Disease resistance protein (TIR-NBS-LRR class)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 11 - 180 | 1.6e-55 | TIR domain |
| TIR_2 | PF13676 | 13 - 122 | 2.5e-14 | TIR domain |
| NB-ARC | PF00931 | 211 - 364 | 5.7e-17 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 439 - 508 | 1.5e-17 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 747 - 820 | 3.1e-08 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 805 - 987 | 8.4e-10 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 818 - 884 | 4.6e-06 | Leucine-rich repeat region |
| C-JID | PF20160 | 1049 - 1192 | 2.8e-14 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 3039 |
| AatII | GACGTC | 1 cut(s) | 3390 |
| Acc16I | TGCGCA | 1 cut(s) | 3435 |
| Acc36I | ACCTGC | 1 cut(s) | 172 |
| AccBSI | CCGCTC | 1 cut(s) | 147 |
| AccI | GTMKAC | 1 cut(s) | 2818 |
| AccII | CGCG | 1 cut(s) | 759 |
| AccIII | TCCGGA | 1 cut(s) | 1899 |
| AciI | CCGC | 7 cut(s) | 5, 67, 147, 759, 1412, 1730, 1813 |
| AclI | AACGTT | 1 cut(s) | 593 |
| AclWI | GGATC | 7 cut(s) | 314, 847, 871, 2439, 2452, 2997, 3227 |
| AcuI | CTGAAG | 6 cut(s) | 1064, 1262, 1842, 2867, 2966, 3249 |
| AcyI | GRCGYC | 1 cut(s) | 3387 |
| AdeI | CACNNNGTG | 2 cut(s) | 240, 617 |
| AfaI | GTAC | 3 cut(s) | 333, 1132, 2164 |
| AfeI | AGCGCT | 1 cut(s) | 383 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 343, 346, 836, 1747 |
| AflIII | ACRYGT | 3 cut(s) | 19, 328, 1440 |
| AjiI | CACGTC | 1 cut(s) | 3403 |
| AjnI | CCWGG | 4 cut(s) | 402, 613, 1540, 3243 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 912, 944, 2541, 2573 |
| Alw21I | GWGCWC | 3 cut(s) | 411, 786, 2901 |
| Alw26I | GTCTC | 9 cut(s) | 28, 748, 1449, 1791, 1897, 2202, 2396, 2505, 2600 |
| AlwI | GGATC | 7 cut(s) | 314, 847, 871, 2439, 2452, 2997, 3227 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1012 |
| Aor13HI | TCCGGA | 1 cut(s) | 1899 |
| Aor51HI | AGCGCT | 1 cut(s) | 383 |
| AoxI | GGCC | 3 cut(s) | 1817, 2560, 3421 |
| ApeKI | GCWGC | 5 cut(s) | 437, 1163, 1890, 2739, 2934 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1077, 1259, 1614 |
| AspA2I | CCTAGG | 1 cut(s) | 1928 |
| AspLEI | GCGC | 4 cut(s) | 384, 1551, 1764, 3436 |
| AspS9I | GGNCC | 3 cut(s) | 161, 400, 630 |
| AsuC2I | CCSGG | 1 cut(s) | 1887 |
| AsuHPI | GGTGA | 5 cut(s) | 803, 944, 3364, 3395, 3550 |
| AvaII | GGWCC | 3 cut(s) | 161, 400, 630 |
| AvrII | CCTAGG | 1 cut(s) | 1928 |
| AxyI | CCTNAGG | 1 cut(s) | 1569 |
| BaeGI | GKGCMC | 1 cut(s) | 1567 |
| BamHI | GGATCC | 1 cut(s) | 2444 |
| BanII | GRGCYC | 2 cut(s) | 786, 2901 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 23, 55 |
| BbsI | GAAGAC | 2 cut(s) | 31, 2954 |
| Bbv12I | GWGCWC | 3 cut(s) | 411, 786, 2901 |
| BbvCI | CCTCAGC | 2 cut(s) | 1013, 2849 |
| BbvI | GCAGC | 5 cut(s) | 449, 1150, 1902, 2726, 2921 |
| BccI | CCATC | 9 cut(s) | 93, 331, 391, 1678, 2648, 2911, 3326, 3342, 3503 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2578, 2612 |
| BciT130I | CCWGG | 4 cut(s) | 404, 615, 1542, 3245 |
| BclI | TGATCA | 2 cut(s) | 204, 934 |
| BcnI | CCSGG | 1 cut(s) | 1887 |
| BcoDI | GTCTC | 9 cut(s) | 28, 748, 1449, 1791, 1897, 2202, 2396, 2505, 2600 |
| BfaI | CTAG | 8 cut(s) | 27, 978, 1061, 1929, 2451, 2555, 2726, 2844 |
| BfmI | CTRYAG | 1 cut(s) | 2346 |
| BfoI | RGCGCY | 1 cut(s) | 385 |
| BfuAI | ACCTGC | 1 cut(s) | 172 |
| BglII | AGATCT | 2 cut(s) | 1777, 1984 |
| BisI | GCNGC | 6 cut(s) | 6, 438, 1164, 1891, 2740, 2935 |
| BlnI | CCTAGG | 1 cut(s) | 1928 |
| BlsI | GCNGC | 6 cut(s) | 7, 439, 1165, 1892, 2741, 2936 |
| BmcAI | AGTACT | 1 cut(s) | 2164 |
| Bme1390I | CCNGG | 5 cut(s) | 404, 615, 1542, 1887, 3245 |
| Bme18I | GGWCC | 3 cut(s) | 161, 400, 630 |
| BmgBI | CACGTC | 1 cut(s) | 3403 |
| BmgT120I | GGNCC | 3 cut(s) | 161, 400, 630 |
| BmiI | GGNNCC | 3 cut(s) | 1198, 2446, 2481 |
| BmrFI | CCNGG | 5 cut(s) | 404, 615, 1542, 1887, 3245 |
| BmsI | GCATC | 8 cut(s) | 585, 670, 778, 993, 1294, 1384, 1470, 3076 |
| BpiI | GAAGAC | 2 cut(s) | 31, 2954 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2522, 2554 |
| BpmI | CTGGAG | 1 cut(s) | 1140 |
| Bpu10I | CCTNAGC | 4 cut(s) | 952, 1013, 1177, 2849 |
| BpuEI | CTTGAG | 6 cut(s) | 161, 395, 1653, 1802, 2657, 3555 |
| BpuMI | CCSGG | 1 cut(s) | 1887 |
| BsaBI | GATNNNNATC | 3 cut(s) | 3090, 3301, 3366 |
| BsaHI | GRCGYC | 1 cut(s) | 3387 |
| BsaI | GGTCTC | 1 cut(s) | 2202 |
| BsaJI | CCNNGG | 4 cut(s) | 787, 1928, 2734, 3244 |
| BsaWI | WCCGGW | 1 cut(s) | 1899 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 343, 346, 836, 1747 |
| Bse1I | ACTGG | 2 cut(s) | 540, 1395 |
| Bse21I | CCTNAGG | 1 cut(s) | 1569 |
| Bse3DI | GCAATG | 1 cut(s) | 481 |
| Bse8I | GATNNNNATC | 3 cut(s) | 3090, 3301, 3366 |
| BseAI | TCCGGA | 1 cut(s) | 1899 |
| BseBI | CCWGG | 4 cut(s) | 404, 615, 1542, 3245 |
| BseDI | CCNNGG | 4 cut(s) | 787, 1928, 2734, 3244 |
| BseGI | GGATG | 8 cut(s) | 402, 576, 1399, 1485, 1579, 3061, 3088, 3197 |
| BseJI | GATNNNNATC | 3 cut(s) | 3090, 3301, 3366 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 343, 346, 836, 1747 |
| BseMI | GCAATG | 1 cut(s) | 481 |
| BseNI | ACTGG | 2 cut(s) | 540, 1395 |
| BseRI | GAGGAG | 1 cut(s) | 1656 |
| BseSI | GKGCMC | 1 cut(s) | 1567 |
| BseXI | GCAGC | 5 cut(s) | 449, 1150, 1902, 2726, 2921 |
| BsgI | GTGCAG | 1 cut(s) | 2955 |
| Bsh1236I | CGCG | 1 cut(s) | 759 |
| BshFI | GGCC | 3 cut(s) | 1819, 2562, 3423 |
| BsiHKAI | GWGCWC | 3 cut(s) | 411, 786, 2901 |
| BsiSI | CCGG | 2 cut(s) | 1887, 1900 |
| BslFI | GGGAC | 3 cut(s) | 593, 2317, 2591 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 343, 346, 836, 1747 |
| BsmAI | GTCTC | 9 cut(s) | 28, 748, 1449, 1791, 1897, 2202, 2396, 2505, 2600 |
| BsmBI | CGTCTC | 1 cut(s) | 748 |
| BsmFI | GGGAC | 3 cut(s) | 593, 2317, 2591 |
| BsmI | GAATGC | 2 cut(s) | 275, 1170 |
| BsnI | GGCC | 3 cut(s) | 1819, 2562, 3423 |
| Bso31I | GGTCTC | 1 cut(s) | 2202 |
| Bsp1286I | GDGCHC | 4 cut(s) | 411, 786, 1567, 2901 |
| Bsp13I | TCCGGA | 1 cut(s) | 1899 |
| Bsp1407I | TGTACA | 1 cut(s) | 1130 |
| BspACI | CCGC | 7 cut(s) | 5, 67, 147, 759, 1412, 1730, 1813 |
| BspANI | GGCC | 3 cut(s) | 1819, 2562, 3423 |
| BspEI | TCCGGA | 1 cut(s) | 1899 |
| BspFNI | CGCG | 1 cut(s) | 759 |
| BspHI | TCATGA | 4 cut(s) | 516, 1717, 1954, 2200 |
| BspLI | GGNNCC | 3 cut(s) | 1198, 2446, 2481 |
| BspMAI | CTGCAG | 1 cut(s) | 2350 |
| BspMI | ACCTGC | 1 cut(s) | 172 |
| BspPI | GGATC | 7 cut(s) | 314, 847, 871, 2439, 2452, 2997, 3227 |
| BspQI | GCTCTTC | 2 cut(s) | 372, 1091 |
| BspTNI | GGTCTC | 1 cut(s) | 2202 |
| BsrBI | CCGCTC | 1 cut(s) | 147 |
| BsrDI | GCAATG | 1 cut(s) | 481 |
| BsrGI | TGTACA | 1 cut(s) | 1130 |
| BsrI | ACTGG | 2 cut(s) | 540, 1395 |
| BssECI | CCNNGG | 4 cut(s) | 787, 1928, 2734, 3244 |
| BssNAI | GTATAC | 1 cut(s) | 2819 |
| BssNI | GRCGYC | 1 cut(s) | 3387 |
| BssT1I | CCWWGG | 2 cut(s) | 787, 1928 |
| Bst1107I | GTATAC | 1 cut(s) | 2819 |
| Bst2UI | CCWGG | 4 cut(s) | 404, 615, 1542, 3245 |
| Bst4CI | ACNGT | 7 cut(s) | 600, 634, 1469, 1968, 2492, 2953, 3441 |
| Bst6I | CTCTTC | 6 cut(s) | 372, 1091, 1794, 2427, 2545, 2913 |
| BstACI | GRCGYC | 1 cut(s) | 3387 |
| BstAUI | TGTACA | 1 cut(s) | 1130 |
| BstC8I | GCNNGC | 3 cut(s) | 1168, 1817, 3560 |
| BstDSI | CCRYGG | 1 cut(s) | 2734 |
| BstF5I | GGATG | 8 cut(s) | 402, 576, 1399, 1485, 1579, 3061, 3088, 3197 |
| BstFNI | CGCG | 1 cut(s) | 759 |
| BstH2I | RGCGCY | 1 cut(s) | 385 |
| BstHHI | GCGC | 4 cut(s) | 384, 1551, 1764, 3436 |
| BstMAI | GTCTC | 9 cut(s) | 28, 748, 1449, 1791, 1897, 2202, 2396, 2505, 2600 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 781, 957, 1546, 1761, 1882, 2775, 3260, 3467 |
| BstNI | CCWGG | 4 cut(s) | 404, 615, 1542, 3245 |
| BstNSI | RCATGY | 6 cut(s) | 23, 332, 1350, 1401, 1444, 2717 |
| BstSCI | CCNGG | 5 cut(s) | 402, 613, 1540, 1885, 3243 |
| BstSFI | CTRYAG | 1 cut(s) | 2346 |
| BstSLI | GKGCMC | 1 cut(s) | 1567 |
| BstUI | CGCG | 1 cut(s) | 759 |
| BstV1I | GCAGC | 5 cut(s) | 449, 1150, 1902, 2726, 2921 |
| BstV2I | GAAGAC | 2 cut(s) | 31, 2954 |
| BstX2I | RGATCY | 7 cut(s) | 319, 839, 876, 1777, 1984, 2444, 3232 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1969 |
| BstYI | RGATCY | 7 cut(s) | 319, 839, 876, 1777, 1984, 2444, 3232 |
| BstZ17I | GTATAC | 1 cut(s) | 2819 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1569 |
| BsuRI | GGCC | 3 cut(s) | 1819, 2562, 3423 |
| BtgI | CCRYGG | 1 cut(s) | 2734 |
| BtgZI | GCGATG | 1 cut(s) | 72 |
| BtrI | CACGTC | 1 cut(s) | 3403 |
| BtsCI | GGATG | 8 cut(s) | 402, 576, 1399, 1485, 1579, 3061, 3088, 3197 |
| BtsIMutI | CAGTG | 3 cut(s) | 1998, 2488, 2958 |
| BveI | ACCTGC | 1 cut(s) | 172 |
| Cac8I | GCNNGC | 3 cut(s) | 1168, 1817, 3560 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1012 |
| CciI | TCATGA | 4 cut(s) | 516, 1717, 1954, 2200 |
| CfoI | GCGC | 4 cut(s) | 384, 1551, 1764, 3436 |
| Cfr13I | GGNCC | 3 cut(s) | 161, 400, 630 |
| CpoI | CGGWCCG | 1 cut(s) | 630 |
| CseI | GACGC | 3 cut(s) | 765, 2829, 2933 |
| CsiI | ACCWGGT | 2 cut(s) | 402, 613 |
| Csp6I | GTAC | 3 cut(s) | 332, 1131, 2163 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2121, 2156 |
| CspI | CGGWCCG | 1 cut(s) | 630 |
| CviQI | GTAC | 3 cut(s) | 332, 1131, 2163 |
| DraIII | CACNNNGTG | 2 cut(s) | 240, 617 |
| Eam1104I | CTCTTC | 6 cut(s) | 372, 1091, 1794, 2427, 2545, 2913 |
| EarI | CTCTTC | 6 cut(s) | 372, 1091, 1794, 2427, 2545, 2913 |
| Ecl136II | GAGCTC | 2 cut(s) | 784, 2899 |
| Eco130I | CCWWGG | 2 cut(s) | 787, 1928 |
| Eco24I | GRGCYC | 2 cut(s) | 786, 2901 |
| Eco31I | GGTCTC | 1 cut(s) | 2202 |
| Eco47I | GGWCC | 3 cut(s) | 161, 400, 630 |
| Eco47III | AGCGCT | 1 cut(s) | 383 |
| Eco53kI | GAGCTC | 2 cut(s) | 784, 2899 |
| Eco57I | CTGAAG | 6 cut(s) | 1064, 1262, 1842, 2867, 2966, 3249 |
| Eco81I | CCTNAGG | 1 cut(s) | 1569 |
| EcoICRI | GAGCTC | 2 cut(s) | 784, 2899 |
| EcoRI | GAATTC | 3 cut(s) | 2275, 3061, 3479 |
| EcoRII | CCWGG | 4 cut(s) | 402, 613, 1540, 3243 |
| EcoT14I | CCWWGG | 2 cut(s) | 787, 1928 |
| EcoT22I | ATGCAT | 3 cut(s) | 1309, 1399, 1485 |
| EcoT38I | GRGCYC | 2 cut(s) | 786, 2901 |
| ErhI | CCWWGG | 2 cut(s) | 787, 1928 |
| Esp3I | CGTCTC | 1 cut(s) | 748 |
| FaqI | GGGAC | 3 cut(s) | 593, 2317, 2591 |
| FauI | CCCGC | 2 cut(s) | 74, 1405 |
| FbaI | TGATCA | 2 cut(s) | 204, 934 |
| FblI | GTMKAC | 1 cut(s) | 2818 |
| Fnu4HI | GCNGC | 6 cut(s) | 6, 438, 1164, 1891, 2740, 2935 |
| FokI | GGATG | 8 cut(s) | 409, 563, 1406, 1492, 1586, 3068, 3095, 3204 |
| FriOI | GRGCYC | 2 cut(s) | 786, 2901 |
| Fsp4HI | GCNGC | 6 cut(s) | 6, 438, 1164, 1891, 2740, 2935 |
| FspBI | CTAG | 8 cut(s) | 27, 978, 1061, 1929, 2451, 2555, 2726, 2844 |
| FspI | TGCGCA | 1 cut(s) | 3435 |
| GlaI | GCGC | 4 cut(s) | 383, 1550, 1763, 3435 |
| GluI | GCNGC | 6 cut(s) | 6, 438, 1164, 1891, 2740, 2935 |
| GsuI | CTGGAG | 1 cut(s) | 1140 |
| HaeII | RGCGCY | 1 cut(s) | 385 |
| HaeIII | GGCC | 3 cut(s) | 1819, 2562, 3423 |
| HapII | CCGG | 2 cut(s) | 1887, 1900 |
| HgaI | GACGC | 3 cut(s) | 765, 2829, 2933 |
| HhaI | GCGC | 4 cut(s) | 384, 1551, 1764, 3436 |
| Hin1I | GRCGYC | 1 cut(s) | 3387 |
| Hin6I | GCGC | 4 cut(s) | 382, 1549, 1762, 3434 |
| HinP1I | GCGC | 4 cut(s) | 382, 1549, 1762, 3434 |
| HincII | GTYRAC | 1 cut(s) | 695 |
| HindII | GTYRAC | 1 cut(s) | 695 |
| HindIII | AAGCTT | 3 cut(s) | 714, 1125, 2075 |
| HpaII | CCGG | 2 cut(s) | 1887, 1900 |
| HphI | GGTGA | 5 cut(s) | 803, 944, 3364, 3395, 3550 |
| Hpy166II | GTNNAC | 4 cut(s) | 695, 2819, 3444, 3522 |
| Hpy8I | GTNNAC | 4 cut(s) | 695, 2819, 3444, 3522 |
| Hpy99I | CGWCG | 2 cut(s) | 506, 2788 |
| HpyCH4III | ACNGT | 7 cut(s) | 600, 634, 1469, 1968, 2492, 2953, 3441 |
| HpyCH4IV | ACGT | 5 cut(s) | 593, 1519, 2783, 3387, 3402 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 781, 957, 1546, 1761, 1882, 2775, 3260, 3467 |
| HpySE526I | ACGT | 5 cut(s) | 593, 1519, 2783, 3387, 3402 |
| Hsp92I | GRCGYC | 1 cut(s) | 3387 |
| HspAI | GCGC | 4 cut(s) | 382, 1549, 1762, 3434 |
| Kpn2I | TCCGGA | 1 cut(s) | 1899 |
| Ksp22I | TGATCA | 2 cut(s) | 204, 934 |
| LguI | GCTCTTC | 2 cut(s) | 372, 1091 |
| LmnI | GCTCC | 3 cut(s) | 789, 2479, 2904 |
| Lsp1109I | GCAGC | 5 cut(s) | 449, 1150, 1902, 2726, 2921 |
| LweI | GCATC | 8 cut(s) | 585, 670, 778, 993, 1294, 1384, 1470, 3076 |
| MabI | ACCWGGT | 2 cut(s) | 402, 613 |
| MaeI | CTAG | 8 cut(s) | 27, 978, 1061, 1929, 2451, 2555, 2726, 2844 |
| MaeII | ACGT | 5 cut(s) | 593, 1519, 2783, 3387, 3402 |
| MaeIII | GTNAC | 5 cut(s) | 594, 1469, 2154, 3268, 3383 |
| MbiI | CCGCTC | 1 cut(s) | 147 |
| MfeI | CAATTG | 5 cut(s) | 180, 1512, 2331, 2358, 2875 |
| MflI | RGATCY | 7 cut(s) | 319, 839, 876, 1777, 1984, 2444, 3232 |
| MhlI | GDGCHC | 4 cut(s) | 411, 786, 1567, 2901 |
| MlyI | GAGTC | 7 cut(s) | 488, 507, 1657, 1793, 1952, 2347, 2398 |
| MmeI | TCCRAC | 1 cut(s) | 2130 |
| Mph1103I | ATGCAT | 3 cut(s) | 1309, 1399, 1485 |
| MroI | TCCGGA | 1 cut(s) | 1899 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1077, 1259, 1614 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1095 |
| MspA1I | CMGCKG | 1 cut(s) | 1815 |
| MspI | CCGG | 2 cut(s) | 1887, 1900 |
| MspR9I | CCNGG | 5 cut(s) | 404, 615, 1542, 1887, 3245 |
| MunI | CAATTG | 5 cut(s) | 180, 1512, 2331, 2358, 2875 |
| Mva1269I | GAATGC | 2 cut(s) | 275, 1170 |
| MvaI | CCWGG | 4 cut(s) | 404, 615, 1542, 3245 |
| MvnI | CGCG | 1 cut(s) | 759 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 781, 957, 1546, 1761, 1882, 2775, 3260, 3467 |
| NciI | CCSGG | 1 cut(s) | 1887 |
| NlaIV | GGNNCC | 3 cut(s) | 1198, 2446, 2481 |
| NmuCI | GTSAC | 1 cut(s) | 3383 |
| NsbI | TGCGCA | 1 cut(s) | 3435 |
| NsiI | ATGCAT | 3 cut(s) | 1309, 1399, 1485 |
| NspI | RCATGY | 6 cut(s) | 23, 332, 1350, 1401, 1444, 2717 |
| PagI | TCATGA | 4 cut(s) | 516, 1717, 1954, 2200 |
| PciI | ACATGT | 3 cut(s) | 19, 328, 1440 |
| PciSI | GCTCTTC | 2 cut(s) | 372, 1091 |
| PctI | GAATGC | 2 cut(s) | 275, 1170 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1077, 1259, 1614 |
| PflFI | GACNNNGTC | 1 cut(s) | 2953 |
| PkrI | GCNGC | 6 cut(s) | 7, 439, 1165, 1892, 2741, 2936 |
| PleI | GAGTC | 7 cut(s) | 487, 506, 1657, 1792, 1952, 2346, 2397 |
| PpsI | GAGTC | 7 cut(s) | 487, 506, 1657, 1792, 1952, 2346, 2397 |
| PscI | ACATGT | 3 cut(s) | 19, 328, 1440 |
| PsiI | TTATAA | 1 cut(s) | 3039 |
| Psp124BI | GAGCTC | 2 cut(s) | 786, 2901 |
| Psp1406I | AACGTT | 1 cut(s) | 593 |
| Psp6I | CCWGG | 4 cut(s) | 402, 613, 1540, 3243 |
| PspGI | CCWGG | 4 cut(s) | 402, 613, 1540, 3243 |
| PspN4I | GGNNCC | 3 cut(s) | 1198, 2446, 2481 |
| PspPI | GGNCC | 3 cut(s) | 161, 400, 630 |
| PstI | CTGCAG | 1 cut(s) | 2350 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1012 |
| PsuI | RGATCY | 7 cut(s) | 319, 839, 876, 1777, 1984, 2444, 3232 |
| PsyI | GACNNNGTC | 1 cut(s) | 2953 |
| RsaI | GTAC | 3 cut(s) | 333, 1132, 2164 |
| RsaNI | GTAC | 3 cut(s) | 332, 1131, 2163 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1095 |
| Rsr2I | CGGWCCG | 1 cut(s) | 630 |
| RsrII | CGGWCCG | 1 cut(s) | 630 |
| SacI | GAGCTC | 2 cut(s) | 786, 2901 |
| SapI | GCTCTTC | 2 cut(s) | 372, 1091 |
| SatI | GCNGC | 6 cut(s) | 6, 438, 1164, 1891, 2740, 2935 |
| Sau96I | GGNCC | 3 cut(s) | 161, 400, 630 |
| ScaI | AGTACT | 1 cut(s) | 2164 |
| SchI | GAGTC | 7 cut(s) | 488, 507, 1657, 1793, 1952, 2347, 2398 |
| ScrFI | CCNGG | 5 cut(s) | 404, 615, 1542, 1887, 3245 |
| SduI | GDGCHC | 4 cut(s) | 411, 786, 1567, 2901 |
| SexAI | ACCWGGT | 2 cut(s) | 402, 613 |
| SfaNI | GCATC | 8 cut(s) | 585, 670, 778, 993, 1294, 1384, 1470, 3076 |
| SfcI | CTRYAG | 1 cut(s) | 2346 |
| SinI | GGWCC | 3 cut(s) | 161, 400, 630 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1095 |
| SmlI | CTYRAG | 6 cut(s) | 140, 410, 1668, 1781, 2636, 3570 |
| SmoI | CTYRAG | 6 cut(s) | 140, 410, 1668, 1781, 2636, 3570 |
| SsiI | CCGC | 7 cut(s) | 5, 67, 147, 759, 1412, 1730, 1813 |
| SspI | AATATT | 2 cut(s) | 736, 2005 |
| SspMI | CTAG | 8 cut(s) | 27, 978, 1061, 1929, 2451, 2555, 2726, 2844 |
| SstI | GAGCTC | 2 cut(s) | 786, 2901 |
| StyD4I | CCNGG | 5 cut(s) | 402, 613, 1540, 1885, 3243 |
| StyI | CCWWGG | 2 cut(s) | 787, 1928 |
| TaaI | ACNGT | 7 cut(s) | 600, 634, 1469, 1968, 2492, 2953, 3441 |
| TaiI | ACGT | 5 cut(s) | 596, 1522, 2786, 3390, 3405 |
| TaqI | TCGA | 3 cut(s) | 504, 2598, 2963 |
| TatI | WGTACW | 2 cut(s) | 1130, 2162 |
| TauI | GCSGC | 1 cut(s) | 8 |
| TscAI | CASTG | 3 cut(s) | 1998, 2495, 2958 |
| TseFI | GTSAC | 1 cut(s) | 3383 |
| TseI | GCWGC | 5 cut(s) | 437, 1163, 1890, 2739, 2934 |
| Tsp45I | GTSAC | 1 cut(s) | 3383 |
| TspGWI | ACGGA | 4 cut(s) | 190, 1103, 2723, 3339 |
| TspRI | CASTG | 3 cut(s) | 1998, 2495, 2958 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2953 |
| VpaK11BI | GGWCC | 3 cut(s) | 161, 400, 630 |
| XceI | RCATGY | 6 cut(s) | 23, 332, 1350, 1401, 1444, 2717 |
| XmaJI | CCTAGG | 1 cut(s) | 1928 |
| XmiI | GTMKAC | 1 cut(s) | 2818 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1077, 1259, 1614 |
| XspI | CTAG | 8 cut(s) | 27, 978, 1061, 1929, 2451, 2555, 2726, 2844 |
| ZraI | GACGTC | 1 cut(s) | 3388 |
| ZrmI | AGTACT | 1 cut(s) | 2164 |
| Zsp2I | ATGCAT | 3 cut(s) | 1309, 1399, 1485 |