TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 2 - 146 | 1e-11 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 2 cut(s) | 300, 534 |
| AciI | CCGC | 1 cut(s) | 116 |
| AclWI | GGATC | 1 cut(s) | 539 |
| AcsI | RAATTY | 1 cut(s) | 369 |
| AfaI | GTAC | 2 cut(s) | 289, 347 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 393 |
| AgeI | ACCGGT | 1 cut(s) | 356 |
| AgsI | TTSAA | 4 cut(s) | 103, 440, 497, 574 |
| AhlI | ACTAGT | 1 cut(s) | 608 |
| AluBI | AGCT | 1 cut(s) | 40 |
| AluI | AGCT | 1 cut(s) | 40 |
| Alw26I | GTCTC | 3 cut(s) | 418, 520, 599 |
| AlwI | GGATC | 1 cut(s) | 539 |
| AoxI | GGCC | 1 cut(s) | 324 |
| ApoI | RAATTY | 1 cut(s) | 369 |
| AseI | ATTAAT | 1 cut(s) | 126 |
| AsiGI | ACCGGT | 1 cut(s) | 356 |
| AspS9I | GGNCC | 2 cut(s) | 134, 359 |
| AsuC2I | CCSGG | 1 cut(s) | 549 |
| AsuHPI | GGTGA | 2 cut(s) | 322, 409 |
| AvaII | GGWCC | 2 cut(s) | 134, 359 |
| BccI | CCATC | 1 cut(s) | 168 |
| BcnI | CCSGG | 1 cut(s) | 549 |
| BcoDI | GTCTC | 3 cut(s) | 418, 520, 599 |
| BcuI | ACTAGT | 1 cut(s) | 608 |
| BfaI | CTAG | 1 cut(s) | 609 |
| BisI | GCNGC | 1 cut(s) | 116 |
| BlsI | GCNGC | 1 cut(s) | 117 |
| Bme1390I | CCNGG | 1 cut(s) | 549 |
| Bme18I | GGWCC | 2 cut(s) | 134, 359 |
| BmgT120I | GGNCC | 2 cut(s) | 134, 359 |
| BmiI | GGNNCC | 3 cut(s) | 157, 248, 480 |
| BmrFI | CCNGG | 1 cut(s) | 549 |
| BmsI | GCATC | 1 cut(s) | 326 |
| BpuMI | CCSGG | 1 cut(s) | 549 |
| BsaBI | GATNNNNATC | 1 cut(s) | 32 |
| BsaJI | CCNNGG | 2 cut(s) | 70, 321 |
| BsaWI | WCCGGW | 1 cut(s) | 356 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 393 |
| Bse118I | RCCGGY | 1 cut(s) | 356 |
| Bse8I | GATNNNNATC | 1 cut(s) | 32 |
| BseDI | CCNNGG | 2 cut(s) | 70, 321 |
| BseGI | GGATG | 2 cut(s) | 49, 317 |
| BseJI | GATNNNNATC | 1 cut(s) | 32 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 393 |
| BseRI | GAGGAG | 1 cut(s) | 36 |
| Bsh1236I | CGCG | 2 cut(s) | 300, 534 |
| BshFI | GGCC | 1 cut(s) | 326 |
| BshTI | ACCGGT | 1 cut(s) | 356 |
| BsiSI | CCGG | 2 cut(s) | 357, 549 |
| BslFI | GGGAC | 1 cut(s) | 33 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 393 |
| BsmAI | GTCTC | 3 cut(s) | 418, 520, 599 |
| BsmBI | CGTCTC | 1 cut(s) | 520 |
| BsmFI | GGGAC | 1 cut(s) | 33 |
| BsmI | GAATGC | 1 cut(s) | 98 |
| BsnI | GGCC | 1 cut(s) | 326 |
| Bsp143I | GATC | 3 cut(s) | 187, 238, 544 |
| Bsp68I | TCGCGA | 1 cut(s) | 300 |
| BspACI | CCGC | 1 cut(s) | 116 |
| BspANI | GGCC | 1 cut(s) | 326 |
| BspFNI | CGCG | 2 cut(s) | 300, 534 |
| BspLI | GGNNCC | 3 cut(s) | 157, 248, 480 |
| BspPI | GGATC | 1 cut(s) | 539 |
| BsrFI | RCCGGY | 1 cut(s) | 356 |
| BssAI | RCCGGY | 1 cut(s) | 356 |
| BssECI | CCNNGG | 2 cut(s) | 70, 321 |
| BssMI | GATC | 3 cut(s) | 187, 238, 544 |
| Bst4CI | ACNGT | 1 cut(s) | 391 |
| Bst6I | CTCTTC | 1 cut(s) | 550 |
| BstDEI | CTNAG | 1 cut(s) | 522 |
| BstF5I | GGATG | 2 cut(s) | 49, 317 |
| BstFNI | CGCG | 2 cut(s) | 300, 534 |
| BstKTI | GATC | 3 cut(s) | 190, 241, 547 |
| BstMAI | GTCTC | 3 cut(s) | 418, 520, 599 |
| BstMBI | GATC | 3 cut(s) | 187, 238, 544 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 323 |
| BstSCI | CCNGG | 1 cut(s) | 547 |
| BstUI | CGCG | 2 cut(s) | 300, 534 |
| BsuRI | GGCC | 1 cut(s) | 326 |
| BtsCI | GGATG | 2 cut(s) | 49, 317 |
| BtsIMutI | CAGTG | 1 cut(s) | 387 |
| BtuMI | TCGCGA | 1 cut(s) | 300 |
| Cfr10I | RCCGGY | 1 cut(s) | 356 |
| Cfr13I | GGNCC | 2 cut(s) | 134, 359 |
| CpoI | CGGWCCG | 1 cut(s) | 359 |
| CseI | GACGC | 1 cut(s) | 540 |
| Csp6I | GTAC | 2 cut(s) | 288, 346 |
| CspAI | ACCGGT | 1 cut(s) | 356 |
| CspI | CGGWCCG | 1 cut(s) | 359 |
| CviAII | CATG | 2 cut(s) | 340, 631 |
| CviJI | RGCY | 3 cut(s) | 40, 66, 326 |
| CviKI_1 | RGCY | 3 cut(s) | 40, 66, 326 |
| CviQI | GTAC | 2 cut(s) | 288, 346 |
| DdeI | CTNAG | 1 cut(s) | 522 |
| DpnI | GATC | 3 cut(s) | 189, 240, 546 |
| DpnII | GATC | 3 cut(s) | 187, 238, 544 |
| Eam1104I | CTCTTC | 1 cut(s) | 550 |
| EarI | CTCTTC | 1 cut(s) | 550 |
| Eco147I | AGGCCT | 1 cut(s) | 326 |
| Eco32I | GATATC | 1 cut(s) | 508 |
| Eco47I | GGWCC | 2 cut(s) | 134, 359 |
| EcoRV | GATATC | 1 cut(s) | 508 |
| EcoT22I | ATGCAT | 1 cut(s) | 89 |
| Esp3I | CGTCTC | 1 cut(s) | 520 |
| FaeI | CATG | 2 cut(s) | 343, 634 |
| FaiI | YATR | 9 cut(s) | 24, 85, 111, 206, 224, 341, 426, 476, 632 |
| FaqI | GGGAC | 1 cut(s) | 33 |
| FatI | CATG | 2 cut(s) | 339, 630 |
| Fnu4HI | GCNGC | 1 cut(s) | 116 |
| FokI | GGATG | 2 cut(s) | 36, 304 |
| Fsp4HI | GCNGC | 1 cut(s) | 116 |
| FspBI | CTAG | 1 cut(s) | 609 |
| GluI | GCNGC | 1 cut(s) | 116 |
| HaeIII | GGCC | 1 cut(s) | 326 |
| HapII | CCGG | 2 cut(s) | 357, 549 |
| HgaI | GACGC | 1 cut(s) | 540 |
| Hin1II | CATG | 2 cut(s) | 343, 634 |
| HindIII | AAGCTT | 1 cut(s) | 38 |
| HinfI | GANTC | 1 cut(s) | 411 |
| HpaII | CCGG | 2 cut(s) | 357, 549 |
| HphI | GGTGA | 2 cut(s) | 322, 409 |
| Hpy188I | TCNGA | 5 cut(s) | 238, 322, 363, 544, 604 |
| Hpy188III | TCNNGA | 1 cut(s) | 299 |
| Hpy99I | CGWCG | 2 cut(s) | 15, 534 |
| HpyCH4III | ACNGT | 1 cut(s) | 391 |
| HpyCH4IV | ACGT | 1 cut(s) | 13 |
| HpyCH4V | TGCA | 3 cut(s) | 87, 98, 566 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 323 |
| HpyF3I | CTNAG | 1 cut(s) | 522 |
| HpySE526I | ACGT | 1 cut(s) | 13 |
| Hsp92II | CATG | 2 cut(s) | 343, 634 |
| Kzo9I | GATC | 3 cut(s) | 187, 238, 544 |
| LpnPI | CCDG | 3 cut(s) | 228, 370, 562 |
| LweI | GCATC | 1 cut(s) | 326 |
| MaeI | CTAG | 1 cut(s) | 609 |
| MaeII | ACGT | 1 cut(s) | 13 |
| MaeIII | GTNAC | 2 cut(s) | 74, 179 |
| MalI | GATC | 3 cut(s) | 189, 240, 546 |
| MboI | GATC | 3 cut(s) | 187, 238, 544 |
| MboII | GAAGA | 8 cut(s) | 476, 509, 512, 515, 562, 567, 590, 593 |
| MluCI | AATT | 5 cut(s) | 225, 232, 369, 443, 561 |
| MlyI | GAGTC | 1 cut(s) | 420 |
| Mph1103I | ATGCAT | 1 cut(s) | 89 |
| MseI | TTAA | 2 cut(s) | 126, 333 |
| MspI | CCGG | 2 cut(s) | 357, 549 |
| MspR9I | CCNGG | 1 cut(s) | 549 |
| Mva1269I | GAATGC | 1 cut(s) | 98 |
| MvnI | CGCG | 2 cut(s) | 300, 534 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 323 |
| NciI | CCSGG | 1 cut(s) | 549 |
| NdeII | GATC | 3 cut(s) | 187, 238, 544 |
| NlaIII | CATG | 2 cut(s) | 343, 634 |
| NlaIV | GGNNCC | 3 cut(s) | 157, 248, 480 |
| NmuCI | GTSAC | 1 cut(s) | 179 |
| NruI | TCGCGA | 1 cut(s) | 300 |
| NsiI | ATGCAT | 1 cut(s) | 89 |
| PceI | AGGCCT | 1 cut(s) | 326 |
| PctI | GAATGC | 1 cut(s) | 98 |
| PinAI | ACCGGT | 1 cut(s) | 356 |
| PkrI | GCNGC | 1 cut(s) | 117 |
| PleI | GAGTC | 1 cut(s) | 419 |
| PpsI | GAGTC | 1 cut(s) | 419 |
| PshBI | ATTAAT | 1 cut(s) | 126 |
| PspN4I | GGNNCC | 3 cut(s) | 157, 248, 480 |
| PspPI | GGNCC | 2 cut(s) | 134, 359 |
| RruI | TCGCGA | 1 cut(s) | 300 |
| RsaI | GTAC | 2 cut(s) | 289, 347 |
| RsaNI | GTAC | 2 cut(s) | 288, 346 |
| Rsr2I | CGGWCCG | 1 cut(s) | 359 |
| RsrII | CGGWCCG | 1 cut(s) | 359 |
| SaqAI | TTAA | 2 cut(s) | 126, 333 |
| SatI | GCNGC | 1 cut(s) | 116 |
| Sau3AI | GATC | 3 cut(s) | 187, 238, 544 |
| Sau96I | GGNCC | 2 cut(s) | 134, 359 |
| SchI | GAGTC | 1 cut(s) | 420 |
| ScrFI | CCNGG | 1 cut(s) | 549 |
| SetI | ASST | 8 cut(s) | 8, 16, 42, 139, 143, 201, 384, 407 |
| SfaNI | GCATC | 1 cut(s) | 326 |
| SinI | GGWCC | 2 cut(s) | 134, 359 |
| SpeI | ACTAGT | 1 cut(s) | 608 |
| Sse9I | AATT | 5 cut(s) | 225, 232, 369, 443, 561 |
| SseBI | AGGCCT | 1 cut(s) | 326 |
| SsiI | CCGC | 1 cut(s) | 116 |
| SspI | AATATT | 1 cut(s) | 130 |
| SspMI | CTAG | 1 cut(s) | 609 |
| StuI | AGGCCT | 1 cut(s) | 326 |
| StyD4I | CCNGG | 1 cut(s) | 547 |
| TaaI | ACNGT | 1 cut(s) | 391 |
| TaiI | ACGT | 1 cut(s) | 16 |
| TaqI | TCGA | 3 cut(s) | 10, 201, 277 |
| TasI | AATT | 5 cut(s) | 225, 232, 369, 443, 561 |
| TatI | WGTACW | 1 cut(s) | 287 |
| TauI | GCSGC | 1 cut(s) | 118 |
| Tru1I | TTAA | 2 cut(s) | 126, 333 |
| Tru9I | TTAA | 2 cut(s) | 126, 333 |
| TscAI | CASTG | 1 cut(s) | 394 |
| TseFI | GTSAC | 1 cut(s) | 179 |
| Tsp45I | GTSAC | 1 cut(s) | 179 |
| TspDTI | ATGAA | 2 cut(s) | 328, 477 |
| TspGWI | ACGGA | 1 cut(s) | 42 |
| TspRI | CASTG | 1 cut(s) | 394 |
| VpaK11BI | GGWCC | 2 cut(s) | 134, 359 |
| VspI | ATTAAT | 1 cut(s) | 126 |
| XapI | RAATTY | 1 cut(s) | 369 |
| XspI | CTAG | 1 cut(s) | 609 |
| Zsp2I | ATGCAT | 1 cut(s) | 89 |