TMV resistance protein N-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 992 |
| Acc36I | ACCTGC | 1 cut(s) | 193 |
| AccB1I | GGYRCC | 1 cut(s) | 1196 |
| AccII | CGCG | 1 cut(s) | 1518 |
| AciI | CCGC | 2 cut(s) | 88, 1516 |
| AclI | AACGTT | 1 cut(s) | 403 |
| AclWI | GGATC | 1 cut(s) | 868 |
| AcsI | RAATTY | 8 cut(s) | 763, 1041, 1259, 1425, 1465, 1731, 1799, 1879 |
| AcuI | CTGAAG | 2 cut(s) | 1064, 1877 |
| AdeI | CACNNNGTG | 1 cut(s) | 261 |
| AfaI | GTAC | 4 cut(s) | 354, 892, 900, 1014 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 857, 1951 |
| AflII | CTTAAG | 1 cut(s) | 431 |
| AflIII | ACRYGT | 1 cut(s) | 1632 |
| AjiI | CACGTC | 2 cut(s) | 919, 1635 |
| AjnI | CCWGG | 1 cut(s) | 1537 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 933, 965 |
| Alw21I | GWGCWC | 2 cut(s) | 1790, 1815 |
| Alw26I | GTCTC | 4 cut(s) | 1119, 1285, 1446, 1454 |
| AlwI | GGATC | 1 cut(s) | 868 |
| Ama87I | CYCGRG | 1 cut(s) | 999 |
| AoxI | GGCC | 4 cut(s) | 504, 577, 1501, 2018 |
| ApeKI | GCWGC | 7 cut(s) | 23, 26, 116, 458, 1212, 1489, 1845 |
| ApoI | RAATTY | 8 cut(s) | 763, 1041, 1259, 1425, 1465, 1731, 1799, 1879 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1275, 1332, 1735, 1914 |
| AspLEI | GCGC | 1 cut(s) | 1076 |
| AspS9I | GGNCC | 4 cut(s) | 577, 1501, 1968, 2018 |
| AsuC2I | CCSGG | 1 cut(s) | 496 |
| AsuHPI | GGTGA | 7 cut(s) | 30, 89, 91, 235, 701, 836, 1659 |
| AsuII | TTCGAA | 2 cut(s) | 127, 1729 |
| AvaI | CYCGRG | 1 cut(s) | 999 |
| AvaII | GGWCC | 1 cut(s) | 1968 |
| BanI | GGYRCC | 1 cut(s) | 1196 |
| BanII | GRGCYC | 1 cut(s) | 1815 |
| BauI | CACGAG | 1 cut(s) | 275 |
| BbsI | GAAGAC | 2 cut(s) | 1233, 1865 |
| Bbv12I | GWGCWC | 2 cut(s) | 1790, 1815 |
| BbvI | GCAGC | 7 cut(s) | 10, 13, 103, 445, 1199, 1476, 1832 |
| BccI | CCATC | 5 cut(s) | 299, 859, 1064, 1215, 1298 |
| BceAI | ACGGC | 1 cut(s) | 491 |
| BciT130I | CCWGG | 1 cut(s) | 1539 |
| BclI | TGATCA | 1 cut(s) | 225 |
| BcnI | CCSGG | 1 cut(s) | 496 |
| BcoDI | GTCTC | 4 cut(s) | 1119, 1285, 1446, 1454 |
| BfaI | CTAG | 5 cut(s) | 194, 581, 947, 1266, 1796 |
| BfoI | RGCGCY | 1 cut(s) | 1077 |
| BfrI | CTTAAG | 1 cut(s) | 431 |
| BfuAI | ACCTGC | 1 cut(s) | 193 |
| BglII | AGATCT | 1 cut(s) | 1750 |
| BisI | GCNGC | 7 cut(s) | 24, 27, 117, 459, 1213, 1490, 1846 |
| BlsI | GCNGC | 7 cut(s) | 25, 28, 118, 460, 1214, 1491, 1847 |
| Bme1390I | CCNGG | 2 cut(s) | 496, 1539 |
| Bme18I | GGWCC | 1 cut(s) | 1968 |
| BmeT110I | CYCGRG | 1 cut(s) | 999 |
| BmgBI | CACGTC | 2 cut(s) | 919, 1635 |
| BmgT120I | GGNCC | 4 cut(s) | 577, 1501, 1968, 2018 |
| BmiI | GGNNCC | 1 cut(s) | 1198 |
| BmrFI | CCNGG | 2 cut(s) | 496, 1539 |
| BmrI | ACTGGG | 3 cut(s) | 1240, 1811, 2025 |
| BmsI | GCATC | 5 cut(s) | 281, 370, 433, 1467, 1552 |
| BmuI | ACTGGG | 3 cut(s) | 1240, 1811, 2025 |
| BoxI | GACNNNNGTC | 2 cut(s) | 339, 1511 |
| BpiI | GAAGAC | 2 cut(s) | 1233, 1865 |
| BpmI | CTGGAG | 1 cut(s) | 1607 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1763 |
| Bpu14I | TTCGAA | 2 cut(s) | 127, 1729 |
| BpuEI | CTTGAG | 4 cut(s) | 182, 547, 983, 1774 |
| BpuMI | CCSGG | 1 cut(s) | 496 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1575 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 832, 862, 1797, 1827 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 857, 1951 |
| Bse1I | ACTGG | 3 cut(s) | 1235, 1817, 2020 |
| Bse3DI | GCAATG | 1 cut(s) | 1341 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1575 |
| BseBI | CCWGG | 1 cut(s) | 1539 |
| BseGI | GGATG | 8 cut(s) | 178, 274, 310, 355, 448, 1240, 1567, 1960 |
| BseJI | GATNNNNATC | 1 cut(s) | 1575 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 857, 1951 |
| BseMI | GCAATG | 1 cut(s) | 1341 |
| BseMII | CTCAG | 2 cut(s) | 898, 2045 |
| BseNI | ACTGG | 3 cut(s) | 1235, 1817, 2020 |
| BseXI | GCAGC | 7 cut(s) | 10, 13, 103, 445, 1199, 1476, 1832 |
| BsgI | GTGCAG | 1 cut(s) | 1831 |
| Bsh1236I | CGCG | 1 cut(s) | 1518 |
| BshFI | GGCC | 4 cut(s) | 506, 579, 1503, 2020 |
| BshNI | GGYRCC | 1 cut(s) | 1196 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1790, 1815 |
| BsiHKCI | CYCGRG | 1 cut(s) | 999 |
| BsiSI | CCGG | 2 cut(s) | 495, 1504 |
| BslFI | GGGAC | 1 cut(s) | 511 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 857, 1951 |
| BsmAI | GTCTC | 4 cut(s) | 1119, 1285, 1446, 1454 |
| BsmBI | CGTCTC | 1 cut(s) | 1454 |
| BsmFI | GGGAC | 1 cut(s) | 511 |
| BsmI | GAATGC | 2 cut(s) | 1170, 1334 |
| BsnI | GGCC | 4 cut(s) | 506, 579, 1503, 2020 |
| BsoBI | CYCGRG | 1 cut(s) | 999 |
| Bsp119I | TTCGAA | 2 cut(s) | 127, 1729 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1790, 1815 |
| Bsp143I | GATC | 6 cut(s) | 225, 860, 958, 1003, 1664, 1750 |
| BspACI | CCGC | 2 cut(s) | 88, 1516 |
| BspANI | GGCC | 4 cut(s) | 506, 579, 1503, 2020 |
| BspCNI | CTCAG | 2 cut(s) | 897, 2044 |
| BspFNI | CGCG | 1 cut(s) | 1518 |
| BspLI | GGNNCC | 1 cut(s) | 1198 |
| BspMI | ACCTGC | 1 cut(s) | 193 |
| BspPI | GGATC | 1 cut(s) | 868 |
| BspQI | GCTCTTC | 1 cut(s) | 1083 |
| BspT104I | TTCGAA | 2 cut(s) | 127, 1729 |
| BspT107I | GGYRCC | 1 cut(s) | 1196 |
| BspTI | CTTAAG | 1 cut(s) | 431 |
| BsrDI | GCAATG | 1 cut(s) | 1341 |
| BsrI | ACTGG | 3 cut(s) | 1235, 1817, 2020 |
| BssMI | GATC | 6 cut(s) | 225, 860, 958, 1003, 1664, 1750 |
| BssSI | CACGAG | 1 cut(s) | 275 |
| Bst2BI | CACGAG | 1 cut(s) | 275 |
| Bst2UI | CCWGG | 1 cut(s) | 1539 |
| Bst4CI | ACNGT | 7 cut(s) | 312, 416, 1126, 1612, 1650, 1864, 1992 |
| Bst6I | CTCTTC | 3 cut(s) | 19, 724, 1083 |
| BstAFI | CTTAAG | 1 cut(s) | 431 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1486 |
| BstBI | TTCGAA | 2 cut(s) | 127, 1729 |
| BstC8I | GCNNGC | 2 cut(s) | 1098, 1348 |
| BstDEI | CTNAG | 6 cut(s) | 65, 884, 1295, 1471, 1763, 2031 |
| BstF5I | GGATG | 8 cut(s) | 178, 274, 310, 355, 448, 1240, 1567, 1960 |
| BstFNI | CGCG | 1 cut(s) | 1518 |
| BstH2I | RGCGCY | 1 cut(s) | 1077 |
| BstHHI | GCGC | 1 cut(s) | 1076 |
| BstKTI | GATC | 6 cut(s) | 228, 863, 961, 1006, 1667, 1753 |
| BstMAI | GTCTC | 4 cut(s) | 1119, 1285, 1446, 1454 |
| BstMBI | GATC | 6 cut(s) | 225, 860, 958, 1003, 1664, 1750 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 1486, 1524, 1768, 1819 |
| BstNI | CCWGG | 1 cut(s) | 1539 |
| BstNSI | RCATGY | 2 cut(s) | 1100, 1350 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 339, 1511 |
| BstSCI | CCNGG | 2 cut(s) | 494, 1537 |
| BstUI | CGCG | 1 cut(s) | 1518 |
| BstV1I | GCAGC | 7 cut(s) | 10, 13, 103, 445, 1199, 1476, 1832 |
| BstV2I | GAAGAC | 2 cut(s) | 1233, 1865 |
| BstX2I | RGATCY | 1 cut(s) | 1750 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1978 |
| BstYI | RGATCY | 1 cut(s) | 1750 |
| BsuRI | GGCC | 4 cut(s) | 506, 579, 1503, 2020 |
| BtgZI | GCGATG | 1 cut(s) | 1193 |
| BtrI | CACGTC | 2 cut(s) | 919, 1635 |
| BtsCI | GGATG | 8 cut(s) | 178, 274, 310, 355, 448, 1240, 1567, 1960 |
| BtsIMutI | CAGTG | 2 cut(s) | 1824, 1853 |
| BveI | ACCTGC | 1 cut(s) | 193 |
| Cac8I | GCNNGC | 2 cut(s) | 1098, 1348 |
| CfoI | GCGC | 1 cut(s) | 1076 |
| Cfr13I | GGNCC | 4 cut(s) | 577, 1501, 1968, 2018 |
| CseI | GACGC | 1 cut(s) | 854 |
| Csp6I | GTAC | 4 cut(s) | 353, 891, 899, 1013 |
| CviAII | CATG | 7 cut(s) | 113, 258, 667, 1067, 1097, 1347, 1481 |
| CviQI | GTAC | 4 cut(s) | 353, 891, 899, 1013 |
| DdeI | CTNAG | 6 cut(s) | 65, 884, 1295, 1471, 1763, 2031 |
| DpnI | GATC | 6 cut(s) | 227, 862, 960, 1005, 1666, 1752 |
| DpnII | GATC | 6 cut(s) | 225, 860, 958, 1003, 1664, 1750 |
| DraI | TTTAAA | 2 cut(s) | 573, 1747 |
| DraIII | CACNNNGTG | 1 cut(s) | 261 |
| Eam1104I | CTCTTC | 3 cut(s) | 19, 724, 1083 |
| EarI | CTCTTC | 3 cut(s) | 19, 724, 1083 |
| Ecl136II | GAGCTC | 1 cut(s) | 1813 |
| Eco24I | GRGCYC | 1 cut(s) | 1815 |
| Eco47I | GGWCC | 1 cut(s) | 1968 |
| Eco53kI | GAGCTC | 1 cut(s) | 1813 |
| Eco57I | CTGAAG | 2 cut(s) | 1064, 1877 |
| Eco88I | CYCGRG | 1 cut(s) | 999 |
| EcoICRI | GAGCTC | 1 cut(s) | 1813 |
| EcoO109I | RGGNCCY | 1 cut(s) | 577 |
| EcoRI | GAATTC | 2 cut(s) | 1731, 1799 |
| EcoRII | CCWGG | 1 cut(s) | 1537 |
| EcoT22I | ATGCAT | 3 cut(s) | 385, 1482, 1622 |
| EcoT38I | GRGCYC | 1 cut(s) | 1815 |
| Esp3I | CGTCTC | 1 cut(s) | 1454 |
| FaeI | CATG | 7 cut(s) | 116, 261, 670, 1070, 1100, 1350, 1484 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1316, 1348 |
| FaqI | GGGAC | 1 cut(s) | 511 |
| FatI | CATG | 7 cut(s) | 112, 257, 666, 1066, 1096, 1346, 1480 |
| FauI | CCCGC | 1 cut(s) | 95 |
| FauNDI | CATATG | 1 cut(s) | 385 |
| FbaI | TGATCA | 1 cut(s) | 225 |
| Fnu4HI | GCNGC | 7 cut(s) | 24, 27, 117, 459, 1213, 1490, 1846 |
| FokI | GGATG | 8 cut(s) | 185, 281, 317, 362, 455, 1247, 1574, 1967 |
| FriOI | GRGCYC | 1 cut(s) | 1815 |
| Fsp4HI | GCNGC | 7 cut(s) | 24, 27, 117, 459, 1213, 1490, 1846 |
| FspBI | CTAG | 5 cut(s) | 194, 581, 947, 1266, 1796 |
| GlaI | GCGC | 1 cut(s) | 1075 |
| GluI | GCNGC | 7 cut(s) | 24, 27, 117, 459, 1213, 1490, 1846 |
| GsuI | CTGGAG | 1 cut(s) | 1607 |
| HaeII | RGCGCY | 1 cut(s) | 1077 |
| HaeIII | GGCC | 4 cut(s) | 506, 579, 1503, 2020 |
| HapII | CCGG | 2 cut(s) | 495, 1504 |
| HgaI | GACGC | 1 cut(s) | 854 |
| HhaI | GCGC | 1 cut(s) | 1076 |
| Hin1II | CATG | 7 cut(s) | 116, 261, 670, 1070, 1100, 1350, 1484 |
| Hin6I | GCGC | 1 cut(s) | 1074 |
| HinP1I | GCGC | 1 cut(s) | 1074 |
| HindIII | AAGCTT | 5 cut(s) | 215, 392, 732, 1760, 1893 |
| HinfI | GANTC | 6 cut(s) | 614, 714, 926, 984, 1419, 1774 |
| HpaII | CCGG | 2 cut(s) | 495, 1504 |
| HphI | GGTGA | 7 cut(s) | 30, 89, 91, 235, 701, 836, 1659 |
| Hpy166II | GTNNAC | 1 cut(s) | 344 |
| Hpy8I | GTNNAC | 1 cut(s) | 344 |
| HpyAV | CCTTC | 8 cut(s) | 119, 200, 638, 764, 1318, 1408, 1681, 1746 |
| HpyCH4III | ACNGT | 7 cut(s) | 312, 416, 1126, 1612, 1650, 1864, 1992 |
| HpyCH4IV | ACGT | 4 cut(s) | 403, 918, 1546, 1634 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 1486, 1524, 1768, 1819 |
| HpyF3I | CTNAG | 6 cut(s) | 65, 884, 1295, 1471, 1763, 2031 |
| HpySE526I | ACGT | 4 cut(s) | 403, 918, 1546, 1634 |
| Hsp92II | CATG | 7 cut(s) | 116, 261, 670, 1070, 1100, 1350, 1484 |
| HspAI | GCGC | 1 cut(s) | 1074 |
| Ksp22I | TGATCA | 1 cut(s) | 225 |
| Kzo9I | GATC | 6 cut(s) | 225, 860, 958, 1003, 1664, 1750 |
| LguI | GCTCTTC | 1 cut(s) | 1083 |
| LmnI | GCTCC | 3 cut(s) | 853, 1008, 1818 |
| Lsp1109I | GCAGC | 7 cut(s) | 10, 13, 103, 445, 1199, 1476, 1832 |
| LweI | GCATC | 5 cut(s) | 281, 370, 433, 1467, 1552 |
| MaeI | CTAG | 5 cut(s) | 194, 581, 947, 1266, 1796 |
| MaeII | ACGT | 4 cut(s) | 403, 918, 1546, 1634 |
| MaeIII | GTNAC | 2 cut(s) | 36, 618 |
| MalI | GATC | 6 cut(s) | 227, 862, 960, 1005, 1666, 1752 |
| MboI | GATC | 6 cut(s) | 225, 860, 958, 1003, 1664, 1750 |
| MfeI | CAATTG | 2 cut(s) | 1241, 1509 |
| MflI | RGATCY | 1 cut(s) | 1750 |
| MhlI | GDGCHC | 2 cut(s) | 1790, 1815 |
| MlyI | GAGTC | 1 cut(s) | 708 |
| MmeI | TCCRAC | 3 cut(s) | 931, 955, 1632 |
| Mph1103I | ATGCAT | 3 cut(s) | 385, 1482, 1622 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1275, 1332, 1735, 1914 |
| MseI | TTAA | 9 cut(s) | 432, 572, 747, 873, 1185, 1691, 1746, 1929, 1994 |
| MslI | CAYNNNNRTG | 3 cut(s) | 111, 1095, 2105 |
| MspCI | CTTAAG | 1 cut(s) | 431 |
| MspI | CCGG | 2 cut(s) | 495, 1504 |
| MspR9I | CCNGG | 2 cut(s) | 496, 1539 |
| MunI | CAATTG | 2 cut(s) | 1241, 1509 |
| Mva1269I | GAATGC | 2 cut(s) | 1170, 1334 |
| MvaI | CCWGG | 1 cut(s) | 1539 |
| MvnI | CGCG | 1 cut(s) | 1518 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 1486, 1524, 1768, 1819 |
| NciI | CCSGG | 1 cut(s) | 496 |
| NdeI | CATATG | 1 cut(s) | 385 |
| NdeII | GATC | 6 cut(s) | 225, 860, 958, 1003, 1664, 1750 |
| NlaIII | CATG | 7 cut(s) | 116, 261, 670, 1070, 1100, 1350, 1484 |
| NlaIV | GGNNCC | 1 cut(s) | 1198 |
| NmuCI | GTSAC | 1 cut(s) | 36 |
| NsiI | ATGCAT | 3 cut(s) | 385, 1482, 1622 |
| NspI | RCATGY | 2 cut(s) | 1100, 1350 |
| NspV | TTCGAA | 2 cut(s) | 127, 1729 |
| PaeI | GCATGC | 2 cut(s) | 1100, 1350 |
| PaeR7I | CTCGAG | 1 cut(s) | 999 |
| PciSI | GCTCTTC | 1 cut(s) | 1083 |
| PctI | GAATGC | 2 cut(s) | 1170, 1334 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1275, 1332, 1735, 1914 |
| PfeI | GAWTC | 5 cut(s) | 614, 926, 984, 1419, 1774 |
| PkrI | GCNGC | 7 cut(s) | 25, 28, 118, 460, 1214, 1491, 1847 |
| PleI | GAGTC | 1 cut(s) | 708 |
| PpsI | GAGTC | 1 cut(s) | 708 |
| PshAI | GACNNNNGTC | 2 cut(s) | 339, 1511 |
| PsiI | TTATAA | 1 cut(s) | 992 |
| Psp124BI | GAGCTC | 1 cut(s) | 1815 |
| Psp1406I | AACGTT | 1 cut(s) | 403 |
| Psp6I | CCWGG | 1 cut(s) | 1537 |
| PspGI | CCWGG | 1 cut(s) | 1537 |
| PspN4I | GGNNCC | 1 cut(s) | 1198 |
| PspPI | GGNCC | 4 cut(s) | 577, 1501, 1968, 2018 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 891, 923 |
| PsuI | RGATCY | 1 cut(s) | 1750 |
| RsaI | GTAC | 4 cut(s) | 354, 892, 900, 1014 |
| RsaNI | GTAC | 4 cut(s) | 353, 891, 899, 1013 |
| RseI | CAYNNNNRTG | 3 cut(s) | 111, 1095, 2105 |
| SacI | GAGCTC | 1 cut(s) | 1815 |
| SapI | GCTCTTC | 1 cut(s) | 1083 |
| SaqAI | TTAA | 9 cut(s) | 432, 572, 747, 873, 1185, 1691, 1746, 1929, 1994 |
| SatI | GCNGC | 7 cut(s) | 24, 27, 117, 459, 1213, 1490, 1846 |
| Sau3AI | GATC | 6 cut(s) | 225, 860, 958, 1003, 1664, 1750 |
| Sau96I | GGNCC | 4 cut(s) | 577, 1501, 1968, 2018 |
| SchI | GAGTC | 1 cut(s) | 708 |
| ScrFI | CCNGG | 2 cut(s) | 496, 1539 |
| SduI | GDGCHC | 2 cut(s) | 1790, 1815 |
| SfaNI | GCATC | 5 cut(s) | 281, 370, 433, 1467, 1552 |
| Sfr274I | CTCGAG | 1 cut(s) | 999 |
| SfuI | TTCGAA | 2 cut(s) | 127, 1729 |
| SinI | GGWCC | 1 cut(s) | 1968 |
| SlaI | CTCGAG | 1 cut(s) | 999 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 111, 1095, 2105 |
| SmlI | CTYRAG | 6 cut(s) | 161, 431, 562, 962, 999, 1789 |
| SmoI | CTYRAG | 6 cut(s) | 161, 431, 562, 962, 999, 1789 |
| SphI | GCATGC | 2 cut(s) | 1100, 1350 |
| SsiI | CCGC | 2 cut(s) | 88, 1516 |
| SspI | AATATT | 2 cut(s) | 1276, 1389 |
| SspMI | CTAG | 5 cut(s) | 194, 581, 947, 1266, 1796 |
| SstI | GAGCTC | 1 cut(s) | 1815 |
| StyD4I | CCNGG | 2 cut(s) | 494, 1537 |
| TaaI | ACNGT | 7 cut(s) | 312, 416, 1126, 1612, 1650, 1864, 1992 |
| TaiI | ACGT | 4 cut(s) | 406, 921, 1549, 1637 |
| TaqI | TCGA | 7 cut(s) | 43, 127, 1000, 1017, 1663, 1729, 1918 |
| TfiI | GAWTC | 5 cut(s) | 614, 926, 984, 1419, 1774 |
| Tru1I | TTAA | 9 cut(s) | 432, 572, 747, 873, 1185, 1691, 1746, 1929, 1994 |
| Tru9I | TTAA | 9 cut(s) | 432, 572, 747, 873, 1185, 1691, 1746, 1929, 1994 |
| TscAI | CASTG | 2 cut(s) | 1824, 1860 |
| TseFI | GTSAC | 1 cut(s) | 36 |
| TseI | GCWGC | 7 cut(s) | 23, 26, 116, 458, 1212, 1489, 1845 |
| Tsp45I | GTSAC | 1 cut(s) | 36 |
| TspGWI | ACGGA | 1 cut(s) | 795 |
| TspRI | CASTG | 2 cut(s) | 1824, 1860 |
| Vha464I | CTTAAG | 1 cut(s) | 431 |
| VpaK11BI | GGWCC | 1 cut(s) | 1968 |
| XapI | RAATTY | 8 cut(s) | 763, 1041, 1259, 1425, 1465, 1731, 1799, 1879 |
| XbaI | TCTAGA | 2 cut(s) | 193, 1795 |
| XceI | RCATGY | 2 cut(s) | 1100, 1350 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 262 |
| XhoI | CTCGAG | 1 cut(s) | 999 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1275, 1332, 1735, 1914 |
| XspI | CTAG | 5 cut(s) | 194, 581, 947, 1266, 1796 |
| Zsp2I | ATGCAT | 3 cut(s) | 385, 1482, 1622 |