Disease resistance protein (TIR-NBS-LRR class)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 192 - 332 | 5.2e-15 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 288 |
| AciI | CCGC | 3 cut(s) | 286, 952, 957 |
| AclWI | GGATC | 3 cut(s) | 538, 615, 628 |
| AcsI | RAATTY | 4 cut(s) | 379, 515, 536, 667 |
| AcuI | CTGAAG | 3 cut(s) | 543, 546, 921 |
| AfaI | GTAC | 4 cut(s) | 510, 793, 854, 924 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 108 |
| AgsI | TTSAA | 2 cut(s) | 521, 748 |
| AjnI | CCWGG | 2 cut(s) | 395, 577 |
| AluBI | AGCT | 6 cut(s) | 96, 226, 271, 606, 640, 683 |
| AluI | AGCT | 6 cut(s) | 96, 226, 271, 606, 640, 683 |
| Alw21I | GWGCWC | 1 cut(s) | 228 |
| Alw26I | GTCTC | 2 cut(s) | 269, 470 |
| AlwI | GGATC | 3 cut(s) | 538, 615, 628 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 566 |
| AoxI | GGCC | 1 cut(s) | 172 |
| ApeKI | GCWGC | 1 cut(s) | 261 |
| ApoI | RAATTY | 4 cut(s) | 379, 515, 536, 667 |
| AseI | ATTAAT | 1 cut(s) | 491 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 75 |
| AspLEI | GCGC | 1 cut(s) | 788 |
| AspS9I | GGNCC | 1 cut(s) | 954 |
| AsuHPI | GGTGA | 2 cut(s) | 773, 833 |
| AvaII | GGWCC | 1 cut(s) | 954 |
| AxyI | CCTNAGG | 1 cut(s) | 176 |
| BamHI | GGATCC | 1 cut(s) | 620 |
| BanII | GRGCYC | 1 cut(s) | 228 |
| BbsI | GAAGAC | 2 cut(s) | 21, 771 |
| Bbv12I | GWGCWC | 1 cut(s) | 228 |
| BbvI | GCAGC | 1 cut(s) | 248 |
| BccI | CCATC | 2 cut(s) | 164, 777 |
| BceAI | ACGGC | 1 cut(s) | 456 |
| BciT130I | CCWGG | 2 cut(s) | 397, 579 |
| BclI | TGATCA | 2 cut(s) | 481, 823 |
| BcoDI | GTCTC | 2 cut(s) | 269, 470 |
| BfaI | CTAG | 2 cut(s) | 44, 62 |
| BfmI | CTRYAG | 1 cut(s) | 970 |
| BisI | GCNGC | 1 cut(s) | 262 |
| BlsI | GCNGC | 1 cut(s) | 263 |
| Bme1390I | CCNGG | 2 cut(s) | 397, 579 |
| Bme18I | GGWCC | 1 cut(s) | 954 |
| BmgT120I | GGNCC | 1 cut(s) | 954 |
| BmiI | GGNNCC | 2 cut(s) | 182, 622 |
| BmrFI | CCNGG | 2 cut(s) | 397, 579 |
| BmsI | GCATC | 4 cut(s) | 241, 406, 652, 997 |
| BpiI | GAAGAC | 2 cut(s) | 21, 771 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 536, 568 |
| BpmI | CTGGAG | 2 cut(s) | 130, 293 |
| BpuEI | CTTGAG | 1 cut(s) | 455 |
| BsaAI | YACGTR | 1 cut(s) | 38 |
| BsaBI | GATNNNNATC | 3 cut(s) | 140, 500, 632 |
| BsaJI | CCNNGG | 2 cut(s) | 52, 578 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 266, 296 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 108 |
| Bse21I | CCTNAGG | 1 cut(s) | 176 |
| Bse3DI | GCAATG | 1 cut(s) | 898 |
| Bse8I | GATNNNNATC | 3 cut(s) | 140, 500, 632 |
| BseBI | CCWGG | 2 cut(s) | 397, 579 |
| BseDI | CCNNGG | 2 cut(s) | 52, 578 |
| BseGI | GGATG | 3 cut(s) | 322, 391, 418 |
| BseJI | GATNNNNATC | 3 cut(s) | 140, 500, 632 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 108 |
| BseMI | GCAATG | 1 cut(s) | 898 |
| BseMII | CTCAG | 1 cut(s) | 167 |
| BseRI | GAGGAG | 1 cut(s) | 458 |
| BseXI | GCAGC | 1 cut(s) | 248 |
| BshFI | GGCC | 1 cut(s) | 174 |
| BsiHKAI | GWGCWC | 1 cut(s) | 228 |
| BslFI | GGGAC | 1 cut(s) | 268 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 108 |
| BsmAI | GTCTC | 2 cut(s) | 269, 470 |
| BsmFI | GGGAC | 1 cut(s) | 268 |
| BsmI | GAATGC | 1 cut(s) | 397 |
| BsnI | GGCC | 1 cut(s) | 174 |
| Bsp1286I | GDGCHC | 1 cut(s) | 228 |
| Bsp1407I | TGTACA | 2 cut(s) | 508, 922 |
| Bsp143I | GATC | 7 cut(s) | 141, 343, 481, 530, 620, 823, 835 |
| Bsp19I | CCATGG | 1 cut(s) | 52 |
| BspACI | CCGC | 3 cut(s) | 286, 952, 957 |
| BspANI | GGCC | 1 cut(s) | 174 |
| BspCNI | CTCAG | 1 cut(s) | 168 |
| BspHI | TCATGA | 3 cut(s) | 349, 484, 658 |
| BspLI | GGNNCC | 2 cut(s) | 182, 622 |
| BspPI | GGATC | 3 cut(s) | 538, 615, 628 |
| BsrBI | CCGCTC | 1 cut(s) | 288 |
| BsrDI | GCAATG | 1 cut(s) | 898 |
| BsrGI | TGTACA | 2 cut(s) | 508, 922 |
| BssECI | CCNNGG | 2 cut(s) | 52, 578 |
| BssMI | GATC | 7 cut(s) | 141, 343, 481, 530, 620, 823, 835 |
| BssT1I | CCWWGG | 1 cut(s) | 52 |
| Bst2UI | CCWGG | 2 cut(s) | 397, 579 |
| Bst4CI | ACNGT | 4 cut(s) | 280, 754, 782, 971 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 217 |
| BstAUI | TGTACA | 2 cut(s) | 508, 922 |
| BstBAI | YACGTR | 1 cut(s) | 38 |
| BstC8I | GCNNGC | 2 cut(s) | 939, 998 |
| BstDEI | CTNAG | 3 cut(s) | 176, 425, 461 |
| BstDSI | CCRYGG | 1 cut(s) | 52 |
| BstF5I | GGATG | 3 cut(s) | 322, 391, 418 |
| BstHHI | GCGC | 1 cut(s) | 788 |
| BstKTI | GATC | 7 cut(s) | 144, 346, 484, 533, 623, 826, 838 |
| BstMAI | GTCTC | 2 cut(s) | 269, 470 |
| BstMBI | GATC | 7 cut(s) | 141, 343, 481, 530, 620, 823, 835 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 93, 217, 689, 902, 972 |
| BstNI | CCWGG | 2 cut(s) | 397, 579 |
| BstNSI | RCATGY | 1 cut(s) | 941 |
| BstSCI | CCNGG | 2 cut(s) | 395, 577 |
| BstSFI | CTRYAG | 1 cut(s) | 970 |
| BstV1I | GCAGC | 1 cut(s) | 248 |
| BstV2I | GAAGAC | 2 cut(s) | 21, 771 |
| BstX2I | RGATCY | 1 cut(s) | 620 |
| BstYI | RGATCY | 1 cut(s) | 620 |
| Bsu36I | CCTNAGG | 1 cut(s) | 176 |
| BsuRI | GGCC | 1 cut(s) | 174 |
| BtgI | CCRYGG | 1 cut(s) | 52 |
| BtsCI | GGATG | 3 cut(s) | 322, 391, 418 |
| BtsIMutI | CAGTG | 2 cut(s) | 285, 897 |
| Cac8I | GCNNGC | 2 cut(s) | 939, 998 |
| CaiI | CAGNNNCTG | 1 cut(s) | 566 |
| CciI | TCATGA | 3 cut(s) | 349, 484, 658 |
| CfoI | GCGC | 1 cut(s) | 788 |
| Cfr13I | GGNCC | 1 cut(s) | 954 |
| CpoI | CGGWCCG | 1 cut(s) | 954 |
| CseI | GACGC | 1 cut(s) | 156 |
| Csp6I | GTAC | 4 cut(s) | 509, 792, 853, 923 |
| CspI | CGGWCCG | 1 cut(s) | 954 |
| CviAII | CATG | 8 cut(s) | 53, 133, 265, 350, 485, 659, 714, 938 |
| CviQI | GTAC | 4 cut(s) | 509, 792, 853, 923 |
| DdeI | CTNAG | 3 cut(s) | 176, 425, 461 |
| DpnI | GATC | 7 cut(s) | 143, 345, 483, 532, 622, 825, 837 |
| DpnII | GATC | 7 cut(s) | 141, 343, 481, 530, 620, 823, 835 |
| Ecl136II | GAGCTC | 1 cut(s) | 226 |
| Eco130I | CCWWGG | 1 cut(s) | 52 |
| Eco24I | GRGCYC | 1 cut(s) | 228 |
| Eco47I | GGWCC | 1 cut(s) | 954 |
| Eco53kI | GAGCTC | 1 cut(s) | 226 |
| Eco57I | CTGAAG | 3 cut(s) | 543, 546, 921 |
| Eco81I | CCTNAGG | 1 cut(s) | 176 |
| EcoICRI | GAGCTC | 1 cut(s) | 226 |
| EcoRII | CCWGG | 2 cut(s) | 395, 577 |
| EcoT14I | CCWWGG | 1 cut(s) | 52 |
| EcoT22I | ATGCAT | 1 cut(s) | 421 |
| EcoT38I | GRGCYC | 1 cut(s) | 228 |
| ErhI | CCWWGG | 1 cut(s) | 52 |
| FaeI | CATG | 8 cut(s) | 56, 136, 268, 353, 488, 662, 717, 941 |
| FaqI | GGGAC | 1 cut(s) | 268 |
| FatI | CATG | 8 cut(s) | 52, 132, 264, 349, 484, 658, 713, 937 |
| FauI | CCCGC | 1 cut(s) | 293 |
| FbaI | TGATCA | 2 cut(s) | 481, 823 |
| Fnu4HI | GCNGC | 1 cut(s) | 262 |
| FokI | GGATG | 3 cut(s) | 329, 398, 425 |
| FriOI | GRGCYC | 1 cut(s) | 228 |
| Fsp4HI | GCNGC | 1 cut(s) | 262 |
| FspBI | CTAG | 2 cut(s) | 44, 62 |
| GlaI | GCGC | 1 cut(s) | 787 |
| GluI | GCNGC | 1 cut(s) | 262 |
| GsuI | CTGGAG | 2 cut(s) | 130, 293 |
| HaeIII | GGCC | 1 cut(s) | 174 |
| HgaI | GACGC | 1 cut(s) | 156 |
| HhaI | GCGC | 1 cut(s) | 788 |
| Hin1II | CATG | 8 cut(s) | 56, 136, 268, 353, 488, 662, 717, 941 |
| Hin6I | GCGC | 1 cut(s) | 786 |
| HinP1I | GCGC | 1 cut(s) | 786 |
| HindIII | AAGCTT | 1 cut(s) | 638 |
| HinfI | GANTC | 2 cut(s) | 830, 861 |
| HphI | GGTGA | 2 cut(s) | 773, 833 |
| Hpy166II | GTNNAC | 3 cut(s) | 338, 741, 876 |
| Hpy188I | TCNGA | 4 cut(s) | 535, 810, 835, 1006 |
| Hpy188III | TCNNGA | 8 cut(s) | 44, 80, 109, 350, 485, 542, 659, 827 |
| Hpy8I | GTNNAC | 3 cut(s) | 338, 741, 876 |
| HpyAV | CCTTC | 3 cut(s) | 521, 567, 611 |
| HpyCH4III | ACNGT | 4 cut(s) | 280, 754, 782, 971 |
| HpyCH4IV | ACGT | 1 cut(s) | 37 |
| HpyCH4V | TGCA | 7 cut(s) | 87, 201, 211, 254, 264, 419, 665 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 93, 217, 689, 902, 972 |
| HpyF3I | CTNAG | 3 cut(s) | 176, 425, 461 |
| HpySE526I | ACGT | 1 cut(s) | 37 |
| Hsp92II | CATG | 8 cut(s) | 56, 136, 268, 353, 488, 662, 717, 941 |
| HspAI | GCGC | 1 cut(s) | 786 |
| Ksp22I | TGATCA | 2 cut(s) | 481, 823 |
| Kzo9I | GATC | 7 cut(s) | 141, 343, 481, 530, 620, 823, 835 |
| LmnI | GCTCC | 2 cut(s) | 231, 544 |
| Lsp1109I | GCAGC | 1 cut(s) | 248 |
| LweI | GCATC | 4 cut(s) | 241, 406, 652, 997 |
| MaeI | CTAG | 2 cut(s) | 44, 62 |
| MaeII | ACGT | 1 cut(s) | 37 |
| MaeIII | GTNAC | 2 cut(s) | 401, 697 |
| MalI | GATC | 7 cut(s) | 143, 345, 483, 532, 622, 825, 837 |
| MbiI | CCGCTC | 1 cut(s) | 288 |
| MboI | GATC | 7 cut(s) | 141, 343, 481, 530, 620, 823, 835 |
| MboII | GAAGA | 5 cut(s) | 21, 83, 227, 776, 878 |
| MflI | RGATCY | 1 cut(s) | 620 |
| MhlI | GDGCHC | 1 cut(s) | 228 |
| MluCI | AATT | 7 cut(s) | 379, 488, 515, 536, 649, 667, 773 |
| MlyI | GAGTC | 1 cut(s) | 855 |
| Mph1103I | ATGCAT | 1 cut(s) | 421 |
| MroXI | GAANNNNTTC | 1 cut(s) | 75 |
| MseI | TTAA | 6 cut(s) | 98, 138, 377, 476, 491, 735 |
| MslI | CAYNNNNRTG | 1 cut(s) | 942 |
| MspA1I | CMGCKG | 1 cut(s) | 959 |
| MspR9I | CCNGG | 2 cut(s) | 397, 579 |
| Mva1269I | GAATGC | 1 cut(s) | 397 |
| MvaI | CCWGG | 2 cut(s) | 397, 579 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 93, 217, 689, 902, 972 |
| NcoI | CCATGG | 1 cut(s) | 52 |
| NdeII | GATC | 7 cut(s) | 141, 343, 481, 530, 620, 823, 835 |
| NlaIII | CATG | 8 cut(s) | 56, 136, 268, 353, 488, 662, 717, 941 |
| NlaIV | GGNNCC | 2 cut(s) | 182, 622 |
| NsiI | ATGCAT | 1 cut(s) | 421 |
| NspI | RCATGY | 1 cut(s) | 941 |
| PaeI | GCATGC | 1 cut(s) | 941 |
| PagI | TCATGA | 3 cut(s) | 349, 484, 658 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 861 |
| PctI | GAATGC | 1 cut(s) | 397 |
| PdmI | GAANNNNTTC | 1 cut(s) | 75 |
| PfeI | GAWTC | 1 cut(s) | 830 |
| PflFI | GACNNNGTC | 1 cut(s) | 280 |
| PkrI | GCNGC | 1 cut(s) | 263 |
| PleI | GAGTC | 1 cut(s) | 855 |
| PpsI | GAGTC | 1 cut(s) | 855 |
| Ppu21I | YACGTR | 1 cut(s) | 38 |
| PshBI | ATTAAT | 1 cut(s) | 491 |
| Psp124BI | GAGCTC | 1 cut(s) | 228 |
| Psp6I | CCWGG | 2 cut(s) | 395, 577 |
| PspGI | CCWGG | 2 cut(s) | 395, 577 |
| PspN4I | GGNNCC | 2 cut(s) | 182, 622 |
| PspPI | GGNCC | 1 cut(s) | 954 |
| PstNI | CAGNNNCTG | 1 cut(s) | 566 |
| PsuI | RGATCY | 1 cut(s) | 620 |
| PsyI | GACNNNGTC | 1 cut(s) | 280 |
| RsaI | GTAC | 4 cut(s) | 510, 793, 854, 924 |
| RsaNI | GTAC | 4 cut(s) | 509, 792, 853, 923 |
| RseI | CAYNNNNRTG | 1 cut(s) | 942 |
| Rsr2I | CGGWCCG | 1 cut(s) | 954 |
| RsrII | CGGWCCG | 1 cut(s) | 954 |
| SacI | GAGCTC | 1 cut(s) | 228 |
| SaqAI | TTAA | 6 cut(s) | 98, 138, 377, 476, 491, 735 |
| SatI | GCNGC | 1 cut(s) | 262 |
| Sau3AI | GATC | 7 cut(s) | 141, 343, 481, 530, 620, 823, 835 |
| Sau96I | GGNCC | 1 cut(s) | 954 |
| SchI | GAGTC | 1 cut(s) | 855 |
| ScrFI | CCNGG | 2 cut(s) | 397, 579 |
| SduI | GDGCHC | 1 cut(s) | 228 |
| SfaNI | GCATC | 4 cut(s) | 241, 406, 652, 997 |
| SfcI | CTRYAG | 1 cut(s) | 970 |
| SinI | GGWCC | 1 cut(s) | 954 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 942 |
| SmlI | CTYRAG | 1 cut(s) | 470 |
| SmoI | CTYRAG | 1 cut(s) | 470 |
| SphI | GCATGC | 1 cut(s) | 941 |
| Sse9I | AATT | 7 cut(s) | 379, 488, 515, 536, 649, 667, 773 |
| SsiI | CCGC | 3 cut(s) | 286, 952, 957 |
| SspMI | CTAG | 2 cut(s) | 44, 62 |
| SstI | GAGCTC | 1 cut(s) | 228 |
| StyD4I | CCNGG | 2 cut(s) | 395, 577 |
| StyI | CCWWGG | 1 cut(s) | 52 |
| TaaI | ACNGT | 4 cut(s) | 280, 754, 782, 971 |
| TaiI | ACGT | 1 cut(s) | 40 |
| TaqI | TCGA | 4 cut(s) | 32, 290, 626, 864 |
| TasI | AATT | 7 cut(s) | 379, 488, 515, 536, 649, 667, 773 |
| TatI | WGTACW | 2 cut(s) | 508, 922 |
| TfiI | GAWTC | 1 cut(s) | 830 |
| Tru1I | TTAA | 6 cut(s) | 98, 138, 377, 476, 491, 735 |
| Tru9I | TTAA | 6 cut(s) | 98, 138, 377, 476, 491, 735 |
| TscAI | CASTG | 2 cut(s) | 285, 904 |
| TseI | GCWGC | 1 cut(s) | 261 |
| TspDTI | ATGAA | 3 cut(s) | 281, 333, 501 |
| TspRI | CASTG | 2 cut(s) | 285, 904 |
| Tth111I | GACNNNGTC | 1 cut(s) | 280 |
| VpaK11BI | GGWCC | 1 cut(s) | 954 |
| VspI | ATTAAT | 1 cut(s) | 491 |
| XapI | RAATTY | 4 cut(s) | 379, 515, 536, 667 |
| XbaI | TCTAGA | 1 cut(s) | 43 |
| XceI | RCATGY | 1 cut(s) | 941 |
| XmnI | GAANNNNTTC | 1 cut(s) | 75 |
| XspI | CTAG | 2 cut(s) | 44, 62 |
| Zsp2I | ATGCAT | 1 cut(s) | 421 |