MD05G1137900.v1.1

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
26826874 .. 26832887
6014 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1137900.v1.1.491

Sequence Viewer

Length: 2250 bp
ATGGAAAAAGAAAACAACCAAGAGAACAGAAAAAACAGGAATCGATCAGGTGACGATGATGATACTGATTGTGAGGGGAGCAAAGCAAGGATAAAAGCTGATTCTACTGATGTTGCTGATGATGATGCTGATATTCCCCCTCATCTAAAAGAGTATGATGTGTTTATCAGCTCCAGTGGTAAGGACACCCGCCTAGGTATTACCAGCCATCTTCAAGCTGCCTTACTTCAGAAGAAAATTAAAACCTACACCGATAATACGCATCTTCGGAGTGGAGAAGAAATTGTACTTGCCCCTCAGGAAGCAATTAAGAAATCCACGATTTCGGTGATCATTTTCTCACAAAACTATGCTTCTTCCACATGGTGTTTGGATGAGCTTGTGCATATACTCAAATGCAAGGAAAGATACCGCCAGGTGGTCGTACCCGTATTCTACAACATCAATCCATCTGATGTACAAAAACAACACGGGAGTTATGCGGATGCATTTGCTCAGCACCAAAAACGTTTCAAGGACAGTATCGAGACGGTGCACAAGTGGAGGGATGCTTTGAAGACTGCAGCCAATCTATCTGGGTTTAATTATTCAAACAAATCCGGGAAGGAGGCAGATCTAATTAAGAATGTTGTCCATCATATTTGGACCAAATTGATTTGTGAATCATCATGGGATTTAGAGGGCCTGGTTGGAATTAAAAGCCGCATCGAGCAAATTGAAGAGCTATTGGGCATTCATTCACCGAACGCTTGCATCACTGTAGGTATTTGGGGCATGGGTGGTATTGGCAAGACCACCCTTGCTGAAACTATCTTTCACAAACTCTCCTCTAAATTCGAAGCCTCTTGTTTTCTTAGAAATGTGAGGGAGAGAGGACAAAAAGATGGGCTACAAAACTTGGAAAATGCACTTCTCAGTGAGATATTAAAGGAAGAAGGTCTATCCATAGGATCAACTTTTGTTCGAGAAAGGCTCAGCCGTACAAAGGTCCTCATTGTTCTTGATGATGTGAGTGATTCAATGCAAATGGAACGTTTAGTTGGGAATCGTCTTCGGTTTGGCACTGGAAGTAGAATCATTATCACAAGTAGAGATAGGGGCACTCTTAGGCAAACTGTTGAAGAGGACAAGATCTACGAGGTTGAGGGTTTAAAACTGGGCGAAGCTCTTGACCTCTTCCATTTGCATGCTTTCAAGAATAACAGTATTCGTAGAACAGATTGTGAGGAGTTGGCAGAAAAGGTCGTGGATTATGCTGGAGGACTTCCTTTAGCTATTATAGTTCTGGGGTCCTTTTTCTTCAATTGCAAGAGCAAAGAAGACTGGGAAGATAAATTCAACAGAATTGGAAAATGGCTCAAGAATAATATCCAGCAAGTGTTGAGCATAAGTTATGATAGATTGGATAAAAATGCAAAGGAGATATTTCTGGATATAGCATGTTTTCATAAAGGGAGGCATGTGGACGAGGTAAAAAGAATGTTAGATGTCCGTGGATTATTTGGAGCAGCTGGAATTAAAGTTCTCGTTGATATGTCTCTCATATCAATTCATTCAAAATGGGGAATCATAGAGATGCATAATTTGCTTGAAGAAGCGGGAAGGACAATTGTTAAGGAGCAATGTATTGAAGATCCTGGTAAACGTAATAGATTGTTCAACGACGAAGATGTTTACCATGTATTGGAAAGTAACAGGGAAATTCCAAATGTTCAAGTCATATCGGTTAATTGGTATCAGTTTAAAGAGCGACCATTGAAACGTGCAGACTTCAGTAAGATGCCTAACCTAATGATGCTAATTGCTTTTAGCAGTGATGTGTTTGGCAATTGCTTCAAATTCACCGCTTCTCTAGACCTTCCCGATTCACTTCGTTATCTTTACTGGTGTCAATATCCTTTGGAATCTTTGCCGTCAAATTTTTCTCCGGAAAATCTAGTTGAGCTTCATATGCCATATAGCAATGTTAAGAAGCTTTGGAAAAAAGACCAGAGACTTGCGAACTTAGAAGTTATCGATTTGCACCACTCTAAATATCTAACTGACGTTCCAAATCTCTCTGGGAGTCTAAAAATTATGGACATAGATCTCTTTGGCTGTGAAAGTTTGGTTGAAATTCCTTGGCATTTTCAACAGCTTGACAAGCTTACTTGTCTTGATCTTGGAGGTTGTGCCAGTCTGAAGTATCTTCCAGAGATGCCAAGAAATATTAAATACTTGGATTTACATGACTGCACATCTCTTGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

750

Amino Acids

85.52

Weight (kDa)

6.25

Isoelectric Point (pI)

39.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 52 - 230 1.9e-46 TIR domain
TIR_2 PF13676 54 - 166 1.5e-13 TIR domain
NB-ARC PF00931 236 - 401 2.1e-19 NB-ARC domain
NACHT PF05729 254 - 387 1.1e-06 NACHT domain
WHD_ROQ1 PF23282 470 - 541 4.9e-18 Disease resistance protein Roq1-like, winged-helix domain
LRR_3 PF07725 645 - 661 6.9e-06 Leucine Rich Repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1684
AccIII TCCGGA 1 cut(s) 1927
AciI CCGC 6 cut(s) 190, 412, 482, 703, 1598, 1845
AclI AACGTT 2 cut(s) 508, 1033
AclWI GGATC 2 cut(s) 958, 1628
AcsI RAATTY 6 cut(s) 833, 1334, 1701, 1838, 1918, 2115
AcuI CTGAAG 3 cut(s) 212, 1756, 2201
AdeI CACNNNGTG 1 cut(s) 366
AfaI GTAC 4 cut(s) 288, 426, 459, 982
AfiI CCNNNNNNNGG 3 cut(s) 418, 985, 1684
AjnI CCWGG 3 cut(s) 414, 684, 1636
AjuI GAANNNNNNNTTGG 2 cut(s) 1023, 1055
AloI GAACNNNNNNTCC 2 cut(s) 1506, 1538
Alw21I GWGCWC 1 cut(s) 537
Alw26I GTCTC 3 cut(s) 521, 1542, 1987
Alw44I GTGCAC 1 cut(s) 533
AlwI GGATC 2 cut(s) 958, 1628
Aor13HI TCCGGA 1 cut(s) 1927
AoxI GGCC 1 cut(s) 682
ApaLI GTGCAC 1 cut(s) 533
ApeKI GCWGC 3 cut(s) 218, 563, 1508
ApoI RAATTY 6 cut(s) 833, 1334, 1701, 1838, 1918, 2115
AspA2I CCTAGG 1 cut(s) 193
AspS9I GGNCC 4 cut(s) 645, 682, 988, 1290
AsuC2I CCSGG 1 cut(s) 601
AsuHPI GGTGA 4 cut(s) 62, 340, 732, 1834
AsuII TTCGAA 1 cut(s) 837
AvaII GGWCC 3 cut(s) 645, 988, 1290
AvrII CCTAGG 1 cut(s) 193
AxyI CCTNAGG 1 cut(s) 297
BaeGI GKGCMC 2 cut(s) 537, 1103
BarI GAAGNNNNNNTAC 2 cut(s) 270, 302
BbsI GAAGAC 3 cut(s) 563, 1043, 1326
Bbv12I GWGCWC 1 cut(s) 537
BbvI GCAGC 3 cut(s) 205, 575, 1520
BccI CCATC 4 cut(s) 216, 457, 642, 878
BceAI ACGGC 2 cut(s) 963, 1897
BciT130I CCWGG 3 cut(s) 416, 686, 1638
BclI TGATCA 1 cut(s) 330
BcnI CCSGG 1 cut(s) 601
BcoDI GTCTC 3 cut(s) 521, 1542, 1987
BfaI CTAG 4 cut(s) 194, 1853, 1937, 2248
BfmI CTRYAG 2 cut(s) 561, 759
BglII AGATCT 3 cut(s) 613, 1131, 2086
BisI GCNGC 4 cut(s) 219, 564, 703, 1509
BlnI CCTAGG 1 cut(s) 193
BlpI GCTNAGC 2 cut(s) 495, 974
BlsI GCNGC 4 cut(s) 220, 565, 704, 1510
Bme1390I CCNGG 4 cut(s) 416, 601, 686, 1638
Bme18I GGWCC 3 cut(s) 645, 988, 1290
BmgT120I GGNCC 4 cut(s) 645, 682, 988, 1290
BmiI GGNNCC 1 cut(s) 1291
BmrFI CCNGG 4 cut(s) 416, 601, 686, 1638
BmrI ACTGGG 2 cut(s) 1166, 1333
BmuI ACTGGG 2 cut(s) 1166, 1333
BpiI GAAGAC 3 cut(s) 563, 1043, 1326
BplI GAGNNNNNCTC 2 cut(s) 957, 989
BpmI CTGGAG 2 cut(s) 157, 1278
Bpu1102I GCTNAGC 2 cut(s) 495, 974
Bpu14I TTCGAA 1 cut(s) 837
BpuEI CTTGAG 1 cut(s) 1343
BpuMI CCSGG 1 cut(s) 601
Bsa29I ATCGAT 2 cut(s) 43, 2016
BsaJI CCNNGG 3 cut(s) 193, 1492, 2120
BsaWI WCCGGW 1 cut(s) 1927
BsaXI ACNNNNNCTCC 2 cut(s) 809, 839
Bsc4I CCNNNNNNNGG 3 cut(s) 418, 985, 1684
Bse1I ACTGG 6 cut(s) 174, 1069, 1161, 1328, 1889, 2175
Bse21I CCTNAGG 1 cut(s) 297
Bse3DI GCAATG 2 cut(s) 1628, 1969
BseAI TCCGGA 1 cut(s) 1927
BseBI CCWGG 3 cut(s) 416, 686, 1638
BseCI ATCGAT 2 cut(s) 43, 2016
BseDI CCNNGG 3 cut(s) 193, 1492, 2120
BseGI GGATG 3 cut(s) 379, 490, 553
BseLI CCNNNNNNNGG 3 cut(s) 418, 985, 1684
BseMI GCAATG 2 cut(s) 1628, 1969
BseMII CTCAG 4 cut(s) 311, 509, 928, 988
BseNI ACTGG 6 cut(s) 174, 1069, 1161, 1328, 1889, 2175
BseRI GAGGAG 2 cut(s) 817, 1241
BseSI GKGCMC 2 cut(s) 537, 1103
BseXI GCAGC 3 cut(s) 205, 575, 1520
BsgI GTGCAG 2 cut(s) 1785, 2218
BshFI GGCC 1 cut(s) 684
BshVI ATCGAT 2 cut(s) 43, 2016
BsiHKAI GWGCWC 1 cut(s) 537
BsiSI CCGG 2 cut(s) 600, 1928
BslI CCNNNNNNNGG 3 cut(s) 418, 985, 1684
BsmAI GTCTC 3 cut(s) 521, 1542, 1987
BsmBI CGTCTC 1 cut(s) 521
BsmI GAATGC 1 cut(s) 732
BsnI GGCC 1 cut(s) 684
Bsp119I TTCGAA 1 cut(s) 837
Bsp1286I GDGCHC 2 cut(s) 537, 1103
Bsp13I TCCGGA 1 cut(s) 1927
Bsp1407I TGTACA 1 cut(s) 457
Bsp143I GATC 8 cut(s) 44, 330, 613, 950, 1131, 1633, 2086, 2158
Bsp1720I GCTNAGC 2 cut(s) 495, 974
BspACI CCGC 6 cut(s) 190, 412, 482, 703, 1598, 1845
BspANI GGCC 1 cut(s) 684
BspCNI CTCAG 4 cut(s) 310, 508, 927, 987
BspDI ATCGAT 2 cut(s) 43, 2016
BspEI TCCGGA 1 cut(s) 1927
BspLI GGNNCC 1 cut(s) 1291
BspMAI CTGCAG 1 cut(s) 565
BspPI GGATC 2 cut(s) 958, 1628
BspQI GCTCTTC 1 cut(s) 714
BspT104I TTCGAA 1 cut(s) 837
BsrDI GCAATG 2 cut(s) 1628, 1969
BsrGI TGTACA 1 cut(s) 457
BsrI ACTGG 6 cut(s) 174, 1069, 1161, 1328, 1889, 2175
BssECI CCNNGG 3 cut(s) 193, 1492, 2120
BssMI GATC 8 cut(s) 44, 330, 613, 950, 1131, 1633, 2086, 2158
BssT1I CCWWGG 2 cut(s) 193, 2120
Bst2UI CCWGG 3 cut(s) 416, 686, 1638
Bst4CI ACNGT 5 cut(s) 521, 532, 760, 1117, 1205
Bst6I CTCTTC 3 cut(s) 714, 1116, 1181
BstAPI GCANNNNNTGC 1 cut(s) 1585
BstAUI TGTACA 1 cut(s) 457
BstBI TTCGAA 1 cut(s) 837
BstC8I GCNNGC 2 cut(s) 751, 1188
BstDEI CTNAG 7 cut(s) 297, 495, 854, 914, 974, 1106, 2005
BstDSI CCRYGG 1 cut(s) 1492
BstF5I GGATG 3 cut(s) 379, 490, 553
BstKTI GATC 8 cut(s) 47, 333, 616, 953, 1134, 1636, 2089, 2161
BstMAI GTCTC 3 cut(s) 521, 1542, 1987
BstMBI GATC 8 cut(s) 44, 330, 613, 950, 1131, 1633, 2086, 2158
BstMWI GCNNNNNNNGC 3 cut(s) 1585, 1951, 2143
BstNI CCWGG 3 cut(s) 416, 686, 1638
BstNSI RCATGY 3 cut(s) 1190, 1443, 1463
BstSCI CCNGG 4 cut(s) 414, 599, 684, 1636
BstSFI CTRYAG 2 cut(s) 561, 759
BstSLI GKGCMC 2 cut(s) 537, 1103
BstV1I GCAGC 3 cut(s) 205, 575, 1520
BstV2I GAAGAC 3 cut(s) 563, 1043, 1326
BstX2I RGATCY 4 cut(s) 613, 1131, 1633, 2086
BstYI RGATCY 4 cut(s) 613, 1131, 1633, 2086
Bsu15I ATCGAT 2 cut(s) 43, 2016
Bsu36I CCTNAGG 1 cut(s) 297
BsuRI GGCC 1 cut(s) 684
BsuTUI ATCGAT 2 cut(s) 43, 2016
BtgI CCRYGG 1 cut(s) 1492
BtsCI GGATG 3 cut(s) 379, 490, 553
BtsI GCAGTG 1 cut(s) 1819
BtsIMutI CAGTG 5 cut(s) 181, 756, 922, 1062, 1819
Cac8I GCNNGC 2 cut(s) 751, 1188
Cfr13I GGNCC 4 cut(s) 645, 682, 988, 1290
ClaI ATCGAT 2 cut(s) 43, 2016
Csp6I GTAC 4 cut(s) 287, 425, 458, 981
CviAII CATG 8 cut(s) 363, 669, 775, 1187, 1440, 1460, 1679, 2228
CviQI GTAC 4 cut(s) 287, 425, 458, 981
DdeI CTNAG 7 cut(s) 297, 495, 854, 914, 974, 1106, 2005
DpnI GATC 8 cut(s) 46, 332, 615, 952, 1133, 1635, 2088, 2160
DpnII GATC 8 cut(s) 44, 330, 613, 950, 1131, 1633, 2086, 2158
DraI TTTAAA 2 cut(s) 1152, 1744
DraIII CACNNNGTG 1 cut(s) 366
Eam1104I CTCTTC 3 cut(s) 714, 1116, 1181
EarI CTCTTC 3 cut(s) 714, 1116, 1181
Eco130I CCWWGG 2 cut(s) 193, 2120
Eco47I GGWCC 3 cut(s) 645, 988, 1290
Eco57I CTGAAG 3 cut(s) 212, 1756, 2201
Eco81I CCTNAGG 1 cut(s) 297
EcoO109I RGGNCCY 3 cut(s) 682, 988, 1290
EcoRII CCWGG 3 cut(s) 414, 684, 1636
EcoT14I CCWWGG 2 cut(s) 193, 2120
EcoT22I ATGCAT 2 cut(s) 490, 1581
ErhI CCWWGG 2 cut(s) 193, 2120
Esp3I CGTCTC 1 cut(s) 521
FaeI CATG 8 cut(s) 366, 672, 778, 1190, 1443, 1463, 1682, 2231
FatI CATG 8 cut(s) 362, 668, 774, 1186, 1439, 1459, 1678, 2227
FauI CCCGC 2 cut(s) 197, 1591
FauNDI CATATG 1 cut(s) 1950
FbaI TGATCA 1 cut(s) 330
Fnu4HI GCNGC 4 cut(s) 219, 564, 703, 1509
FokI GGATG 3 cut(s) 386, 497, 560
Fsp4HI GCNGC 4 cut(s) 219, 564, 703, 1509
FspBI CTAG 4 cut(s) 194, 1853, 1937, 2248
GluI GCNGC 4 cut(s) 219, 564, 703, 1509
GsuI CTGGAG 2 cut(s) 157, 1278
HaeIII GGCC 1 cut(s) 684
HapII CCGG 2 cut(s) 600, 1928
Hin1II CATG 8 cut(s) 366, 672, 778, 1190, 1443, 1463, 1682, 2231
HindIII AAGCTT 2 cut(s) 1973, 2144
HpaII CCGG 2 cut(s) 600, 1928
HphI GGTGA 4 cut(s) 62, 340, 732, 1834
Hpy166II GTNNAC 4 cut(s) 535, 1465, 1643, 1675
Hpy188I TCNGA 4 cut(s) 231, 270, 454, 2181
Hpy8I GTNNAC 4 cut(s) 535, 1465, 1643, 1675
Hpy99I CGWCG 1 cut(s) 1667
HpyAV CCTTC 4 cut(s) 598, 929, 1596, 1868
HpyCH4III ACNGT 5 cut(s) 521, 532, 760, 1117, 1205
HpyCH4IV ACGT 5 cut(s) 508, 1033, 1645, 1762, 2046
HpyF10VI GCNNNNNNNGC 3 cut(s) 1585, 1951, 2143
HpyF3I CTNAG 7 cut(s) 297, 495, 854, 914, 974, 1106, 2005
HpySE526I ACGT 5 cut(s) 508, 1033, 1645, 1762, 2046
Hsp92II CATG 8 cut(s) 366, 672, 778, 1190, 1443, 1463, 1682, 2231
Kpn2I TCCGGA 1 cut(s) 1927
Ksp22I TGATCA 1 cut(s) 330
Kzo9I GATC 8 cut(s) 44, 330, 613, 950, 1131, 1633, 2086, 2158
LguI GCTCTTC 1 cut(s) 714
LmnI GCTCC 4 cut(s) 78, 176, 1505, 1618
Lsp1109I GCAGC 3 cut(s) 205, 575, 1520
MaeI CTAG 4 cut(s) 194, 1853, 1937, 2248
MaeII ACGT 5 cut(s) 508, 1033, 1645, 1762, 2046
MaeIII GTNAC 2 cut(s) 50, 1691
MalI GATC 8 cut(s) 46, 332, 615, 952, 1133, 1635, 2088, 2160
MboI GATC 8 cut(s) 44, 330, 613, 950, 1131, 1633, 2086, 2158
MfeI CAATTG 3 cut(s) 1303, 1608, 1828
MflI RGATCY 4 cut(s) 613, 1131, 1633, 2086
MhlI GDGCHC 2 cut(s) 537, 1103
MlyI GAGTC 1 cut(s) 2074
MmeI TCCRAC 1 cut(s) 670
Mph1103I ATGCAT 2 cut(s) 490, 1581
MroI TCCGGA 1 cut(s) 1927
MslI CAYNNNNRTG 2 cut(s) 1185, 1574
MspA1I CMGCKG 1 cut(s) 1511
MspI CCGG 2 cut(s) 600, 1928
MspR9I CCNGG 4 cut(s) 416, 601, 686, 1638
MunI CAATTG 3 cut(s) 1303, 1608, 1828
Mva1269I GAATGC 1 cut(s) 732
MvaI CCWGG 3 cut(s) 416, 686, 1638
MwoI GCNNNNNNNGC 3 cut(s) 1585, 1951, 2143
NciI CCSGG 1 cut(s) 601
NdeI CATATG 1 cut(s) 1950
NdeII GATC 8 cut(s) 44, 330, 613, 950, 1131, 1633, 2086, 2158
NlaIII CATG 8 cut(s) 366, 672, 778, 1190, 1443, 1463, 1682, 2231
NlaIV GGNNCC 1 cut(s) 1291
NmuCI GTSAC 1 cut(s) 50
NsiI ATGCAT 2 cut(s) 490, 1581
NspI RCATGY 3 cut(s) 1190, 1443, 1463
NspV TTCGAA 1 cut(s) 837
PaeI GCATGC 1 cut(s) 1190
PciSI GCTCTTC 1 cut(s) 714
PctI GAATGC 1 cut(s) 732
PfeI GAWTC 9 cut(s) 40, 101, 662, 1016, 1045, 1074, 1566, 1865, 1904
PflMI CCANNNNNTGG 1 cut(s) 1684
PfoI TCCNGGA 1 cut(s) 599
PkrI GCNGC 4 cut(s) 220, 565, 704, 1510
PleI GAGTC 1 cut(s) 2073
PpsI GAGTC 1 cut(s) 2073
PpuMI RGGWCCY 2 cut(s) 988, 1290
Psp1406I AACGTT 2 cut(s) 508, 1033
Psp5II RGGWCCY 2 cut(s) 988, 1290
Psp6I CCWGG 3 cut(s) 414, 684, 1636
PspGI CCWGG 3 cut(s) 414, 684, 1636
PspN4I GGNNCC 1 cut(s) 1291
PspPI GGNCC 4 cut(s) 645, 682, 988, 1290
PspPPI RGGWCCY 2 cut(s) 988, 1290
PstI CTGCAG 1 cut(s) 565
PsuI RGATCY 4 cut(s) 613, 1131, 1633, 2086
PvuII CAGCTG 1 cut(s) 1511
RsaI GTAC 4 cut(s) 288, 426, 459, 982
RsaNI GTAC 4 cut(s) 287, 425, 458, 981
RseI CAYNNNNRTG 2 cut(s) 1185, 1574
SapI GCTCTTC 1 cut(s) 714
SatI GCNGC 4 cut(s) 219, 564, 703, 1509
Sau3AI GATC 8 cut(s) 44, 330, 613, 950, 1131, 1633, 2086, 2158
Sau96I GGNCC 4 cut(s) 645, 682, 988, 1290
SchI GAGTC 1 cut(s) 2074
ScrFI CCNGG 4 cut(s) 416, 601, 686, 1638
SduI GDGCHC 2 cut(s) 537, 1103
SfcI CTRYAG 2 cut(s) 561, 759
SfuI TTCGAA 1 cut(s) 837
SinI GGWCC 3 cut(s) 645, 988, 1290
SmiMI CAYNNNNRTG 2 cut(s) 1185, 1574
SmlI CTYRAG 1 cut(s) 1358
SmoI CTYRAG 1 cut(s) 1358
SphI GCATGC 1 cut(s) 1190
SsiI CCGC 6 cut(s) 190, 412, 482, 703, 1598, 1845
SspI AATATT 1 cut(s) 2209
SspMI CTAG 4 cut(s) 194, 1853, 1937, 2248
StyD4I CCNGG 4 cut(s) 414, 599, 684, 1636
StyI CCWWGG 2 cut(s) 193, 2120
TaaI ACNGT 5 cut(s) 521, 532, 760, 1117, 1205
TaiI ACGT 5 cut(s) 511, 1036, 1648, 1765, 2049
TaqI TCGA 6 cut(s) 43, 525, 708, 837, 964, 2016
TatI WGTACW 2 cut(s) 286, 457
TauI GCSGC 1 cut(s) 705
TfiI GAWTC 9 cut(s) 40, 101, 662, 1016, 1045, 1074, 1566, 1865, 1904
TscAI CASTG 5 cut(s) 181, 763, 922, 1069, 1819
TseFI GTSAC 1 cut(s) 50
TseI GCWGC 3 cut(s) 218, 563, 1508
Tsp45I GTSAC 1 cut(s) 50
TspDTI ATGAA 4 cut(s) 725, 1436, 1541, 1937
TspGWI ACGGA 1 cut(s) 1481
TspRI CASTG 5 cut(s) 181, 763, 922, 1069, 1819
Van91I CCANNNNNTGG 1 cut(s) 1684
VneI GTGCAC 1 cut(s) 533
VpaK11BI GGWCC 3 cut(s) 645, 988, 1290
XapI RAATTY 6 cut(s) 833, 1334, 1701, 1838, 1918, 2115
XbaI TCTAGA 1 cut(s) 1852
XceI RCATGY 3 cut(s) 1190, 1443, 1463
XcmI CCANNNNNNNNNTGG 1 cut(s) 367
XmaJI CCTAGG 1 cut(s) 193
XspI CTAG 4 cut(s) 194, 1853, 1937, 2248
Zsp2I ATGCAT 2 cut(s) 490, 1581
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.