 Leucine-rich repeat region
C-JID PF20160 918 - 1074 2.2e-15 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 323, 518
AccII CGCG 1 cut(s) 2653
AccIII TCCGGA 1 cut(s) 1435
AciI CCGC 6 cut(s) 127, 306, 996, 2653, 2699, 3199
AclWI GGATC 3 cut(s) 2596, 2609, 2806
AcuI CTGAAG 5 cut(s) 51, 395, 1079, 1107, 1892
AcvI CACGTG 1 cut(s) 3040
AcyI GRCGYC 1 cut(s) 2702
AdeI CACNNNGTG 1 cut(s) 2713
AfaI GTAC 6 cut(s) 135, 223, 231, 1079, 2496, 2562
AfiI CCNNNNNNNGG 3 cut(s) 188, 226, 3073
AflII CTTAAG 1 cut(s) 347
AflIII ACRYGT 1 cut(s) 3039
AjnI CCWGG 3 cut(s) 1530, 2488, 2755
AjuI GAANNNNNNNTTGG 6 cut(s) 258, 264, 290, 296, 2130, 2162
AleI CACNNNNGTG 1 cut(s) 3105
Alw21I GWGCWC 3 cut(s) 2487, 2788, 3082
AlwI GGATC 3 cut(s) 2596, 2609, 2806
AlwNI CAGNNNCTG 2 cut(s) 935, 1478
Ama87I CYCGRG 2 cut(s) 2480, 2606
Aor13HI TCCGGA 1 cut(s) 1435
AoxI GGCC 2 cut(s) 1197, 1231
ApeKI GCWGC 6 cut(s) 998, 1068, 1572, 1617, 2122, 2202
ArsI GACNNNNNNTTYG 4 cut(s) 1746, 1778, 3026, 3058
Asp700I GAANNNNTTC 3 cut(s) 408, 843, 1092
AspA2I CCTAGG 1 cut(s) 1649
AspLEI GCGC 1 cut(s) 2653
AspS9I GGNCC 2 cut(s) 1198, 3034
AsuC2I CCSGG 1 cut(s) 870
AsuHPI GGTGA 5 cut(s) 35, 296, 1520, 3002, 3014
AsuII TTCGAA 1 cut(s) 2683
AvaI CYCGRG 2 cut(s) 2480, 2606
AvaII GGWCC 1 cut(s) 3034
AvrII CCTAGG 1 cut(s) 1649
BamHI GGATCC 1 cut(s) 2601
BanII GRGCYC 4 cut(s) 530, 870, 2487, 2788
BbrPI CACGTG 1 cut(s) 3040
BbsI GAAGAC 2 cut(s) 1085, 2810
Bbv12I GWGCWC 3 cut(s) 2487, 2788, 3082
BbvI GCAGC 6 cut(s) 1010, 1080, 1559, 1604, 2109, 2214
BccI CCATC 6 cut(s) 190, 629, 688, 1165, 2237, 2720
BceAI ACGGC 2 cut(s) 204, 3031
BcgI CGANNNNNNTGC 2 cut(s) 1741, 1775
BciT130I CCWGG 3 cut(s) 1532, 2490, 2757
BciVI GTATCC 2 cut(s) 1130, 2397
BcnI CCSGG 1 cut(s) 870
BfaI CTAG 7 cut(s) 278, 330, 509, 803, 1050, 1650, 2084
BfmI CTRYAG 3 cut(s) 186, 1573, 2038
BfrI CTTAAG 1 cut(s) 347
BfuI GTATCC 2 cut(s) 1130, 2397
BglII AGATCT 6 cut(s) 163, 1035, 1297, 1552, 2164, 2377
BisI GCNGC 7 cut(s) 999, 1069, 1573, 1618, 2123, 2203, 2700
BlnI CCTAGG 1 cut(s) 1649
BlpI GCTNAGC 1 cut(s) 215
BlsI GCNGC 7 cut(s) 1000, 1070, 1574, 1619, 2124, 2204, 2701
Bme1390I CCNGG 4 cut(s) 870, 1532, 2490, 2757
Bme18I GGWCC 1 cut(s) 3034
BmeT110I CYCGRG 2 cut(s) 2480, 2606
BmgT120I GGNCC 2 cut(s) 1198, 3034
BmiI GGNNCC 6 cut(s) 529, 867, 1857, 2070, 2389, 2603
BmrFI CCNGG 4 cut(s) 870, 1532, 2490, 2757
BmrI ACTGGG 2 cut(s) 571, 1138
BmsI GCATC 5 cut(s) 352, 1403, 2214, 2424, 3128
BmuI ACTGGG 2 cut(s) 571, 1138
BpiI GAAGAC 2 cut(s) 1085, 2810
BplI GAGNNNNNCTC 8 cut(s) 198, 230, 890, 922, 1604, 1636, 2111, 2143
BpmI CTGGAG 1 cut(s) 1052
Bpu1102I GCTNAGC 1 cut(s) 215
Bpu14I TTCGAA 1 cut(s) 2683
BpuEI CTTGAG 3 cut(s) 1577, 1820, 2207
BpuMI CCSGG 1 cut(s) 870
Bsa29I ATCGAT 1 cut(s) 1260
BsaAI YACGTR 1 cut(s) 3040
BsaBI GATNNNNATC 2 cut(s) 2810, 2920
BsaHI GRCGYC 1 cut(s) 2702
BsaJI CCNNGG 5 cut(s) 1649, 2391, 2488, 2489, 2998
BsaWI WCCGGW 2 cut(s) 1435, 2321
BsaXI ACNNNNNCTCC 2 cut(s) 2469, 2499
Bsc4I CCNNNNNNNGG 3 cut(s) 188, 226, 3073
Bse1I ACTGG 4 cut(s) 566, 840, 1133, 1822
Bse3DI GCAATG 1 cut(s) 1694
Bse8I GATNNNNATC 2 cut(s) 2810, 2920
BseAI TCCGGA 1 cut(s) 1435
BseBI CCWGG 3 cut(s) 1532, 2490, 2757
BseCI ATCGAT 1 cut(s) 1260
BseDI CCNNGG 5 cut(s) 1649, 2391, 2488, 2489, 2998
BseGI GGATG 7 cut(s) 699, 907, 1418, 2273, 2647, 2731, 2921
BseJI GATNNNNATC 2 cut(s) 2810, 2920
BseLI CCNNNNNNNGG 3 cut(s) 188, 226, 3073
BseMI GCAATG 1 cut(s) 1694
BseMII CTCAG 7 cut(s) 229, 1013, 1298, 1397, 2248, 2326, 3105
BseNI ACTGG 4 cut(s) 566, 840, 1133, 1822
BseRI GAGGAG 3 cut(s) 110, 878, 1161
BseXI GCAGC 6 cut(s) 1010, 1080, 1559, 1604, 2109, 2214
BsgI GTGCAG 1 cut(s) 1087
Bsh1236I CGCG 1 cut(s) 2653
BshFI GGCC 2 cut(s) 1199, 1233
BshVI ATCGAT 1 cut(s) 1260
BsiHKAI GWGCWC 3 cut(s) 2487, 2788, 3082
BsiHKCI CYCGRG 2 cut(s) 2480, 2606
BsiSI CCGG 4 cut(s) 495, 870, 1436, 2322
BslFI GGGAC 4 cut(s) 846, 1693, 1818, 2180
BslI CCNNNNNNNGG 3 cut(s) 188, 226, 3073
BsmFI GGGAC 4 cut(s) 846, 1693, 1818, 2180
BsmI GAATGC 3 cut(s) 953, 1841, 2653
BsnI GGCC 2 cut(s) 1199, 1233
BsoBI CYCGRG 2 cut(s) 2480, 2606
Bsp119I TTCGAA 1 cut(s) 2683
Bsp1286I GDGCHC 5 cut(s) 530, 870, 2487, 2788, 3082
Bsp13I TCCGGA 1 cut(s) 1435
Bsp1407I TGTACA 1 cut(s) 2560
Bsp1720I GCTNAGC 1 cut(s) 215
Bsp19I CCATGG 1 cut(s) 2391
BspACI CCGC 6 cut(s) 127, 306, 996, 2653, 2699, 3199
BspANI GGCC 2 cut(s) 1199, 1233
BspCNI CTCAG 7 cut(s) 228, 1014, 1299, 1398, 2247, 2325, 3106
BspDI ATCGAT 1 cut(s) 1260
BspEI TCCGGA 1 cut(s) 1435
BspFNI CGCG 1 cut(s) 2653
BspHI TCATGA 2 cut(s) 1974, 3148
BspLI GGNNCC 6 cut(s) 529, 867, 1857, 2070, 2389, 2603
BspMAI CTGCAG 1 cut(s) 1577
BspPI GGATC 3 cut(s) 2596, 2609, 2806
BspQI GCTCTTC 3 cut(s) 414, 1982, 3102
BspT104I TTCGAA 1 cut(s) 2683
BspTI CTTAAG 1 cut(s) 347
BsrDI GCAATG 1 cut(s) 1694
BsrGI TGTACA 1 cut(s) 2560
BsrI ACTGG 4 cut(s) 566, 840, 1133, 1822
BssECI CCNNGG 5 cut(s) 1649, 2391, 2488, 2489, 2998
BssNI GRCGYC 1 cut(s) 2702
BssT1I CCWWGG 3 cut(s) 1649, 2391, 2998
Bst2UI CCWGG 3 cut(s) 1532, 2490, 2757
Bst4CI ACNGT 8 cut(s) 545, 602, 943, 1205, 2051, 2222, 2985, 3175
Bst6I CTCTTC 5 cut(s) 414, 1107, 1982, 2871, 3102
BstACI GRCGYC 1 cut(s) 2702
BstAFI CTTAAG 1 cut(s) 347
BstAUI TGTACA 1 cut(s) 2560
BstBAI YACGTR 1 cut(s) 3040
BstBI TTCGAA 1 cut(s) 2683
BstC8I GCNNGC 3 cut(s) 429, 1583, 2413
BstDSI CCRYGG 1 cut(s) 2391
BstF5I GGATG 7 cut(s) 699, 907, 1418, 2273, 2647, 2731, 2921
BstFNI CGCG 1 cut(s) 2653
BstHHI GCGC 1 cut(s) 2653
BstMWI GCNNNNNNNGC 2 cut(s) 1578, 2352
BstNI CCWGG 3 cut(s) 1532, 2490, 2757
BstNSI RCATGY 1 cut(s) 681
BstSCI CCNGG 4 cut(s) 868, 1530, 2488, 2755
BstSFI CTRYAG 3 cut(s) 186, 1573, 2038
BstUI CGCG 1 cut(s) 2653
BstV1I GCAGC 6 cut(s) 1010, 1080, 1559, 1604, 2109, 2214
BstV2I GAAGAC 2 cut(s) 1085, 2810
BstX2I RGATCY 8 cut(s) 163, 1035, 1297, 1552, 2164, 2377, 2601, 2798
BstYI RGATCY 8 cut(s) 163, 1035, 1297, 1552, 2164, 2377, 2601, 2798
Bsu15I ATCGAT 1 cut(s) 1260
BsuI GTATCC 2 cut(s) 1130, 2397
BsuRI GGCC 2 cut(s) 1199, 1233
BsuTUI ATCGAT 1 cut(s) 1260
BtgI CCRYGG 1 cut(s) 2391
BtsCI GGATG 7 cut(s) 699, 907, 1418, 2273, 2647, 2731, 2921
BtsI GCAGTG 1 cut(s) 860
BtsIMutI CAGTG 6 cut(s) 541, 860, 1126, 1815, 3111, 3180
Cac8I GCNNGC 3 cut(s) 429, 1583, 2413
CaiI CAGNNNCTG 2 cut(s) 935, 1478
CciI TCATGA 2 cut(s) 1974, 3148
CfoI GCGC 1 cut(s) 2653
Cfr13I GGNCC 2 cut(s) 1198, 3034
ClaI ATCGAT 1 cut(s) 1260
CseI GACGC 2 cut(s) 2681, 2691
Csp6I GTAC 6 cut(s) 134, 222, 230, 1078, 2495, 2561
CspCI CAANNNNNGTGG 2 cut(s) 462, 497
CviQI GTAC 6 cut(s) 134, 222, 230, 1078, 2495, 2561
DraI TTTAAA 2 cut(s) 1251, 2217
DraIII CACNNNGTG 1 cut(s) 2713
Eam1104I CTCTTC 5 cut(s) 414, 1107, 1982, 2871, 3102
EarI CTCTTC 5 cut(s) 414, 1107, 1982, 2871, 3102
EciI GGCGGA 1 cut(s) 3188
Ecl136II GAGCTC 2 cut(s) 2485, 2786
Eco130I CCWWGG 3 cut(s) 1649, 2391, 2998
Eco24I GRGCYC 4 cut(s) 530, 870, 2487, 2788
Eco32I GATATC 1 cut(s) 1537
Eco47I GGWCC 1 cut(s) 3034
Eco53kI GAGCTC 2 cut(s) 2485, 2786
Eco57I CTGAAG 5 cut(s) 51, 395, 1079, 1107, 1892
Eco72I CACGTG 1 cut(s) 3040
Eco88I CYCGRG 2 cut(s) 2480, 2606
EcoICRI GAGCTC 2 cut(s) 2485, 2786
EcoRII CCWGG 3 cut(s) 1530, 2488, 2755
EcoRV GATATC 1 cut(s) 1537
EcoT14I CCWWGG 3 cut(s) 1649, 2391, 2998
EcoT22I ATGCAT 2 cut(s) 813, 953
EcoT38I GRGCYC 4 cut(s) 530, 870, 2487, 2788
ErhI CCWWGG 3 cut(s) 1649, 2391, 2998
FaqI GGGAC 4 cut(s) 846, 1693, 1818, 2180
FauI CCCGC 1 cut(s) 1003
FauNDI CATATG 1 cut(s) 1781
Fnu4HI GCNGC 7 cut(s) 999, 1069, 1573, 1618, 2123, 2203, 2700
FokI GGATG 7 cut(s) 706, 914, 1425, 2260, 2654, 2738, 2928
FriOI GRGCYC 4 cut(s) 530, 870, 2487, 2788
Fsp4HI GCNGC 7 cut(s) 999, 1069, 1573, 1618, 2123, 2203, 2700
FspBI CTAG 7 cut(s) 278, 330, 509, 803, 1050, 1650, 2084
GlaI GCGC 1 cut(s) 2652
GluI GCNGC 7 cut(s) 999, 1069, 1573, 1618, 2123, 2203, 2700
GsuI CTGGAG 1 cut(s) 1052
HaeIII GGCC 2 cut(s) 1199, 1233
HapII CCGG 4 cut(s) 495, 870, 1436, 2322
HgaI GACGC 2 cut(s) 2681, 2691
HhaI GCGC 1 cut(s) 2653
Hin1I GRCGYC 1 cut(s) 2702
Hin6I GCGC 1 cut(s) 2651
HinP1I GCGC 1 cut(s) 2651
HincII GTYRAC 1 cut(s) 1186
HindII GTYRAC 1 cut(s) 1186
HindIII AAGCTT 3 cut(s) 2018, 2183, 2424
HpaI GTTAAC 1 cut(s) 1186
HpaII CCGG 4 cut(s) 495, 870, 1436, 2322
HphI GGTGA 5 cut(s) 35, 296, 1520, 3002, 3014
Hpy166II GTNNAC 1 cut(s) 1186
Hpy8I GTNNAC 1 cut(s) 1186
Hpy99I CGWCG 1 cut(s) 2675
HpyCH4III ACNGT 8 cut(s) 545, 602, 943, 1205, 2051, 2222, 2985, 3175
HpyCH4IV ACGT 5 cut(s) 703, 1080, 2080, 2497, 3039
HpyF10VI GCNNNNNNNGC 2 cut(s) 1578, 2352
HpySE526I ACGT 5 cut(s) 703, 1080, 2080, 2497, 3039
Hsp92I GRCGYC 1 cut(s) 2702
HspAI GCGC 1 cut(s) 2651
Kpn2I TCCGGA 1 cut(s) 1435
KspAI GTTAAC 1 cut(s) 1186
LguI GCTCTTC 3 cut(s) 414, 1982, 3102
LmnI GCTCC 7 cut(s) 533, 865, 1855, 2068, 2490, 2783, 3077
Lsp1109I GCAGC 6 cut(s) 1010, 1080, 1559, 1604, 2109, 2214
LweI GCATC 5 cut(s) 352, 1403, 2214, 2424, 3128
MaeI CTAG 7 cut(s) 278, 330, 509, 803, 1050, 1650, 2084
MaeII ACGT 5 cut(s) 703, 1080, 2080, 2497, 3039
MaeIII GTNAC 4 cut(s) 629, 2703, 2740, 3109
MfeI CAATTG 3 cut(s) 266, 572, 1707
MflI RGATCY 8 cut(s) 163, 1035, 1297, 1552, 2164, 2377, 2601, 2798
MhlI GDGCHC 5 cut(s) 530, 870, 2487, 2788, 3082
MlyI GAGTC 6 cut(s) 42, 107, 437, 1318, 1987, 2545
MmeI TCCRAC 1 cut(s) 2703
Mph1103I ATGCAT 2 cut(s) 813, 953
MroI TCCGGA 1 cut(s) 1435
MroXI GAANNNNTTC 3 cut(s) 408, 843, 1092
MslI CAYNNNNRTG 2 cut(s) 1193, 3105
MspCI CTTAAG 1 cut(s) 347
MspI CCGG 4 cut(s) 495, 870, 1436, 2322
MspR9I CCNGG 4 cut(s) 870, 1532, 2490, 2757
MunI CAATTG 3 cut(s) 266, 572, 1707
Mva1269I GAATGC 3 cut(s) 953, 1841, 2653
MvaI CCWGG 3 cut(s) 1532, 2490, 2757
MvnI CGCG 1 cut(s) 2653
MwoI GCNNNNNNNGC 2 cut(s) 1578, 2352
NciI CCSGG 1 cut(s) 870
NcoI CCATGG 1 cut(s) 2391
NdeI CATATG 1 cut(s) 1781
NlaIV GGNNCC 6 cut(s) 529, 867, 1857, 2070, 2389, 2603
NmeAIII GCCGAG 1 cut(s) 2410
NmuCI GTSAC 2 cut(s) 2703, 3109
NsiI ATGCAT 2 cut(s) 813, 953
NspI RCATGY 1 cut(s) 681
NspV TTCGAA 1 cut(s) 2683
OliI CACNNNNGTG 1 cut(s) 3105
PagI TCATGA 2 cut(s) 1974, 3148
PasI CCCWGGG 1 cut(s) 2489
PciSI GCTCTTC 3 cut(s) 414, 1982, 3102
PcsI WCGNNNNNNNCGW 1 cut(s) 2689
PctI GAATGC 3 cut(s) 953, 1841, 2653
PdmI GAANNNNTTC 3 cut(s) 408, 843, 1092
PfeI GAWTC 8 cut(s) 257, 315, 991, 1420, 1561, 1971, 2043, 2717
PfoI TCCNGGA 1 cut(s) 2755
PkrI GCNGC 7 cut(s) 1000, 1070, 1574, 1619, 2124, 2204, 2701
PleI GAGTC 6 cut(s) 42, 106, 437, 1317, 1986, 2545
PmaCI CACGTG 1 cut(s) 3040
PmlI CACGTG 1 cut(s) 3040
PpsI GAGTC 6 cut(s) 42, 106, 437, 1317, 1986, 2545
Ppu21I YACGTR 1 cut(s) 3040
PsiI TTATAA 2 cut(s) 323, 518
Psp124BI GAGCTC 2 cut(s) 2487, 2788
Psp6I CCWGG 3 cut(s) 1530, 2488, 2755
PspCI CACGTG 1 cut(s) 3040
PspGI CCWGG 3 cut(s) 1530, 2488, 2755
PspN4I GGNNCC 6 cut(s) 529, 867, 1857, 2070, 2389, 2603
PspPI GGNCC 2 cut(s) 1198, 3034
PsrI GAACNNNNNNTAC 2 cut(s) 222, 254
PstI CTGCAG 1 cut(s) 1577
PstNI CAGNNNCTG 2 cut(s) 935, 1478
PsuI RGATCY 8 cut(s) 163, 1035, 1297, 1552, 2164, 2377, 2601, 2798
RsaI GTAC 6 cut(s) 135, 223, 231, 1079, 2496, 2562
RsaNI GTAC 6 cut(s) 134, 222, 230, 1078, 2495, 2561
RseI CAYNNNNRTG 2 cut(s) 1193, 3105
SacI GAGCTC 2 cut(s) 2487, 2788
SapI GCTCTTC 3 cut(s) 414, 1982, 3102
SatI GCNGC 7 cut(s) 999, 1069, 1573, 1618, 2123, 2203, 2700
Sau96I GGNCC 2 cut(s) 1198, 3034
SchI GAGTC 6 cut(s) 42, 107, 437, 1318, 1987, 2545
ScrFI CCNGG 4 cut(s) 870, 1532, 2490, 2757
SduI GDGCHC 5 cut(s) 530, 870, 2487, 2788, 3082
SfaNI GCATC 5 cut(s) 352, 1403, 2214, 2424, 3128
SfcI CTRYAG 3 cut(s) 186, 1573, 2038
SfuI TTCGAA 1 cut(s) 2683
SinI GGWCC 1 cut(s) 3034
SmiMI CAYNNNNRTG 2 cut(s) 1193, 3105
SmlI CTYRAG 4 cut(s) 347, 1556, 1799, 2186
SmoI CTYRAG 4 cut(s) 347, 1556, 1799, 2186
SsiI CCGC 6 cut(s) 127, 306, 996, 2653, 2699, 3199
SspI AATATT 2 cut(s) 172, 1151
SspMI CTAG 7 cut(s) 278, 330, 509, 803, 1050, 1650, 2084
SstI GAGCTC 2 cut(s) 2487, 2788
StyD4I CCNGG 4 cut(s) 868, 1530, 2488, 2755
StyI CCWWGG 3 cut(s) 1649, 2391, 2998
TaaI ACNGT 8 cut(s) 545, 602, 943, 1205, 2051, 2222, 2985, 3175
TaiI ACGT 5 cut(s) 706, 1083, 2083, 2500, 3042
TatI WGTACW 2 cut(s) 133, 2560
TauI GCSGC 1 cut(s) 2702
TfiI GAWTC 8 cut(s) 257, 315, 991, 1420, 1561, 1971, 2043, 2717
TscAI CASTG 6 cut(s) 548, 860, 1133, 1822, 3118, 3180
TseFI GTSAC 2 cut(s) 2703, 3109
TseI GCWGC 6 cut(s) 998, 1068, 1572, 1617, 2122, 2202
Tsp45I GTSAC 2 cut(s) 2703, 3109
TspGWI ACGGA 1 cut(s) 2159
TspRI CASTG 6 cut(s) 548, 860, 1133, 1822, 3118, 3180
Vha464I CTTAAG 1 cut(s) 347
VpaK11BI GGWCC 1 cut(s) 3034
XbaI TCTAGA 1 cut(s) 2083
XceI RCATGY 1 cut(s) 681
XcmI CCANNNNNNNNNTGG 1 cut(s) 2496
XmaJI CCTAGG 1 cut(s) 1649
XmnI GAANNNNTTC 3 cut(s) 408, 843, 1092
XspI CTAG 7 cut(s) 278, 330, 509, 803, 1050, 1650, 2084
Zsp2I ATGCAT 2 cut(s) 813, 953
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.