TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 43 - 92 | 4.5e-15 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 396 |
| AccII | CGCG | 1 cut(s) | 44 |
| AciI | CCGC | 2 cut(s) | 81, 366 |
| AclWI | GGATC | 1 cut(s) | 178 |
| AcsI | RAATTY | 1 cut(s) | 24 |
| AcuI | CTGAAG | 1 cut(s) | 186 |
| AgsI | TTSAA | 4 cut(s) | 111, 177, 310, 352 |
| AjnI | CCWGG | 2 cut(s) | 127, 268 |
| AluBI | AGCT | 3 cut(s) | 19, 107, 190 |
| AluI | AGCT | 3 cut(s) | 19, 107, 190 |
| AlwI | GGATC | 1 cut(s) | 178 |
| ApoI | RAATTY | 1 cut(s) | 24 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 272, 304 |
| AspLEI | GCGC | 1 cut(s) | 397 |
| AsuHPI | GGTGA | 1 cut(s) | 335 |
| BciT130I | CCWGG | 2 cut(s) | 129, 270 |
| BglII | AGATCT | 1 cut(s) | 377 |
| Bme1390I | CCNGG | 2 cut(s) | 129, 270 |
| BmrFI | CCNGG | 2 cut(s) | 129, 270 |
| BmsI | GCATC | 2 cut(s) | 88, 406 |
| BpmI | CTGGAG | 2 cut(s) | 111, 180 |
| BsaAI | YACGTR | 1 cut(s) | 411 |
| BsaBI | GATNNNNATC | 1 cut(s) | 298 |
| Bse1I | ACTGG | 1 cut(s) | 73 |
| Bse8I | GATNNNNATC | 1 cut(s) | 298 |
| BseBI | CCWGG | 2 cut(s) | 129, 270 |
| BseGI | GGATG | 2 cut(s) | 16, 299 |
| BseJI | GATNNNNATC | 1 cut(s) | 298 |
| BseMII | CTCAG | 2 cut(s) | 34, 291 |
| BseNI | ACTGG | 1 cut(s) | 73 |
| Bsh1236I | CGCG | 1 cut(s) | 44 |
| BsmI | GAATGC | 1 cut(s) | 245 |
| Bsp143I | GATC | 2 cut(s) | 170, 377 |
| BspACI | CCGC | 2 cut(s) | 81, 366 |
| BspCNI | CTCAG | 2 cut(s) | 33, 290 |
| BspFNI | CGCG | 1 cut(s) | 44 |
| BspHI | TCATGA | 1 cut(s) | 85 |
| BspPI | GGATC | 1 cut(s) | 178 |
| BsrI | ACTGG | 1 cut(s) | 73 |
| BssMI | GATC | 2 cut(s) | 170, 377 |
| Bst2UI | CCWGG | 2 cut(s) | 129, 270 |
| BstBAI | YACGTR | 1 cut(s) | 411 |
| BstDEI | CTNAG | 2 cut(s) | 20, 277 |
| BstF5I | GGATG | 2 cut(s) | 16, 299 |
| BstFNI | CGCG | 1 cut(s) | 44 |
| BstHHI | GCGC | 1 cut(s) | 397 |
| BstKTI | GATC | 2 cut(s) | 173, 380 |
| BstMBI | GATC | 2 cut(s) | 170, 377 |
| BstNI | CCWGG | 2 cut(s) | 129, 270 |
| BstSCI | CCNGG | 2 cut(s) | 127, 268 |
| BstUI | CGCG | 1 cut(s) | 44 |
| BstX2I | RGATCY | 2 cut(s) | 170, 377 |
| BstYI | RGATCY | 2 cut(s) | 170, 377 |
| BtsCI | GGATG | 2 cut(s) | 16, 299 |
| CciI | TCATGA | 1 cut(s) | 85 |
| CfoI | GCGC | 1 cut(s) | 397 |
| CseI | GACGC | 1 cut(s) | 33 |
| CviAII | CATG | 1 cut(s) | 86 |
| CviJI | RGCY | 3 cut(s) | 19, 107, 190 |
| CviKI_1 | RGCY | 3 cut(s) | 19, 107, 190 |
| DdeI | CTNAG | 2 cut(s) | 20, 277 |
| DpnI | GATC | 2 cut(s) | 172, 379 |
| DpnII | GATC | 2 cut(s) | 170, 377 |
| Eco57I | CTGAAG | 1 cut(s) | 186 |
| EcoRII | CCWGG | 2 cut(s) | 127, 268 |
| FaeI | CATG | 1 cut(s) | 89 |
| FaiI | YATR | 4 cut(s) | 75, 87, 375, 402 |
| FatI | CATG | 1 cut(s) | 85 |
| FokI | GGATG | 2 cut(s) | 23, 306 |
| FspAI | RTGCGCAY | 1 cut(s) | 396 |
| FspI | TGCGCA | 1 cut(s) | 396 |
| GlaI | GCGC | 1 cut(s) | 396 |
| GsuI | CTGGAG | 2 cut(s) | 111, 180 |
| HgaI | GACGC | 1 cut(s) | 33 |
| HhaI | GCGC | 1 cut(s) | 397 |
| Hin1II | CATG | 1 cut(s) | 89 |
| Hin6I | GCGC | 1 cut(s) | 395 |
| HinP1I | GCGC | 1 cut(s) | 395 |
| HindIII | AAGCTT | 2 cut(s) | 105, 188 |
| HphI | GGTGA | 1 cut(s) | 335 |
| Hpy188I | TCNGA | 2 cut(s) | 23, 280 |
| Hpy188III | TCNNGA | 3 cut(s) | 86, 197, 381 |
| HpyAV | CCTTC | 1 cut(s) | 161 |
| HpyCH4IV | ACGT | 1 cut(s) | 410 |
| HpyCH4V | TGCA | 4 cut(s) | 14, 101, 245, 373 |
| HpyF3I | CTNAG | 2 cut(s) | 20, 277 |
| HpySE526I | ACGT | 1 cut(s) | 410 |
| Hsp92II | CATG | 1 cut(s) | 89 |
| HspAI | GCGC | 1 cut(s) | 395 |
| Kzo9I | GATC | 2 cut(s) | 170, 377 |
| LpnPI | CCDG | 7 cut(s) | 54, 114, 141, 210, 255, 282, 366 |
| LweI | GCATC | 2 cut(s) | 88, 406 |
| MaeII | ACGT | 1 cut(s) | 410 |
| MaeIII | GTNAC | 2 cut(s) | 272, 386 |
| MalI | GATC | 2 cut(s) | 172, 379 |
| MboI | GATC | 2 cut(s) | 170, 377 |
| MboII | GAAGA | 1 cut(s) | 165 |
| MflI | RGATCY | 2 cut(s) | 170, 377 |
| MluCI | AATT | 5 cut(s) | 24, 111, 117, 340, 355 |
| MnlI | CCTC | 1 cut(s) | 204 |
| MseI | TTAA | 2 cut(s) | 57, 339 |
| MspR9I | CCNGG | 2 cut(s) | 129, 270 |
| Mva1269I | GAATGC | 1 cut(s) | 245 |
| MvaI | CCWGG | 2 cut(s) | 129, 270 |
| MvnI | CGCG | 1 cut(s) | 44 |
| NdeII | GATC | 2 cut(s) | 170, 377 |
| NlaIII | CATG | 1 cut(s) | 89 |
| NmuCI | GTSAC | 1 cut(s) | 386 |
| NsbI | TGCGCA | 1 cut(s) | 396 |
| PagI | TCATGA | 1 cut(s) | 85 |
| PctI | GAATGC | 1 cut(s) | 245 |
| PfoI | TCCNGGA | 1 cut(s) | 127 |
| Ppu21I | YACGTR | 1 cut(s) | 411 |
| Psp6I | CCWGG | 2 cut(s) | 127, 268 |
| PspGI | CCWGG | 2 cut(s) | 127, 268 |
| PsuI | RGATCY | 2 cut(s) | 170, 377 |
| SaqAI | TTAA | 2 cut(s) | 57, 339 |
| Sau3AI | GATC | 2 cut(s) | 170, 377 |
| ScrFI | CCNGG | 2 cut(s) | 129, 270 |
| SetI | ASST | 5 cut(s) | 21, 57, 109, 192, 413 |
| SfaNI | GCATC | 2 cut(s) | 88, 406 |
| Sse9I | AATT | 5 cut(s) | 24, 111, 117, 340, 355 |
| SsiI | CCGC | 2 cut(s) | 81, 366 |
| StyD4I | CCNGG | 2 cut(s) | 127, 268 |
| TaiI | ACGT | 1 cut(s) | 413 |
| TaqI | TCGA | 1 cut(s) | 249 |
| TasI | AATT | 5 cut(s) | 24, 111, 117, 340, 355 |
| Tru1I | TTAA | 2 cut(s) | 57, 339 |
| Tru9I | TTAA | 2 cut(s) | 57, 339 |
| TseFI | GTSAC | 1 cut(s) | 386 |
| Tsp45I | GTSAC | 1 cut(s) | 386 |
| TspGWI | ACGGA | 1 cut(s) | 226 |
| XapI | RAATTY | 1 cut(s) | 24 |