RLG00000013019

RESISTANCE protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
24966951 .. 24970598
3648 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000013019

Sequence Viewer

Length: 3135 bp
ATGTGGAGGAAAGCTGTGACAACCACAGCCAATCTATCTGGGTTTGCTTCACAAGATATTAGGCCTGAGGCTGAATTAGTTGAGGCAATTGTCAATGCTATCTTGATGAAATTGAGTCGTTACTTGTCAATTGACTTAAAAGGACACGTTGGAATTGAATCTCATGTTCAACAGATTGAATCATTGTTATGCATGCACAAACAAGATGTTCACTTTCGCACGGTAGGCATTTGGGGTATGGGTGGTATTGGAAAGACCACCATTGCCGATGCTGTATTTCAAAGATTCTCAACTCAATTCGATACTAGTTCATTTCTTGCGAATGTCAGGGAGAAATCAGAGAAAGATGGATTAGATCATTTACGAAATGAACTTCTTCGTGAGTTATTAGATGAAGAAAATCTAAGTATAGGCACTCCATCTATAGGATCAATTTTTGTTAAAGAGAGACTTTCTCGTACAAAGGTCCTTATTGTTCTTGATGATGTGAGTGATTTAACACATTTAGAATCTTTACCTGGAGATCAAGTTCAGTTTGGTCCTGGAAGTAGAGTCATTGTAACAACTAGAAATAGGTGCGTATTGAAGAAAGTAGTGGATGATGATCATGTGTACAGGGTGATGAAATTAAATTTTGCTGATGCTCTCGAGCTTTTTCAATTGAAAACTTTCAAAGATAACTCTTGTAGAGCAGATTATTCAGACTTGTCCAGAAAGGTGGTAGACTATGCTAAAGGCATCCCTTTAGCTCTAAAAGTTTTGGGTTCTGCATTCCTTCATTGCAATAGCAGAGAAGAGTGGGAAGATGAATTGAAAAAGTTGAAAAAATTTCCCAACAAAGAAATTCATGATGTGTTGAGACTAAGTTATAATCGACTAGAAGAGAATGAGAAGGGGATATTTCTTGATATTGCATATTATCTCAAAGGGGAGAATATTTGTGATGCAAAAAGAATTTTAGAGATACACGGGTTCTGTGCATCACACGGAATTTCAGTTCTGAAGGATATGTCTCTCATATCAATTTCAAAAAATAACCGCTTAAAGATGCATGATTTGGTGCAAGAAATGGGTTGGTTAATTGTTCGTGAAGAATGTAATGAAGAGCCTGGAAAACGGAGCAGGTTGTGGAATGAGGATGCTTATAGAGTACTGAAAAATAATACTGGAACTGCAAAAGTTGAAGCCATGTTCCTGGAGATGTCTAGGATTCCAAAGCTACAATTGAGTCCTGCAGCCTTCAGAAATATGCATAACCTGAAGATGCTAAAAATTTATGCACCAGAAAAAGTGCATGTGGAATCGTCATGGACAAATATGAATACAGAGGAGCAGCAATTAATCTCATTTCCTTTGCTTCATGAGGCTAAACGAGTGCTGTCTTTCTTTGGCAAATCAAATATTTGTAGTTTTTTGAGATTGCGAAAGTTGCACAATTCTCTCTGCGGTTACATTGGAATGACATTCGATTTGGATGGTGACTCTCTCAACAAGTCGCATAGCAAATTGGACCTTCCTGAAGGTCTTGAGTCTCTTCCGGAAGAACTTAGATATCTCCATTGGGATGAATGCCCTTTAAAATCTTTGCCTTCAAAATTTTCTCCAGTCAACCTTGTTGAGCTTCACATGCCCGGTAGCCCAGTTGAGCGACTTTGGAATAATGGCCAGAATCTTGAAAACTTAAAAAGGATGAATCTTAGTAACTGCAAACACTTGACTGAAGTTCCAGATCTCTCTCGGTGCATGAATATTGAGACAATAGATCTTGGTTACTGTGAAAGTTTGGATAAACTTCCTTCCTATTTCAAAACTCTTGACAAGCTTATTCATCTGAATTTGGGCGGCTGCTCACAACTTAAAACTGTTCCTGAAGTACCATGCAATGTGAAATTTCTACGTTTATCTAGGACTGCAGTACAAGATTTACCAACATCGATTTGGTCTCACGAAAAACTTGATATTTTAGCTCTTAGTTATTGTAAACACCTTAAGAATCTCACAAGCACTGCTTGGAAGCTGAACTTGTATGGTGGTGAACAAAATCGAATTGGGCCTCGGGAATTACACTTGTTTGACTGCAAAAACCTTGATTCTCTCCCAGATAGTATCTACAGTTTAAACCGTCTTGAAAGGCTCCATCTCATAGGCTGTGAGAAACTCAAAAGATTGCCTCCCTTCTCAGTTGGTTCGTGCTCTTTGACCAGCATAAACCTCAGTGGCTGCAATCTATTAGAAGTTCCTGATGGTCTCATTGGCCTATCCTCGTTACAAGATATACATCTCAGCGGAACCATGATTGGGAGCGTACCTGCAAGCATCAAAAATGCTTGTCGCCTGCGCAAGCTGTACTTGAACAATTGCAAGAAGCTTCAATCATTACCGGAGCTCCCATTGCTCGTAAGAGTTTTGGAGGCAGATAACTGCACGTCATTGAAGACCGTGGCAAGGAGTTCAAGAACTGCACTTAAGCCACAACGTTGGGATCATCAAGATGTTGAAGCTCTTGATTACTGTCCTCAAGAGAGACTTATGTTCACTAATTGCTTCGAATTGGATAAGAGTTCAAGGAGCAACATATTGAGTGATGCACTGCTCAGAATTATGAGATTGTCATCGTTGTACGATGCTGCAGTTATCAACATAAAAGAATTCATTGTCATATTAGCGGGAAATGTAATTCCAGACTGGTTCAGCTATCGAACGGAGGGATGTCAAATAGATATCAAGTTTCCTCCACATTGGTTCGATACAGGGAACTTCTTGGGTTTCGCTGTATCTGCTGTTTTTGGACTCCAGAGCTTTGATGATGATGATGGCTTTTCCTTGACATGTAAGTGTAGTTTCAAGACCTGCCATGGTGAAGTCTATGAATACAGTTACAAACTACCATGGGTTCAATGTACAATACCCGAAAGTGTCAATTTAGATCAGGTGCTGGCACTCTTCAACAAGTACACATTTTGGCGTGAAGGAAACGACAGCGGAAGTAACCCCATTCCTTTGAACAAGGTCACTGAGGCGTCTTTCCACTTCTACCAAGAAGCAACTCTTTATGAAAATTTGGACAAACTGAAGGTGAAGAAGTGTGGGATCCGAATGTTGTATACCCATGATACTGTCGCTACCACCTCATGA

Protein Analysis

1045

Amino Acids

118.79

Weight (kDa)

7.01

Isoelectric Point (pI)

41.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 53 - 228 1e-19 NB-ARC domain
WHD_ROQ1 PF23282 294 - 365 8e-18 Disease resistance protein Roq1-like, winged-helix domain
C-JID PF20160 889 - 1038 1.9e-15 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 870
Acc16I TGCGCA 1 cut(s) 2339
Acc36I ACCTGC 3 cut(s) 1113, 2317, 2858
AccI GTMKAC 2 cut(s) 723, 3104
AccIII TCCGGA 1 cut(s) 1537
AciI CCGC 6 cut(s) 1039, 1446, 1842, 2286, 2666, 2982
AclI AACGTT 1 cut(s) 2476
AclWI GGATC 4 cut(s) 436, 2490, 3085, 3098
AcoI YGGCCR 1 cut(s) 1663
AcuI CTGAAG 7 cut(s) 1022, 1225, 1280, 1539, 1740, 1890, 3092
AcyI GRCGYC 1 cut(s) 3020
AfiI CCNNNNNNNGG 3 cut(s) 425, 2298, 2445
AflII CTTAAG 2 cut(s) 1988, 2465
AflIII ACRYGT 2 cut(s) 145, 2828
AhlI ACTAGT 1 cut(s) 305
AjiI CACGTC 1 cut(s) 2427
AjnI CCWGG 4 cut(s) 517, 541, 1108, 1194
AloI GAACNNNNNNTCC 4 cut(s) 513, 545, 981, 1013
Alw21I GWGCWC 2 cut(s) 2195, 2388
Alw26I GTCTC 8 cut(s) 442, 853, 1017, 1536, 1748, 1947, 2252, 2518
AlwI GGATC 4 cut(s) 436, 2490, 3085, 3098
AlwNI CAGNNNCTG 2 cut(s) 2220, 2935
Ama87I CYCGRG 2 cut(s) 647, 2055
Aor13HI TCCGGA 1 cut(s) 1537
AoxI GGCC 4 cut(s) 62, 1663, 2051, 2254
ApeKI GCWGC 5 cut(s) 1235, 1333, 1845, 2220, 2627
ArsI GACNNNNNNTTYG 2 cut(s) 1453, 1485
AseI ATTAAT 1 cut(s) 1340
Asp700I GAANNNNTTC 2 cut(s) 375, 668
AspLEI GCGC 1 cut(s) 2340
AspS9I GGNCC 4 cut(s) 466, 539, 1510, 2051
AsuC2I CCSGG 1 cut(s) 1632
AsuHPI GGTGA 5 cut(s) 631, 1490, 2045, 2870, 3088
AsuII TTCGAA 1 cut(s) 2547
AvaI CYCGRG 2 cut(s) 647, 2055
AvaII GGWCC 3 cut(s) 466, 539, 1510
AxyI CCTNAGG 1 cut(s) 66
BaeI ACNNNNGTAYC 2 cut(s) 956, 989
BalI TGGCCA 1 cut(s) 1665
BamHI GGATCC 1 cut(s) 3090
BanII GRGCYC 1 cut(s) 2388
BbsI GAAGAC 1 cut(s) 2441
Bbv12I GWGCWC 2 cut(s) 2195, 2388
BbvI GCAGC 5 cut(s) 1247, 1345, 1832, 2207, 2614
BccI CCATC 6 cut(s) 341, 427, 1469, 2145, 2237, 2807
BciT130I CCWGG 4 cut(s) 519, 543, 1110, 1196
BclI TGATCA 1 cut(s) 604
BcnI CCSGG 1 cut(s) 1632
BcoDI GTCTC 8 cut(s) 442, 853, 1017, 1536, 1748, 1947, 2252, 2518
BcuI ACTAGT 1 cut(s) 305
BfaI CTAG 5 cut(s) 306, 567, 878, 1206, 1905
BfmI CTRYAG 5 cut(s) 423, 1233, 1911, 2110, 2628
BfrI CTTAAG 2 cut(s) 1988, 2465
BfuAI ACCTGC 3 cut(s) 1113, 2317, 2858
BglII AGATCT 2 cut(s) 1729, 1762
BisI GCNGC 6 cut(s) 1236, 1334, 1843, 1846, 2221, 2628
BlsI GCNGC 6 cut(s) 1237, 1335, 1844, 1847, 2222, 2629
BmcAI AGTACT 1 cut(s) 1152
Bme1390I CCNGG 5 cut(s) 519, 543, 1110, 1196, 1632
Bme18I GGWCC 3 cut(s) 466, 539, 1510
BmeT110I CYCGRG 2 cut(s) 647, 2055
BmgBI CACGTC 1 cut(s) 2427
BmgT120I GGNCC 4 cut(s) 466, 539, 1510, 2051
BmiI GGNNCC 3 cut(s) 2135, 2290, 3092
BmrFI CCNGG 5 cut(s) 519, 543, 1110, 1196, 1632
BmrI ACTGGG 1 cut(s) 1634
BmuI ACTGGG 1 cut(s) 1634
BpiI GAAGAC 1 cut(s) 2441
BplI GAGNNNNNCTC 2 cut(s) 439, 471
BpmI CTGGAG 4 cut(s) 540, 1217, 1587, 2777
Bpu14I TTCGAA 1 cut(s) 2547
BpuEI CTTGAG 2 cut(s) 1547, 2502
BpuMI CCSGG 1 cut(s) 1632
Bsa29I ATCGAT 1 cut(s) 1934
BsaBI GATNNNNATC 3 cut(s) 603, 2277, 2611
BsaHI GRCGYC 1 cut(s) 3020
BsaI GGTCTC 2 cut(s) 1947, 2252
BsaJI CCNNGG 4 cut(s) 2054, 2439, 2854, 2888
BsaWI WCCGGW 2 cut(s) 1537, 2380
BsaXI ACNNNNNCTCC 4 cut(s) 513, 543, 2370, 2400
Bsc4I CCNNNNNNNGG 3 cut(s) 425, 2298, 2445
Bse1I ACTGG 4 cut(s) 1171, 1604, 1640, 2690
Bse21I CCTNAGG 1 cut(s) 66
Bse3DI GCAATG 4 cut(s) 261, 778, 1888, 2390
Bse8I GATNNNNATC 3 cut(s) 603, 2277, 2611
BseAI TCCGGA 1 cut(s) 1537
BseBI CCWGG 4 cut(s) 519, 543, 1110, 1196
BseCI ATCGAT 1 cut(s) 1934
BseDI CCNNGG 4 cut(s) 2054, 2439, 2854, 2888
BseGI GGATG 7 cut(s) 604, 738, 1144, 1480, 1570, 1695, 2714
BseJI GATNNNNATC 3 cut(s) 603, 2277, 2611
BseLI CCNNNNNNNGG 3 cut(s) 425, 2298, 2445
BseMI GCAATG 4 cut(s) 261, 778, 1888, 2390
BseMII CTCAG 6 cut(s) 57, 2193, 2227, 2296, 2608, 3006
BseNI ACTGG 4 cut(s) 1171, 1604, 1640, 2690
BseRI GAGGAG 1 cut(s) 1343
BseXI GCAGC 5 cut(s) 1247, 1345, 1832, 2207, 2614
BsgI GTGCAG 2 cut(s) 2407, 2445
BshFI GGCC 4 cut(s) 64, 1665, 2053, 2256
BshVI ATCGAT 1 cut(s) 1934
BsiHKAI GWGCWC 2 cut(s) 2195, 2388
BsiHKCI CYCGRG 2 cut(s) 647, 2055
BsiSI CCGG 3 cut(s) 1538, 1632, 2381
BslI CCNNNNNNNGG 3 cut(s) 425, 2298, 2445
BsmAI GTCTC 8 cut(s) 442, 853, 1017, 1536, 1748, 1947, 2252, 2518
BsmI GAATGC 2 cut(s) 770, 1574
BsnI GGCC 4 cut(s) 64, 1665, 2053, 2256
Bso31I GGTCTC 2 cut(s) 1947, 2252
BsoBI CYCGRG 2 cut(s) 647, 2055
Bsp119I TTCGAA 1 cut(s) 2547
Bsp1286I GDGCHC 2 cut(s) 2195, 2388
Bsp13I TCCGGA 1 cut(s) 1537
Bsp1407I TGTACA 2 cut(s) 612, 2900
Bsp143I GATC 9 cut(s) 355, 428, 523, 604, 1729, 1762, 2482, 2926, 3090
Bsp19I CCATGG 2 cut(s) 2854, 2888
BspACI CCGC 6 cut(s) 1039, 1446, 1842, 2286, 2666, 2982
BspANI GGCC 4 cut(s) 64, 1665, 2053, 2256
BspCNI CTCAG 6 cut(s) 58, 2192, 2226, 2295, 2607, 3007
BspDI ATCGAT 1 cut(s) 1934
BspEI TCCGGA 1 cut(s) 1537
BspHI TCATGA 3 cut(s) 847, 1360, 3131
BspLI GGNNCC 3 cut(s) 2135, 2290, 3092
BspMAI CTGCAG 3 cut(s) 1237, 1915, 2632
BspMI ACCTGC 3 cut(s) 1113, 2317, 2858
BspPI GGATC 4 cut(s) 436, 2490, 3085, 3098
BspQI GCTCTTC 1 cut(s) 1098
BspT104I TTCGAA 1 cut(s) 2547
BspTI CTTAAG 2 cut(s) 1988, 2465
BspTNI GGTCTC 2 cut(s) 1947, 2252
BsrDI GCAATG 4 cut(s) 261, 778, 1888, 2390
BsrGI TGTACA 2 cut(s) 612, 2900
BsrI ACTGG 4 cut(s) 1171, 1604, 1640, 2690
BssECI CCNNGG 4 cut(s) 2054, 2439, 2854, 2888
BssMI GATC 9 cut(s) 355, 428, 523, 604, 1729, 1762, 2482, 2926, 3090
BssNAI GTATAC 1 cut(s) 3105
BssNI GRCGYC 1 cut(s) 3020
BssT1I CCWWGG 2 cut(s) 2854, 2888
Bst1107I GTATAC 1 cut(s) 3105
Bst2UI CCWGG 4 cut(s) 519, 543, 1110, 1196
Bst4CI ACNGT 9 cut(s) 223, 1775, 1864, 2114, 2123, 2440, 2513, 2876, 3118
Bst6I CTCTTC 5 cut(s) 789, 876, 1098, 1539, 2948
BstACI GRCGYC 1 cut(s) 3020
BstAFI CTTAAG 2 cut(s) 1988, 2465
BstAUI TGTACA 2 cut(s) 612, 2900
BstBI TTCGAA 1 cut(s) 2547
BstC8I GCNNGC 5 cut(s) 194, 2314, 2336, 2342, 2937
BstDSI CCRYGG 3 cut(s) 2439, 2854, 2888
BstF5I GGATG 7 cut(s) 604, 738, 1144, 1480, 1570, 1695, 2714
BstHHI GCGC 1 cut(s) 2340
BstKTI GATC 9 cut(s) 358, 431, 526, 607, 1732, 1765, 2485, 2929, 3093
BstMAI GTCTC 8 cut(s) 442, 853, 1017, 1536, 1748, 1947, 2252, 2518
BstMBI GATC 9 cut(s) 355, 428, 523, 604, 1729, 1762, 2482, 2926, 3090
BstMWI GCNNNNNNNGC 5 cut(s) 225, 1429, 1627, 2392, 2777
BstNI CCWGG 4 cut(s) 519, 543, 1110, 1196
BstNSI RCATGY 4 cut(s) 196, 1298, 1630, 2832
BstSCI CCNGG 5 cut(s) 517, 541, 1108, 1194, 1630
BstSFI CTRYAG 5 cut(s) 423, 1233, 1911, 2110, 2628
BstV1I GCAGC 5 cut(s) 1247, 1345, 1832, 2207, 2614
BstV2I GAAGAC 1 cut(s) 2441
BstX2I RGATCY 3 cut(s) 1729, 1762, 3090
BstXI CCANNNNNNTGG 3 cut(s) 718, 1195, 2478
BstYI RGATCY 3 cut(s) 1729, 1762, 3090
BstZ17I GTATAC 1 cut(s) 3105
Bsu15I ATCGAT 1 cut(s) 1934
Bsu36I CCTNAGG 1 cut(s) 66
BsuRI GGCC 4 cut(s) 64, 1665, 2053, 2256
BsuTUI ATCGAT 1 cut(s) 1934
BtgI CCRYGG 3 cut(s) 2439, 2854, 2888
BtrI CACGTC 1 cut(s) 2427
BtsCI GGATG 7 cut(s) 604, 738, 1144, 1480, 1570, 1695, 2714
BtsI GCAGTG 2 cut(s) 2004, 2588
BtsIMutI CAGTG 4 cut(s) 2004, 2221, 2588, 3012
BveI ACCTGC 3 cut(s) 1113, 2317, 2858
Cac8I GCNNGC 5 cut(s) 194, 2314, 2336, 2342, 2937
CaiI CAGNNNCTG 2 cut(s) 2220, 2935
CciI TCATGA 3 cut(s) 847, 1360, 3131
CfoI GCGC 1 cut(s) 2340
Cfr13I GGNCC 4 cut(s) 466, 539, 1510, 2051
ClaI ATCGAT 1 cut(s) 1934
CseI GACGC 1 cut(s) 3009
DpnI GATC 9 cut(s) 357, 430, 525, 606, 1731, 1764, 2484, 2928, 3092
DpnII GATC 9 cut(s) 355, 428, 523, 604, 1729, 1762, 2482, 2926, 3090
DraI TTTAAA 2 cut(s) 1578, 2118
EaeI YGGCCR 1 cut(s) 1663
Eam1104I CTCTTC 5 cut(s) 789, 876, 1098, 1539, 2948
EarI CTCTTC 5 cut(s) 789, 876, 1098, 1539, 2948
Ecl136II GAGCTC 1 cut(s) 2386
Eco130I CCWWGG 2 cut(s) 2854, 2888
Eco147I AGGCCT 1 cut(s) 64
Eco24I GRGCYC 1 cut(s) 2388
Eco31I GGTCTC 2 cut(s) 1947, 2252
Eco32I GATATC 2 cut(s) 1553, 2722
Eco47I GGWCC 3 cut(s) 466, 539, 1510
Eco53kI GAGCTC 1 cut(s) 2386
Eco57I CTGAAG 7 cut(s) 1022, 1225, 1280, 1539, 1740, 1890, 3092
Eco81I CCTNAGG 1 cut(s) 66
Eco88I CYCGRG 2 cut(s) 647, 2055
EcoICRI GAGCTC 1 cut(s) 2386
EcoO109I RGGNCCY 1 cut(s) 466
EcoRI GAATTC 1 cut(s) 2648
EcoRII CCWGG 4 cut(s) 517, 541, 1108, 1194
EcoRV GATATC 2 cut(s) 1553, 2722
EcoT14I CCWWGG 2 cut(s) 2854, 2888
EcoT22I ATGCAT 3 cut(s) 194, 1053, 1254
EcoT38I GRGCYC 1 cut(s) 2388
ErhI CCWWGG 2 cut(s) 2854, 2888
FauI CCCGC 1 cut(s) 2659
FbaI TGATCA 1 cut(s) 604
FblI GTMKAC 2 cut(s) 723, 3104
Fnu4HI GCNGC 6 cut(s) 1236, 1334, 1843, 1846, 2221, 2628
FokI GGATG 7 cut(s) 611, 725, 1151, 1487, 1577, 1702, 2721
FriOI GRGCYC 1 cut(s) 2388
Fsp4HI GCNGC 6 cut(s) 1236, 1334, 1843, 1846, 2221, 2628
FspBI CTAG 5 cut(s) 306, 567, 878, 1206, 1905
FspI TGCGCA 1 cut(s) 2339
GlaI GCGC 1 cut(s) 2339
GluI GCNGC 6 cut(s) 1236, 1334, 1843, 1846, 2221, 2628
GsuI CTGGAG 4 cut(s) 540, 1217, 1587, 2777
HaeIII GGCC 4 cut(s) 64, 1665, 2053, 2256
HapII CCGG 3 cut(s) 1538, 1632, 2381
HgaI GACGC 1 cut(s) 3009
HhaI GCGC 1 cut(s) 2340
Hin1I GRCGYC 1 cut(s) 3020
Hin6I GCGC 1 cut(s) 2338
HinP1I GCGC 1 cut(s) 2338
HincII GTYRAC 1 cut(s) 1609
HindII GTYRAC 1 cut(s) 1609
HindIII AAGCTT 2 cut(s) 1820, 2366
HpaII CCGG 3 cut(s) 1538, 1632, 2381
HphI GGTGA 5 cut(s) 631, 1490, 2045, 2870, 3088
Hpy166II GTNNAC 9 cut(s) 211, 613, 724, 1609, 1982, 2036, 2535, 2955, 3105
Hpy188I TCNGA 7 cut(s) 340, 703, 1002, 1244, 1833, 2597, 3095
Hpy8I GTNNAC 9 cut(s) 211, 613, 724, 1609, 1982, 2036, 2535, 2955, 3105
HpyCH4III ACNGT 9 cut(s) 223, 1775, 1864, 2114, 2123, 2440, 2513, 2876, 3118
HpyCH4IV ACGT 4 cut(s) 147, 1897, 2426, 2476
HpyF10VI GCNNNNNNNGC 5 cut(s) 225, 1429, 1627, 2392, 2777
HpySE526I ACGT 4 cut(s) 147, 1897, 2426, 2476
Hsp92I GRCGYC 1 cut(s) 3020
HspAI GCGC 1 cut(s) 2338
Kpn2I TCCGGA 1 cut(s) 1537
Ksp22I TGATCA 1 cut(s) 604
Kzo9I GATC 9 cut(s) 355, 428, 523, 604, 1729, 1762, 2482, 2926, 3090
LguI GCTCTTC 1 cut(s) 1098
LmnI GCTCC 7 cut(s) 1119, 1330, 2139, 2301, 2383, 2391, 2568
Lsp1109I GCAGC 5 cut(s) 1247, 1345, 1832, 2207, 2614
MaeI CTAG 5 cut(s) 306, 567, 878, 1206, 1905
MaeII ACGT 4 cut(s) 147, 1897, 2426, 2476
MalI GATC 9 cut(s) 357, 430, 525, 606, 1731, 1764, 2484, 2928, 3092
MboI GATC 9 cut(s) 355, 428, 523, 604, 1729, 1762, 2482, 2926, 3090
MfeI CAATTG 5 cut(s) 87, 129, 659, 1223, 2356
MflI RGATCY 3 cut(s) 1729, 1762, 3090
MhlI GDGCHC 2 cut(s) 2195, 2388
MlsI TGGCCA 1 cut(s) 1665
MluNI TGGCCA 1 cut(s) 1665
MlyI GAGTC 6 cut(s) 124, 561, 1237, 1475, 1538, 2784
MmeI TCCRAC 1 cut(s) 130
Mox20I TGGCCA 1 cut(s) 1665
Mph1103I ATGCAT 3 cut(s) 194, 1053, 1254
MroI TCCGGA 1 cut(s) 1537
MroXI GAANNNNTTC 2 cut(s) 375, 668
MscI TGGCCA 1 cut(s) 1665
MslI CAYNNNNRTG 5 cut(s) 187, 1457, 1563, 2490, 2833
Msp20I TGGCCA 1 cut(s) 1665
MspA1I CMGCKG 2 cut(s) 2286, 2982
MspCI CTTAAG 2 cut(s) 1988, 2465
MspI CCGG 3 cut(s) 1538, 1632, 2381
MspR9I CCNGG 5 cut(s) 519, 543, 1110, 1196, 1632
MssI GTTTAAAC 1 cut(s) 2118
MunI CAATTG 5 cut(s) 87, 129, 659, 1223, 2356
Mva1269I GAATGC 2 cut(s) 770, 1574
MvaI CCWGG 4 cut(s) 519, 543, 1110, 1196
MwoI GCNNNNNNNGC 5 cut(s) 225, 1429, 1627, 2392, 2777
NciI CCSGG 1 cut(s) 1632
NcoI CCATGG 2 cut(s) 2854, 2888
NdeII GATC 9 cut(s) 355, 428, 523, 604, 1729, 1762, 2482, 2926, 3090
NlaIV GGNNCC 3 cut(s) 2135, 2290, 3092
NmuCI GTSAC 3 cut(s) 16, 1478, 3010
NsbI TGCGCA 1 cut(s) 2339
NsiI ATGCAT 3 cut(s) 194, 1053, 1254
NspI RCATGY 4 cut(s) 196, 1298, 1630, 2832
NspV TTCGAA 1 cut(s) 2547
PaeI GCATGC 1 cut(s) 196
PaeR7I CTCGAG 1 cut(s) 647
PagI TCATGA 3 cut(s) 847, 1360, 3131
PceI AGGCCT 1 cut(s) 64
PciI ACATGT 1 cut(s) 2828
PciSI GCTCTTC 1 cut(s) 1098
PctI GAATGC 2 cut(s) 770, 1574
PdmI GAANNNNTTC 2 cut(s) 375, 668
PfoI TCCNGGA 2 cut(s) 541, 1194
PkrI GCNGC 6 cut(s) 1237, 1335, 1844, 1847, 2222, 2629
PleI GAGTC 6 cut(s) 123, 560, 1236, 1475, 1537, 2784
PmeI GTTTAAAC 1 cut(s) 2118
PpsI GAGTC 6 cut(s) 123, 560, 1236, 1475, 1537, 2784
PpuMI RGGWCCY 1 cut(s) 466
PscI ACATGT 1 cut(s) 2828
PshBI ATTAAT 1 cut(s) 1340
PsiI TTATAA 1 cut(s) 870
Psp124BI GAGCTC 1 cut(s) 2388
Psp1406I AACGTT 1 cut(s) 2476
Psp5II RGGWCCY 1 cut(s) 466
Psp6I CCWGG 4 cut(s) 517, 541, 1108, 1194
PspGI CCWGG 4 cut(s) 517, 541, 1108, 1194
PspN4I GGNNCC 3 cut(s) 2135, 2290, 3092
PspPI GGNCC 4 cut(s) 466, 539, 1510, 2051
PspPPI RGGWCCY 1 cut(s) 466
PstI CTGCAG 3 cut(s) 1237, 1915, 2632
PstNI CAGNNNCTG 2 cut(s) 2220, 2935
PsuI RGATCY 3 cut(s) 1729, 1762, 3090
RseI CAYNNNNRTG 5 cut(s) 187, 1457, 1563, 2490, 2833
SacI GAGCTC 1 cut(s) 2388
SapI GCTCTTC 1 cut(s) 1098
SatI GCNGC 6 cut(s) 1236, 1334, 1843, 1846, 2221, 2628
Sau3AI GATC 9 cut(s) 355, 428, 523, 604, 1729, 1762, 2482, 2926, 3090
Sau96I GGNCC 4 cut(s) 466, 539, 1510, 2051
ScaI AGTACT 1 cut(s) 1152
SchI GAGTC 6 cut(s) 124, 561, 1237, 1475, 1538, 2784
ScrFI CCNGG 5 cut(s) 519, 543, 1110, 1196, 1632
SduI GDGCHC 2 cut(s) 2195, 2388
SfcI CTRYAG 5 cut(s) 423, 1233, 1911, 2110, 2628
Sfr274I CTCGAG 1 cut(s) 647
SfuI TTCGAA 1 cut(s) 2547
SinI GGWCC 3 cut(s) 466, 539, 1510
SlaI CTCGAG 1 cut(s) 647
SmiMI CAYNNNNRTG 5 cut(s) 187, 1457, 1563, 2490, 2833
SmlI CTYRAG 5 cut(s) 647, 1526, 1988, 2465, 2517
SmoI CTYRAG 5 cut(s) 647, 1526, 1988, 2465, 2517
SpeI ACTAGT 1 cut(s) 305
SphI GCATGC 1 cut(s) 196
SseBI AGGCCT 1 cut(s) 64
SsiI CCGC 6 cut(s) 1039, 1446, 1842, 2286, 2666, 2982
SspI AATATT 3 cut(s) 937, 1402, 1750
SspMI CTAG 5 cut(s) 306, 567, 878, 1206, 1905
SstI GAGCTC 1 cut(s) 2388
StuI AGGCCT 1 cut(s) 64
StyD4I CCNGG 5 cut(s) 517, 541, 1108, 1194, 1630
StyI CCWWGG 2 cut(s) 2854, 2888
TaaI ACNGT 9 cut(s) 223, 1775, 1864, 2114, 2123, 2440, 2513, 2876, 3118
TaiI ACGT 4 cut(s) 150, 1900, 2429, 2479
TaqI TCGA 9 cut(s) 300, 648, 874, 1467, 1934, 2044, 2547, 2698, 2745
TatI WGTACW 6 cut(s) 612, 1150, 1915, 2346, 2900, 2952
TauI GCSGC 1 cut(s) 1845
TscAI CASTG 4 cut(s) 2011, 2221, 2595, 3019
TseFI GTSAC 3 cut(s) 16, 1478, 3010
TseI GCWGC 5 cut(s) 1235, 1333, 1845, 2220, 2627
Tsp45I GTSAC 3 cut(s) 16, 1478, 3010
TspGWI ACGGA 3 cut(s) 1002, 1132, 2717
TspRI CASTG 4 cut(s) 2011, 2221, 2595, 3019
Vha464I CTTAAG 2 cut(s) 1988, 2465
VpaK11BI GGWCC 3 cut(s) 466, 539, 1510
VspI ATTAAT 1 cut(s) 1340
XceI RCATGY 4 cut(s) 196, 1298, 1630, 2832
XcmI CCANNNNNNNNNTGG 1 cut(s) 1935
XhoI CTCGAG 1 cut(s) 647
XmiI GTMKAC 2 cut(s) 723, 3104
XmnI GAANNNNTTC 2 cut(s) 375, 668
XspI CTAG 5 cut(s) 306, 567, 878, 1206, 1905
ZrmI AGTACT 1 cut(s) 1152
Zsp2I ATGCAT 3 cut(s) 194, 1053, 1254
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.