Rh3BG038100

RESISTANCE protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
Physical Location & Seq
Forward (+)
2498876 .. 2500699
1824 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG038100.1

Sequence Viewer

Length: 1731 bp
ATGGAGTTCTTAGATTTAAGTGATACTGCAGTAGAAGAATTGCCTCCATCAATTTTTTCTCTTGAAAAACTTCTTACATTGAATCTTCGTTACTGTAGTTCCATTAAGAATCTTTCGAGCAGTCCATGGAAGATGAAATCCCTCAATCATCTTTTGTTGAGAGGGACAAATATAGAAACAGTGCCCTCTTCGTCATTCGTGTGGATGACTGGGATCATTTCACTTGAGCTGAGAGATTGTCATCACCTGGTCAGTCTCCCGATGGACATTTGTAAGTTGAAATCTCTTGAGAGACTTGATCTCTCTGGTTGCCATAGTTTCACAAATTTTCCGGAAATTGCGGAGCGTATGGAACATCTGGAGTATCTTAATTTAAGTGGGACGAAAATTGAAGAGCTGCCGTCATCGGTTGGGAATCTTGTTGGGCTCAAGACATTAGATTTAACTTACTGCACAAGCCTTGAATTACTCCCAAACAGCTTCGGCAATTTAAACATTCTCGAGTGGTTCTCATTTCGTGGATGTAAGAAGCTAGAAGAAATTCCCGATTGCTTTACAAGCTTTCCTGCATTGCAAGTCTTAGATTTGAGTGAAACCATGATTGAGACCATACCTCCCACCATCAAACAAGTTTTTGGGCTCAAGTCTCTGCTACTAGATCCGTGCGAGCGGCTTCAATCTTTGCCAGTGCTCCCATGTCTTCTAGAAGAGTTGGAGGCACAGGGGTGCAAGAGACTTGAGACATTGTCAGTTTCAGTGACCGCACAGACACAAGGTTTGGATCAAATACTTTCAGGGGAAAGGACCGAGGCCCATTCATTTCTTGGTTGCAATAATTTGGATAACAGTTCAAGGAGTAACATAATGGATGATGCACACATCAGAATTATGCGAATGGCAACTGCTTGTAATCTTAAACGTTTATCATATGGTCATGTAGAGTTAATGTGTCCGGGAAGTGAAATTCCAAAATGGTTTAGCTGTCGAACGGAGGGATCTTCAATGAATATTAAGCTTCCTCTGCATTGGTCTGATGATTCAAACTTCTTGGGTATTGCTCTCTGCTCTGTTTGCTCTGTTTCTGCAACCAATGAAGATCTCTATCCTCCTGGGTATCAATGTGAGATGATTCTCAAAACCAACAGTGGTGCAACCCATACTGTCAATTTGGGACATACAAGGGAGTACCGGACCGATGACTGGACGGCTGAAACAGATCACGTGTTGGTGTGGTATGATACAGGCCGTGTAATTTCAGATGAAGCAAAATGGTCTTCGGAAGCCTTTTTTGAGTTCTATACAGAAGTTGATCGTAAACGGTTAAATGACATGAAAAGGTGTGGGGTCTGCTTTCTGTATGCCCAAGGCCAAGATGATGATGCTCTGAAATTTGAAGTCATTCCCCCACAAGAAGTTACTAGTTTACTACAACTAGGAGCAGCCACGGCCGCTTTGAGGATGAAACTAGAGAAAGTCAAATGTGGAGACACTGCGGCCGCTTTGGCCTTAGTGGAAGTCAAATGTCGAGACACCGCGGCTGCTTTGGGGATGAAACTAGCGAAAATCAATTCTGGGAACACCGCGGCCGCTTTGGGGTTGAAGCTGGTGGAAATTAAATGTCTGGTCACTTTGATACTGGAAGTGAAACTTTTACTTGAACAATCTTGCAAGGTTTTTAGAACTGTCAACTGGTTTTCCCGACTACATTTTTCTGCATCCTGTTTGTGTTGA

Protein Analysis

576

Amino Acids

64.32

Weight (kDa)

5.34

Isoelectric Point (pI)

38.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_13 PF23286 93 - 181 7.5e-10 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 99 - 178 3.1e-11 Leucine-rich repeat region
C-JID PF20160 317 - 455 7.6e-15 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 670
AccII CGCG 2 cut(s) 1535, 1583
AccIII TCCGGA 1 cut(s) 331
AclI AACGTT 1 cut(s) 919
AclWI GGATC 4 cut(s) 221, 653, 789, 1003
AcoI YGGCCR 3 cut(s) 1446, 1494, 1584
AcsI RAATTY 4 cut(s) 325, 540, 963, 1388
AcvI CACGTG 1 cut(s) 1222
AfaI GTAC 1 cut(s) 1187
AfiI CCNNNNNNNGG 3 cut(s) 1200, 1455, 1593
AflIII ACRYGT 1 cut(s) 1221
AhlI ACTAGT 1 cut(s) 1418
AjnI CCWGG 2 cut(s) 246, 1108
AleI CACNNNNGTG 1 cut(s) 724
AluBI AGCT 8 cut(s) 229, 397, 480, 532, 561, 981, 1015, 1603
AluI AGCT 8 cut(s) 229, 397, 480, 532, 561, 981, 1015, 1603
Alw21I GWGCWC 1 cut(s) 693
Alw26I GTCTC 8 cut(s) 260, 286, 599, 651, 727, 734, 1479, 1521
AlwI GGATC 4 cut(s) 221, 653, 789, 1003
Ama87I CYCGRG 1 cut(s) 500
Aor13HI TCCGGA 1 cut(s) 331
AoxI GGCC 7 cut(s) 810, 1243, 1366, 1446, 1494, 1503, 1584
ApeKI GCWGC 3 cut(s) 397, 1439, 1538
ApoI RAATTY 4 cut(s) 325, 540, 963, 1388
ArsI GACNNNNNNTTYG 2 cut(s) 760, 792
Asp700I GAANNNNTTC 3 cut(s) 69, 540, 1398
AspS9I GGNCC 3 cut(s) 804, 811, 1191
AsuC2I CCSGG 1 cut(s) 954
AsuHPI GGTGA 1 cut(s) 236
AvaI CYCGRG 1 cut(s) 500
AvaII GGWCC 2 cut(s) 804, 1191
BaeGI GKGCMC 1 cut(s) 186
BaeI ACNNNNGTAYC 2 cut(s) 15, 48
BanII GRGCYC 2 cut(s) 429, 642
BbrPI CACGTG 1 cut(s) 1222
BbsI GAAGAC 2 cut(s) 692, 1266
Bbv12I GWGCWC 1 cut(s) 693
BbvI GCAGC 3 cut(s) 384, 1451, 1525
BccI CCATC 3 cut(s) 55, 256, 629
BceAI ACGGC 4 cut(s) 385, 1221, 1230, 1461
BciT130I CCWGG 2 cut(s) 248, 1110
BcnI CCSGG 1 cut(s) 954
BcoDI GTCTC 8 cut(s) 260, 286, 599, 651, 727, 734, 1479, 1521
BcuI ACTAGT 1 cut(s) 1418
BfaI CTAG 7 cut(s) 533, 656, 704, 1419, 1433, 1466, 1556
BfmI CTRYAG 2 cut(s) 27, 94
BglI GCCNNNNNGGC 1 cut(s) 1502
BglII AGATCT 1 cut(s) 1096
Bme1390I CCNGG 3 cut(s) 248, 954, 1110
Bme18I GGWCC 2 cut(s) 804, 1191
BmeT110I CYCGRG 1 cut(s) 500
BmgT120I GGNCC 3 cut(s) 804, 811, 1191
BmrFI CCNGG 3 cut(s) 248, 954, 1110
BmrI ACTGGG 1 cut(s) 219
BmsI GCATC 3 cut(s) 862, 1369, 1724
BmuI ACTGGG 1 cut(s) 219
BpiI GAAGAC 2 cut(s) 692, 1266
BplI GAGNNNNNCTC 2 cut(s) 494, 526
BpmI CTGGAG 1 cut(s) 380
BpuEI CTTGAG 5 cut(s) 245, 308, 413, 626, 758
BpuMI CCSGG 1 cut(s) 954
BsaAI YACGTR 1 cut(s) 1222
BsaBI GATNNNNATC 2 cut(s) 240, 1101
BsaI GGTCTC 1 cut(s) 599
BsaJI CCNNGG 7 cut(s) 125, 807, 1109, 1363, 1443, 1533, 1581
BsaWI WCCGGW 2 cut(s) 331, 1188
BsaXI ACNNNNNCTCC 2 cut(s) 598, 628
Bsc4I CCNNNNNNNGG 3 cut(s) 1200, 1455, 1593
Bse1I ACTGG 5 cut(s) 214, 686, 1205, 1641, 1694
Bse3DI GCAATG 1 cut(s) 569
Bse8I GATNNNNATC 2 cut(s) 240, 1101
BseAI TCCGGA 1 cut(s) 331
BseBI CCWGG 2 cut(s) 248, 1110
BseDI CCNNGG 7 cut(s) 125, 807, 1109, 1363, 1443, 1533, 1581
BseGI GGATG 6 cut(s) 210, 527, 874, 1464, 1554, 1715
BseJI GATNNNNATC 2 cut(s) 240, 1101
BseLI CCNNNNNNNGG 3 cut(s) 1200, 1455, 1593
BseMI GCAATG 1 cut(s) 569
BseMII CTCAG 1 cut(s) 221
BseNI ACTGG 5 cut(s) 214, 686, 1205, 1641, 1694
BseSI GKGCMC 1 cut(s) 186
BseX3I CGGCCG 3 cut(s) 1446, 1494, 1584
BseXI GCAGC 3 cut(s) 384, 1451, 1525
BsgI GTGCAG 1 cut(s) 436
Bsh1236I CGCG 2 cut(s) 1535, 1583
Bsh1285I CGRYCG 3 cut(s) 1449, 1497, 1587
BshFI GGCC 7 cut(s) 812, 1245, 1368, 1448, 1496, 1505, 1586
BsiEI CGRYCG 3 cut(s) 1449, 1497, 1587
BsiHKAI GWGCWC 1 cut(s) 693
BsiHKCI CYCGRG 1 cut(s) 500
BsiSI CCGG 3 cut(s) 332, 953, 1189
BslFI GGGAC 3 cut(s) 178, 394, 1185
BslI CCNNNNNNNGG 3 cut(s) 1200, 1455, 1593
BsmAI GTCTC 8 cut(s) 260, 286, 599, 651, 727, 734, 1479, 1521
BsmFI GGGAC 3 cut(s) 178, 394, 1185
BsnI GGCC 7 cut(s) 812, 1245, 1368, 1448, 1496, 1505, 1586
Bso31I GGTCTC 1 cut(s) 599
BsoBI CYCGRG 1 cut(s) 500
Bsp1286I GDGCHC 4 cut(s) 186, 429, 642, 693
Bsp13I TCCGGA 1 cut(s) 331
Bsp143I GATC 8 cut(s) 213, 298, 658, 781, 995, 1096, 1216, 1309
Bsp19I CCATGG 1 cut(s) 125
BspANI GGCC 7 cut(s) 812, 1245, 1368, 1448, 1496, 1505, 1586
BspCNI CTCAG 1 cut(s) 222
BspEI TCCGGA 1 cut(s) 331
BspFNI CGCG 2 cut(s) 1535, 1583
BspMAI CTGCAG 1 cut(s) 31
BspPI GGATC 4 cut(s) 221, 653, 789, 1003
BspQI GCTCTTC 1 cut(s) 387
BspTNI GGTCTC 1 cut(s) 599
BsrBI CCGCTC 1 cut(s) 670
BsrDI GCAATG 1 cut(s) 569
BsrI ACTGG 5 cut(s) 214, 686, 1205, 1641, 1694
BssECI CCNNGG 7 cut(s) 125, 807, 1109, 1363, 1443, 1533, 1581
BssMI GATC 8 cut(s) 213, 298, 658, 781, 995, 1096, 1216, 1309
BssT1I CCWWGG 2 cut(s) 125, 1363
Bst2UI CCWGG 2 cut(s) 248, 1110
Bst4CI ACNGT 7 cut(s) 95, 181, 848, 1145, 1162, 1320, 1684
Bst6I CTCTTC 3 cut(s) 193, 387, 702
BstBAI YACGTR 1 cut(s) 1222
BstC8I GCNNGC 1 cut(s) 668
BstDEI CTNAG 4 cut(s) 10, 230, 580, 1507
BstDSI CCRYGG 4 cut(s) 125, 1443, 1533, 1581
BstF5I GGATG 6 cut(s) 210, 527, 874, 1464, 1554, 1715
BstFNI CGCG 2 cut(s) 1535, 1583
BstKTI GATC 8 cut(s) 216, 301, 661, 784, 998, 1099, 1219, 1312
BstMAI GTCTC 8 cut(s) 260, 286, 599, 651, 727, 734, 1479, 1521
BstMBI GATC 8 cut(s) 213, 298, 658, 781, 995, 1096, 1216, 1309
BstMCI CGRYCG 3 cut(s) 1449, 1497, 1587
BstMWI GCNNNNNNNGC 6 cut(s) 558, 1021, 1071, 1445, 1448, 1502
BstNI CCWGG 2 cut(s) 248, 1110
BstSCI CCNGG 3 cut(s) 246, 952, 1108
BstSFI CTRYAG 2 cut(s) 27, 94
BstSLI GKGCMC 1 cut(s) 186
BstUI CGCG 2 cut(s) 1535, 1583
BstV1I GCAGC 3 cut(s) 384, 1451, 1525
BstV2I GAAGAC 2 cut(s) 692, 1266
BstX2I RGATCY 3 cut(s) 658, 995, 1096
BstYI RGATCY 3 cut(s) 658, 995, 1096
BstZI CGGCCG 3 cut(s) 1446, 1494, 1584
BsuRI GGCC 7 cut(s) 812, 1245, 1368, 1448, 1496, 1505, 1586
BtgI CCRYGG 4 cut(s) 125, 1443, 1533, 1581
BtsCI GGATG 6 cut(s) 210, 527, 874, 1464, 1554, 1715
BtsI GCAGTG 1 cut(s) 1488
BtsIMutI CAGTG 5 cut(s) 186, 693, 762, 1150, 1488
Cac8I GCNNGC 1 cut(s) 668
CciNI GCGGCCGC 2 cut(s) 1494, 1584
Cfr13I GGNCC 3 cut(s) 804, 811, 1191
Cfr42I CCGCGG 2 cut(s) 1536, 1584
CpoI CGGWCCG 1 cut(s) 1191
CsiI ACCWGGT 1 cut(s) 246
Csp6I GTAC 1 cut(s) 1186
CspI CGGWCCG 1 cut(s) 1191
CviAII CATG 5 cut(s) 126, 598, 696, 935, 1330
CviQI GTAC 1 cut(s) 1186
DdeI CTNAG 4 cut(s) 10, 230, 580, 1507
DpnI GATC 8 cut(s) 215, 300, 660, 783, 997, 1098, 1218, 1311
DpnII GATC 8 cut(s) 213, 298, 658, 781, 995, 1096, 1216, 1309
DraI TTTAAA 1 cut(s) 492
EaeI YGGCCR 3 cut(s) 1446, 1494, 1584
EagI CGGCCG 3 cut(s) 1446, 1494, 1584
Eam1104I CTCTTC 3 cut(s) 193, 387, 702
EarI CTCTTC 3 cut(s) 193, 387, 702
EclXI CGGCCG 3 cut(s) 1446, 1494, 1584
Eco130I CCWWGG 2 cut(s) 125, 1363
Eco24I GRGCYC 2 cut(s) 429, 642
Eco31I GGTCTC 1 cut(s) 599
Eco47I GGWCC 2 cut(s) 804, 1191
Eco52I CGGCCG 3 cut(s) 1446, 1494, 1584
Eco72I CACGTG 1 cut(s) 1222
Eco88I CYCGRG 1 cut(s) 500
EcoRII CCWGG 2 cut(s) 246, 1108
EcoT14I CCWWGG 2 cut(s) 125, 1363
EcoT38I GRGCYC 2 cut(s) 429, 642
ErhI CCWWGG 2 cut(s) 125, 1363
FaeI CATG 5 cut(s) 129, 601, 699, 938, 1333
FalI AAGNNNNNCTT 2 cut(s) 1632, 1664
FaqI GGGAC 3 cut(s) 178, 394, 1185
FatI CATG 5 cut(s) 125, 597, 695, 934, 1329
FauNDI CATATG 1 cut(s) 928
FokI GGATG 6 cut(s) 217, 534, 881, 1471, 1561, 1702
FriOI GRGCYC 2 cut(s) 429, 642
FspBI CTAG 7 cut(s) 533, 656, 704, 1419, 1433, 1466, 1556
GsuI CTGGAG 1 cut(s) 380
HaeIII GGCC 7 cut(s) 812, 1245, 1368, 1448, 1496, 1505, 1586
HapII CCGG 3 cut(s) 332, 953, 1189
Hin1II CATG 5 cut(s) 129, 601, 699, 938, 1333
HincII GTYRAC 1 cut(s) 1687
HindII GTYRAC 1 cut(s) 1687
HindIII AAGCTT 2 cut(s) 559, 1013
HinfI GANTC 5 cut(s) 82, 109, 415, 1037, 1129
HpaII CCGG 3 cut(s) 332, 953, 1189
HphI GGTGA 1 cut(s) 236
Hpy166II GTNNAC 3 cut(s) 1316, 1424, 1687
Hpy188I TCNGA 5 cut(s) 884, 1033, 1258, 1279, 1386
Hpy8I GTNNAC 3 cut(s) 1316, 1424, 1687
HpyCH4III ACNGT 7 cut(s) 95, 181, 848, 1145, 1162, 1320, 1684
HpyCH4IV ACGT 2 cut(s) 919, 1221
HpyF10VI GCNNNNNNNGC 6 cut(s) 558, 1021, 1071, 1445, 1448, 1502
HpyF3I CTNAG 4 cut(s) 10, 230, 580, 1507
HpySE526I ACGT 2 cut(s) 919, 1221
Hsp92II CATG 5 cut(s) 129, 601, 699, 938, 1333
Kpn2I TCCGGA 1 cut(s) 331
KspI CCGCGG 2 cut(s) 1536, 1584
Kzo9I GATC 8 cut(s) 213, 298, 658, 781, 995, 1096, 1216, 1309
LguI GCTCTTC 1 cut(s) 387
LmnI GCTCC 3 cut(s) 343, 696, 1436
Lsp1109I GCAGC 3 cut(s) 384, 1451, 1525
LweI GCATC 3 cut(s) 862, 1369, 1724
MabI ACCWGGT 1 cut(s) 246
MaeI CTAG 7 cut(s) 533, 656, 704, 1419, 1433, 1466, 1556
MaeII ACGT 2 cut(s) 919, 1221
MaeIII GTNAC 5 cut(s) 89, 757, 857, 1414, 1624
MalI GATC 8 cut(s) 215, 300, 660, 783, 997, 1098, 1218, 1311
MbiI CCGCTC 1 cut(s) 670
MboI GATC 8 cut(s) 213, 298, 658, 781, 995, 1096, 1216, 1309
MflI RGATCY 3 cut(s) 658, 995, 1096
MhlI GDGCHC 4 cut(s) 186, 429, 642, 693
MmeI TCCRAC 1 cut(s) 693
MroI TCCGGA 1 cut(s) 331
MroXI GAANNNNTTC 3 cut(s) 69, 540, 1398
MslI CAYNNNNRTG 2 cut(s) 199, 724
MspA1I CMGCKG 2 cut(s) 1535, 1583
MspI CCGG 3 cut(s) 332, 953, 1189
MspR9I CCNGG 3 cut(s) 248, 954, 1110
MvaI CCWGG 2 cut(s) 248, 1110
MvnI CGCG 2 cut(s) 1535, 1583
MwoI GCNNNNNNNGC 6 cut(s) 558, 1021, 1071, 1445, 1448, 1502
NciI CCSGG 1 cut(s) 954
NcoI CCATGG 1 cut(s) 125
NdeI CATATG 1 cut(s) 928
NdeII GATC 8 cut(s) 213, 298, 658, 781, 995, 1096, 1216, 1309
NlaIII CATG 5 cut(s) 129, 601, 699, 938, 1333
NmuCI GTSAC 2 cut(s) 757, 1624
NotI GCGGCCGC 2 cut(s) 1494, 1584
OliI CACNNNNGTG 1 cut(s) 724
PaeR7I CTCGAG 1 cut(s) 500
PciSI GCTCTTC 1 cut(s) 387
PdmI GAANNNNTTC 3 cut(s) 69, 540, 1398
PfeI GAWTC 5 cut(s) 82, 109, 415, 1037, 1129
PflFI GACNNNGTC 1 cut(s) 745
PfoI TCCNGGA 1 cut(s) 952
PmaCI CACGTG 1 cut(s) 1222
PmlI CACGTG 1 cut(s) 1222
Ppu21I YACGTR 1 cut(s) 1222
Psp1406I AACGTT 1 cut(s) 919
Psp6I CCWGG 2 cut(s) 246, 1108
PspCI CACGTG 1 cut(s) 1222
PspGI CCWGG 2 cut(s) 246, 1108
PspPI GGNCC 3 cut(s) 804, 811, 1191
PstI CTGCAG 1 cut(s) 31
PsuI RGATCY 3 cut(s) 658, 995, 1096
PsyI GACNNNGTC 1 cut(s) 745
RsaI GTAC 1 cut(s) 1187
RsaNI GTAC 1 cut(s) 1186
RseI CAYNNNNRTG 2 cut(s) 199, 724
Rsr2I CGGWCCG 1 cut(s) 1191
RsrII CGGWCCG 1 cut(s) 1191
SacII CCGCGG 2 cut(s) 1536, 1584
SapI GCTCTTC 1 cut(s) 387
Sau3AI GATC 8 cut(s) 213, 298, 658, 781, 995, 1096, 1216, 1309
Sau96I GGNCC 3 cut(s) 804, 811, 1191
ScrFI CCNGG 3 cut(s) 248, 954, 1110
SduI GDGCHC 4 cut(s) 186, 429, 642, 693
SexAI ACCWGGT 1 cut(s) 246
SfaNI GCATC 3 cut(s) 862, 1369, 1724
SfcI CTRYAG 2 cut(s) 27, 94
SfiI GGCCNNNNNGGCC 1 cut(s) 1502
Sfr274I CTCGAG 1 cut(s) 500
Sfr303I CCGCGG 2 cut(s) 1536, 1584
SgrBI CCGCGG 2 cut(s) 1536, 1584
SinI GGWCC 2 cut(s) 804, 1191
SlaI CTCGAG 1 cut(s) 500
SmiMI CAYNNNNRTG 2 cut(s) 199, 724
SmlI CTYRAG 6 cut(s) 224, 287, 428, 500, 641, 737
SmoI CTYRAG 6 cut(s) 224, 287, 428, 500, 641, 737
SpeI ACTAGT 1 cut(s) 1418
SspI AATATT 1 cut(s) 1009
SspMI CTAG 7 cut(s) 533, 656, 704, 1419, 1433, 1466, 1556
StyD4I CCNGG 3 cut(s) 246, 952, 1108
StyI CCWWGG 2 cut(s) 125, 1363
TaaI ACNGT 7 cut(s) 95, 181, 848, 1145, 1162, 1320, 1684
TaiI ACGT 2 cut(s) 922, 1224
TaqI TCGA 4 cut(s) 116, 501, 985, 1525
TaqII GACCGA 2 cut(s) 821, 1208
TauI GCSGC 7 cut(s) 673, 1451, 1496, 1499, 1538, 1586, 1589
TfiI GAWTC 5 cut(s) 82, 109, 415, 1037, 1129
TscAI CASTG 5 cut(s) 186, 693, 762, 1150, 1495
TseFI GTSAC 2 cut(s) 757, 1624
TseI GCWGC 3 cut(s) 397, 1439, 1538
Tsp45I GTSAC 2 cut(s) 757, 1624
TspDTI ATGAA 8 cut(s) 149, 807, 1019, 1107, 1275, 1346, 1475, 1565
TspGWI ACGGA 2 cut(s) 651, 1004
TspRI CASTG 5 cut(s) 186, 693, 762, 1150, 1495
Tth111I GACNNNGTC 1 cut(s) 745
VpaK11BI GGWCC 2 cut(s) 804, 1191
XapI RAATTY 4 cut(s) 325, 540, 963, 1388
XbaI TCTAGA 1 cut(s) 703
XcmI CCANNNNNNNNNTGG 1 cut(s) 821
XhoI CTCGAG 1 cut(s) 500
XmnI GAANNNNTTC 3 cut(s) 69, 540, 1398
XspI CTAG 7 cut(s) 533, 656, 704, 1419, 1433, 1466, 1556
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.