Disease resistance protein (TIR-NBS-LRR class)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 89 - 221 | 1.1e-14 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 135, 739, 1198 |
| AclI | AACGTT | 1 cut(s) | 223 |
| AclWI | GGATC | 3 cut(s) | 90, 884, 1119 |
| AcsI | RAATTY | 4 cut(s) | 270, 549, 686, 1068 |
| AcuI | CTGAAG | 1 cut(s) | 169 |
| AcvI | CACGTG | 1 cut(s) | 520 |
| AfaI | GTAC | 1 cut(s) | 31 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 745 |
| AflII | CTTAAG | 1 cut(s) | 500 |
| AflIII | ACRYGT | 1 cut(s) | 519 |
| AgsI | TTSAA | 7 cut(s) | 293, 309, 348, 692, 839, 1084, 1205 |
| AluBI | AGCT | 5 cut(s) | 288, 322, 939, 991, 1089 |
| AluI | AGCT | 5 cut(s) | 288, 322, 939, 991, 1089 |
| Alw21I | GWGCWC | 3 cut(s) | 1025, 1222, 1260 |
| Alw26I | GTCTC | 9 cut(s) | 28, 109, 482, 721, 923, 1012, 1127, 1179, 1256 |
| AlwI | GGATC | 3 cut(s) | 90, 884, 1119 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 62, 1050, 1177 |
| Ama87I | CYCGRG | 2 cut(s) | 485, 1259 |
| AoxI | GGCC | 2 cut(s) | 664, 736 |
| ApeKI | GCWGC | 1 cut(s) | 1050 |
| ApoI | RAATTY | 4 cut(s) | 270, 549, 686, 1068 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 61, 93 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1068 |
| AspLEI | GCGC | 1 cut(s) | 483 |
| AspS9I | GGNCC | 2 cut(s) | 108, 496 |
| AsuC2I | CCSGG | 1 cut(s) | 258 |
| AsuHPI | GGTGA | 3 cut(s) | 458, 518, 827 |
| AvaI | CYCGRG | 2 cut(s) | 485, 1259 |
| AvaII | GGWCC | 2 cut(s) | 108, 496 |
| BanII | GRGCYC | 1 cut(s) | 1170 |
| BbrPI | CACGTG | 1 cut(s) | 520 |
| BbsI | GAAGAC | 1 cut(s) | 1221 |
| Bbv12I | GWGCWC | 3 cut(s) | 1025, 1222, 1260 |
| BbvI | GCAGC | 1 cut(s) | 1037 |
| BccI | CCATC | 1 cut(s) | 408 |
| BcnI | CCSGG | 1 cut(s) | 258 |
| BcoDI | GTCTC | 9 cut(s) | 28, 109, 482, 721, 923, 1012, 1127, 1179, 1256 |
| BfaI | CTAG | 6 cut(s) | 723, 756, 873, 992, 1184, 1233 |
| BfoI | RGCGCY | 1 cut(s) | 484 |
| BfrI | CTTAAG | 1 cut(s) | 500 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1047 |
| BglII | AGATCT | 1 cut(s) | 394 |
| BisI | GCNGC | 3 cut(s) | 739, 1051, 1199 |
| BlsI | GCNGC | 3 cut(s) | 740, 1052, 1200 |
| Bme1390I | CCNGG | 1 cut(s) | 258 |
| Bme18I | GGWCC | 2 cut(s) | 108, 496 |
| BmeT110I | CYCGRG | 2 cut(s) | 485, 1259 |
| BmgT120I | GGNCC | 2 cut(s) | 108, 496 |
| BmiI | GGNNCC | 1 cut(s) | 1169 |
| BmrFI | CCNGG | 1 cut(s) | 258 |
| BmsI | GCATC | 6 cut(s) | 166, 667, 742, 784, 1158, 1235 |
| BpiI | GAAGAC | 1 cut(s) | 1221 |
| BpmI | CTGGAG | 1 cut(s) | 1154 |
| BpuEI | CTTGAG | 3 cut(s) | 23, 944, 995 |
| BpuMI | CCSGG | 1 cut(s) | 258 |
| BsaAI | YACGTR | 1 cut(s) | 520 |
| BsaBI | GATNNNNATC | 1 cut(s) | 399 |
| BsaI | GGTCTC | 1 cut(s) | 1127 |
| BsaJI | CCNNGG | 2 cut(s) | 661, 733 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1126, 1156 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 745 |
| Bse1I | ACTGG | 2 cut(s) | 1171, 1215 |
| Bse8I | GATNNNNATC | 1 cut(s) | 399 |
| BseDI | CCNNGG | 2 cut(s) | 661, 733 |
| BseGI | GGATG | 4 cut(s) | 178, 403, 754, 796 |
| BseJI | GATNNNNATC | 1 cut(s) | 399 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 745 |
| BseMII | CTCAG | 7 cut(s) | 87, 399, 884, 928, 1028, 1057, 1129 |
| BseNI | ACTGG | 2 cut(s) | 1171, 1215 |
| BseXI | GCAGC | 1 cut(s) | 1037 |
| BseYI | CCCAGC | 1 cut(s) | 1145 |
| BsgI | GTGCAG | 1 cut(s) | 48 |
| BshFI | GGCC | 2 cut(s) | 666, 738 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1025, 1222, 1260 |
| BsiHKCI | CYCGRG | 2 cut(s) | 485, 1259 |
| BsiSI | CCGG | 1 cut(s) | 257 |
| BslFI | GGGAC | 1 cut(s) | 273 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 745 |
| BsmAI | GTCTC | 9 cut(s) | 28, 109, 482, 721, 923, 1012, 1127, 1179, 1256 |
| BsmBI | CGTCTC | 1 cut(s) | 1012 |
| BsmFI | GGGAC | 1 cut(s) | 273 |
| BsnI | GGCC | 2 cut(s) | 666, 738 |
| Bso31I | GGTCTC | 1 cut(s) | 1127 |
| BsoBI | CYCGRG | 2 cut(s) | 485, 1259 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1025, 1170, 1222, 1260 |
| Bsp143I | GATC | 7 cut(s) | 82, 394, 514, 876, 904, 1111, 1186 |
| BspACI | CCGC | 3 cut(s) | 135, 739, 1198 |
| BspANI | GGCC | 2 cut(s) | 666, 738 |
| BspCNI | CTCAG | 7 cut(s) | 88, 400, 885, 927, 1029, 1056, 1128 |
| BspLI | GGNNCC | 1 cut(s) | 1169 |
| BspPI | GGATC | 3 cut(s) | 90, 884, 1119 |
| BspTI | CTTAAG | 1 cut(s) | 500 |
| BspTNI | GGTCTC | 1 cut(s) | 1127 |
| BsrI | ACTGG | 2 cut(s) | 1171, 1215 |
| BssECI | CCNNGG | 2 cut(s) | 661, 733 |
| BssMI | GATC | 7 cut(s) | 82, 394, 514, 876, 904, 1111, 1186 |
| BssT1I | CCWWGG | 1 cut(s) | 661 |
| Bst4CI | ACNGT | 3 cut(s) | 46, 618, 771 |
| Bst6I | CTCTTC | 1 cut(s) | 1231 |
| BstAFI | CTTAAG | 1 cut(s) | 500 |
| BstBAI | YACGTR | 1 cut(s) | 520 |
| BstC8I | GCNNGC | 2 cut(s) | 479, 1196 |
| BstDEI | CTNAG | 7 cut(s) | 96, 408, 893, 914, 1037, 1043, 1115 |
| BstF5I | GGATG | 4 cut(s) | 178, 403, 754, 796 |
| BstH2I | RGCGCY | 1 cut(s) | 484 |
| BstHHI | GCGC | 1 cut(s) | 483 |
| BstKTI | GATC | 7 cut(s) | 85, 397, 517, 879, 907, 1114, 1189 |
| BstMAI | GTCTC | 9 cut(s) | 28, 109, 482, 721, 923, 1012, 1127, 1179, 1256 |
| BstMBI | GATC | 7 cut(s) | 82, 394, 514, 876, 904, 1111, 1186 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 328, 1047, 1086 |
| BstSCI | CCNGG | 1 cut(s) | 256 |
| BstV1I | GCAGC | 1 cut(s) | 1037 |
| BstV2I | GAAGAC | 1 cut(s) | 1221 |
| BstX2I | RGATCY | 2 cut(s) | 394, 1111 |
| BstYI | RGATCY | 2 cut(s) | 394, 1111 |
| BsuRI | GGCC | 2 cut(s) | 666, 738 |
| BtsCI | GGATG | 4 cut(s) | 178, 403, 754, 796 |
| BtsI | GCAGTG | 1 cut(s) | 778 |
| BtsIMutI | CAGTG | 5 cut(s) | 63, 778, 1123, 1196, 1222 |
| Cac8I | GCNNGC | 2 cut(s) | 479, 1196 |
| CaiI | CAGNNNCTG | 3 cut(s) | 62, 1050, 1177 |
| CfoI | GCGC | 1 cut(s) | 483 |
| Cfr13I | GGNCC | 2 cut(s) | 108, 496 |
| CseI | GACGC | 1 cut(s) | 817 |
| Csp6I | GTAC | 1 cut(s) | 30 |
| CviAII | CATG | 5 cut(s) | 389, 545, 862, 1126, 1225 |
| CviQI | GTAC | 1 cut(s) | 30 |
| DdeI | CTNAG | 7 cut(s) | 96, 408, 893, 914, 1037, 1043, 1115 |
| DpnI | GATC | 7 cut(s) | 84, 396, 516, 878, 906, 1113, 1188 |
| DpnII | GATC | 7 cut(s) | 82, 394, 514, 876, 904, 1111, 1186 |
| DraI | TTTAAA | 1 cut(s) | 951 |
| Eam1104I | CTCTTC | 1 cut(s) | 1231 |
| EarI | CTCTTC | 1 cut(s) | 1231 |
| Eco130I | CCWWGG | 1 cut(s) | 661 |
| Eco24I | GRGCYC | 1 cut(s) | 1170 |
| Eco31I | GGTCTC | 1 cut(s) | 1127 |
| Eco47I | GGWCC | 2 cut(s) | 108, 496 |
| Eco57I | CTGAAG | 1 cut(s) | 169 |
| Eco72I | CACGTG | 1 cut(s) | 520 |
| Eco88I | CYCGRG | 2 cut(s) | 485, 1259 |
| EcoT14I | CCWWGG | 1 cut(s) | 661 |
| EcoT38I | GRGCYC | 1 cut(s) | 1170 |
| ErhI | CCWWGG | 1 cut(s) | 661 |
| Esp3I | CGTCTC | 1 cut(s) | 1012 |
| FaeI | CATG | 5 cut(s) | 392, 548, 865, 1129, 1228 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 793, 825 |
| FaqI | GGGAC | 1 cut(s) | 273 |
| FatI | CATG | 5 cut(s) | 388, 544, 861, 1125, 1224 |
| Fnu4HI | GCNGC | 3 cut(s) | 739, 1051, 1199 |
| FokI | GGATG | 4 cut(s) | 185, 390, 761, 803 |
| FriOI | GRGCYC | 1 cut(s) | 1170 |
| Fsp4HI | GCNGC | 3 cut(s) | 739, 1051, 1199 |
| FspBI | CTAG | 6 cut(s) | 723, 756, 873, 992, 1184, 1233 |
| GlaI | GCGC | 1 cut(s) | 482 |
| GluI | GCNGC | 3 cut(s) | 739, 1051, 1199 |
| GsaI | CCCAGC | 1 cut(s) | 1149 |
| GsuI | CTGGAG | 1 cut(s) | 1154 |
| HaeII | RGCGCY | 1 cut(s) | 484 |
| HaeIII | GGCC | 2 cut(s) | 666, 738 |
| HapII | CCGG | 1 cut(s) | 257 |
| HgaI | GACGC | 1 cut(s) | 817 |
| HhaI | GCGC | 1 cut(s) | 483 |
| Hin1II | CATG | 5 cut(s) | 392, 548, 865, 1129, 1228 |
| Hin6I | GCGC | 1 cut(s) | 481 |
| HinP1I | GCGC | 1 cut(s) | 481 |
| HincII | GTYRAC | 1 cut(s) | 767 |
| HindII | GTYRAC | 1 cut(s) | 767 |
| HindIII | AAGCTT | 1 cut(s) | 320 |
| HinfI | GANTC | 4 cut(s) | 36, 344, 427, 607 |
| HpaII | CCGG | 1 cut(s) | 257 |
| HphI | GGTGA | 3 cut(s) | 458, 518, 827 |
| Hpy166II | GTNNAC | 4 cut(s) | 30, 614, 704, 767 |
| Hpy188I | TCNGA | 9 cut(s) | 10, 97, 188, 276, 340, 556, 684, 1038, 1046 |
| Hpy188III | TCNNGA | 7 cut(s) | 40, 407, 487, 611, 1073, 1233, 1261 |
| Hpy8I | GTNNAC | 4 cut(s) | 30, 614, 704, 767 |
| HpyAV | CCTTC | 3 cut(s) | 68, 920, 1021 |
| HpyCH4III | ACNGT | 3 cut(s) | 46, 618, 771 |
| HpyCH4IV | ACGT | 3 cut(s) | 223, 519, 627 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 328, 1047, 1086 |
| HpyF3I | CTNAG | 7 cut(s) | 96, 408, 893, 914, 1037, 1043, 1115 |
| HpySE526I | ACGT | 3 cut(s) | 223, 519, 627 |
| Hsp92II | CATG | 5 cut(s) | 392, 548, 865, 1129, 1228 |
| HspAI | GCGC | 1 cut(s) | 481 |
| Kzo9I | GATC | 7 cut(s) | 82, 394, 514, 876, 904, 1111, 1186 |
| LmnI | GCTCC | 3 cut(s) | 377, 1173, 1225 |
| LpnPI | CCDG | 9 cut(s) | 219, 270, 420, 783, 905, 1086, 1159, 1184, 1228 |
| Lsp1109I | GCAGC | 1 cut(s) | 1037 |
| LweI | GCATC | 6 cut(s) | 166, 667, 742, 784, 1158, 1235 |
| MaeI | CTAG | 6 cut(s) | 723, 756, 873, 992, 1184, 1233 |
| MaeII | ACGT | 3 cut(s) | 223, 519, 627 |
| MaeIII | GTNAC | 3 cut(s) | 58, 161, 776 |
| MalI | GATC | 7 cut(s) | 84, 396, 516, 878, 906, 1113, 1188 |
| MboI | GATC | 7 cut(s) | 82, 394, 514, 876, 904, 1111, 1186 |
| MboII | GAAGA | 5 cut(s) | 404, 947, 1076, 1221, 1248 |
| MflI | RGATCY | 2 cut(s) | 394, 1111 |
| MhlI | GDGCHC | 4 cut(s) | 1025, 1170, 1222, 1260 |
| MlyI | GAGTC | 1 cut(s) | 30 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1068 |
| MseI | TTAA | 6 cut(s) | 219, 248, 318, 501, 950, 1267 |
| MslI | CAYNNNNRTG | 2 cut(s) | 862, 866 |
| MspCI | CTTAAG | 1 cut(s) | 500 |
| MspI | CCGG | 1 cut(s) | 257 |
| MspR9I | CCNGG | 1 cut(s) | 258 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 328, 1047, 1086 |
| NciI | CCSGG | 1 cut(s) | 258 |
| NdeII | GATC | 7 cut(s) | 82, 394, 514, 876, 904, 1111, 1186 |
| NlaIII | CATG | 5 cut(s) | 392, 548, 865, 1129, 1228 |
| NlaIV | GGNNCC | 1 cut(s) | 1169 |
| NmuCI | GTSAC | 2 cut(s) | 58, 776 |
| PaeR7I | CTCGAG | 2 cut(s) | 485, 1259 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1068 |
| PfeI | GAWTC | 3 cut(s) | 344, 427, 607 |
| PflFI | GACNNNGTC | 1 cut(s) | 46 |
| PfoI | TCCNGGA | 1 cut(s) | 256 |
| PkrI | GCNGC | 3 cut(s) | 740, 1052, 1200 |
| PleI | GAGTC | 1 cut(s) | 30 |
| PmaCI | CACGTG | 1 cut(s) | 520 |
| PmlI | CACGTG | 1 cut(s) | 520 |
| PpsI | GAGTC | 1 cut(s) | 30 |
| Ppu21I | YACGTR | 1 cut(s) | 520 |
| Psp1406I | AACGTT | 1 cut(s) | 223 |
| PspCI | CACGTG | 1 cut(s) | 520 |
| PspFI | CCCAGC | 1 cut(s) | 1145 |
| PspN4I | GGNNCC | 1 cut(s) | 1169 |
| PspPI | GGNCC | 2 cut(s) | 108, 496 |
| PstNI | CAGNNNCTG | 3 cut(s) | 62, 1050, 1177 |
| PsuI | RGATCY | 2 cut(s) | 394, 1111 |
| PsyI | GACNNNGTC | 1 cut(s) | 46 |
| RsaI | GTAC | 1 cut(s) | 31 |
| RsaNI | GTAC | 1 cut(s) | 30 |
| RseI | CAYNNNNRTG | 2 cut(s) | 862, 866 |
| SaqAI | TTAA | 6 cut(s) | 219, 248, 318, 501, 950, 1267 |
| SatI | GCNGC | 3 cut(s) | 739, 1051, 1199 |
| Sau3AI | GATC | 7 cut(s) | 82, 394, 514, 876, 904, 1111, 1186 |
| Sau96I | GGNCC | 2 cut(s) | 108, 496 |
| SchI | GAGTC | 1 cut(s) | 30 |
| ScrFI | CCNGG | 1 cut(s) | 258 |
| SduI | GDGCHC | 4 cut(s) | 1025, 1170, 1222, 1260 |
| SfaNI | GCATC | 6 cut(s) | 166, 667, 742, 784, 1158, 1235 |
| Sfr274I | CTCGAG | 2 cut(s) | 485, 1259 |
| SinI | GGWCC | 2 cut(s) | 108, 496 |
| SlaI | CTCGAG | 2 cut(s) | 485, 1259 |
| SmiI | ATTTAAAT | 1 cut(s) | 951 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 862, 866 |
| SmlI | CTYRAG | 6 cut(s) | 38, 485, 500, 959, 974, 1259 |
| SmoI | CTYRAG | 6 cut(s) | 38, 485, 500, 959, 974, 1259 |
| SsiI | CCGC | 3 cut(s) | 135, 739, 1198 |
| SspI | AATATT | 2 cut(s) | 316, 835 |
| SspMI | CTAG | 6 cut(s) | 723, 756, 873, 992, 1184, 1233 |
| StyD4I | CCNGG | 1 cut(s) | 256 |
| StyI | CCWWGG | 1 cut(s) | 661 |
| SwaI | ATTTAAAT | 1 cut(s) | 951 |
| TaaI | ACNGT | 3 cut(s) | 46, 618, 771 |
| TaiI | ACGT | 3 cut(s) | 226, 522, 630 |
| TaqI | TCGA | 3 cut(s) | 486, 1243, 1260 |
| TaqII | GACCGA | 1 cut(s) | 125 |
| TauI | GCSGC | 2 cut(s) | 741, 1201 |
| TfiI | GAWTC | 3 cut(s) | 344, 427, 607 |
| Tru1I | TTAA | 6 cut(s) | 219, 248, 318, 501, 950, 1267 |
| Tru9I | TTAA | 6 cut(s) | 219, 248, 318, 501, 950, 1267 |
| TscAI | CASTG | 5 cut(s) | 63, 785, 1123, 1196, 1222 |
| TseFI | GTSAC | 2 cut(s) | 58, 776 |
| TseI | GCWGC | 1 cut(s) | 1050 |
| Tsp45I | GTSAC | 2 cut(s) | 58, 776 |
| TspDTI | ATGAA | 7 cut(s) | 282, 326, 405, 561, 573, 850, 1003 |
| TspGWI | ACGGA | 1 cut(s) | 364 |
| TspRI | CASTG | 5 cut(s) | 63, 785, 1123, 1196, 1222 |
| Tth111I | GACNNNGTC | 1 cut(s) | 46 |
| Vha464I | CTTAAG | 1 cut(s) | 500 |
| VpaK11BI | GGWCC | 2 cut(s) | 108, 496 |
| XapI | RAATTY | 4 cut(s) | 270, 549, 686, 1068 |
| XbaI | TCTAGA | 1 cut(s) | 1232 |
| XhoI | CTCGAG | 2 cut(s) | 485, 1259 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1068 |
| XspI | CTAG | 6 cut(s) | 723, 756, 873, 992, 1184, 1233 |