TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 193 |
| AciI | CCGC | 1 cut(s) | 88 |
| AclI | AACGTT | 1 cut(s) | 403 |
| AclWI | GGATC | 1 cut(s) | 874 |
| AcsI | RAATTY | 1 cut(s) | 769 |
| AdeI | CACNNNGTG | 1 cut(s) | 261 |
| AfaI | GTAC | 2 cut(s) | 354, 905 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 863 |
| AflII | CTTAAG | 1 cut(s) | 437 |
| AgsI | TTSAA | 9 cut(s) | 398, 409, 416, 492, 547, 593, 599, 620, 737 |
| AjiI | CACGTC | 1 cut(s) | 924 |
| AluBI | AGCT | 8 cut(s) | 200, 217, 243, 394, 412, 464, 567, 740 |
| AluI | AGCT | 8 cut(s) | 200, 217, 243, 394, 412, 464, 567, 740 |
| AlwI | GGATC | 1 cut(s) | 874 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 512 |
| AoxI | GGCC | 1 cut(s) | 583 |
| ApeKI | GCWGC | 4 cut(s) | 23, 26, 116, 464 |
| ApoI | RAATTY | 1 cut(s) | 769 |
| AspS9I | GGNCC | 1 cut(s) | 583 |
| AsuC2I | CCSGG | 1 cut(s) | 502 |
| AsuHPI | GGTGA | 5 cut(s) | 30, 89, 91, 235, 707 |
| AsuII | TTCGAA | 1 cut(s) | 127 |
| BauI | CACGAG | 1 cut(s) | 275 |
| BbvI | GCAGC | 4 cut(s) | 10, 13, 103, 451 |
| BccI | CCATC | 2 cut(s) | 299, 865 |
| BclI | TGATCA | 1 cut(s) | 225 |
| BcnI | CCSGG | 1 cut(s) | 502 |
| BfaI | CTAG | 3 cut(s) | 194, 287, 587 |
| BfmI | CTRYAG | 1 cut(s) | 861 |
| BfrI | CTTAAG | 1 cut(s) | 437 |
| BfuAI | ACCTGC | 1 cut(s) | 193 |
| BisI | GCNGC | 4 cut(s) | 24, 27, 117, 465 |
| BlsI | GCNGC | 4 cut(s) | 25, 28, 118, 466 |
| Bme1390I | CCNGG | 1 cut(s) | 502 |
| BmgBI | CACGTC | 1 cut(s) | 924 |
| BmgT120I | GGNCC | 1 cut(s) | 583 |
| BmiI | GGNNCC | 1 cut(s) | 889 |
| BmrFI | CCNGG | 1 cut(s) | 502 |
| BmsI | GCATC | 3 cut(s) | 281, 370, 439 |
| Bpu14I | TTCGAA | 1 cut(s) | 127 |
| BpuEI | CTTGAG | 2 cut(s) | 182, 553 |
| BpuMI | CCSGG | 1 cut(s) | 502 |
| Bsa29I | ATCGAT | 1 cut(s) | 869 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 876, 906 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 863 |
| BseCI | ATCGAT | 1 cut(s) | 869 |
| BseGI | GGATG | 7 cut(s) | 178, 274, 296, 310, 355, 454, 652 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 863 |
| BseXI | GCAGC | 4 cut(s) | 10, 13, 103, 451 |
| BshFI | GGCC | 1 cut(s) | 585 |
| BshVI | ATCGAT | 1 cut(s) | 869 |
| BsiSI | CCGG | 1 cut(s) | 501 |
| BslFI | GGGAC | 1 cut(s) | 517 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 863 |
| BsmFI | GGGAC | 1 cut(s) | 517 |
| BsnI | GGCC | 1 cut(s) | 585 |
| Bsp119I | TTCGAA | 1 cut(s) | 127 |
| Bsp143I | GATC | 3 cut(s) | 225, 866, 870 |
| BspACI | CCGC | 1 cut(s) | 88 |
| BspANI | GGCC | 1 cut(s) | 585 |
| BspDI | ATCGAT | 1 cut(s) | 869 |
| BspLI | GGNNCC | 1 cut(s) | 889 |
| BspMI | ACCTGC | 1 cut(s) | 193 |
| BspPI | GGATC | 1 cut(s) | 874 |
| BspT104I | TTCGAA | 1 cut(s) | 127 |
| BspTI | CTTAAG | 1 cut(s) | 437 |
| BssMI | GATC | 3 cut(s) | 225, 866, 870 |
| BssSI | CACGAG | 1 cut(s) | 275 |
| Bst2BI | CACGAG | 1 cut(s) | 275 |
| Bst4CI | ACNGT | 1 cut(s) | 312 |
| Bst6I | CTCTTC | 2 cut(s) | 19, 730 |
| BstAFI | CTTAAG | 1 cut(s) | 437 |
| BstBI | TTCGAA | 1 cut(s) | 127 |
| BstC8I | GCNNGC | 1 cut(s) | 742 |
| BstDEI | CTNAG | 1 cut(s) | 65 |
| BstF5I | GGATG | 7 cut(s) | 178, 274, 296, 310, 355, 454, 652 |
| BstKTI | GATC | 3 cut(s) | 228, 869, 873 |
| BstMBI | GATC | 3 cut(s) | 225, 866, 870 |
| BstSCI | CCNGG | 1 cut(s) | 500 |
| BstSFI | CTRYAG | 1 cut(s) | 861 |
| BstV1I | GCAGC | 4 cut(s) | 10, 13, 103, 451 |
| Bsu15I | ATCGAT | 1 cut(s) | 869 |
| BsuRI | GGCC | 1 cut(s) | 585 |
| BsuTUI | ATCGAT | 1 cut(s) | 869 |
| BtrI | CACGTC | 1 cut(s) | 924 |
| BtsCI | GGATG | 7 cut(s) | 178, 274, 296, 310, 355, 454, 652 |
| BveI | ACCTGC | 1 cut(s) | 193 |
| Cac8I | GCNNGC | 1 cut(s) | 742 |
| CaiI | CAGNNNCTG | 1 cut(s) | 512 |
| Cfr13I | GGNCC | 1 cut(s) | 583 |
| ClaI | ATCGAT | 1 cut(s) | 869 |
| Csp6I | GTAC | 2 cut(s) | 353, 904 |
| CviAII | CATG | 3 cut(s) | 113, 258, 673 |
| CviQI | GTAC | 2 cut(s) | 353, 904 |
| DdeI | CTNAG | 1 cut(s) | 65 |
| DpnI | GATC | 3 cut(s) | 227, 868, 872 |
| DpnII | GATC | 3 cut(s) | 225, 866, 870 |
| DraI | TTTAAA | 1 cut(s) | 579 |
| DraIII | CACNNNGTG | 1 cut(s) | 261 |
| Eam1104I | CTCTTC | 2 cut(s) | 19, 730 |
| EarI | CTCTTC | 2 cut(s) | 19, 730 |
| EcoO109I | RGGNCCY | 1 cut(s) | 583 |
| EcoT22I | ATGCAT | 1 cut(s) | 385 |
| FaeI | CATG | 3 cut(s) | 116, 261, 676 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 232, 264 |
| FaqI | GGGAC | 1 cut(s) | 517 |
| FatI | CATG | 3 cut(s) | 112, 257, 672 |
| FauI | CCCGC | 1 cut(s) | 95 |
| FbaI | TGATCA | 1 cut(s) | 225 |
| Fnu4HI | GCNGC | 4 cut(s) | 24, 27, 117, 465 |
| FokI | GGATG | 7 cut(s) | 185, 281, 303, 317, 362, 461, 659 |
| Fsp4HI | GCNGC | 4 cut(s) | 24, 27, 117, 465 |
| FspBI | CTAG | 3 cut(s) | 194, 287, 587 |
| GluI | GCNGC | 4 cut(s) | 24, 27, 117, 465 |
| HaeIII | GGCC | 1 cut(s) | 585 |
| HapII | CCGG | 1 cut(s) | 501 |
| Hin1II | CATG | 3 cut(s) | 116, 261, 676 |
| HindIII | AAGCTT | 4 cut(s) | 215, 392, 410, 738 |
| HinfI | GANTC | 5 cut(s) | 515, 620, 638, 720, 853 |
| HpaII | CCGG | 1 cut(s) | 501 |
| HphI | GGTGA | 5 cut(s) | 30, 89, 91, 235, 707 |
| Hpy166II | GTNNAC | 1 cut(s) | 344 |
| Hpy188I | TCNGA | 4 cut(s) | 74, 182, 646, 775 |
| Hpy188III | TCNNGA | 3 cut(s) | 194, 266, 916 |
| Hpy8I | GTNNAC | 1 cut(s) | 344 |
| Hpy99I | CGWCG | 1 cut(s) | 925 |
| HpyAV | CCTTC | 4 cut(s) | 119, 200, 413, 770 |
| HpyCH4III | ACNGT | 1 cut(s) | 312 |
| HpyCH4IV | ACGT | 2 cut(s) | 403, 923 |
| HpyCH4V | TGCA | 7 cut(s) | 280, 294, 377, 383, 457, 561, 654 |
| HpyF3I | CTNAG | 1 cut(s) | 65 |
| HpySE526I | ACGT | 2 cut(s) | 403, 923 |
| Hsp92II | CATG | 3 cut(s) | 116, 261, 676 |
| Ksp22I | TGATCA | 1 cut(s) | 225 |
| Kzo9I | GATC | 3 cut(s) | 225, 866, 870 |
| LmnI | GCTCC | 1 cut(s) | 893 |
| LpnPI | CCDG | 7 cut(s) | 115, 198, 251, 332, 350, 462, 514 |
| Lsp1109I | GCAGC | 4 cut(s) | 10, 13, 103, 451 |
| LweI | GCATC | 3 cut(s) | 281, 370, 439 |
| MaeI | CTAG | 3 cut(s) | 194, 287, 587 |
| MaeII | ACGT | 2 cut(s) | 403, 923 |
| MaeIII | GTNAC | 2 cut(s) | 36, 624 |
| MalI | GATC | 3 cut(s) | 227, 868, 872 |
| MboI | GATC | 3 cut(s) | 225, 866, 870 |
| MboII | GAAGA | 6 cut(s) | 6, 57, 243, 410, 428, 717 |
| MluCI | AATT | 5 cut(s) | 551, 574, 594, 615, 769 |
| MlyI | GAGTC | 2 cut(s) | 714, 847 |
| MnlI | CCTC | 9 cut(s) | 22, 28, 51, 68, 73, 161, 438, 502, 878 |
| Mph1103I | ATGCAT | 1 cut(s) | 385 |
| MseI | TTAA | 5 cut(s) | 438, 578, 753, 849, 878 |
| MslI | CAYNNNNRTG | 1 cut(s) | 111 |
| MspCI | CTTAAG | 1 cut(s) | 437 |
| MspI | CCGG | 1 cut(s) | 501 |
| MspR9I | CCNGG | 1 cut(s) | 502 |
| NciI | CCSGG | 1 cut(s) | 502 |
| NdeII | GATC | 3 cut(s) | 225, 866, 870 |
| NlaIII | CATG | 3 cut(s) | 116, 261, 676 |
| NlaIV | GGNNCC | 1 cut(s) | 889 |
| NmuCI | GTSAC | 1 cut(s) | 36 |
| NsiI | ATGCAT | 1 cut(s) | 385 |
| NspV | TTCGAA | 1 cut(s) | 127 |
| PfeI | GAWTC | 3 cut(s) | 515, 620, 638 |
| PkrI | GCNGC | 4 cut(s) | 25, 28, 118, 466 |
| PleI | GAGTC | 2 cut(s) | 714, 847 |
| PpsI | GAGTC | 2 cut(s) | 714, 847 |
| Psp1406I | AACGTT | 1 cut(s) | 403 |
| PspN4I | GGNNCC | 1 cut(s) | 889 |
| PspPI | GGNCC | 1 cut(s) | 583 |
| PsrI | GAACNNNNNNTAC | 1 cut(s) | 896 |
| PstNI | CAGNNNCTG | 1 cut(s) | 512 |
| RsaI | GTAC | 2 cut(s) | 354, 905 |
| RsaNI | GTAC | 2 cut(s) | 353, 904 |
| RseI | CAYNNNNRTG | 1 cut(s) | 111 |
| SaqAI | TTAA | 5 cut(s) | 438, 578, 753, 849, 878 |
| SatI | GCNGC | 4 cut(s) | 24, 27, 117, 465 |
| Sau3AI | GATC | 3 cut(s) | 225, 866, 870 |
| Sau96I | GGNCC | 1 cut(s) | 583 |
| SchI | GAGTC | 2 cut(s) | 714, 847 |
| ScrFI | CCNGG | 1 cut(s) | 502 |
| SfaNI | GCATC | 3 cut(s) | 281, 370, 439 |
| SfcI | CTRYAG | 1 cut(s) | 861 |
| SfuI | TTCGAA | 1 cut(s) | 127 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 111 |
| SmlI | CTYRAG | 3 cut(s) | 161, 437, 568 |
| SmoI | CTYRAG | 3 cut(s) | 161, 437, 568 |
| Sse9I | AATT | 5 cut(s) | 551, 574, 594, 615, 769 |
| SsiI | CCGC | 1 cut(s) | 88 |
| SspI | AATATT | 1 cut(s) | 847 |
| SspMI | CTAG | 3 cut(s) | 194, 287, 587 |
| StyD4I | CCNGG | 1 cut(s) | 500 |
| TaaI | ACNGT | 1 cut(s) | 312 |
| TaiI | ACGT | 2 cut(s) | 406, 926 |
| TaqI | TCGA | 4 cut(s) | 43, 127, 534, 869 |
| TasI | AATT | 5 cut(s) | 551, 574, 594, 615, 769 |
| TfiI | GAWTC | 3 cut(s) | 515, 620, 638 |
| Tru1I | TTAA | 5 cut(s) | 438, 578, 753, 849, 878 |
| Tru9I | TTAA | 5 cut(s) | 438, 578, 753, 849, 878 |
| TseFI | GTSAC | 1 cut(s) | 36 |
| TseI | GCWGC | 4 cut(s) | 23, 26, 116, 464 |
| Tsp45I | GTSAC | 1 cut(s) | 36 |
| TspDTI | ATGAA | 5 cut(s) | 101, 189, 285, 630, 822 |
| TspGWI | ACGGA | 2 cut(s) | 801, 880 |
| Vha464I | CTTAAG | 1 cut(s) | 437 |
| XapI | RAATTY | 1 cut(s) | 769 |
| XbaI | TCTAGA | 1 cut(s) | 193 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 262 |
| XspI | CTAG | 3 cut(s) | 194, 287, 587 |
| Zsp2I | ATGCAT | 1 cut(s) | 385 |