TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NTP_transferase | PF00483 | 25 - 165 | 5.6e-12 | Nucleotidyl transferase |
| LbH_EIF2B | PF25084 | 319 - 422 | 1.9e-38 | EIF2B subunit epsilon LbH domain |
| GMPPB_C | PF25087 | 332 - 416 | 2.1e-09 | GMPPB C-terminal domain |
| Hexapep | PF00132 | 340 - 371 | 2.4e-07 | Bacterial transferase hexapeptide (six repeats) |
| W2 | PF02020 | 646 - 724 | 5.5e-18 | eIF4-gamma/eIF5/eIF2-epsilon |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 910, 1034 |
| AccII | CGCG | 1 cut(s) | 23 |
| AciI | CCGC | 2 cut(s) | 836, 1980 |
| AclI | AACGTT | 1 cut(s) | 1104 |
| AclWI | GGATC | 3 cut(s) | 554, 622, 1586 |
| AcsI | RAATTY | 7 cut(s) | 104, 819, 1059, 1066, 1365, 1955, 2103 |
| AcuI | CTGAAG | 6 cut(s) | 18, 729, 838, 1602, 1928, 2175 |
| AcvI | CACGTG | 1 cut(s) | 59 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 70, 1044, 1423, 1619 |
| AflIII | ACRYGT | 3 cut(s) | 58, 174, 411 |
| AjnI | CCWGG | 2 cut(s) | 69, 384 |
| Alw21I | GWGCWC | 3 cut(s) | 10, 232, 546 |
| Alw26I | GTCTC | 2 cut(s) | 1421, 1613 |
| Alw44I | GTGCAC | 1 cut(s) | 6 |
| AlwI | GGATC | 3 cut(s) | 554, 622, 1586 |
| AoxI | GGCC | 3 cut(s) | 72, 1439, 1498 |
| ApaLI | GTGCAC | 1 cut(s) | 6 |
| ApeKI | GCWGC | 4 cut(s) | 574, 1155, 1568, 1602 |
| ApoI | RAATTY | 7 cut(s) | 104, 819, 1059, 1066, 1365, 1955, 2103 |
| AspLEI | GCGC | 3 cut(s) | 23, 345, 360 |
| AspS9I | GGNCC | 3 cut(s) | 1010, 1097, 1864 |
| AsuHPI | GGTGA | 6 cut(s) | 88, 283, 289, 498, 1132, 1570 |
| AvaII | GGWCC | 3 cut(s) | 1010, 1097, 1864 |
| AxyI | CCTNAGG | 1 cut(s) | 45 |
| BaeGI | GKGCMC | 2 cut(s) | 10, 536 |
| BanI | GGYRCC | 2 cut(s) | 910, 1034 |
| BanII | GRGCYC | 1 cut(s) | 546 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 850, 882, 1278, 1310 |
| BbrPI | CACGTG | 1 cut(s) | 59 |
| BbsI | GAAGAC | 2 cut(s) | 45, 645 |
| Bbv12I | GWGCWC | 3 cut(s) | 10, 232, 546 |
| BbvCI | CCTCAGC | 2 cut(s) | 716, 1554 |
| BbvI | GCAGC | 4 cut(s) | 586, 1142, 1555, 1614 |
| BccI | CCATC | 7 cut(s) | 83, 122, 888, 1145, 1178, 1592, 1658 |
| BceAI | ACGGC | 1 cut(s) | 130 |
| BciT130I | CCWGG | 2 cut(s) | 71, 386 |
| BciVI | GTATCC | 1 cut(s) | 391 |
| BclI | TGATCA | 1 cut(s) | 165 |
| BcoDI | GTCTC | 2 cut(s) | 1421, 1613 |
| BfaI | CTAG | 3 cut(s) | 27, 840, 1331 |
| BfmI | CTRYAG | 3 cut(s) | 1173, 1539, 1569 |
| BfuI | GTATCC | 1 cut(s) | 391 |
| BisI | GCNGC | 5 cut(s) | 575, 837, 1156, 1569, 1603 |
| BlsI | GCNGC | 5 cut(s) | 576, 838, 1157, 1570, 1604 |
| Bme1390I | CCNGG | 2 cut(s) | 71, 386 |
| Bme18I | GGWCC | 3 cut(s) | 1010, 1097, 1864 |
| BmgT120I | GGNCC | 3 cut(s) | 1010, 1097, 1864 |
| BmiI | GGNNCC | 3 cut(s) | 912, 1036, 1669 |
| BmrFI | CCNGG | 2 cut(s) | 71, 386 |
| BmrI | ACTGGG | 2 cut(s) | 539, 1362 |
| BmsI | GCATC | 3 cut(s) | 325, 2074, 2159 |
| BmuI | ACTGGG | 2 cut(s) | 539, 1362 |
| BpiI | GAAGAC | 2 cut(s) | 45, 645 |
| BpmI | CTGGAG | 3 cut(s) | 53, 1604, 1818 |
| Bpu10I | CCTNAGC | 4 cut(s) | 716, 1163, 1554, 1983 |
| BpuEI | CTTGAG | 1 cut(s) | 209 |
| BsaAI | YACGTR | 1 cut(s) | 59 |
| BsaWI | WCCGGW | 1 cut(s) | 1387 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 366, 396, 1319, 1349, 1418, 1448 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 70, 1044, 1423, 1619 |
| Bse1I | ACTGG | 2 cut(s) | 534, 1357 |
| Bse21I | CCTNAGG | 1 cut(s) | 45 |
| Bse3DI | GCAATG | 1 cut(s) | 367 |
| BseBI | CCWGG | 2 cut(s) | 71, 386 |
| BseGI | GGATG | 6 cut(s) | 75, 969, 1582, 1720, 2074, 2170 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 70, 1044, 1423, 1619 |
| BseMI | GCAATG | 1 cut(s) | 367 |
| BseMII | CTCAG | 8 cut(s) | 36, 437, 730, 990, 1440, 1545, 1751, 2051 |
| BseNI | ACTGG | 2 cut(s) | 534, 1357 |
| BseRI | GAGGAG | 3 cut(s) | 71, 221, 1340 |
| BseSI | GKGCMC | 2 cut(s) | 10, 536 |
| BseXI | GCAGC | 4 cut(s) | 586, 1142, 1555, 1614 |
| BsgI | GTGCAG | 1 cut(s) | 984 |
| Bsh1236I | CGCG | 1 cut(s) | 23 |
| BshFI | GGCC | 3 cut(s) | 74, 1441, 1500 |
| BshNI | GGYRCC | 2 cut(s) | 910, 1034 |
| BsiHKAI | GWGCWC | 3 cut(s) | 10, 232, 546 |
| BsiSI | CCGG | 2 cut(s) | 330, 1388 |
| BslFI | GGGAC | 3 cut(s) | 47, 1061, 1253 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 70, 1044, 1423, 1619 |
| BsmAI | GTCTC | 2 cut(s) | 1421, 1613 |
| BsmFI | GGGAC | 3 cut(s) | 47, 1061, 1253 |
| BsmI | GAATGC | 1 cut(s) | 1519 |
| BsnI | GGCC | 3 cut(s) | 74, 1441, 1500 |
| Bsp1286I | GDGCHC | 4 cut(s) | 10, 232, 536, 546 |
| Bsp143I | GATC | 6 cut(s) | 165, 559, 614, 995, 1579, 1591 |
| BspACI | CCGC | 2 cut(s) | 836, 1980 |
| BspANI | GGCC | 3 cut(s) | 74, 1441, 1500 |
| BspCNI | CTCAG | 8 cut(s) | 37, 436, 729, 989, 1441, 1546, 1752, 2052 |
| BspFNI | CGCG | 1 cut(s) | 23 |
| BspLI | GGNNCC | 3 cut(s) | 912, 1036, 1669 |
| BspMAI | CTGCAG | 2 cut(s) | 1543, 1573 |
| BspPI | GGATC | 3 cut(s) | 554, 622, 1586 |
| BspT107I | GGYRCC | 2 cut(s) | 910, 1034 |
| BsrDI | GCAATG | 1 cut(s) | 367 |
| BsrI | ACTGG | 2 cut(s) | 534, 1357 |
| BssMI | GATC | 6 cut(s) | 165, 559, 614, 995, 1579, 1591 |
| Bst2UI | CCWGG | 2 cut(s) | 71, 386 |
| Bst4CI | ACNGT | 7 cut(s) | 295, 403, 495, 1021, 1319, 1793, 2025 |
| Bst6I | CTCTTC | 6 cut(s) | 1503, 1647, 1929, 2043, 2154, 2166 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 605, 1793 |
| BstBAI | YACGTR | 1 cut(s) | 59 |
| BstC8I | GCNNGC | 5 cut(s) | 199, 642, 1160, 1170, 2118 |
| BstF5I | GGATG | 6 cut(s) | 75, 969, 1582, 1720, 2074, 2170 |
| BstFNI | CGCG | 1 cut(s) | 23 |
| BstHHI | GCGC | 3 cut(s) | 23, 345, 360 |
| BstKTI | GATC | 6 cut(s) | 168, 562, 617, 998, 1582, 1594 |
| BstMAI | GTCTC | 2 cut(s) | 1421, 1613 |
| BstMBI | GATC | 6 cut(s) | 165, 559, 614, 995, 1579, 1591 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 29, 335, 605, 1793 |
| BstNI | CCWGG | 2 cut(s) | 71, 386 |
| BstNSI | RCATGY | 4 cut(s) | 415, 608, 1172, 1385 |
| BstSCI | CCNGG | 2 cut(s) | 69, 384 |
| BstSFI | CTRYAG | 3 cut(s) | 1173, 1539, 1569 |
| BstSLI | GKGCMC | 2 cut(s) | 10, 536 |
| BstUI | CGCG | 1 cut(s) | 23 |
| BstV1I | GCAGC | 4 cut(s) | 586, 1142, 1555, 1614 |
| BstV2I | GAAGAC | 2 cut(s) | 45, 645 |
| BstX2I | RGATCY | 2 cut(s) | 559, 614 |
| BstYI | RGATCY | 2 cut(s) | 559, 614 |
| Bsu36I | CCTNAGG | 1 cut(s) | 45 |
| BsuI | GTATCC | 1 cut(s) | 391 |
| BsuRI | GGCC | 3 cut(s) | 74, 1441, 1500 |
| BtsCI | GGATG | 6 cut(s) | 75, 969, 1582, 1720, 2074, 2170 |
| BtsIMutI | CAGTG | 5 cut(s) | 397, 534, 1324, 1350, 1757 |
| Cac8I | GCNNGC | 5 cut(s) | 199, 642, 1160, 1170, 2118 |
| CfoI | GCGC | 3 cut(s) | 23, 345, 360 |
| Cfr13I | GGNCC | 3 cut(s) | 1010, 1097, 1864 |
| CseI | GACGC | 1 cut(s) | 12 |
| CviAII | CATG | 9 cut(s) | 183, 314, 371, 412, 605, 815, 1169, 1382, 1502 |
| DpnI | GATC | 6 cut(s) | 167, 561, 616, 997, 1581, 1593 |
| DpnII | GATC | 6 cut(s) | 165, 559, 614, 995, 1579, 1591 |
| DraI | TTTAAA | 1 cut(s) | 768 |
| Eam1104I | CTCTTC | 6 cut(s) | 1503, 1647, 1929, 2043, 2154, 2166 |
| EarI | CTCTTC | 6 cut(s) | 1503, 1647, 1929, 2043, 2154, 2166 |
| Ecl136II | GAGCTC | 1 cut(s) | 544 |
| Eco24I | GRGCYC | 1 cut(s) | 546 |
| Eco47I | GGWCC | 3 cut(s) | 1010, 1097, 1864 |
| Eco53kI | GAGCTC | 1 cut(s) | 544 |
| Eco57I | CTGAAG | 6 cut(s) | 18, 729, 838, 1602, 1928, 2175 |
| Eco72I | CACGTG | 1 cut(s) | 59 |
| Eco81I | CCTNAGG | 1 cut(s) | 45 |
| EcoICRI | GAGCTC | 1 cut(s) | 544 |
| EcoRII | CCWGG | 2 cut(s) | 69, 384 |
| EcoT38I | GRGCYC | 1 cut(s) | 546 |
| FaeI | CATG | 9 cut(s) | 186, 317, 374, 415, 608, 818, 1172, 1385, 1505 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 563, 595 |
| FaqI | GGGAC | 3 cut(s) | 47, 1061, 1253 |
| FatI | CATG | 9 cut(s) | 182, 313, 370, 411, 604, 814, 1168, 1381, 1501 |
| FbaI | TGATCA | 1 cut(s) | 165 |
| Fnu4HI | GCNGC | 5 cut(s) | 575, 837, 1156, 1569, 1603 |
| FokI | GGATG | 5 cut(s) | 62, 976, 1589, 1727, 2081 |
| FriOI | GRGCYC | 1 cut(s) | 546 |
| Fsp4HI | GCNGC | 5 cut(s) | 575, 837, 1156, 1569, 1603 |
| FspBI | CTAG | 3 cut(s) | 27, 840, 1331 |
| GlaI | GCGC | 3 cut(s) | 22, 344, 359 |
| GluI | GCNGC | 5 cut(s) | 575, 837, 1156, 1569, 1603 |
| GsuI | CTGGAG | 3 cut(s) | 53, 1604, 1818 |
| HaeIII | GGCC | 3 cut(s) | 74, 1441, 1500 |
| HapII | CCGG | 2 cut(s) | 330, 1388 |
| HgaI | GACGC | 1 cut(s) | 12 |
| HhaI | GCGC | 3 cut(s) | 23, 345, 360 |
| Hin1II | CATG | 9 cut(s) | 186, 317, 374, 415, 608, 818, 1172, 1385, 1505 |
| Hin6I | GCGC | 3 cut(s) | 21, 343, 358 |
| HinP1I | GCGC | 3 cut(s) | 21, 343, 358 |
| HpaII | CCGG | 2 cut(s) | 330, 1388 |
| HphI | GGTGA | 6 cut(s) | 88, 283, 289, 498, 1132, 1570 |
| Hpy166II | GTNNAC | 2 cut(s) | 8, 1753 |
| Hpy8I | GTNNAC | 2 cut(s) | 8, 1753 |
| Hpy99I | CGWCG | 1 cut(s) | 759 |
| HpyCH4III | ACNGT | 7 cut(s) | 295, 403, 495, 1021, 1319, 1793, 2025 |
| HpyCH4IV | ACGT | 4 cut(s) | 58, 176, 754, 1104 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 29, 335, 605, 1793 |
| HpySE526I | ACGT | 4 cut(s) | 58, 176, 754, 1104 |
| Hsp92II | CATG | 9 cut(s) | 186, 317, 374, 415, 608, 818, 1172, 1385, 1505 |
| HspAI | GCGC | 3 cut(s) | 21, 343, 358 |
| Ksp22I | TGATCA | 1 cut(s) | 165 |
| Kzo9I | GATC | 6 cut(s) | 165, 559, 614, 995, 1579, 1591 |
| LmnI | GCTCC | 3 cut(s) | 1327, 1534, 1799 |
| Lsp1109I | GCAGC | 4 cut(s) | 586, 1142, 1555, 1614 |
| LweI | GCATC | 3 cut(s) | 325, 2074, 2159 |
| MaeI | CTAG | 3 cut(s) | 27, 840, 1331 |
| MaeII | ACGT | 4 cut(s) | 58, 176, 754, 1104 |
| MaeIII | GTNAC | 5 cut(s) | 170, 295, 309, 797, 1138 |
| MalI | GATC | 6 cut(s) | 167, 561, 616, 997, 1581, 1593 |
| MboI | GATC | 6 cut(s) | 165, 559, 614, 995, 1579, 1591 |
| MfeI | CAATTG | 2 cut(s) | 303, 480 |
| MflI | RGATCY | 2 cut(s) | 559, 614 |
| MhlI | GDGCHC | 4 cut(s) | 10, 232, 536, 546 |
| MlyI | GAGTC | 4 cut(s) | 200, 317, 1423, 1985 |
| MmeI | TCCRAC | 1 cut(s) | 133 |
| MseI | TTAA | 4 cut(s) | 489, 767, 921, 1725 |
| MspI | CCGG | 2 cut(s) | 330, 1388 |
| MspR9I | CCNGG | 2 cut(s) | 71, 386 |
| MunI | CAATTG | 2 cut(s) | 303, 480 |
| Mva1269I | GAATGC | 1 cut(s) | 1519 |
| MvaI | CCWGG | 2 cut(s) | 71, 386 |
| MvnI | CGCG | 1 cut(s) | 23 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 29, 335, 605, 1793 |
| NdeII | GATC | 6 cut(s) | 165, 559, 614, 995, 1579, 1591 |
| NlaIII | CATG | 9 cut(s) | 186, 317, 374, 415, 608, 818, 1172, 1385, 1505 |
| NlaIV | GGNNCC | 3 cut(s) | 912, 1036, 1669 |
| NmuCI | GTSAC | 3 cut(s) | 295, 309, 1138 |
| NspI | RCATGY | 4 cut(s) | 415, 608, 1172, 1385 |
| PaeI | GCATGC | 1 cut(s) | 1172 |
| PciI | ACATGT | 1 cut(s) | 411 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 523 |
| PctI | GAATGC | 1 cut(s) | 1519 |
| PfeI | GAWTC | 6 cut(s) | 317, 935, 1217, 1637, 1643, 2093 |
| PkrI | GCNGC | 5 cut(s) | 576, 838, 1157, 1570, 1604 |
| PleI | GAGTC | 4 cut(s) | 199, 316, 1423, 1984 |
| PmaCI | CACGTG | 1 cut(s) | 59 |
| PmlI | CACGTG | 1 cut(s) | 59 |
| PpsI | GAGTC | 4 cut(s) | 199, 316, 1423, 1984 |
| Ppu21I | YACGTR | 1 cut(s) | 59 |
| PscI | ACATGT | 1 cut(s) | 411 |
| Psp124BI | GAGCTC | 1 cut(s) | 546 |
| Psp1406I | AACGTT | 1 cut(s) | 1104 |
| Psp6I | CCWGG | 2 cut(s) | 69, 384 |
| PspCI | CACGTG | 1 cut(s) | 59 |
| PspGI | CCWGG | 2 cut(s) | 69, 384 |
| PspN4I | GGNNCC | 3 cut(s) | 912, 1036, 1669 |
| PspPI | GGNCC | 3 cut(s) | 1010, 1097, 1864 |
| PstI | CTGCAG | 2 cut(s) | 1543, 1573 |
| PsuI | RGATCY | 2 cut(s) | 559, 614 |
| SacI | GAGCTC | 1 cut(s) | 546 |
| SaqAI | TTAA | 4 cut(s) | 489, 767, 921, 1725 |
| SatI | GCNGC | 5 cut(s) | 575, 837, 1156, 1569, 1603 |
| Sau3AI | GATC | 6 cut(s) | 165, 559, 614, 995, 1579, 1591 |
| Sau96I | GGNCC | 3 cut(s) | 1010, 1097, 1864 |
| SchI | GAGTC | 4 cut(s) | 200, 317, 1423, 1985 |
| ScrFI | CCNGG | 2 cut(s) | 71, 386 |
| SduI | GDGCHC | 4 cut(s) | 10, 232, 536, 546 |
| SfaNI | GCATC | 3 cut(s) | 325, 2074, 2159 |
| SfcI | CTRYAG | 3 cut(s) | 1173, 1539, 1569 |
| SinI | GGWCC | 3 cut(s) | 1010, 1097, 1864 |
| SmlI | CTYRAG | 1 cut(s) | 188 |
| SmoI | CTYRAG | 1 cut(s) | 188 |
| SphI | GCATGC | 1 cut(s) | 1172 |
| SsiI | CCGC | 2 cut(s) | 836, 1980 |
| SspI | AATATT | 2 cut(s) | 807, 1723 |
| SspMI | CTAG | 3 cut(s) | 27, 840, 1331 |
| SstI | GAGCTC | 1 cut(s) | 546 |
| StyD4I | CCNGG | 2 cut(s) | 69, 384 |
| TaaI | ACNGT | 7 cut(s) | 295, 403, 495, 1021, 1319, 1793, 2025 |
| TaiI | ACGT | 4 cut(s) | 61, 179, 757, 1107 |
| TaqI | TCGA | 7 cut(s) | 526, 693, 827, 970, 1280, 1397, 2004 |
| TauI | GCSGC | 1 cut(s) | 839 |
| TfiI | GAWTC | 6 cut(s) | 317, 935, 1217, 1637, 1643, 2093 |
| Tru1I | TTAA | 4 cut(s) | 489, 767, 921, 1725 |
| Tru9I | TTAA | 4 cut(s) | 489, 767, 921, 1725 |
| TscAI | CASTG | 5 cut(s) | 397, 541, 1324, 1357, 1764 |
| TseFI | GTSAC | 3 cut(s) | 295, 309, 1138 |
| TseI | GCWGC | 4 cut(s) | 574, 1155, 1568, 1602 |
| Tsp45I | GTSAC | 3 cut(s) | 295, 309, 1138 |
| TspRI | CASTG | 5 cut(s) | 397, 541, 1324, 1357, 1764 |
| VneI | GTGCAC | 1 cut(s) | 6 |
| VpaK11BI | GGWCC | 3 cut(s) | 1010, 1097, 1864 |
| XapI | RAATTY | 7 cut(s) | 104, 819, 1059, 1066, 1365, 1955, 2103 |
| XceI | RCATGY | 4 cut(s) | 415, 608, 1172, 1385 |
| XspI | CTAG | 3 cut(s) | 27, 840, 1331 |