Rmu_ssc0000042.1_g000019

RESISTANCE protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000042.1
Physical Location & Seq
Reverse (-)
97661 .. 102005
4345 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000042.1_g000019.1.cds

Sequence Viewer

Length: 2364 bp
atgcaacaactgcataaaggagctaaccatgatgttgtaatatacaaggcagaggaactagatcatgatgaagcacttcagctcttccacttgaatgattctgaggaaatcagttgcggagcagaatataccgaattagtgagaacggtggtgcattatgctgcgggaattcccttagcccttaaaatatggggttccttatttcgtcgatgcaagagcacacaagagcgggagagtttcttgaaaaagttgaaaaggtttcctgaaaaggaacttcaagatgtgtataggataagttatgatgcattaggagaaaatgagagggagatatttctttatatcgcatgtttccacaaaggagagaatgtaaatagagcaaaagaacaattggatgcatgtgaattatgtgcggatagtggaatcaacattctcattgatatgtctctgatatcaatcagagacaaatggcggacagaaagaactggttacttgtggatgcatgatttgatacaagaaatgggttgggcaattgtgcgtgaacaacatccgaagcctggaaagcgcagtaggctgtgtaccccggaggacatctgttatgtgttggaaaagaataagaagcctaggaacttaaaacgcatcgatctcagttattctatgcagctggttgaagttccagatctctctatgagcgtaaacattgagaggataaaccttcaaggctgtaaaaggctggttgaaattccttcctattttgaaaatcttcacaagcttacttcattgaatgcgaccaattgctcgaatcttagtgttctctcggatatgccatgcaatatggtttcgctggacttgggtgggactgcaatagaagacttgccttcatcaatttggtcccttgaaaaacttgttgaattggaccttgaagggtgcgagggcattaagaaacttccaaacagcatttggaagctatattccctcacatatctttatttgtgtgggacaagtatagaaggattgccctcgtcaatcgagagtctctctgggttaaaatctcttttcctgtataattgcaaaaggtttgtcagtctcccaaccagcatttataagttgaaatctcttaagaattttaatctttatggatgctctagcttggaaaacttccctgagatcttggagcctatggaaattctggggaatcttagtttagcaggaaccaaatttgaagagctaccctctttgattgaaaacgcagttgggcggaaggaattagtgttacctgggtgtagaagctttgagtctgtcccaaacagcatcttgcctccgtcgtcggtcattttatggtcttcgatgattaagctagacgtcagtgactgcacaatgttagaagaaatccctgattggatctttagcctaaactggttatctgaattaaatctgagtggaaccatgattaggagcataccttcaaccatcaatcaagcatcccggctgaggggattagatctagagaattgcaagcgccttgaatctttgcccaagctcccatgtcttctagaattgatatttgcaagtggctgcaagagattgaagacagtgtctgggttcacgactgcactcacagaaggtttggatcgaacatttctttccacgatgcatatatttgttaactgcgtaagtttggatgagaatgcaaggaggaacataatggattatgcacatcttagaaataaggcaacagctcgtcatccggatccgtaccaaatgaggtacgaagcaacatgtccgggaaatgaaattccaaaatgggtgagcaatcaaatggaggggtcttcgatagatatcaagcttcctctacattggtctgaagatgcagactttttgggtttagctttctgcgttgttgttgacttctctaaagtagaaaattatgcgacatgtcggggtgaatccattttcaaaaccgaaaatggtgaaagccatacctttaggagctattttcagagcgatttgttccgttgtgatgacgacaactcagatcacctggtgttgtggtacgattcccttgggtcggtgaggtccactccttattccaatgccactcaagcctcttttcatttctttgtacacagctttgatggaaagcgactgcgcgagaatccggtgaaaaggtgtgggttgatcgaggatgaaaatctgctgcagcgcggtgtaggtggcaactggcgagggctttgggggacatggaagaagatgatttcagcttaccttcgtggaatccacaggatgggtcatgtcaccggtactattaaggctctggcgaatgaggagagtgaagagtatgtcaagtgggaagaagaagacgcttaa

Protein Analysis

787

Amino Acids

89.73

Weight (kDa)

5.64

Isoelectric Point (pI)

49.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1101
AatII GACGTC 1 cut(s) 1362
AccB7I CCANNNNNTGG 1 cut(s) 2281
AccBSI CCGCTC 1 cut(s) 229
AccII CGCG 2 cut(s) 2148, 2202
AccIII TCCGGA 1 cut(s) 1744
AciI CCGC 7 cut(s) 117, 164, 229, 410, 469, 1255, 2202
AclWI GGATC 4 cut(s) 1406, 1635, 1742, 1755
AcsI RAATTY 6 cut(s) 168, 738, 1120, 1182, 1214, 1791
AcuI CTGAAG 2 cut(s) 62, 1881
AcyI GRCGYC 1 cut(s) 1359
AdeI CACNNNGTG 1 cut(s) 2041
AfaI GTAC 6 cut(s) 577, 1754, 1766, 2051, 2121, 2299
AfiI CCNNNNNNNGG 6 cut(s) 554, 1449, 1488, 1489, 2065, 2281
AflII CTTAAG 1 cut(s) 1115
AflIII ACRYGT 2 cut(s) 1775, 1931
AgeI ACCGGT 1 cut(s) 2294
AjnI CCWGG 3 cut(s) 553, 1273, 2037
AjuI GAANNNNNNNTTGG 2 cut(s) 1233, 1265
Alw21I GWGCWC 1 cut(s) 221
Alw26I GTCTC 4 cut(s) 447, 453, 1037, 1088
AlwI GGATC 4 cut(s) 1406, 1635, 1742, 1755
AlwNI CAGNNNCTG 2 cut(s) 1368, 1595
Aor13HI TCCGGA 1 cut(s) 1744
ApeKI GCWGC 5 cut(s) 161, 658, 1572, 2194, 2197
ApoI RAATTY 6 cut(s) 168, 738, 1120, 1182, 1214, 1791
ArsI GACNNNNNNTTYG 2 cut(s) 1062, 1094
AsiGI ACCGGT 1 cut(s) 2294
Asp700I GAANNNNTTC 2 cut(s) 75, 759
AspA2I CCTAGG 1 cut(s) 620
AspLEI GCGC 4 cut(s) 564, 1518, 2148, 2202
AspS9I GGNCC 3 cut(s) 888, 913, 2073
AsuC2I CCSGG 3 cut(s) 581, 1483, 1782
AsuHPI GGTGA 7 cut(s) 1816, 1952, 1979, 2027, 2080, 2170, 2284
AvaII GGWCC 3 cut(s) 888, 913, 2073
AvrII CCTAGG 1 cut(s) 620
BamHI GGATCC 1 cut(s) 1747
BbsI GAAGAC 5 cut(s) 873, 1332, 1538, 1592, 1818
Bbv12I GWGCWC 1 cut(s) 221
BbvCI CCTCAGC 1 cut(s) 1487
BbvI GCAGC 5 cut(s) 148, 670, 1559, 2181, 2209
BccI CCATC 3 cut(s) 1475, 2126, 2275
BciT130I CCWGG 3 cut(s) 555, 1275, 2039
BcnI CCSGG 3 cut(s) 581, 1483, 1782
BcoDI GTCTC 4 cut(s) 447, 453, 1037, 1088
BfaI CTAG 6 cut(s) 59, 621, 1143, 1355, 1502, 1550
BfmI CTRYAG 1 cut(s) 2195
BfoI RGCGCY 1 cut(s) 1519
BfrI CTTAAG 1 cut(s) 1115
BglII AGATCT 3 cut(s) 676, 1164, 1498
BisI GCNGC 5 cut(s) 162, 659, 1573, 2195, 2198
BlnI CCTAGG 1 cut(s) 620
BlsI GCNGC 5 cut(s) 163, 660, 1574, 2196, 2199
Bme1390I CCNGG 6 cut(s) 555, 581, 1275, 1483, 1782, 2039
Bme18I GGWCC 3 cut(s) 888, 913, 2073
BmgT120I GGNCC 3 cut(s) 888, 913, 2073
BmiI GGNNCC 6 cut(s) 196, 890, 1173, 1210, 1441, 1749
BmrFI CCNGG 6 cut(s) 555, 581, 1275, 1483, 1782, 2039
BpiI GAAGAC 5 cut(s) 873, 1332, 1538, 1592, 1818
BplI GAGNNNNNCTC 6 cut(s) 1019, 1051, 1214, 1246, 2062, 2094
Bpu10I CCTNAGC 2 cut(s) 175, 1487
BpuEI CTTGAG 1 cut(s) 2082
BpuMI CCSGG 3 cut(s) 581, 1483, 1782
Bsa29I ATCGAT 1 cut(s) 639
BsaBI GATNNNNATC 3 cut(s) 452, 1835, 2187
BsaHI GRCGYC 1 cut(s) 1359
BsaJI CCNNGG 4 cut(s) 579, 620, 1274, 2059
BsaWI WCCGGW 3 cut(s) 1744, 2155, 2294
BsaXI ACNNNNNCTCC 2 cut(s) 351, 381
Bsc4I CCNNNNNNNGG 6 cut(s) 554, 1449, 1488, 1489, 2065, 2281
Bse118I RCCGGY 1 cut(s) 2294
Bse1I ACTGG 3 cut(s) 487, 1418, 2222
Bse8I GATNNNNATC 3 cut(s) 452, 1835, 2187
BseAI TCCGGA 1 cut(s) 1744
BseBI CCWGG 3 cut(s) 555, 1275, 2039
BseCI ATCGAT 1 cut(s) 639
BseDI CCNNGG 4 cut(s) 579, 620, 1274, 2059
BseGI GGATG 9 cut(s) 397, 501, 544, 1142, 1478, 1684, 1741, 2188, 2286
BseJI GATNNNNATC 3 cut(s) 452, 1835, 2187
BseLI CCNNNNNNNGG 6 cut(s) 554, 1449, 1488, 1489, 2065, 2281
BseMII CTCAG 6 cut(s) 93, 658, 1152, 1424, 1478, 2043
BseNI ACTGG 3 cut(s) 487, 1418, 2222
BseRI GAGGAG 1 cut(s) 2336
BseXI GCAGC 5 cut(s) 148, 670, 1559, 2181, 2209
BsgI GTGCAG 2 cut(s) 1354, 1593
Bsh1236I CGCG 2 cut(s) 2148, 2202
BshTI ACCGGT 1 cut(s) 2294
BshVI ATCGAT 1 cut(s) 639
BsiHKAI GWGCWC 1 cut(s) 221
BsiSI CCGG 6 cut(s) 581, 1483, 1745, 1781, 2156, 2295
BslFI GGGAC 5 cut(s) 868, 874, 1009, 1283, 2248
BslI CCNNNNNNNGG 6 cut(s) 554, 1449, 1488, 1489, 2065, 2281
BsmAI GTCTC 4 cut(s) 447, 453, 1037, 1088
BsmFI GGGAC 5 cut(s) 868, 874, 1009, 1283, 2248
BsmI GAATGC 2 cut(s) 787, 1690
Bsp1286I GDGCHC 1 cut(s) 221
Bsp13I TCCGGA 1 cut(s) 1744
Bsp1407I TGTACA 1 cut(s) 2119
BspACI CCGC 7 cut(s) 117, 164, 229, 410, 469, 1255, 2202
BspCNI CTCAG 6 cut(s) 94, 657, 1153, 1425, 1479, 2042
BspDI ATCGAT 1 cut(s) 639
BspEI TCCGGA 1 cut(s) 1744
BspFNI CGCG 2 cut(s) 2148, 2202
BspHI TCATGA 1 cut(s) 64
BspLI GGNNCC 6 cut(s) 196, 890, 1173, 1210, 1441, 1749
BspMAI CTGCAG 1 cut(s) 2199
BspPI GGATC 4 cut(s) 1406, 1635, 1742, 1755
BspQI GCTCTTC 2 cut(s) 89, 1215
BspTI CTTAAG 1 cut(s) 1115
BsrBI CCGCTC 1 cut(s) 229
BsrFI RCCGGY 1 cut(s) 2294
BsrGI TGTACA 1 cut(s) 2119
BsrI ACTGG 3 cut(s) 487, 1418, 2222
BssAI RCCGGY 1 cut(s) 2294
BssECI CCNNGG 4 cut(s) 579, 620, 1274, 2059
BssNI GRCGYC 1 cut(s) 1359
BssT1I CCWWGG 2 cut(s) 620, 2059
Bst2UI CCWGG 3 cut(s) 555, 1275, 2039
Bst4CI ACNGT 2 cut(s) 148, 1591
Bst6I CTCTTC 3 cut(s) 89, 1215, 2325
BstACI GRCGYC 1 cut(s) 1359
BstAFI CTTAAG 1 cut(s) 1115
BstAPI GCANNNNNTGC 1 cut(s) 10
BstAUI TGTACA 1 cut(s) 2119
BstC8I GCNNGC 1 cut(s) 1514
BstF5I GGATG 9 cut(s) 397, 501, 544, 1142, 1478, 1684, 1741, 2188, 2286
BstFNI CGCG 2 cut(s) 2148, 2202
BstH2I RGCGCY 1 cut(s) 1519
BstHHI GCGC 4 cut(s) 564, 1518, 2148, 2202
BstMAI GTCTC 4 cut(s) 447, 453, 1037, 1088
BstMWI GCNNNNNNNGC 4 cut(s) 10, 559, 568, 2099
BstNI CCWGG 3 cut(s) 555, 1275, 2039
BstNSI RCATGY 4 cut(s) 348, 399, 1779, 1935
BstSCI CCNGG 6 cut(s) 553, 579, 1273, 1481, 1780, 2037
BstSFI CTRYAG 1 cut(s) 2195
BstUI CGCG 2 cut(s) 2148, 2202
BstV1I GCAGC 5 cut(s) 148, 670, 1559, 2181, 2209
BstV2I GAAGAC 5 cut(s) 873, 1332, 1538, 1592, 1818
BstX2I RGATCY 5 cut(s) 676, 1164, 1398, 1498, 1747
BstYI RGATCY 5 cut(s) 676, 1164, 1398, 1498, 1747
Bsu15I ATCGAT 1 cut(s) 639
BsuTUI ATCGAT 1 cut(s) 639
BtsCI GGATG 9 cut(s) 397, 501, 544, 1142, 1478, 1684, 1741, 2188, 2286
BtsIMutI CAGTG 2 cut(s) 1369, 1596
Cac8I GCNNGC 1 cut(s) 1514
CaiI CAGNNNCTG 2 cut(s) 1368, 1595
CciI TCATGA 1 cut(s) 64
CfoI GCGC 4 cut(s) 564, 1518, 2148, 2202
Cfr10I RCCGGY 1 cut(s) 2294
Cfr13I GGNCC 3 cut(s) 888, 913, 2073
ClaI ATCGAT 1 cut(s) 639
CsiI ACCWGGT 1 cut(s) 2037
Csp6I GTAC 6 cut(s) 576, 1753, 1765, 2050, 2120, 2298
CspAI ACCGGT 1 cut(s) 2294
CviQI GTAC 6 cut(s) 576, 1753, 1765, 2050, 2120, 2298
DraIII CACNNNGTG 1 cut(s) 2041
Eam1104I CTCTTC 3 cut(s) 89, 1215, 2325
EarI CTCTTC 3 cut(s) 89, 1215, 2325
EciI GGCGGA 2 cut(s) 484, 1270
Eco130I CCWWGG 2 cut(s) 620, 2059
Eco32I GATATC 2 cut(s) 450, 1837
Eco47I GGWCC 3 cut(s) 888, 913, 2073
Eco57I CTGAAG 2 cut(s) 62, 1881
EcoRI GAATTC 1 cut(s) 168
EcoRII CCWGG 3 cut(s) 553, 1273, 2037
EcoRV GATATC 2 cut(s) 450, 1837
EcoT14I CCWWGG 2 cut(s) 620, 2059
EcoT22I ATGCAT 4 cut(s) 307, 397, 501, 1653
ErhI CCWWGG 2 cut(s) 620, 2059
FaqI GGGAC 5 cut(s) 868, 874, 1009, 1283, 2248
FauI CCCGC 2 cut(s) 157, 222
Fnu4HI GCNGC 5 cut(s) 162, 659, 1573, 2195, 2198
FokI GGATG 9 cut(s) 404, 508, 531, 1149, 1465, 1691, 1728, 2195, 2293
Fsp4HI GCNGC 5 cut(s) 162, 659, 1573, 2195, 2198
FspBI CTAG 6 cut(s) 59, 621, 1143, 1355, 1502, 1550
GlaI GCGC 4 cut(s) 563, 1517, 2147, 2201
GluI GCNGC 5 cut(s) 162, 659, 1573, 2195, 2198
HaeII RGCGCY 1 cut(s) 1519
HapII CCGG 6 cut(s) 581, 1483, 1745, 1781, 2156, 2295
HhaI GCGC 4 cut(s) 564, 1518, 2148, 2202
Hin1I GRCGYC 1 cut(s) 1359
Hin6I GCGC 4 cut(s) 562, 1516, 2146, 2200
HinP1I GCGC 4 cut(s) 562, 1516, 2146, 2200
HincII GTYRAC 2 cut(s) 1663, 1903
HindII GTYRAC 2 cut(s) 1663, 1903
HindIII AAGCTT 3 cut(s) 767, 1285, 1841
HpaI GTTAAC 1 cut(s) 1663
HpaII CCGG 6 cut(s) 581, 1483, 1745, 1781, 2156, 2295
HphI GGTGA 7 cut(s) 1816, 1952, 1979, 2027, 2080, 2170, 2284
Hpy166II GTNNAC 8 cut(s) 539, 576, 694, 1602, 1663, 1903, 2076, 2122
Hpy8I GTNNAC 8 cut(s) 539, 576, 694, 1602, 1663, 1903, 2076, 2122
Hpy99I CGWCG 3 cut(s) 210, 1324, 1327
HpyAV CCTTC 9 cut(s) 722, 753, 885, 914, 1001, 1252, 1470, 1613, 2273
HpyCH4III ACNGT 2 cut(s) 148, 1591
HpyCH4IV ACGT 1 cut(s) 1359
HpyF10VI GCNNNNNNNGC 4 cut(s) 10, 559, 568, 2099
HpySE526I ACGT 1 cut(s) 1359
Hsp92I GRCGYC 1 cut(s) 1359
HspAI GCGC 4 cut(s) 562, 1516, 2146, 2200
Kpn2I TCCGGA 1 cut(s) 1744
KspAI GTTAAC 1 cut(s) 1663
LguI GCTCTTC 2 cut(s) 89, 1215
LmnI GCTCC 6 cut(s) 20, 119, 1171, 1452, 1542, 1986
Lsp1109I GCAGC 5 cut(s) 148, 670, 1559, 2181, 2209
MabI ACCWGGT 1 cut(s) 2037
MaeI CTAG 6 cut(s) 59, 621, 1143, 1355, 1502, 1550
MaeII ACGT 1 cut(s) 1359
MaeIII GTNAC 4 cut(s) 485, 1269, 1364, 2290
MbiI CCGCTC 1 cut(s) 229
MfeI CAATTG 3 cut(s) 386, 528, 790
MflI RGATCY 5 cut(s) 676, 1164, 1398, 1498, 1747
MhlI GDGCHC 1 cut(s) 221
MlyI GAGTC 2 cut(s) 1039, 1301
MmeI TCCRAC 1 cut(s) 582
Mph1103I ATGCAT 4 cut(s) 307, 397, 501, 1653
MroI TCCGGA 1 cut(s) 1744
MroXI GAANNNNTTC 2 cut(s) 75, 759
MslI CAYNNNNRTG 2 cut(s) 93, 437
MspA1I CMGCKG 1 cut(s) 661
MspCI CTTAAG 1 cut(s) 1115
MspI CCGG 6 cut(s) 581, 1483, 1745, 1781, 2156, 2295
MspR9I CCNGG 6 cut(s) 555, 581, 1275, 1483, 1782, 2039
MunI CAATTG 3 cut(s) 386, 528, 790
Mva1269I GAATGC 2 cut(s) 787, 1690
MvaI CCWGG 3 cut(s) 555, 1275, 2039
MvnI CGCG 2 cut(s) 2148, 2202
MwoI GCNNNNNNNGC 4 cut(s) 10, 559, 568, 2099
NciI CCSGG 3 cut(s) 581, 1483, 1782
NlaIV GGNNCC 6 cut(s) 196, 890, 1173, 1210, 1441, 1749
NmuCI GTSAC 2 cut(s) 1364, 2290
NsiI ATGCAT 4 cut(s) 307, 397, 501, 1653
NspI RCATGY 4 cut(s) 348, 399, 1779, 1935
PagI TCATGA 1 cut(s) 64
PciI ACATGT 2 cut(s) 1775, 1931
PciSI GCTCTTC 2 cut(s) 89, 1215
PctI GAATGC 2 cut(s) 787, 1690
PdmI GAANNNNTTC 2 cut(s) 75, 759
PfeI GAWTC 9 cut(s) 98, 420, 799, 1192, 1523, 1943, 2054, 2152, 2271
PflFI GACNNNGTC 1 cut(s) 1591
PflMI CCANNNNNTGG 1 cut(s) 2281
PfoI TCCNGGA 1 cut(s) 1780
PinAI ACCGGT 1 cut(s) 2294
PkrI GCNGC 5 cut(s) 163, 660, 1574, 2196, 2199
PleI GAGTC 2 cut(s) 1038, 1300
PpsI GAGTC 2 cut(s) 1038, 1300
PscI ACATGT 2 cut(s) 1775, 1931
PsiI TTATAA 1 cut(s) 1101
Psp6I CCWGG 3 cut(s) 553, 1273, 2037
PspGI CCWGG 3 cut(s) 553, 1273, 2037
PspN4I GGNNCC 6 cut(s) 196, 890, 1173, 1210, 1441, 1749
PspPI GGNCC 3 cut(s) 888, 913, 2073
PstI CTGCAG 1 cut(s) 2199
PstNI CAGNNNCTG 2 cut(s) 1368, 1595
PsuI RGATCY 5 cut(s) 676, 1164, 1398, 1498, 1747
PsyI GACNNNGTC 1 cut(s) 1591
PvuII CAGCTG 1 cut(s) 661
RsaI GTAC 6 cut(s) 577, 1754, 1766, 2051, 2121, 2299
RsaNI GTAC 6 cut(s) 576, 1753, 1765, 2050, 2120, 2298
RseI CAYNNNNRTG 2 cut(s) 93, 437
SapI GCTCTTC 2 cut(s) 89, 1215
SatI GCNGC 5 cut(s) 162, 659, 1573, 2195, 2198
Sau96I GGNCC 3 cut(s) 888, 913, 2073
SchI GAGTC 2 cut(s) 1039, 1301
ScrFI CCNGG 6 cut(s) 555, 581, 1275, 1483, 1782, 2039
SduI GDGCHC 1 cut(s) 221
SexAI ACCWGGT 1 cut(s) 2037
SfcI CTRYAG 1 cut(s) 2195
SinI GGWCC 3 cut(s) 888, 913, 2073
SmiMI CAYNNNNRTG 2 cut(s) 93, 437
SmlI CTYRAG 2 cut(s) 1115, 2097
SmoI CTYRAG 2 cut(s) 1115, 2097
SsiI CCGC 7 cut(s) 117, 164, 229, 410, 469, 1255, 2202
SspMI CTAG 6 cut(s) 59, 621, 1143, 1355, 1502, 1550
StyD4I CCNGG 6 cut(s) 553, 579, 1273, 1481, 1780, 2037
StyI CCWWGG 2 cut(s) 620, 2059
TaaI ACNGT 2 cut(s) 148, 1591
TaiI ACGT 1 cut(s) 1362
TaqI TCGA 8 cut(s) 208, 639, 797, 1026, 1343, 1630, 1829, 2178
TaqII GACCGA 1 cut(s) 1315
TatI WGTACW 1 cut(s) 2119
TfiI GAWTC 9 cut(s) 98, 420, 799, 1192, 1523, 1943, 2054, 2152, 2271
TscAI CASTG 2 cut(s) 1369, 1596
TseFI GTSAC 2 cut(s) 1364, 2290
TseI GCWGC 5 cut(s) 161, 658, 1572, 2194, 2197
Tsp45I GTSAC 2 cut(s) 1364, 2290
TspDTI ATGAA 6 cut(s) 84, 765, 867, 1803, 2099, 2199
TspGWI ACGGA 3 cut(s) 1308, 1740, 2000
TspRI CASTG 2 cut(s) 1369, 1596
Tth111I GACNNNGTC 1 cut(s) 1591
Van91I CCANNNNNTGG 1 cut(s) 2281
Vha464I CTTAAG 1 cut(s) 1115
VpaK11BI GGWCC 3 cut(s) 888, 913, 2073
XapI RAATTY 6 cut(s) 168, 738, 1120, 1182, 1214, 1791
XbaI TCTAGA 2 cut(s) 1501, 1549
XceI RCATGY 4 cut(s) 348, 399, 1779, 1935
XcmI CCANNNNNNNNNTGG 1 cut(s) 954
XmaJI CCTAGG 1 cut(s) 620
XmnI GAANNNNTTC 2 cut(s) 75, 759
XspI CTAG 6 cut(s) 59, 621, 1143, 1355, 1502, 1550
ZraI GACGTC 1 cut(s) 1360
Zsp2I ATGCAT 4 cut(s) 307, 397, 501, 1653
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.