Rh1AG085900

RESISTANCE protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Forward (+)
14736643 .. 14741935
5293 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG085900.1

Sequence Viewer

Length: 1596 bp
ATGAGCGTAAACATTGAGAGGATAAACCTTGAAGGCTGTGAAAGGCTGGTTGAAATTCCTTCCTACTTTGAAAATCTTCACAAGCTTACTTCATTGAATGTGACCGATTGCTCGAATCTTAGTGTTCTCTCGGATATGCCATGCAATATGGTTTCGCTGGAGTTGGGTTGGACCGCAATAGAAGACTTGCCTTCATCAATTTGGTCCCATGAAAAACTTGATGAATTGAATCTTGACGGGTGCGAGGGCATTAAGAAACTTCCAAACAGCATTTGGAAGCTGTATTCCCTCACATCTCTTGATTTGTGTAGGACAAGTATAGAAGGATTGCCCTCGTCAATCGAGTGTCTCTCTGGGTTAGAAATTCTTTTCCTGGATAATTGCAAAAGGCTTGTCAGTCTCCCAACCAGCATTTATAAGTTGAAATCTCTTAAGGACCTTCAACTTTGTGGATGCTCTAGCTTCGAAAACTTCCCTGAGATCTTGGAGCCTATGGAACTTCTGGGGAATCTTAGTTTAGCAGGAACCAAATTTACAGAGATACCCTGTTTGATTGAAAACGTAGTTGGGCGGAAGGAATTAGTGTTACCTGGGTGTAGAAGCTTTGAGTCTGTCCCAAACAGCATCTTGCCTCCGTCGTCGGTCATTTTATGGTCTTCGATGAGTAAGCTAGACCTCAGTAACTGCACAGTGTTAGAAGAAATCCCTGATTGGATCTTTAGCCTAAACAGGGTATATGAATTAAATCTGAGGGGAACCATGATTAGGAGCATACCTTCAACCATCAATCAAGCATCCCGGCTGAGGAGATTATATCTAGAGAATTGCAAGCGCCTTGAATCTTTACCCAAGCTCCCATATCTTCTAGAATGGATATTTGCAAGTGGCTGCAAGAGATTGAAGACAGTGTCTGGGTTCACGACTGCACTCACAGAAGGCTTGAATCGAAGAATTTTTTGCAAGACGCATATATTTAGTAACTGCGTAAGTTTGGATGAGAATGCAAGGAGGAACATAATGGATTATGCACATCTCAGAAATAAGGCAACAGTCATTTCAAAAAAAAAAAGAAATAAGGCAACAGCTCATCATCCGGATCCGTACCTAATGAACTACAACGCAATATGTCCGGGAAATGAAATTCCAAAATGGGTGAGCAATCAAATGGAGGGGTCTTCGATAGATATCAAGCTTCCTCTACATTGGTCTGAAGATGCAAACTTTTTAGGTTTAGCTTTCTGCGTTGTTGTTGACTTCTCTAAAGCAGAAAATAATTCGACATGTCGGGTTGAATCCATTTTCAAAACCGAAAATGGTGAAAGCCATTCCTTTAGCCATCGTCAGATCTATTTGATCCGTTGTGATGACGACAACTCAGATCACCAGGCGTTGTGGTACGATTCCCTTGAGAAGGTGAGGTCCACTCCTTATTCCAATGCCTCTTTTTATTTCTTTGTACAGCCCGGGGTTGAGAATCCGGTGAAAAGGTGTGGGGTAAGCCTTGAGTATGCTAAGGCCGAGACCGACAAAAAAAAAAAAAAGAGAAACCAGAGAATAAAAGATGTGGCTGGACCTTCAAAAAAAAAAAAGTTCTGA

Protein Analysis

531

Amino Acids

60.27

Weight (kDa)

7.96

Isoelectric Point (pI)

48.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 76 - 172 2.9e-12 Leucine-rich repeat region
C-JID PF20160 376 - 505 4.2e-15 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 417
AccIII TCCGGA 1 cut(s) 1093
AciI CCGC 2 cut(s) 174, 571
AclWI GGATC 4 cut(s) 722, 1091, 1104, 1348
AcsI RAATTY 5 cut(s) 54, 363, 530, 951, 1140
AcuI CTGAAG 1 cut(s) 1230
AfaI GTAC 3 cut(s) 1103, 1397, 1458
AfiI CCNNNNNNNGG 4 cut(s) 730, 765, 804, 1411
AflII CTTAAG 1 cut(s) 431
AflIII ACRYGT 1 cut(s) 1280
AjnI CCWGG 3 cut(s) 372, 589, 1383
AjuI GAANNNNNNNTTGG 2 cut(s) 549, 581
AluBI AGCT 9 cut(s) 85, 280, 462, 603, 670, 853, 1085, 1192, 1235
AluI AGCT 9 cut(s) 85, 280, 462, 603, 670, 853, 1085, 1192, 1235
Alw26I GTCTC 3 cut(s) 353, 404, 1514
AlwI GGATC 4 cut(s) 722, 1091, 1104, 1348
AlwNI CAGNNNCTG 2 cut(s) 684, 911
Ama87I CYCGRG 1 cut(s) 1463
Aor13HI TCCGGA 1 cut(s) 1093
AoxI GGCC 1 cut(s) 1515
ApeKI GCWGC 1 cut(s) 888
ApoI RAATTY 5 cut(s) 54, 363, 530, 951, 1140
ArsI GACNNNNNNTTYG 2 cut(s) 378, 410
Asp700I GAANNNNTTC 1 cut(s) 75
AspLEI GCGC 1 cut(s) 834
AspS9I GGNCC 5 cut(s) 171, 204, 436, 1419, 1571
AsuC2I CCSGG 4 cut(s) 799, 1131, 1464, 1465
AsuHPI GGTGA 5 cut(s) 1165, 1328, 1373, 1426, 1492
AsuII TTCGAA 1 cut(s) 465
AvaI CYCGRG 1 cut(s) 1463
AvaII GGWCC 5 cut(s) 171, 204, 436, 1419, 1571
BamHI GGATCC 1 cut(s) 1096
BbsI GAAGAC 4 cut(s) 189, 648, 908, 1167
BbvCI CCTCAGC 1 cut(s) 803
BbvI GCAGC 1 cut(s) 875
BccI CCATC 2 cut(s) 791, 1344
BciT130I CCWGG 3 cut(s) 374, 591, 1385
BcnI CCSGG 4 cut(s) 799, 1131, 1464, 1465
BcoDI GTCTC 3 cut(s) 353, 404, 1514
BfaI CTAG 4 cut(s) 459, 671, 818, 866
BfoI RGCGCY 1 cut(s) 835
BfrI CTTAAG 1 cut(s) 431
BglII AGATCT 2 cut(s) 480, 1344
BisI GCNGC 1 cut(s) 889
BlsI GCNGC 1 cut(s) 890
Bme1390I CCNGG 7 cut(s) 374, 591, 799, 1131, 1385, 1464, 1465
Bme18I GGWCC 5 cut(s) 171, 204, 436, 1419, 1571
BmeT110I CYCGRG 1 cut(s) 1463
BmgT120I GGNCC 5 cut(s) 171, 204, 436, 1419, 1571
BmiI GGNNCC 5 cut(s) 206, 489, 526, 757, 1098
BmrFI CCNGG 7 cut(s) 374, 591, 799, 1131, 1385, 1464, 1465
BmsI GCATC 4 cut(s) 443, 633, 803, 1204
BpiI GAAGAC 4 cut(s) 189, 648, 908, 1167
BplI GAGNNNNNCTC 4 cut(s) 335, 367, 1408, 1440
BpmI CTGGAG 1 cut(s) 179
Bpu10I CCTNAGC 2 cut(s) 803, 1512
Bpu14I TTCGAA 1 cut(s) 465
BpuEI CTTGAG 2 cut(s) 1427, 1523
BpuMI CCSGG 4 cut(s) 799, 1131, 1464, 1465
BsaBI GATNNNNATC 1 cut(s) 1184
BsaI GGTCTC 1 cut(s) 1514
BsaJI CCNNGG 3 cut(s) 590, 1463, 1464
BsaWI WCCGGW 2 cut(s) 1093, 1477
BsaXI ACNNNNNCTCC 2 cut(s) 837, 867
Bsc4I CCNNNNNNNGG 4 cut(s) 730, 765, 804, 1411
Bse8I GATNNNNATC 1 cut(s) 1184
BseAI TCCGGA 1 cut(s) 1093
BseBI CCWGG 3 cut(s) 374, 591, 1385
BseDI CCNNGG 3 cut(s) 590, 1463, 1464
BseGI GGATG 4 cut(s) 458, 794, 1000, 1090
BseJI GATNNNNATC 1 cut(s) 1184
BseLI CCNNNNNNNGG 4 cut(s) 730, 765, 804, 1411
BseMII CTCAG 6 cut(s) 468, 691, 740, 794, 1048, 1389
BseRI GAGGAG 1 cut(s) 820
BseXI GCAGC 1 cut(s) 875
BsgI GTGCAG 2 cut(s) 670, 909
BshFI GGCC 1 cut(s) 1517
BsiHKCI CYCGRG 1 cut(s) 1463
BsiSI CCGG 5 cut(s) 799, 1094, 1130, 1464, 1478
BslFI GGGAC 2 cut(s) 190, 599
BslI CCNNNNNNNGG 4 cut(s) 730, 765, 804, 1411
BsmAI GTCTC 3 cut(s) 353, 404, 1514
BsmFI GGGAC 2 cut(s) 190, 599
BsmI GAATGC 1 cut(s) 1006
BsnI GGCC 1 cut(s) 1517
Bso31I GGTCTC 1 cut(s) 1514
BsoBI CYCGRG 1 cut(s) 1463
Bsp119I TTCGAA 1 cut(s) 465
Bsp13I TCCGGA 1 cut(s) 1093
Bsp1407I TGTACA 1 cut(s) 1456
Bsp143I GATC 6 cut(s) 480, 714, 1096, 1344, 1353, 1378
BspACI CCGC 2 cut(s) 174, 571
BspANI GGCC 1 cut(s) 1517
BspCNI CTCAG 6 cut(s) 469, 690, 741, 795, 1047, 1388
BspEI TCCGGA 1 cut(s) 1093
BspLI GGNNCC 5 cut(s) 206, 489, 526, 757, 1098
BspPI GGATC 4 cut(s) 722, 1091, 1104, 1348
BspT104I TTCGAA 1 cut(s) 465
BspTI CTTAAG 1 cut(s) 431
BspTNI GGTCTC 1 cut(s) 1514
BsrGI TGTACA 1 cut(s) 1456
BssECI CCNNGG 3 cut(s) 590, 1463, 1464
BssMI GATC 6 cut(s) 480, 714, 1096, 1344, 1353, 1378
Bst2UI CCWGG 3 cut(s) 374, 591, 1385
Bst4CI ACNGT 3 cut(s) 691, 907, 1051
BstAFI CTTAAG 1 cut(s) 431
BstAUI TGTACA 1 cut(s) 1456
BstBI TTCGAA 1 cut(s) 465
BstC8I GCNNGC 1 cut(s) 830
BstDEI CTNAG 9 cut(s) 119, 477, 512, 677, 749, 803, 1034, 1375, 1512
BstENI CCTNNNNNAGG 1 cut(s) 1409
BstF5I GGATG 4 cut(s) 458, 794, 1000, 1090
BstH2I RGCGCY 1 cut(s) 835
BstHHI GCGC 1 cut(s) 834
BstKTI GATC 6 cut(s) 483, 717, 1099, 1347, 1356, 1381
BstMAI GTCTC 3 cut(s) 353, 404, 1514
BstMBI GATC 6 cut(s) 480, 714, 1096, 1344, 1353, 1378
BstNI CCWGG 3 cut(s) 374, 591, 1385
BstNSI RCATGY 1 cut(s) 1284
BstSCI CCNGG 7 cut(s) 372, 589, 797, 1129, 1383, 1462, 1463
BstV1I GCAGC 1 cut(s) 875
BstV2I GAAGAC 4 cut(s) 189, 648, 908, 1167
BstX2I RGATCY 4 cut(s) 480, 714, 1096, 1344
BstYI RGATCY 4 cut(s) 480, 714, 1096, 1344
BsuRI GGCC 1 cut(s) 1517
BtsCI GGATG 4 cut(s) 458, 794, 1000, 1090
BtsIMutI CAGTG 2 cut(s) 696, 912
Cac8I GCNNGC 1 cut(s) 830
CaiI CAGNNNCTG 2 cut(s) 684, 911
CfoI GCGC 1 cut(s) 834
Cfr13I GGNCC 5 cut(s) 171, 204, 436, 1419, 1571
Cfr9I CCCGGG 1 cut(s) 1463
CseI GACGC 1 cut(s) 973
Csp6I GTAC 3 cut(s) 1102, 1396, 1457
CviAII CATG 4 cut(s) 141, 209, 760, 1281
CviQI GTAC 3 cut(s) 1102, 1396, 1457
DdeI CTNAG 9 cut(s) 119, 477, 512, 677, 749, 803, 1034, 1375, 1512
DpnI GATC 6 cut(s) 482, 716, 1098, 1346, 1355, 1380
DpnII GATC 6 cut(s) 480, 714, 1096, 1344, 1353, 1378
EciI GGCGGA 1 cut(s) 586
Eco31I GGTCTC 1 cut(s) 1514
Eco32I GATATC 1 cut(s) 1186
Eco47I GGWCC 5 cut(s) 171, 204, 436, 1419, 1571
Eco57I CTGAAG 1 cut(s) 1230
Eco88I CYCGRG 1 cut(s) 1463
EcoNI CCTNNNNNAGG 1 cut(s) 1409
EcoO109I RGGNCCY 1 cut(s) 436
EcoRII CCWGG 3 cut(s) 372, 589, 1383
EcoRV GATATC 1 cut(s) 1186
FaeI CATG 4 cut(s) 144, 212, 763, 1284
FaqI GGGAC 2 cut(s) 190, 599
FatI CATG 4 cut(s) 140, 208, 759, 1280
Fnu4HI GCNGC 1 cut(s) 889
FokI GGATG 4 cut(s) 465, 781, 1007, 1077
Fsp4HI GCNGC 1 cut(s) 889
FspBI CTAG 4 cut(s) 459, 671, 818, 866
GlaI GCGC 1 cut(s) 833
GluI GCNGC 1 cut(s) 889
GsuI CTGGAG 1 cut(s) 179
HaeII RGCGCY 1 cut(s) 835
HaeIII GGCC 1 cut(s) 1517
HapII CCGG 5 cut(s) 799, 1094, 1130, 1464, 1478
HgaI GACGC 1 cut(s) 973
HhaI GCGC 1 cut(s) 834
Hin1II CATG 4 cut(s) 144, 212, 763, 1284
Hin6I GCGC 1 cut(s) 832
HinP1I GCGC 1 cut(s) 832
HincII GTYRAC 1 cut(s) 1252
HindII GTYRAC 1 cut(s) 1252
HindIII AAGCTT 3 cut(s) 83, 601, 1190
HinfI GANTC 9 cut(s) 115, 229, 508, 608, 839, 943, 1292, 1400, 1474
HpaII CCGG 5 cut(s) 799, 1094, 1130, 1464, 1478
HphI GGTGA 5 cut(s) 1165, 1328, 1373, 1426, 1492
Hpy166II GTNNAC 4 cut(s) 10, 918, 1252, 1422
Hpy188I TCNGA 7 cut(s) 133, 750, 1037, 1210, 1344, 1378, 1595
Hpy188III TCNNGA 6 cut(s) 233, 299, 818, 866, 919, 1094
Hpy8I GTNNAC 4 cut(s) 10, 918, 1252, 1422
Hpy99I CGWCG 2 cut(s) 640, 643
HpyCH4III ACNGT 3 cut(s) 691, 907, 1051
HpyCH4IV ACGT 1 cut(s) 561
HpyF3I CTNAG 9 cut(s) 119, 477, 512, 677, 749, 803, 1034, 1375, 1512
HpySE526I ACGT 1 cut(s) 561
Hsp92II CATG 4 cut(s) 144, 212, 763, 1284
HspAI GCGC 1 cut(s) 832
Kpn2I TCCGGA 1 cut(s) 1093
Kzo9I GATC 6 cut(s) 480, 714, 1096, 1344, 1353, 1378
LmnI GCTCC 3 cut(s) 487, 768, 858
Lsp1109I GCAGC 1 cut(s) 875
LweI GCATC 4 cut(s) 443, 633, 803, 1204
MaeI CTAG 4 cut(s) 459, 671, 818, 866
MaeII ACGT 1 cut(s) 561
MaeIII GTNAC 4 cut(s) 100, 585, 680, 977
MalI GATC 6 cut(s) 482, 716, 1098, 1346, 1355, 1380
MboI GATC 6 cut(s) 480, 714, 1096, 1344, 1353, 1378
MboII GAAGA 9 cut(s) 68, 194, 648, 710, 854, 913, 960, 1167, 1223
MflI RGATCY 4 cut(s) 480, 714, 1096, 1344
MlyI GAGTC 1 cut(s) 617
MmeI TCCRAC 1 cut(s) 149
MroI TCCGGA 1 cut(s) 1093
MroXI GAANNNNTTC 1 cut(s) 75
MseI TTAA 3 cut(s) 252, 432, 743
MspCI CTTAAG 1 cut(s) 431
MspI CCGG 5 cut(s) 799, 1094, 1130, 1464, 1478
MspR9I CCNGG 7 cut(s) 374, 591, 799, 1131, 1385, 1464, 1465
Mva1269I GAATGC 1 cut(s) 1006
MvaI CCWGG 3 cut(s) 374, 591, 1385
NciI CCSGG 4 cut(s) 799, 1131, 1464, 1465
NdeII GATC 6 cut(s) 480, 714, 1096, 1344, 1353, 1378
NlaIII CATG 4 cut(s) 144, 212, 763, 1284
NlaIV GGNNCC 5 cut(s) 206, 489, 526, 757, 1098
NmeAIII GCCGAG 1 cut(s) 1543
NmuCI GTSAC 1 cut(s) 100
NspI RCATGY 1 cut(s) 1284
NspV TTCGAA 1 cut(s) 465
PciI ACATGT 1 cut(s) 1280
PctI GAATGC 1 cut(s) 1006
PdmI GAANNNNTTC 1 cut(s) 75
PfeI GAWTC 8 cut(s) 115, 229, 508, 839, 943, 1292, 1400, 1474
PflFI GACNNNGTC 1 cut(s) 907
PfoI TCCNGGA 2 cut(s) 372, 1129
PkrI GCNGC 1 cut(s) 890
PleI GAGTC 1 cut(s) 616
PpsI GAGTC 1 cut(s) 616
PpuMI RGGWCCY 1 cut(s) 436
PscI ACATGT 1 cut(s) 1280
PsiI TTATAA 1 cut(s) 417
Psp5II RGGWCCY 1 cut(s) 436
Psp6I CCWGG 3 cut(s) 372, 589, 1383
PspGI CCWGG 3 cut(s) 372, 589, 1383
PspN4I GGNNCC 5 cut(s) 206, 489, 526, 757, 1098
PspPI GGNCC 5 cut(s) 171, 204, 436, 1419, 1571
PspPPI RGGWCCY 1 cut(s) 436
PsrI GAACNNNNNNTAC 2 cut(s) 517, 549
PstNI CAGNNNCTG 2 cut(s) 684, 911
PsuI RGATCY 4 cut(s) 480, 714, 1096, 1344
PsyI GACNNNGTC 1 cut(s) 907
RsaI GTAC 3 cut(s) 1103, 1397, 1458
RsaNI GTAC 3 cut(s) 1102, 1396, 1457
SaqAI TTAA 3 cut(s) 252, 432, 743
SatI GCNGC 1 cut(s) 889
Sau3AI GATC 6 cut(s) 480, 714, 1096, 1344, 1353, 1378
Sau96I GGNCC 5 cut(s) 171, 204, 436, 1419, 1571
SchI GAGTC 1 cut(s) 617
ScrFI CCNGG 7 cut(s) 374, 591, 799, 1131, 1385, 1464, 1465
SfaNI GCATC 4 cut(s) 443, 633, 803, 1204
SfuI TTCGAA 1 cut(s) 465
SinI GGWCC 5 cut(s) 171, 204, 436, 1419, 1571
SmaI CCCGGG 1 cut(s) 1465
SmlI CTYRAG 3 cut(s) 431, 1406, 1502
SmoI CTYRAG 3 cut(s) 431, 1406, 1502
SsiI CCGC 2 cut(s) 174, 571
SspMI CTAG 4 cut(s) 459, 671, 818, 866
StyD4I CCNGG 7 cut(s) 372, 589, 797, 1129, 1383, 1462, 1463
TaaI ACNGT 3 cut(s) 691, 907, 1051
TaiI ACGT 1 cut(s) 564
TaqI TCGA 7 cut(s) 113, 342, 465, 659, 946, 1178, 1277
TaqII GACCGA 3 cut(s) 119, 631, 1538
TatI WGTACW 1 cut(s) 1456
TfiI GAWTC 8 cut(s) 115, 229, 508, 839, 943, 1292, 1400, 1474
Tru1I TTAA 3 cut(s) 252, 432, 743
Tru9I TTAA 3 cut(s) 252, 432, 743
TscAI CASTG 2 cut(s) 696, 912
TseFI GTSAC 1 cut(s) 100
TseI GCWGC 1 cut(s) 888
Tsp45I GTSAC 1 cut(s) 100
TspDTI ATGAA 7 cut(s) 81, 183, 225, 237, 753, 1124, 1152
TspGWI ACGGA 3 cut(s) 624, 1089, 1346
TspMI CCCGGG 1 cut(s) 1463
TspRI CASTG 2 cut(s) 696, 912
Tth111I GACNNNGTC 1 cut(s) 907
Vha464I CTTAAG 1 cut(s) 431
VpaK11BI GGWCC 5 cut(s) 171, 204, 436, 1419, 1571
XagI CCTNNNNNAGG 1 cut(s) 1409
XapI RAATTY 5 cut(s) 54, 363, 530, 951, 1140
XbaI TCTAGA 2 cut(s) 817, 865
XceI RCATGY 1 cut(s) 1284
XcmI CCANNNNNNNNNTGG 1 cut(s) 270
XmaI CCCGGG 1 cut(s) 1463
XmnI GAANNNNTTC 1 cut(s) 75
XspI CTAG 4 cut(s) 459, 671, 818, 866
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.