pycom05g14120

Toll - interleukin 1 - resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
17629273 .. 17630718
1446 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g14120.1

Sequence Viewer

Length: 1446 bp
ATGCCAGGAAGTATTCAATACTTAAATTTAAAATGCGCTGGTTTAAAGGAGGTGCCTGAATCAGTTTGGTCTAACGAAAATATTTCTTACTTGAATATAACTAATTGCAGTTACCTCGAGAAACTTCCAAGCAGCAGGTGTAAGTTGAAAAATCTCAATCTCGATAGGTGCTCCAATTTTGAAAACTTTCCAGAGATTTTGGAGCCAGTGGAACTTTTGAAGTCCTTAAGTTTAATTCAAACAGCAGTTACAGAGCTACCCTCATCGATCTGTAACTTGAAATATCTTGAGAGTCTCGATCTCGCCGAGTGCTCTAGATTTTCCAAATTCCCTGAAATCTTGAAGCCAATGGAACAATTGGTGTCTCTTAGTTTGGAATGCACAGCTGTCGAAATGCTTCCTTCGTCAATTGGAAATCTAAATAGGCTTCAAGATTTAAACCTTAGTTGGTGCACGCAACTTAAGGATTTCCCAACAAGTATCCCCAGTTTAACCAATCTTAAACGTCTCAAATTTAAGGGCTGTTGGAGACTTGAAAAATTGCCTTCCACTCTCTGTTTTCGCTCTTTAGAAAAACTAGAACTCAGCCAGAGCGGTATATTGGAAATACCAGCAAGCATCAAACAAGCTTCTCGGTTGTCTATGCTCGACTTAAAGAACTGCAAGCGGCTTCAATCTATACCAGAGCTCCCAGTGCTATGTGATGTTGACGCTGAAGGCTGCCCGTCGCTGAAGATAGTGTCAAGTTCACGGACAGCACTCACACAAGGTTGGGATAAGCCTAATTATTGTTGCAGAATCTTTACTAATTGCCCAAAATTGGATAATAATTCAAGGAGCAACATAATGGATGAAGCACAGATTGCAATTATGCGAATGGCAACTGTTGCGCCATTAAAGGACTATTGCTTGCCTCATAATCCCTGGCCTCAGATTAAGATTGCATATTCAGGAAAAGAAATTCCAAATTGGTTCAGCTATCAAAATGATGGATCTTCAGTAGACATCGAGCTTTGTCCAGATTGGTTTCGAACAGGTTTATTTGGTTTCGCTCTCTCTGTTGTTGTTGGTCTTTCTGGGTTTATTGTGGGGTATGCCGTCTGGAGTGTAAGAGCTAATTTCATTGTCAAATTCATGGGTGAAAGCCATGAACTGTTCAGTTCTGAGTACATTATCAAAGGCCCCGATATCGGCCAACATCACGTGCATGTGTGGAATGAGGCCTTTAGAAGTGAAGAGGTAGAGGTAGGAAAAAACTGCTCCCCTGATGTTTACAAACTTGCCAAAGAGGCCTCTGTTGTCTTCTGCCTGGTAGATTGGAAAGGACGACCTGCTTCTGCGTCCTCTTTGAAGGTGGAAAGCTGTGGTATATGCCCATTGTATGCGGAAGATGCTGAGAAATTCAAATTTGGTCATGTGTTCACAAGTCGAGGGGACCAAAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

482

Amino Acids

54.05

Weight (kDa)

6.37

Isoelectric Point (pI)

42.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 73 - 173 9.9e-14 Leucine-rich repeat region
LRR_13 PF23286 95 - 178 3e-11 Disease resistance protein RPS4B-like, leucine-rich repeats
C-JID PF20160 317 - 466 3.9e-13 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 126
Acc36I ACCTGC 2 cut(s) 126, 1339
AccB1I GGYRCC 1 cut(s) 52
AccBSI CCGCTC 1 cut(s) 594
AccI GTMKAC 1 cut(s) 1002
AciI CCGC 3 cut(s) 594, 667, 1385
AclWI GGATC 1 cut(s) 1000
AcoI YGGCCR 1 cut(s) 1192
AcsI RAATTY 7 cut(s) 25, 326, 512, 960, 1130, 1400, 1406
AcuI CTGAAG 3 cut(s) 735, 752, 981
AcvI CACGTG 1 cut(s) 1204
AfaI GTAC 1 cut(s) 1169
AfiI CCNNNNNNNGG 2 cut(s) 820, 1190
AflII CTTAAG 2 cut(s) 226, 461
AjnI CCWGG 3 cut(s) 4, 923, 1308
AluBI AGCT 8 cut(s) 256, 386, 629, 688, 978, 1012, 1115, 1362
AluI AGCT 8 cut(s) 256, 386, 629, 688, 978, 1012, 1115, 1362
Alw21I GWGCWC 4 cut(s) 173, 314, 455, 690
Alw26I GTCTC 4 cut(s) 299, 369, 512, 523
Alw44I GTGCAC 1 cut(s) 451
AlwI GGATC 1 cut(s) 1000
Ama87I CYCGRG 1 cut(s) 116
AoxI GGCC 5 cut(s) 926, 1180, 1192, 1221, 1290
ApaLI GTGCAC 1 cut(s) 451
ApeKI GCWGC 2 cut(s) 132, 720
ApoI RAATTY 7 cut(s) 25, 326, 512, 960, 1130, 1400, 1406
Asp700I GAANNNNTTC 2 cut(s) 186, 396
AspLEI GCGC 2 cut(s) 38, 892
AspS9I GGNCC 2 cut(s) 1181, 1435
AsuHPI GGTGA 1 cut(s) 1151
AsuII TTCGAA 1 cut(s) 1030
AvaI CYCGRG 1 cut(s) 116
AvaII GGWCC 1 cut(s) 1435
BaeGI GKGCMC 1 cut(s) 455
BanI GGYRCC 1 cut(s) 52
BanII GRGCYC 1 cut(s) 690
BbrPI CACGTG 1 cut(s) 1204
BbsI GAAGAC 1 cut(s) 1294
Bbv12I GWGCWC 4 cut(s) 173, 314, 455, 690
BbvI GCAGC 2 cut(s) 144, 707
BccI CCATC 1 cut(s) 983
BceAI ACGGC 1 cut(s) 1082
BcgI CGANNNNNNTGC 4 cut(s) 97, 131, 370, 404
BciT130I CCWGG 3 cut(s) 6, 925, 1310
BciVI GTATCC 1 cut(s) 491
BcoDI GTCTC 4 cut(s) 299, 369, 512, 523
BfaI CTAG 2 cut(s) 315, 578
BfrI CTTAAG 2 cut(s) 226, 461
BfuAI ACCTGC 2 cut(s) 126, 1339
BfuI GTATCC 1 cut(s) 491
BglI GCCNNNNNGGC 1 cut(s) 1289
BisI GCNGC 3 cut(s) 133, 668, 721
BlsI GCNGC 3 cut(s) 134, 669, 722
Bme1390I CCNGG 3 cut(s) 6, 925, 1310
Bme18I GGWCC 1 cut(s) 1435
BmeT110I CYCGRG 1 cut(s) 116
BmgT120I GGNCC 2 cut(s) 1181, 1435
BmiI GGNNCC 4 cut(s) 54, 204, 1183, 1436
BmrFI CCNGG 3 cut(s) 6, 925, 1310
BmrI ACTGGG 2 cut(s) 480, 686
BmsI GCATC 2 cut(s) 627, 1381
BmuI ACTGGG 2 cut(s) 480, 686
BpiI GAAGAC 1 cut(s) 1294
BplI GAGNNNNNCTC 2 cut(s) 245, 277
BpmI CTGGAG 1 cut(s) 1123
Bpu14I TTCGAA 1 cut(s) 1030
BpuEI CTTGAG 1 cut(s) 308
Bsa29I ATCGAT 1 cut(s) 266
BsaAI YACGTR 1 cut(s) 1204
BsaJI CCNNGG 1 cut(s) 923
BsaXI ACNNNNNCTCC 2 cut(s) 672, 702
Bsc4I CCNNNNNNNGG 2 cut(s) 820, 1190
Bse1I ACTGG 3 cut(s) 206, 486, 692
BseBI CCWGG 3 cut(s) 6, 925, 1310
BseCI ATCGAT 1 cut(s) 266
BseDI CCNNGG 1 cut(s) 923
BseGI GGATG 1 cut(s) 856
BseLI CCNNNNNNNGG 2 cut(s) 820, 1190
BseMII CTCAG 4 cut(s) 598, 944, 1155, 1386
BseNI ACTGG 3 cut(s) 206, 486, 692
BseSI GKGCMC 1 cut(s) 455
BseXI GCAGC 2 cut(s) 144, 707
BshFI GGCC 5 cut(s) 928, 1182, 1194, 1223, 1292
BshNI GGYRCC 1 cut(s) 52
BshVI ATCGAT 1 cut(s) 266
BsiHKAI GWGCWC 4 cut(s) 173, 314, 455, 690
BsiHKCI CYCGRG 1 cut(s) 116
BslI CCNNNNNNNGG 2 cut(s) 820, 1190
BsmAI GTCTC 4 cut(s) 299, 369, 512, 523
BsmBI CGTCTC 1 cut(s) 512
BsmI GAATGC 1 cut(s) 383
BsnI GGCC 5 cut(s) 928, 1182, 1194, 1223, 1292
BsoBI CYCGRG 1 cut(s) 116
Bsp119I TTCGAA 1 cut(s) 1030
Bsp1286I GDGCHC 4 cut(s) 173, 314, 455, 690
Bsp143I GATC 3 cut(s) 267, 298, 992
BspACI CCGC 3 cut(s) 594, 667, 1385
BspANI GGCC 5 cut(s) 928, 1182, 1194, 1223, 1292
BspCNI CTCAG 4 cut(s) 597, 943, 1156, 1387
BspDI ATCGAT 1 cut(s) 266
BspLI GGNNCC 4 cut(s) 54, 204, 1183, 1436
BspMI ACCTGC 2 cut(s) 126, 1339
BspPI GGATC 1 cut(s) 1000
BspT104I TTCGAA 1 cut(s) 1030
BspT107I GGYRCC 1 cut(s) 52
BspTI CTTAAG 2 cut(s) 226, 461
BsrBI CCGCTC 1 cut(s) 594
BsrI ACTGG 3 cut(s) 206, 486, 692
BssECI CCNNGG 1 cut(s) 923
BssMI GATC 3 cut(s) 267, 298, 992
Bst2UI CCWGG 3 cut(s) 6, 925, 1310
Bst4CI ACNGT 2 cut(s) 886, 1155
Bst6I CTCTTC 1 cut(s) 1230
BstAFI CTTAAG 2 cut(s) 226, 461
BstAPI GCANNNNNTGC 2 cut(s) 863, 887
BstBAI YACGTR 1 cut(s) 1204
BstBI TTCGAA 1 cut(s) 1030
BstC8I GCNNGC 4 cut(s) 455, 616, 665, 911
BstDEI CTNAG 6 cut(s) 368, 443, 584, 930, 1164, 1395
BstF5I GGATG 1 cut(s) 856
BstHHI GCGC 2 cut(s) 38, 892
BstKTI GATC 3 cut(s) 270, 301, 995
BstMAI GTCTC 4 cut(s) 299, 369, 512, 523
BstMBI GATC 3 cut(s) 267, 298, 992
BstMWI GCNNNNNNNGC 5 cut(s) 694, 863, 887, 1289, 1391
BstNI CCWGG 3 cut(s) 6, 925, 1310
BstNSI RCATGY 1 cut(s) 1211
BstSCI CCNGG 3 cut(s) 4, 923, 1308
BstSLI GKGCMC 1 cut(s) 455
BstV1I GCAGC 2 cut(s) 144, 707
BstV2I GAAGAC 1 cut(s) 1294
BstX2I RGATCY 1 cut(s) 992
BstYI RGATCY 1 cut(s) 992
Bsu15I ATCGAT 1 cut(s) 266
BsuI GTATCC 1 cut(s) 491
BsuRI GGCC 5 cut(s) 928, 1182, 1194, 1223, 1292
BsuTUI ATCGAT 1 cut(s) 266
BtsCI GGATG 1 cut(s) 856
BtsIMutI CAGTG 2 cut(s) 213, 699
BveI ACCTGC 2 cut(s) 126, 1339
Cac8I GCNNGC 4 cut(s) 455, 616, 665, 911
CfoI GCGC 2 cut(s) 38, 892
Cfr13I GGNCC 2 cut(s) 1181, 1435
ClaI ATCGAT 1 cut(s) 266
CseI GACGC 2 cut(s) 719, 1329
Csp6I GTAC 1 cut(s) 1168
CviAII CATG 4 cut(s) 1135, 1148, 1208, 1415
CviQI GTAC 1 cut(s) 1168
DdeI CTNAG 6 cut(s) 368, 443, 584, 930, 1164, 1395
DpnI GATC 3 cut(s) 269, 300, 994
DpnII GATC 3 cut(s) 267, 298, 992
DraI TTTAAA 3 cut(s) 30, 45, 438
EaeI YGGCCR 1 cut(s) 1192
Eam1104I CTCTTC 1 cut(s) 1230
EarI CTCTTC 1 cut(s) 1230
Ecl136II GAGCTC 1 cut(s) 688
Eco147I AGGCCT 2 cut(s) 1223, 1292
Eco24I GRGCYC 1 cut(s) 690
Eco32I GATATC 1 cut(s) 1189
Eco47I GGWCC 1 cut(s) 1435
Eco53kI GAGCTC 1 cut(s) 688
Eco57I CTGAAG 3 cut(s) 735, 752, 981
Eco72I CACGTG 1 cut(s) 1204
Eco88I CYCGRG 1 cut(s) 116
EcoICRI GAGCTC 1 cut(s) 688
EcoO109I RGGNCCY 1 cut(s) 1181
EcoRII CCWGG 3 cut(s) 4, 923, 1308
EcoRV GATATC 1 cut(s) 1189
EcoT38I GRGCYC 1 cut(s) 690
Esp3I CGTCTC 1 cut(s) 512
FaeI CATG 4 cut(s) 1138, 1151, 1211, 1418
FatI CATG 4 cut(s) 1134, 1147, 1207, 1414
FblI GTMKAC 1 cut(s) 1002
Fnu4HI GCNGC 3 cut(s) 133, 668, 721
FokI GGATG 1 cut(s) 863
FriOI GRGCYC 1 cut(s) 690
Fsp4HI GCNGC 3 cut(s) 133, 668, 721
FspBI CTAG 2 cut(s) 315, 578
GlaI GCGC 2 cut(s) 37, 891
GluI GCNGC 3 cut(s) 133, 668, 721
GsuI CTGGAG 1 cut(s) 1123
HaeIII GGCC 5 cut(s) 928, 1182, 1194, 1223, 1292
HgaI GACGC 2 cut(s) 719, 1329
HhaI GCGC 2 cut(s) 38, 892
Hin1II CATG 4 cut(s) 1138, 1151, 1211, 1418
Hin6I GCGC 2 cut(s) 36, 890
HinP1I GCGC 2 cut(s) 36, 890
HincII GTYRAC 1 cut(s) 709
HindII GTYRAC 1 cut(s) 709
HindIII AAGCTT 1 cut(s) 627
HinfI GANTC 3 cut(s) 59, 292, 798
HphI GGTGA 1 cut(s) 1151
Hpy166II GTNNAC 6 cut(s) 453, 709, 749, 1003, 1273, 1422
Hpy188I TCNGA 2 cut(s) 933, 1165
Hpy8I GTNNAC 6 cut(s) 453, 709, 749, 1003, 1273, 1422
Hpy99I CGWCG 1 cut(s) 730
HpyAV CCTTC 4 cut(s) 411, 555, 710, 1345
HpyCH4III ACNGT 2 cut(s) 886, 1155
HpyCH4IV ACGT 2 cut(s) 505, 1203
HpyCH4V TGCA 8 cut(s) 108, 381, 453, 663, 795, 866, 944, 1207
HpyF10VI GCNNNNNNNGC 5 cut(s) 694, 863, 887, 1289, 1391
HpyF3I CTNAG 6 cut(s) 368, 443, 584, 930, 1164, 1395
HpySE526I ACGT 2 cut(s) 505, 1203
Hsp92II CATG 4 cut(s) 1138, 1151, 1211, 1418
HspAI GCGC 2 cut(s) 36, 890
Kzo9I GATC 3 cut(s) 267, 298, 992
LmnI GCTCC 5 cut(s) 176, 202, 693, 837, 1265
Lsp1109I GCAGC 2 cut(s) 144, 707
LweI GCATC 2 cut(s) 627, 1381
MaeI CTAG 2 cut(s) 315, 578
MaeII ACGT 2 cut(s) 505, 1203
MaeIII GTNAC 3 cut(s) 110, 247, 272
MalI GATC 3 cut(s) 269, 300, 994
MbiI CCGCTC 1 cut(s) 594
MboI GATC 3 cut(s) 267, 298, 992
MboII GAAGA 5 cut(s) 745, 987, 1247, 1294, 1400
MfeI CAATTG 2 cut(s) 356, 408
MflI RGATCY 1 cut(s) 992
MhlI GDGCHC 4 cut(s) 173, 314, 455, 690
MlyI GAGTC 1 cut(s) 301
MmeI TCCRAC 1 cut(s) 506
MroXI GAANNNNTTC 2 cut(s) 186, 396
MslI CAYNNNNRTG 1 cut(s) 1206
MspA1I CMGCKG 1 cut(s) 386
MspCI CTTAAG 2 cut(s) 226, 461
MspR9I CCNGG 3 cut(s) 6, 925, 1310
MunI CAATTG 2 cut(s) 356, 408
Mva1269I GAATGC 1 cut(s) 383
MvaI CCWGG 3 cut(s) 6, 925, 1310
MwoI GCNNNNNNNGC 5 cut(s) 694, 863, 887, 1289, 1391
NdeII GATC 3 cut(s) 267, 298, 992
NlaIII CATG 4 cut(s) 1138, 1151, 1211, 1418
NlaIV GGNNCC 4 cut(s) 54, 204, 1183, 1436
NmeAIII GCCGAG 1 cut(s) 331
NspI RCATGY 1 cut(s) 1211
NspV TTCGAA 1 cut(s) 1030
PaeR7I CTCGAG 1 cut(s) 116
PaqCI CACCTGC 1 cut(s) 126
PceI AGGCCT 2 cut(s) 1223, 1292
PcsI WCGNNNNNNNCGW 1 cut(s) 303
PctI GAATGC 1 cut(s) 383
PdmI GAANNNNTTC 2 cut(s) 186, 396
PfeI GAWTC 2 cut(s) 59, 798
PkrI GCNGC 3 cut(s) 134, 669, 722
PleI GAGTC 1 cut(s) 300
PmaCI CACGTG 1 cut(s) 1204
PmlI CACGTG 1 cut(s) 1204
PpsI GAGTC 1 cut(s) 300
Ppu21I YACGTR 1 cut(s) 1204
Psp124BI GAGCTC 1 cut(s) 690
Psp6I CCWGG 3 cut(s) 4, 923, 1308
PspCI CACGTG 1 cut(s) 1204
PspGI CCWGG 3 cut(s) 4, 923, 1308
PspN4I GGNNCC 4 cut(s) 54, 204, 1183, 1436
PspPI GGNCC 2 cut(s) 1181, 1435
PsuI RGATCY 1 cut(s) 992
PvuII CAGCTG 1 cut(s) 386
RsaI GTAC 1 cut(s) 1169
RsaNI GTAC 1 cut(s) 1168
RseI CAYNNNNRTG 1 cut(s) 1206
SacI GAGCTC 1 cut(s) 690
SatI GCNGC 3 cut(s) 133, 668, 721
Sau3AI GATC 3 cut(s) 267, 298, 992
Sau96I GGNCC 2 cut(s) 1181, 1435
SchI GAGTC 1 cut(s) 301
ScrFI CCNGG 3 cut(s) 6, 925, 1310
SduI GDGCHC 4 cut(s) 173, 314, 455, 690
SfaNI GCATC 2 cut(s) 627, 1381
Sfr274I CTCGAG 1 cut(s) 116
SfuI TTCGAA 1 cut(s) 1030
SinI GGWCC 1 cut(s) 1435
SlaI CTCGAG 1 cut(s) 116
SmiMI CAYNNNNRTG 1 cut(s) 1206
SmlI CTYRAG 4 cut(s) 116, 226, 287, 461
SmoI CTYRAG 4 cut(s) 116, 226, 287, 461
SseBI AGGCCT 2 cut(s) 1223, 1292
SsiI CCGC 3 cut(s) 594, 667, 1385
SspI AATATT 1 cut(s) 82
SspMI CTAG 2 cut(s) 315, 578
SstI GAGCTC 1 cut(s) 690
StuI AGGCCT 2 cut(s) 1223, 1292
StyD4I CCNGG 3 cut(s) 4, 923, 1308
TaaI ACNGT 2 cut(s) 886, 1155
TaiI ACGT 2 cut(s) 508, 1206
TaqI TCGA 9 cut(s) 117, 162, 266, 297, 390, 648, 1008, 1030, 1429
TatI WGTACW 1 cut(s) 1167
TauI GCSGC 1 cut(s) 670
TfiI GAWTC 2 cut(s) 59, 798
TscAI CASTG 2 cut(s) 213, 699
TseI GCWGC 2 cut(s) 132, 720
TspDTI ATGAA 4 cut(s) 867, 1111, 1123, 1164
TspGWI ACGGA 1 cut(s) 766
TspRI CASTG 2 cut(s) 213, 699
Vha464I CTTAAG 2 cut(s) 226, 461
VneI GTGCAC 1 cut(s) 451
VpaK11BI GGWCC 1 cut(s) 1435
XapI RAATTY 7 cut(s) 25, 326, 512, 960, 1130, 1400, 1406
XbaI TCTAGA 1 cut(s) 314
XceI RCATGY 1 cut(s) 1211
XhoI CTCGAG 1 cut(s) 116
XmiI GTMKAC 1 cut(s) 1002
XmnI GAANNNNTTC 2 cut(s) 186, 396
XspI CTAG 2 cut(s) 315, 578
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.