TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 277 |
| AciI | CCGC | 1 cut(s) | 1257 |
| AcsI | RAATTY | 2 cut(s) | 189, 217 |
| AcuI | CTGAAG | 6 cut(s) | 63, 256, 326, 368, 434, 698 |
| AcvI | CACGTG | 1 cut(s) | 956 |
| AfaI | GTAC | 3 cut(s) | 881, 1039, 1097 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 889, 1149 |
| AflIII | ACRYGT | 1 cut(s) | 1326 |
| AgsI | TTSAA | 7 cut(s) | 29, 88, 217, 1196, 1208, 1253, 1273 |
| AjiI | CACGTC | 1 cut(s) | 966 |
| AjnI | CCWGG | 4 cut(s) | 736, 802, 816, 882 |
| Alw21I | GWGCWC | 6 cut(s) | 336, 402, 468, 534, 666, 798 |
| Alw26I | GTCTC | 3 cut(s) | 167, 968, 1174 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 817, 883 |
| Ama87I | CYCGRG | 1 cut(s) | 1004 |
| AoxI | GGCC | 2 cut(s) | 301, 1074 |
| ApeKI | GCWGC | 7 cut(s) | 355, 421, 808, 874, 925, 960, 1262 |
| ApoI | RAATTY | 2 cut(s) | 189, 217 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1296 |
| AspS9I | GGNCC | 2 cut(s) | 49, 814 |
| AsuC2I | CCSGG | 2 cut(s) | 1005, 1006 |
| AsuHPI | GGTGA | 1 cut(s) | 1165 |
| AvaI | CYCGRG | 1 cut(s) | 1004 |
| AvaII | GGWCC | 2 cut(s) | 49, 814 |
| BanII | GRGCYC | 6 cut(s) | 336, 402, 468, 534, 666, 798 |
| BbrPI | CACGTG | 1 cut(s) | 956 |
| BbsI | GAAGAC | 7 cut(s) | 164, 305, 437, 503, 569, 635, 701 |
| Bbv12I | GWGCWC | 6 cut(s) | 336, 402, 468, 534, 666, 798 |
| BbvI | GCAGC | 7 cut(s) | 342, 408, 795, 861, 912, 947, 1249 |
| BccI | CCATC | 2 cut(s) | 197, 235 |
| BceAI | ACGGC | 1 cut(s) | 1303 |
| BciT130I | CCWGG | 4 cut(s) | 738, 804, 818, 884 |
| BclI | TGATCA | 1 cut(s) | 693 |
| BcnI | CCSGG | 2 cut(s) | 1005, 1006 |
| BcoDI | GTCTC | 3 cut(s) | 167, 968, 1174 |
| BfaI | CTAG | 1 cut(s) | 971 |
| BfmI | CTRYAG | 3 cut(s) | 194, 809, 875 |
| BisI | GCNGC | 7 cut(s) | 356, 422, 809, 875, 926, 961, 1263 |
| BlsI | GCNGC | 7 cut(s) | 357, 423, 810, 876, 927, 962, 1264 |
| Bme1390I | CCNGG | 6 cut(s) | 738, 804, 818, 884, 1005, 1006 |
| Bme18I | GGWCC | 2 cut(s) | 49, 814 |
| BmeT110I | CYCGRG | 1 cut(s) | 1004 |
| BmgBI | CACGTC | 1 cut(s) | 966 |
| BmgT120I | GGNCC | 2 cut(s) | 49, 814 |
| BmiI | GGNNCC | 1 cut(s) | 1236 |
| BmrFI | CCNGG | 6 cut(s) | 738, 804, 818, 884, 1005, 1006 |
| BmsI | GCATC | 3 cut(s) | 84, 940, 1076 |
| BpiI | GAAGAC | 7 cut(s) | 164, 305, 437, 503, 569, 635, 701 |
| BpuEI | CTTGAG | 6 cut(s) | 98, 141, 149, 162, 302, 844 |
| BpuMI | CCSGG | 2 cut(s) | 1005, 1006 |
| BsaAI | YACGTR | 1 cut(s) | 956 |
| BsaI | GGTCTC | 1 cut(s) | 167 |
| BsaJI | CCNNGG | 5 cut(s) | 737, 803, 929, 1004, 1071 |
| BsaWI | WCCGGW | 1 cut(s) | 129 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 889, 1149 |
| Bse1I | ACTGG | 2 cut(s) | 69, 756 |
| BseBI | CCWGG | 4 cut(s) | 738, 804, 818, 884 |
| BseDI | CCNNGG | 5 cut(s) | 737, 803, 929, 1004, 1071 |
| BseGI | GGATG | 2 cut(s) | 208, 1067 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 889, 1149 |
| BseNI | ACTGG | 2 cut(s) | 69, 756 |
| BseXI | GCAGC | 7 cut(s) | 342, 408, 795, 861, 912, 947, 1249 |
| BsgI | GTGCAG | 2 cut(s) | 946, 984 |
| BshFI | GGCC | 2 cut(s) | 303, 1076 |
| BsiHKAI | GWGCWC | 6 cut(s) | 336, 402, 468, 534, 666, 798 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1004 |
| BsiSI | CCGG | 2 cut(s) | 130, 1005 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 889, 1149 |
| BsmAI | GTCTC | 3 cut(s) | 167, 968, 1174 |
| BsmI | GAATGC | 1 cut(s) | 35 |
| BsnI | GGCC | 2 cut(s) | 303, 1076 |
| Bso31I | GGTCTC | 1 cut(s) | 167 |
| BsoBI | CYCGRG | 1 cut(s) | 1004 |
| Bsp1286I | GDGCHC | 6 cut(s) | 336, 402, 468, 534, 666, 798 |
| Bsp143I | GATC | 9 cut(s) | 317, 449, 515, 581, 647, 693, 713, 1018, 1028 |
| Bsp19I | CCATGG | 1 cut(s) | 929 |
| BspACI | CCGC | 1 cut(s) | 1257 |
| BspANI | GGCC | 2 cut(s) | 303, 1076 |
| BspHI | TCATGA | 1 cut(s) | 39 |
| BspLI | GGNNCC | 1 cut(s) | 1236 |
| BspMAI | CTGCAG | 3 cut(s) | 198, 813, 879 |
| BspTNI | GGTCTC | 1 cut(s) | 167 |
| BsrI | ACTGG | 2 cut(s) | 69, 756 |
| BssECI | CCNNGG | 5 cut(s) | 737, 803, 929, 1004, 1071 |
| BssMI | GATC | 9 cut(s) | 317, 449, 515, 581, 647, 693, 713, 1018, 1028 |
| BssT1I | CCWWGG | 1 cut(s) | 929 |
| Bst2UI | CCWGG | 4 cut(s) | 738, 804, 818, 884 |
| Bst4CI | ACNGT | 1 cut(s) | 1147 |
| Bst6I | CTCTTC | 1 cut(s) | 302 |
| BstBAI | YACGTR | 1 cut(s) | 956 |
| BstDEI | CTNAG | 4 cut(s) | 34, 104, 185, 1132 |
| BstDSI | CCRYGG | 1 cut(s) | 929 |
| BstF5I | GGATG | 2 cut(s) | 208, 1067 |
| BstKTI | GATC | 9 cut(s) | 320, 452, 518, 584, 650, 696, 716, 1021, 1031 |
| BstMAI | GTCTC | 3 cut(s) | 167, 968, 1174 |
| BstMBI | GATC | 9 cut(s) | 317, 449, 515, 581, 647, 693, 713, 1018, 1028 |
| BstNI | CCWGG | 4 cut(s) | 738, 804, 818, 884 |
| BstNSI | RCATGY | 1 cut(s) | 1330 |
| BstSCI | CCNGG | 6 cut(s) | 736, 802, 816, 882, 1003, 1004 |
| BstSFI | CTRYAG | 3 cut(s) | 194, 809, 875 |
| BstV1I | GCAGC | 7 cut(s) | 342, 408, 795, 861, 912, 947, 1249 |
| BstV2I | GAAGAC | 7 cut(s) | 164, 305, 437, 503, 569, 635, 701 |
| BsuRI | GGCC | 2 cut(s) | 303, 1076 |
| BtgI | CCRYGG | 1 cut(s) | 929 |
| BtrI | CACGTC | 1 cut(s) | 966 |
| BtsCI | GGATG | 2 cut(s) | 208, 1067 |
| BtsI | GCAGTG | 1 cut(s) | 203 |
| BtsIMutI | CAGTG | 2 cut(s) | 203, 1143 |
| CaiI | CAGNNNCTG | 2 cut(s) | 817, 883 |
| CciI | TCATGA | 1 cut(s) | 39 |
| Cfr13I | GGNCC | 2 cut(s) | 49, 814 |
| Cfr9I | CCCGGG | 1 cut(s) | 1004 |
| Csp6I | GTAC | 3 cut(s) | 880, 1038, 1096 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1088, 1123 |
| CviAII | CATG | 5 cut(s) | 40, 46, 930, 1090, 1327 |
| CviQI | GTAC | 3 cut(s) | 880, 1038, 1096 |
| DdeI | CTNAG | 4 cut(s) | 34, 104, 185, 1132 |
| DpnI | GATC | 9 cut(s) | 319, 451, 517, 583, 649, 695, 715, 1020, 1030 |
| DpnII | GATC | 9 cut(s) | 317, 449, 515, 581, 647, 693, 713, 1018, 1028 |
| Eam1104I | CTCTTC | 1 cut(s) | 302 |
| EarI | CTCTTC | 1 cut(s) | 302 |
| Ecl136II | GAGCTC | 6 cut(s) | 334, 400, 466, 532, 664, 796 |
| Eco130I | CCWWGG | 1 cut(s) | 929 |
| Eco147I | AGGCCT | 2 cut(s) | 303, 1076 |
| Eco24I | GRGCYC | 6 cut(s) | 336, 402, 468, 534, 666, 798 |
| Eco31I | GGTCTC | 1 cut(s) | 167 |
| Eco47I | GGWCC | 2 cut(s) | 49, 814 |
| Eco53kI | GAGCTC | 6 cut(s) | 334, 400, 466, 532, 664, 796 |
| Eco57I | CTGAAG | 6 cut(s) | 63, 256, 326, 368, 434, 698 |
| Eco72I | CACGTG | 1 cut(s) | 956 |
| Eco88I | CYCGRG | 1 cut(s) | 1004 |
| EcoICRI | GAGCTC | 6 cut(s) | 334, 400, 466, 532, 664, 796 |
| EcoO109I | RGGNCCY | 1 cut(s) | 814 |
| EcoRI | GAATTC | 2 cut(s) | 189, 217 |
| EcoRII | CCWGG | 4 cut(s) | 736, 802, 816, 882 |
| EcoT14I | CCWWGG | 1 cut(s) | 929 |
| EcoT22I | ATGCAT | 1 cut(s) | 99 |
| EcoT38I | GRGCYC | 6 cut(s) | 336, 402, 468, 534, 666, 798 |
| ErhI | CCWWGG | 1 cut(s) | 929 |
| FaeI | CATG | 5 cut(s) | 43, 49, 933, 1093, 1330 |
| FaiI | YATR | 9 cut(s) | 41, 47, 71, 266, 931, 1091, 1182, 1232, 1328 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 674, 706 |
| FatI | CATG | 5 cut(s) | 39, 45, 929, 1089, 1326 |
| FbaI | TGATCA | 1 cut(s) | 693 |
| FblI | GTMKAC | 1 cut(s) | 277 |
| Fnu4HI | GCNGC | 7 cut(s) | 356, 422, 809, 875, 926, 961, 1263 |
| FokI | GGATG | 2 cut(s) | 215, 1054 |
| FriOI | GRGCYC | 6 cut(s) | 336, 402, 468, 534, 666, 798 |
| Fsp4HI | GCNGC | 7 cut(s) | 356, 422, 809, 875, 926, 961, 1263 |
| FspBI | CTAG | 1 cut(s) | 971 |
| GluI | GCNGC | 7 cut(s) | 356, 422, 809, 875, 926, 961, 1263 |
| HaeIII | GGCC | 2 cut(s) | 303, 1076 |
| HapII | CCGG | 2 cut(s) | 130, 1005 |
| Hin1II | CATG | 5 cut(s) | 43, 49, 933, 1093, 1330 |
| HincII | GTYRAC | 2 cut(s) | 148, 278 |
| HindII | GTYRAC | 2 cut(s) | 148, 278 |
| HinfI | GANTC | 8 cut(s) | 310, 442, 508, 574, 640, 706, 904, 1167 |
| HpaII | CCGG | 2 cut(s) | 130, 1005 |
| HphI | GGTGA | 1 cut(s) | 1165 |
| Hpy166II | GTNNAC | 2 cut(s) | 148, 278 |
| Hpy188I | TCNGA | 3 cut(s) | 61, 1033, 1072 |
| Hpy188III | TCNNGA | 3 cut(s) | 40, 242, 1270 |
| Hpy8I | GTNNAC | 2 cut(s) | 148, 278 |
| HpyCH4III | ACNGT | 1 cut(s) | 1147 |
| HpyCH4IV | ACGT | 2 cut(s) | 955, 965 |
| HpyF3I | CTNAG | 4 cut(s) | 34, 104, 185, 1132 |
| HpySE526I | ACGT | 2 cut(s) | 955, 965 |
| Hsp92II | CATG | 5 cut(s) | 43, 49, 933, 1093, 1330 |
| Ksp22I | TGATCA | 1 cut(s) | 693 |
| Kzo9I | GATC | 9 cut(s) | 317, 449, 515, 581, 647, 693, 713, 1018, 1028 |
| Lsp1109I | GCAGC | 7 cut(s) | 342, 408, 795, 861, 912, 947, 1249 |
| LweI | GCATC | 3 cut(s) | 84, 940, 1076 |
| MaeI | CTAG | 1 cut(s) | 971 |
| MaeII | ACGT | 2 cut(s) | 955, 965 |
| MaeIII | GTNAC | 2 cut(s) | 125, 966 |
| MalI | GATC | 9 cut(s) | 319, 451, 517, 583, 649, 695, 715, 1020, 1030 |
| MboI | GATC | 9 cut(s) | 317, 449, 515, 581, 647, 693, 713, 1018, 1028 |
| MfeI | CAATTG | 4 cut(s) | 24, 697, 829, 895 |
| MhlI | GDGCHC | 6 cut(s) | 336, 402, 468, 534, 666, 798 |
| MlyI | GAGTC | 8 cut(s) | 319, 451, 517, 583, 649, 715, 913, 1176 |
| MmeI | TCCRAC | 4 cut(s) | 462, 528, 594, 726 |
| Mph1103I | ATGCAT | 1 cut(s) | 99 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1296 |
| MseI | TTAA | 1 cut(s) | 120 |
| MslI | CAYNNNNRTG | 1 cut(s) | 44 |
| MspI | CCGG | 2 cut(s) | 130, 1005 |
| MspR9I | CCNGG | 6 cut(s) | 738, 804, 818, 884, 1005, 1006 |
| MunI | CAATTG | 4 cut(s) | 24, 697, 829, 895 |
| Mva1269I | GAATGC | 1 cut(s) | 35 |
| MvaI | CCWGG | 4 cut(s) | 738, 804, 818, 884 |
| NciI | CCSGG | 2 cut(s) | 1005, 1006 |
| NcoI | CCATGG | 1 cut(s) | 929 |
| NdeII | GATC | 9 cut(s) | 317, 449, 515, 581, 647, 693, 713, 1018, 1028 |
| NlaIII | CATG | 5 cut(s) | 43, 49, 933, 1093, 1330 |
| NlaIV | GGNNCC | 1 cut(s) | 1236 |
| NmuCI | GTSAC | 1 cut(s) | 966 |
| NsiI | ATGCAT | 1 cut(s) | 99 |
| NspI | RCATGY | 1 cut(s) | 1330 |
| PagI | TCATGA | 1 cut(s) | 39 |
| PceI | AGGCCT | 2 cut(s) | 303, 1076 |
| PciI | ACATGT | 1 cut(s) | 1326 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 283 |
| PctI | GAATGC | 1 cut(s) | 35 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1296 |
| PkrI | GCNGC | 7 cut(s) | 357, 423, 810, 876, 927, 962, 1264 |
| PleI | GAGTC | 8 cut(s) | 318, 450, 516, 582, 648, 714, 912, 1175 |
| PmaCI | CACGTG | 1 cut(s) | 956 |
| PmlI | CACGTG | 1 cut(s) | 956 |
| PpsI | GAGTC | 8 cut(s) | 318, 450, 516, 582, 648, 714, 912, 1175 |
| Ppu21I | YACGTR | 1 cut(s) | 956 |
| PpuMI | RGGWCCY | 1 cut(s) | 814 |
| PscI | ACATGT | 1 cut(s) | 1326 |
| Psp124BI | GAGCTC | 6 cut(s) | 336, 402, 468, 534, 666, 798 |
| Psp5II | RGGWCCY | 1 cut(s) | 814 |
| Psp6I | CCWGG | 4 cut(s) | 736, 802, 816, 882 |
| PspCI | CACGTG | 1 cut(s) | 956 |
| PspGI | CCWGG | 4 cut(s) | 736, 802, 816, 882 |
| PspN4I | GGNNCC | 1 cut(s) | 1236 |
| PspPI | GGNCC | 2 cut(s) | 49, 814 |
| PspPPI | RGGWCCY | 1 cut(s) | 814 |
| PstI | CTGCAG | 3 cut(s) | 198, 813, 879 |
| PstNI | CAGNNNCTG | 2 cut(s) | 817, 883 |
| RsaI | GTAC | 3 cut(s) | 881, 1039, 1097 |
| RsaNI | GTAC | 3 cut(s) | 880, 1038, 1096 |
| RseI | CAYNNNNRTG | 1 cut(s) | 44 |
| SacI | GAGCTC | 6 cut(s) | 336, 402, 468, 534, 666, 798 |
| SalI | GTCGAC | 1 cut(s) | 276 |
| SaqAI | TTAA | 1 cut(s) | 120 |
| SatI | GCNGC | 7 cut(s) | 356, 422, 809, 875, 926, 961, 1263 |
| Sau3AI | GATC | 9 cut(s) | 317, 449, 515, 581, 647, 693, 713, 1018, 1028 |
| Sau96I | GGNCC | 2 cut(s) | 49, 814 |
| SchI | GAGTC | 8 cut(s) | 319, 451, 517, 583, 649, 715, 913, 1176 |
| ScrFI | CCNGG | 6 cut(s) | 738, 804, 818, 884, 1005, 1006 |
| SduI | GDGCHC | 6 cut(s) | 336, 402, 468, 534, 666, 798 |
| SfaNI | GCATC | 3 cut(s) | 84, 940, 1076 |
| SfcI | CTRYAG | 3 cut(s) | 194, 809, 875 |
| SinI | GGWCC | 2 cut(s) | 49, 814 |
| SmaI | CCCGGG | 1 cut(s) | 1006 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 44 |
| SmlI | CTYRAG | 7 cut(s) | 18, 113, 156, 164, 177, 281, 823 |
| SmoI | CTYRAG | 7 cut(s) | 18, 113, 156, 164, 177, 281, 823 |
| SseBI | AGGCCT | 2 cut(s) | 303, 1076 |
| SsiI | CCGC | 1 cut(s) | 1257 |
| SspMI | CTAG | 1 cut(s) | 971 |
| SstI | GAGCTC | 6 cut(s) | 336, 402, 468, 534, 666, 798 |
| StuI | AGGCCT | 2 cut(s) | 303, 1076 |
| StyD4I | CCNGG | 6 cut(s) | 736, 802, 816, 882, 1003, 1004 |
| StyI | CCWWGG | 1 cut(s) | 929 |
| TaaI | ACNGT | 1 cut(s) | 1147 |
| TaiI | ACGT | 2 cut(s) | 958, 968 |
| TatI | WGTACW | 1 cut(s) | 1037 |
| Tru1I | TTAA | 1 cut(s) | 120 |
| Tru9I | TTAA | 1 cut(s) | 120 |
| TscAI | CASTG | 2 cut(s) | 203, 1150 |
| TseFI | GTSAC | 1 cut(s) | 966 |
| TseI | GCWGC | 7 cut(s) | 355, 421, 808, 874, 925, 960, 1262 |
| Tsp45I | GTSAC | 1 cut(s) | 966 |
| TspDTI | ATGAA | 3 cut(s) | 56, 1078, 1233 |
| TspMI | CCCGGG | 1 cut(s) | 1004 |
| TspRI | CASTG | 2 cut(s) | 203, 1150 |
| VpaK11BI | GGWCC | 2 cut(s) | 49, 814 |
| XapI | RAATTY | 2 cut(s) | 189, 217 |
| XceI | RCATGY | 1 cut(s) | 1330 |
| XmaI | CCCGGG | 1 cut(s) | 1004 |
| XmiI | GTMKAC | 1 cut(s) | 277 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1296 |
| XspI | CTAG | 1 cut(s) | 971 |
| Zsp2I | ATGCAT | 1 cut(s) | 99 |