pycom05g14130

Toll - interleukin 1 - resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
17677713 .. 17679203
1491 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g14130.1

Sequence Viewer

Length: 1350 bp
ATGGTTATACCCGTATTCTACCACATCAATCCATCTGATGTACGAAAACAGCACGGGAGTTATGCGGCTGCATTTGCTCAACTTGAAAAACGTTTCGACAACAGTATCGACAAGGTGCACAAGTGGAGGGATGCTTTGACGACTGCAGCCAATTTATCTGGGTTTGATTATTCAAACAAATCCGGGACGGAGACGGAGGCAAATCTAATTCAGAAAGTTGTCAATCGTATTTTGGCCAAAATGTGTCGTGAATCATCTTGCGATTTAAAGGGTTTTGTTGGAATTGAAAGCCGCATCAAGCAGATTGAATCGCTGTTAGGCATTCATTTACCGGATGCTTGCATCACTGTAGGTATTTGGGGCATGGGTGGTATTGGCAAGACCACCCTTGCCGAGGCTATATTTCTCAGACACTCTTTTAAATCCAAAGCTCCTTGTTTTCTTAAGAATGTTAGGGAGAACTCAGAACAAGCAGGTGGACTAGATCACTTGGAAAAAACACTTTTTGAGGAGATATTAAAGGAAGAAGTTTCTTTGCCCGTAAAATCAACTTTTCAAGAAAGGCTCAATCGTACAAAGGTCCTCATTGTTCTAGATGACATGAGTGATTCATTGCAAATGGATCGTTTAGCTGGCGATCATCTCCGGTATGGCAGTGGAAGTAGAATCATTATCACAAGTAGAGATAGGGGCAAACTTGGGCTAACTGGTGAAGAGGCTAAGATCTACAAGGTTGAGGGATTAAAATCGGATGACGCTCTTCAGCTCTTCTGTTTGCGTGCTTTCAAGAATAACGGTGCTTGTGCTTTCAAGAATAACGGTGCTTGTAGAACAGATTTTAAGGAGTTGGCAAAAAAGGTGGTTGCTTATGCTGGACGCGTTCCTTTGGCTCTTACAGTTTTGGGGTCCTTGTTCTTCAATTGTAAGAGCAAAGAAGAATGGGAAGATGAATTCAACAAATTGAAACGATTTCCCATTGAAGATATCCAGAAAGTGTTGAGAATAAGTTATGATAAATTGGGAGACAATGAGAAGGATATATTTCTGGATATAGCATGTTTTCATAAAGGGAAGTATGTGGTTGAGGTAAAACGAATGTTAGATGTTCGTGGATTCTTTGCGACATCTGGAATTAGAATTCTCATTGAGATGTCTCTCATATCAATTGATTCAAAAGGGAGAATGGAAACCATAGAGATGCACGATTTGCTACAAGAAATGGGAAGGAAAATTGCTCAAGAACAGAGTAGGTTGTTCAATGATGAGGATGTCCATCGTGTATTGAGAAGTAGGTTGTATTTGTGTTATATTTCAAAATTGCCACTGGTCCCAATGAGCCCGGCCCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

450

Amino Acids

50.83

Weight (kDa)

8.82

Isoelectric Point (pI)

49.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 1 - 94 3.4e-14 TIR domain
NB-ARC PF00931 116 - 265 3.2e-16 NB-ARC domain
WHD_ROQ1 PF23282 343 - 416 6.3e-18 Disease resistance protein Roq1-like, winged-helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 464
Acc36I ACCTGC 1 cut(s) 464
AccII CGCG 1 cut(s) 879
AciI CCGC 2 cut(s) 65, 292
AclI AACGTT 1 cut(s) 91
AclWI GGATC 1 cut(s) 630
AcoI YGGCCR 1 cut(s) 234
AcsI RAATTY 2 cut(s) 950, 1137
AcuI CTGAAG 1 cut(s) 746
AfaI GTAC 2 cut(s) 42, 574
AfiI CCNNNNNNNGG 1 cut(s) 394
AflII CTTAAG 1 cut(s) 443
AflIII ACRYGT 1 cut(s) 877
AluBI AGCT 3 cut(s) 431, 632, 766
AluI AGCT 3 cut(s) 431, 632, 766
Alw21I GWGCWC 1 cut(s) 120
Alw26I GTCTC 3 cut(s) 185, 1017, 1158
Alw44I GTGCAC 1 cut(s) 116
AlwI GGATC 1 cut(s) 630
AoxI GGCC 2 cut(s) 234, 1341
ApaLI GTGCAC 1 cut(s) 116
ApeKI GCWGC 2 cut(s) 68, 146
ApoI RAATTY 2 cut(s) 950, 1137
AspS9I GGNCC 4 cut(s) 580, 906, 1327, 1342
AsuC2I CCSGG 2 cut(s) 184, 1340
AsuHPI GGTGA 1 cut(s) 722
AvaII GGWCC 3 cut(s) 580, 906, 1327
BaeGI GKGCMC 1 cut(s) 120
BaeI ACNNNNGTAYC 2 cut(s) 88, 121
BalI TGGCCA 1 cut(s) 236
BanII GRGCYC 1 cut(s) 1340
Bbv12I GWGCWC 1 cut(s) 120
BbvI GCAGC 2 cut(s) 55, 158
BccI CCATC 2 cut(s) 40, 1281
BcgI CGANNNNNNTGC 2 cut(s) 605, 639
BcnI CCSGG 2 cut(s) 184, 1340
BcoDI GTCTC 3 cut(s) 185, 1017, 1158
BfaI CTAG 2 cut(s) 482, 593
BfmI CTRYAG 2 cut(s) 144, 348
BfrI CTTAAG 1 cut(s) 443
BfuAI ACCTGC 1 cut(s) 464
BglII AGATCT 1 cut(s) 723
BisI GCNGC 4 cut(s) 66, 69, 147, 292
BlsI GCNGC 4 cut(s) 67, 70, 148, 293
Bme1390I CCNGG 2 cut(s) 184, 1340
Bme18I GGWCC 3 cut(s) 580, 906, 1327
BmgT120I GGNCC 4 cut(s) 580, 906, 1327, 1342
BmiI GGNNCC 2 cut(s) 907, 1329
BmrFI CCNGG 2 cut(s) 184, 1340
BmsI GCATC 5 cut(s) 121, 303, 325, 351, 1188
BpuEI CTTGAG 1 cut(s) 1221
BpuMI CCSGG 2 cut(s) 184, 1340
BsaBI GATNNNNATC 2 cut(s) 745, 1272
BsaJI CCNNGG 1 cut(s) 393
BsaWI WCCGGW 2 cut(s) 331, 645
Bsc4I CCNNNNNNNGG 1 cut(s) 394
Bse1I ACTGG 2 cut(s) 712, 1329
Bse3DI GCAATG 1 cut(s) 611
Bse8I GATNNNNATC 2 cut(s) 745, 1272
BseDI CCNNGG 1 cut(s) 393
BseGI GGATG 4 cut(s) 136, 340, 757, 1273
BseJI GATNNNNATC 2 cut(s) 745, 1272
BseLI CCNNNNNNNGG 1 cut(s) 394
BseMI GCAATG 1 cut(s) 611
BseMII CTCAG 2 cut(s) 421, 477
BseNI ACTGG 2 cut(s) 712, 1329
BseRI GAGGAG 1 cut(s) 524
BseSI GKGCMC 1 cut(s) 120
BseXI GCAGC 2 cut(s) 55, 158
Bsh1236I CGCG 1 cut(s) 879
BshFI GGCC 2 cut(s) 236, 1343
BsiHKAI GWGCWC 1 cut(s) 120
BsiSI CCGG 4 cut(s) 183, 332, 646, 1340
BslFI GGGAC 2 cut(s) 199, 1313
BslI CCNNNNNNNGG 1 cut(s) 394
BsmAI GTCTC 3 cut(s) 185, 1017, 1158
BsmBI CGTCTC 1 cut(s) 185
BsmFI GGGAC 2 cut(s) 199, 1313
BsmI GAATGC 1 cut(s) 321
BsnI GGCC 2 cut(s) 236, 1343
Bsp1286I GDGCHC 2 cut(s) 120, 1340
Bsp143I GATC 4 cut(s) 484, 622, 637, 723
BspACI CCGC 2 cut(s) 65, 292
BspANI GGCC 2 cut(s) 236, 1343
BspCNI CTCAG 2 cut(s) 420, 476
BspFNI CGCG 1 cut(s) 879
BspLI GGNNCC 2 cut(s) 907, 1329
BspMAI CTGCAG 1 cut(s) 148
BspMI ACCTGC 1 cut(s) 464
BspPI GGATC 1 cut(s) 630
BspQI GCTCTTC 2 cut(s) 765, 773
BspTI CTTAAG 1 cut(s) 443
BsrDI GCAATG 1 cut(s) 611
BsrI ACTGG 2 cut(s) 712, 1329
BssECI CCNNGG 1 cut(s) 393
BssMI GATC 4 cut(s) 484, 622, 637, 723
Bst4CI ACNGT 5 cut(s) 104, 349, 797, 821, 898
Bst6I CTCTTC 3 cut(s) 708, 765, 773
BstAFI CTTAAG 1 cut(s) 443
BstAPI GCANNNNNTGC 1 cut(s) 1207
BstC8I GCNNGC 3 cut(s) 340, 634, 780
BstDEI CTNAG 3 cut(s) 407, 463, 720
BstENI CCTNNNNNAGG 1 cut(s) 392
BstF5I GGATG 4 cut(s) 136, 340, 757, 1273
BstFNI CGCG 1 cut(s) 879
BstKTI GATC 4 cut(s) 487, 625, 640, 726
BstMAI GTCTC 3 cut(s) 185, 1017, 1158
BstMBI GATC 4 cut(s) 484, 622, 637, 723
BstMWI GCNNNNNNNGC 2 cut(s) 74, 1207
BstNSI RCATGY 1 cut(s) 1059
BstSCI CCNGG 2 cut(s) 182, 1338
BstSFI CTRYAG 2 cut(s) 144, 348
BstSLI GKGCMC 1 cut(s) 120
BstUI CGCG 1 cut(s) 879
BstV1I GCAGC 2 cut(s) 55, 158
BstX2I RGATCY 1 cut(s) 723
BstYI RGATCY 1 cut(s) 723
BsuRI GGCC 2 cut(s) 236, 1343
BtsCI GGATG 4 cut(s) 136, 340, 757, 1273
BtsI GCAGTG 1 cut(s) 661
BtsIMutI CAGTG 3 cut(s) 345, 661, 1322
BveI ACCTGC 1 cut(s) 464
Cac8I GCNNGC 3 cut(s) 340, 634, 780
Cfr13I GGNCC 4 cut(s) 580, 906, 1327, 1342
CseI GACGC 2 cut(s) 764, 885
Csp6I GTAC 2 cut(s) 41, 573
CspCI CAANNNNNGTGG 2 cut(s) 840, 875
CviAII CATG 3 cut(s) 364, 601, 1056
CviQI GTAC 2 cut(s) 41, 573
DdeI CTNAG 3 cut(s) 407, 463, 720
DpnI GATC 4 cut(s) 486, 624, 639, 725
DpnII GATC 4 cut(s) 484, 622, 637, 723
DraI TTTAAA 2 cut(s) 267, 421
EaeI YGGCCR 1 cut(s) 234
Eam1104I CTCTTC 3 cut(s) 708, 765, 773
EarI CTCTTC 3 cut(s) 708, 765, 773
Eco24I GRGCYC 1 cut(s) 1340
Eco32I GATATC 1 cut(s) 985
Eco47I GGWCC 3 cut(s) 580, 906, 1327
Eco57I CTGAAG 1 cut(s) 746
EcoNI CCTNNNNNAGG 1 cut(s) 392
EcoO109I RGGNCCY 2 cut(s) 580, 906
EcoRI GAATTC 2 cut(s) 950, 1137
EcoRV GATATC 1 cut(s) 985
EcoT38I GRGCYC 1 cut(s) 1340
Esp3I CGTCTC 1 cut(s) 185
FaeI CATG 3 cut(s) 367, 604, 1059
FaqI GGGAC 2 cut(s) 199, 1313
FatI CATG 3 cut(s) 363, 600, 1055
Fnu4HI GCNGC 4 cut(s) 66, 69, 147, 292
FokI GGATG 4 cut(s) 143, 347, 764, 1280
FriOI GRGCYC 1 cut(s) 1340
Fsp4HI GCNGC 4 cut(s) 66, 69, 147, 292
FspBI CTAG 2 cut(s) 482, 593
GluI GCNGC 4 cut(s) 66, 69, 147, 292
HaeIII GGCC 2 cut(s) 236, 1343
HapII CCGG 4 cut(s) 183, 332, 646, 1340
HgaI GACGC 2 cut(s) 764, 885
Hin1II CATG 3 cut(s) 367, 604, 1059
HinfI GANTC 6 cut(s) 251, 308, 608, 666, 1113, 1169
HpaII CCGG 4 cut(s) 183, 332, 646, 1340
HphI GGTGA 1 cut(s) 722
Hpy166II GTNNAC 2 cut(s) 118, 479
Hpy188I TCNGA 5 cut(s) 37, 213, 410, 466, 751
Hpy188III TCNNGA 9 cut(s) 248, 557, 593, 787, 811, 988, 1046, 1128, 1238
Hpy8I GTNNAC 2 cut(s) 118, 479
HpyAV CCTTC 2 cut(s) 1027, 1218
HpyCH4III ACNGT 5 cut(s) 104, 349, 797, 821, 898
HpyCH4IV ACGT 1 cut(s) 91
HpyCH4V TGCA 6 cut(s) 71, 118, 146, 342, 616, 1201
HpyF10VI GCNNNNNNNGC 2 cut(s) 74, 1207
HpyF3I CTNAG 3 cut(s) 407, 463, 720
HpySE526I ACGT 1 cut(s) 91
Hsp92II CATG 3 cut(s) 367, 604, 1059
Kzo9I GATC 4 cut(s) 484, 622, 637, 723
LguI GCTCTTC 2 cut(s) 765, 773
LmnI GCTCC 1 cut(s) 436
Lsp1109I GCAGC 2 cut(s) 55, 158
LweI GCATC 5 cut(s) 121, 303, 325, 351, 1188
MaeI CTAG 2 cut(s) 482, 593
MaeII ACGT 1 cut(s) 91
MalI GATC 4 cut(s) 486, 624, 639, 725
MboI GATC 4 cut(s) 484, 622, 637, 723
MboII GAAGA 8 cut(s) 536, 725, 752, 760, 907, 947, 956, 992
MfeI CAATTG 2 cut(s) 919, 1164
MflI RGATCY 1 cut(s) 723
MhlI GDGCHC 2 cut(s) 120, 1340
MlsI TGGCCA 1 cut(s) 236
MluI ACGCGT 1 cut(s) 877
MluNI TGGCCA 1 cut(s) 236
MmeI TCCRAC 1 cut(s) 259
MnlI CCTC 9 cut(s) 120, 190, 388, 502, 593, 709, 730, 1078, 1258
Mox20I TGGCCA 1 cut(s) 236
MscI TGGCCA 1 cut(s) 236
MseI TTAA 6 cut(s) 266, 420, 444, 518, 743, 840
MslI CAYNNNNRTG 2 cut(s) 1148, 1196
Msp20I TGGCCA 1 cut(s) 236
MspCI CTTAAG 1 cut(s) 443
MspI CCGG 4 cut(s) 183, 332, 646, 1340
MspR9I CCNGG 2 cut(s) 184, 1340
MunI CAATTG 2 cut(s) 919, 1164
Mva1269I GAATGC 1 cut(s) 321
MvnI CGCG 1 cut(s) 879
MwoI GCNNNNNNNGC 2 cut(s) 74, 1207
NciI CCSGG 2 cut(s) 184, 1340
NdeII GATC 4 cut(s) 484, 622, 637, 723
NlaIII CATG 3 cut(s) 367, 604, 1059
NlaIV GGNNCC 2 cut(s) 907, 1329
NmeAIII GCCGAG 1 cut(s) 418
NspI RCATGY 1 cut(s) 1059
PaqCI CACCTGC 1 cut(s) 464
PciSI GCTCTTC 2 cut(s) 765, 773
PctI GAATGC 1 cut(s) 321
PfeI GAWTC 6 cut(s) 251, 308, 608, 666, 1113, 1169
PfoI TCCNGGA 1 cut(s) 182
PkrI GCNGC 4 cut(s) 67, 70, 148, 293
PpuMI RGGWCCY 2 cut(s) 580, 906
Psp1406I AACGTT 1 cut(s) 91
Psp5II RGGWCCY 2 cut(s) 580, 906
PspN4I GGNNCC 2 cut(s) 907, 1329
PspPI GGNCC 4 cut(s) 580, 906, 1327, 1342
PspPPI RGGWCCY 2 cut(s) 580, 906
PstI CTGCAG 1 cut(s) 148
PsuI RGATCY 1 cut(s) 723
RsaI GTAC 2 cut(s) 42, 574
RsaNI GTAC 2 cut(s) 41, 573
RseI CAYNNNNRTG 2 cut(s) 1148, 1196
SapI GCTCTTC 2 cut(s) 765, 773
SaqAI TTAA 6 cut(s) 266, 420, 444, 518, 743, 840
SatI GCNGC 4 cut(s) 66, 69, 147, 292
Sau3AI GATC 4 cut(s) 484, 622, 637, 723
Sau96I GGNCC 4 cut(s) 580, 906, 1327, 1342
ScrFI CCNGG 2 cut(s) 184, 1340
SduI GDGCHC 2 cut(s) 120, 1340
SfaNI GCATC 5 cut(s) 121, 303, 325, 351, 1188
SfcI CTRYAG 2 cut(s) 144, 348
SinI GGWCC 3 cut(s) 580, 906, 1327
SmiMI CAYNNNNRTG 2 cut(s) 1148, 1196
SmlI CTYRAG 2 cut(s) 443, 1236
SmoI CTYRAG 2 cut(s) 443, 1236
SsiI CCGC 2 cut(s) 65, 292
SspMI CTAG 2 cut(s) 482, 593
StyD4I CCNGG 2 cut(s) 182, 1338
TaaI ACNGT 5 cut(s) 104, 349, 797, 821, 898
TaiI ACGT 1 cut(s) 94
TaqI TCGA 2 cut(s) 96, 108
TauI GCSGC 2 cut(s) 68, 294
TfiI GAWTC 6 cut(s) 251, 308, 608, 666, 1113, 1169
Tru1I TTAA 6 cut(s) 266, 420, 444, 518, 743, 840
Tru9I TTAA 6 cut(s) 266, 420, 444, 518, 743, 840
TscAI CASTG 3 cut(s) 352, 661, 1329
TseI GCWGC 2 cut(s) 68, 146
TspDTI ATGAA 4 cut(s) 314, 600, 963, 1052
TspGWI ACGGA 2 cut(s) 203, 209
TspRI CASTG 3 cut(s) 352, 661, 1329
Vha464I CTTAAG 1 cut(s) 443
VneI GTGCAC 1 cut(s) 116
VpaK11BI GGWCC 3 cut(s) 580, 906, 1327
XagI CCTNNNNNAGG 1 cut(s) 392
XapI RAATTY 2 cut(s) 950, 1137
XbaI TCTAGA 1 cut(s) 592
XceI RCATGY 1 cut(s) 1059
XspI CTAG 2 cut(s) 482, 593
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.