pycom05g12040

RESISTANCE protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
15535963 .. 15538520
2558 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g12040.4

Sequence Viewer

Length: 2145 bp
ATGGACAAGGTGCTTAAGTGGAGGGATGCTTTGCAGAAAGCTGCCAACCTATCTGGTTATGATTATTCAAACAAAGCCGGGACAGAGGCTGATTCCATTGAGAAACTTGTCCAAGTTATATTGAACAAATTGGATTGCAAAAGCTCAAGTAATTTAAAGGGCCTAGTTGAAATTGAAACCAAAGTTGAGCAAATTGAATCGTTACTATGCCTTGATTCATCGGATGTTTGCATTGTAGGTATTTGGGGCATGGGTGGTATTGGCAAGACCACCCTTGCTGATGTTGTATATCACCGACTCTCTTCCAAGTTTGAAGCTTGCTGTTTTCTTAAAAATGTTAGAGAAAATTCCGAAGGAAAAGACGGAATATATAACTTACGAAATGAACTTCTCCGTGAGATTTTAGATGATAAAAATACAAATATTAAGACTCCATCTATAGGATCAGAGCTTATTAAAGGGAGGCTCCGTCATACAAAGGTACTCATTGTTCTTGACGACGTGAATGATTCAAGGCAATTAGAACTTCTAGTTGGAGATGATCTTGAGTTTGGTGTCGGAAGTAGAATCATTATAACAACTCGAGATAGGAGCTTACTCAATGAAAAGGTGGTTGATGACAAAATTTACGAGGTCAAGGGATTGAAACATGATGGCGCTCTTCAGCTCTTTCATTTGCATGCTCTGAAAAATAAGTCTCCTACGACAGTTTATACAGAGTTTTCAAGAAAGGTGATAGATTATATTCAAGGCATTCCATTGGCTCTTAAAACTTTGGGTTCCTTATTCCATCGCTGCGATACAGAAGAAGACTGGGATGAAGAATTGAACAGATTGAAAAAATTTCCTAGCGAAAAAATTCAGAAAGTGTTGAGACTTAGTTATGATGGATTAGAAGAAAATGAGAAGGAATGCTTTCTTGACATTGCATGCATTCTGAAAGGGGCAGATGTTTGTTATGCAAAAAGAATATTAGATATTCGGGGTTTCTTTGTGAAGGGAATCCAAATTCTCATTGACAAGTCTCTCATATCAATTTCAGAGACGAATTTCTTAGAGATGCATGATTTGCTGCAAGAAATGGGCCGGACAATTGTTCGCGAACAATGCAAGGACGAGCCAGGAAAACGTAATAGGTTGTGGGCTGCTGATGATGTCTATCAAGTGCTGGAGAATGATACGGGAACTTCAACAGTTCAATGCATATCCTTTGACACGTCTAACATTACACGGTTGGAATTATGTCGATCACCCTTCAAGAAGATGTCTAATTTGAGATTGTTGATAATTCATGATACTAGTCTAAGATTCAAGTACGACATTAACACTGGGTTGGGTGCAGCATACTTCTATTTTTGTTTCTTTTGCGAGGCGTGCAACAACAATCTGGACCTTTCTCAAGGTCTTCAGTCTCTTCCCAATTCTCTCAGGTATCTTTACTGGCAGCGATACCCGTTGAAATCTCTTCCATCAAATTTTTCTCCACAAAATCTTGTTGAGCTTCGAATGCCCGGCAGCTTTGTTGGGGCAGAACTTTGGAGTAAAAACCAGAATCTTGGGAACTTAAAAGTGATTGAACTAAGTTTTTGCACGCATCTGATTGAAGTTCCAGATCTCTCTCGCAGTAAAAAAATTGAGCATATAGTGCTTTTTGGGTGTGAAAGATTGGTTCGAATTCCTTCTTATTTTAAAGATCTTGACAAGCTTAGGTGGCTGAATCTGGAAGAGTGCTCAAGTCTAGAATTCTTACACAAGCTTAGGTGTTGTCTTGAAGCAAGTGGCTGCACTTCACTGAAGACAGTTTCAAGTTCAAGAAATTCACTCACACAAGCTTGGGATAAATATGAATGGTTTCGAGGGCGTTTTAACTTTGTTTGTTGCCGGAACTTGGATGAAAATGCAAGGACCAATATAATGGCTGACACACAGTTAAGAATTATGCGAGTGGCAACTGGGCCATTGAAAACTCAGCAACATAAAGAAGAAGAAATTGTCATGGTCTCTCTCTCACCCACGCACGCACTAGCACACACTTTCATATCTCCTTCATGCCATTTTTTCACGTGTTGTATAATTTACTGGATTTCCATGCATCGATGTTACAGGAAATGGCTTCATCTATCCCTACCTGGTGTCGGACTTTAG

Protein Analysis

715

Amino Acids

81.82

Weight (kDa)

7.44

Isoelectric Point (pI)

44.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 575
AccII CGCG 1 cut(s) 1101
AclWI GGATC 1 cut(s) 451
AcuI CTGAAG 3 cut(s) 647, 1391, 1814
AcvI CACGTG 1 cut(s) 2064
AfaI GTAC 2 cut(s) 483, 1316
AfiI CCNNNNNNNGG 3 cut(s) 440, 1888, 2135
AflII CTTAAG 1 cut(s) 14
AflIII ACRYGT 2 cut(s) 1215, 2063
AhlI ACTAGT 1 cut(s) 1298
AjiI CACGTC 2 cut(s) 502, 1218
AjnI CCWGG 2 cut(s) 1120, 2128
AjuI GAANNNNNNNTTGG 2 cut(s) 516, 548
Alw21I GWGCWC 1 cut(s) 1733
Alw26I GTCTC 6 cut(s) 702, 868, 1029, 1037, 1416, 2005
AlwI GGATC 1 cut(s) 451
AlwNI CAGNNNCTG 1 cut(s) 89
Ama87I CYCGRG 1 cut(s) 582
AoxI GGCC 3 cut(s) 160, 1084, 1955
ApeKI GCWGC 8 cut(s) 41, 795, 1072, 1145, 1340, 1444, 1515, 1782
Asp700I GAANNNNTTC 4 cut(s) 858, 915, 1678, 1851
AspLEI GCGC 1 cut(s) 659
AspS9I GGNCC 5 cut(s) 160, 1084, 1390, 1905, 1955
AsuC2I CCSGG 2 cut(s) 79, 1512
AsuHPI GGTGA 4 cut(s) 284, 745, 1242, 2001
AsuII TTCGAA 2 cut(s) 1504, 1672
AvaI CYCGRG 1 cut(s) 582
AvaII GGWCC 2 cut(s) 1390, 1905
BbrPI CACGTG 1 cut(s) 2064
BbsI GAAGAC 3 cut(s) 816, 1397, 1802
Bbv12I GWGCWC 1 cut(s) 1733
BbvI GCAGC 8 cut(s) 28, 782, 1059, 1132, 1352, 1456, 1527, 1769
BccI CCATC 5 cut(s) 442, 647, 798, 881, 1477
BciT130I CCWGG 2 cut(s) 1122, 2130
BcnI CCSGG 2 cut(s) 79, 1512
BcoDI GTCTC 6 cut(s) 702, 868, 1029, 1037, 1416, 2005
BcuI ACTAGT 1 cut(s) 1298
BfaI CTAG 6 cut(s) 164, 530, 849, 1299, 1739, 2024
BfmI CTRYAG 1 cut(s) 438
BfoI RGCGCY 1 cut(s) 660
BfrI CTTAAG 1 cut(s) 14
BglII AGATCT 2 cut(s) 1612, 1693
BisI GCNGC 8 cut(s) 42, 796, 1073, 1146, 1341, 1445, 1516, 1783
BlsI GCNGC 8 cut(s) 43, 797, 1074, 1147, 1342, 1446, 1517, 1784
Bme1390I CCNGG 4 cut(s) 79, 1122, 1512, 2130
Bme18I GGWCC 2 cut(s) 1390, 1905
BmeT110I CYCGRG 1 cut(s) 582
BmgBI CACGTC 2 cut(s) 502, 1218
BmgT120I GGNCC 5 cut(s) 160, 1084, 1390, 1905, 1955
BmiI GGNNCC 2 cut(s) 467, 781
BmrFI CCNGG 4 cut(s) 79, 1122, 1512, 2130
BmrI ACTGGG 3 cut(s) 823, 1338, 1962
BmsI GCATC 4 cut(s) 16, 1050, 1603, 2101
BmuI ACTGGG 3 cut(s) 823, 1338, 1962
BpiI GAAGAC 3 cut(s) 816, 1397, 1802
BpmI CTGGAG 1 cut(s) 1190
Bpu10I CCTNAGC 2 cut(s) 1706, 1757
Bpu14I TTCGAA 2 cut(s) 1504, 1672
BpuEI CTTGAG 4 cut(s) 130, 566, 1383, 1717
BpuMI CCSGG 2 cut(s) 79, 1512
Bsa29I ATCGAT 1 cut(s) 2095
BsaAI YACGTR 1 cut(s) 2064
BsaBI GATNNNNATC 1 cut(s) 1158
BsaI GGTCTC 1 cut(s) 2005
BsaXI ACNNNNNCTCC 2 cut(s) 454, 484
Bsc4I CCNNNNNNNGG 3 cut(s) 440, 1888, 2135
Bse1I ACTGG 5 cut(s) 818, 1333, 1445, 1957, 2084
Bse3DI GCAATG 1 cut(s) 924
Bse8I GATNNNNATC 1 cut(s) 1158
BseBI CCWGG 2 cut(s) 1122, 2130
BseCI ATCGAT 1 cut(s) 2095
BseGI GGATG 4 cut(s) 31, 229, 823, 1897
BseJI GATNNNNATC 1 cut(s) 1158
BseLI CCNNNNNNNGG 3 cut(s) 440, 1888, 2135
BseMI GCAATG 1 cut(s) 924
BseMII CTCAG 2 cut(s) 1441, 1982
BseNI ACTGG 5 cut(s) 818, 1333, 1445, 1957, 2084
BseXI GCAGC 8 cut(s) 28, 782, 1059, 1132, 1352, 1456, 1527, 1769
BsgI GTGCAG 2 cut(s) 1359, 1768
Bsh1236I CGCG 1 cut(s) 1101
BshFI GGCC 3 cut(s) 162, 1086, 1957
BshVI ATCGAT 1 cut(s) 2095
BsiHKAI GWGCWC 1 cut(s) 1733
BsiHKCI CYCGRG 1 cut(s) 582
BsiSI CCGG 4 cut(s) 78, 1087, 1512, 1882
BslFI GGGAC 1 cut(s) 94
BslI CCNNNNNNNGG 3 cut(s) 440, 1888, 2135
BsmAI GTCTC 6 cut(s) 702, 868, 1029, 1037, 1416, 2005
BsmBI CGTCTC 1 cut(s) 1037
BsmFI GGGAC 1 cut(s) 94
BsmI GAATGC 4 cut(s) 753, 917, 933, 1512
BsnI GGCC 3 cut(s) 162, 1086, 1957
Bso31I GGTCTC 1 cut(s) 2005
BsoBI CYCGRG 1 cut(s) 582
Bsp119I TTCGAA 2 cut(s) 1504, 1672
Bsp1286I GDGCHC 1 cut(s) 1733
Bsp143I GATC 5 cut(s) 443, 541, 1247, 1612, 1693
Bsp68I TCGCGA 1 cut(s) 1101
BspANI GGCC 3 cut(s) 162, 1086, 1957
BspCNI CTCAG 2 cut(s) 1440, 1981
BspDI ATCGAT 1 cut(s) 2095
BspFNI CGCG 1 cut(s) 1101
BspHI TCATGA 1 cut(s) 1291
BspLI GGNNCC 2 cut(s) 467, 781
BspPI GGATC 1 cut(s) 451
BspQI GCTCTTC 1 cut(s) 666
BspT104I TTCGAA 2 cut(s) 1504, 1672
BspTI CTTAAG 1 cut(s) 14
BspTNI GGTCTC 1 cut(s) 2005
BsrDI GCAATG 1 cut(s) 924
BsrI ACTGG 5 cut(s) 818, 1333, 1445, 1957, 2084
BssMI GATC 5 cut(s) 443, 541, 1247, 1612, 1693
Bst2UI CCWGG 2 cut(s) 1122, 2130
Bst4CI ACNGT 5 cut(s) 709, 1195, 1233, 1801, 1929
Bst6I CTCTTC 5 cut(s) 307, 666, 1419, 1470, 1719
BstAFI CTTAAG 1 cut(s) 14
BstAPI GCANNNNNTGC 2 cut(s) 1069, 1645
BstBAI YACGTR 1 cut(s) 2064
BstBI TTCGAA 2 cut(s) 1504, 1672
BstC8I GCNNGC 6 cut(s) 319, 681, 931, 1375, 1592, 2019
BstDEI CTNAG 8 cut(s) 878, 1054, 1304, 1427, 1580, 1706, 1757, 1968
BstF5I GGATG 4 cut(s) 31, 229, 823, 1897
BstFNI CGCG 1 cut(s) 1101
BstH2I RGCGCY 1 cut(s) 660
BstHHI GCGC 1 cut(s) 659
BstKTI GATC 5 cut(s) 446, 544, 1250, 1615, 1696
BstMAI GTCTC 6 cut(s) 702, 868, 1029, 1037, 1416, 2005
BstMBI GATC 5 cut(s) 443, 541, 1247, 1612, 1693
BstMWI GCNNNNNNNGC 6 cut(s) 1069, 1107, 1374, 1507, 1645, 1711
BstNI CCWGG 2 cut(s) 1122, 2130
BstNSI RCATGY 2 cut(s) 683, 933
BstSCI CCNGG 4 cut(s) 77, 1120, 1510, 2128
BstSFI CTRYAG 1 cut(s) 438
BstUI CGCG 1 cut(s) 1101
BstV1I GCAGC 8 cut(s) 28, 782, 1059, 1132, 1352, 1456, 1527, 1769
BstV2I GAAGAC 3 cut(s) 816, 1397, 1802
BstX2I RGATCY 2 cut(s) 1612, 1693
BstXI CCANNNNNNTGG 2 cut(s) 1556, 1915
BstYI RGATCY 2 cut(s) 1612, 1693
Bsu15I ATCGAT 1 cut(s) 2095
BsuRI GGCC 3 cut(s) 162, 1086, 1957
BsuTUI ATCGAT 1 cut(s) 2095
BtgZI GCGATG 1 cut(s) 776
BtrI CACGTC 2 cut(s) 502, 1218
BtsCI GGATG 4 cut(s) 31, 229, 823, 1897
BtsIMutI CAGTG 2 cut(s) 1326, 1790
BtuMI TCGCGA 1 cut(s) 1101
Cac8I GCNNGC 6 cut(s) 319, 681, 931, 1375, 1592, 2019
CaiI CAGNNNCTG 1 cut(s) 89
CciI TCATGA 1 cut(s) 1291
CfoI GCGC 1 cut(s) 659
Cfr13I GGNCC 5 cut(s) 160, 1084, 1390, 1905, 1955
ClaI ATCGAT 1 cut(s) 2095
CsiI ACCWGGT 1 cut(s) 2128
Csp6I GTAC 2 cut(s) 482, 1315
CviAII CATG 9 cut(s) 250, 650, 680, 930, 1064, 1292, 1996, 2049, 2089
CviQI GTAC 2 cut(s) 482, 1315
DdeI CTNAG 8 cut(s) 878, 1054, 1304, 1427, 1580, 1706, 1757, 1968
DpnI GATC 5 cut(s) 445, 543, 1249, 1614, 1695
DpnII GATC 5 cut(s) 443, 541, 1247, 1612, 1693
DraI TTTAAA 2 cut(s) 156, 1690
Eam1104I CTCTTC 5 cut(s) 307, 666, 1419, 1470, 1719
EarI CTCTTC 5 cut(s) 307, 666, 1419, 1470, 1719
Eco31I GGTCTC 1 cut(s) 2005
Eco47I GGWCC 2 cut(s) 1390, 1905
Eco57I CTGAAG 3 cut(s) 647, 1391, 1814
Eco72I CACGTG 1 cut(s) 2064
Eco88I CYCGRG 1 cut(s) 582
EcoO109I RGGNCCY 1 cut(s) 160
EcoRI GAATTC 2 cut(s) 1674, 1742
EcoRII CCWGG 2 cut(s) 1120, 2128
EcoT22I ATGCAT 4 cut(s) 935, 1065, 1205, 2094
Esp3I CGTCTC 1 cut(s) 1037
FaeI CATG 9 cut(s) 253, 653, 683, 933, 1067, 1295, 1999, 2052, 2092
FalI AAGNNNNNCTT 2 cut(s) 899, 931
FaqI GGGAC 1 cut(s) 94
FatI CATG 9 cut(s) 249, 649, 679, 929, 1063, 1291, 1995, 2048, 2088
Fnu4HI GCNGC 8 cut(s) 42, 796, 1073, 1146, 1341, 1445, 1516, 1783
FokI GGATG 4 cut(s) 38, 236, 830, 1904
Fsp4HI GCNGC 8 cut(s) 42, 796, 1073, 1146, 1341, 1445, 1516, 1783
FspBI CTAG 6 cut(s) 164, 530, 849, 1299, 1739, 2024
GlaI GCGC 1 cut(s) 658
GluI GCNGC 8 cut(s) 42, 796, 1073, 1146, 1341, 1445, 1516, 1783
GsuI CTGGAG 1 cut(s) 1190
HaeII RGCGCY 1 cut(s) 660
HaeIII GGCC 3 cut(s) 162, 1086, 1957
HapII CCGG 4 cut(s) 78, 1087, 1512, 1882
HhaI GCGC 1 cut(s) 659
Hin1II CATG 9 cut(s) 253, 653, 683, 933, 1067, 1295, 1999, 2052, 2092
Hin6I GCGC 1 cut(s) 657
HinP1I GCGC 1 cut(s) 657
HindIII AAGCTT 4 cut(s) 315, 1703, 1754, 1830
HpaII CCGG 4 cut(s) 78, 1087, 1512, 1882
HphI GGTGA 4 cut(s) 284, 745, 1242, 2001
Hpy99I CGWCG 1 cut(s) 503
HpyAV CCTTC 6 cut(s) 347, 901, 991, 1264, 1689, 2055
HpyCH4III ACNGT 5 cut(s) 709, 1195, 1233, 1801, 1929
HpyCH4IV ACGT 4 cut(s) 501, 1129, 1217, 2063
HpyF10VI GCNNNNNNNGC 6 cut(s) 1069, 1107, 1374, 1507, 1645, 1711
HpyF3I CTNAG 8 cut(s) 878, 1054, 1304, 1427, 1580, 1706, 1757, 1968
HpySE526I ACGT 4 cut(s) 501, 1129, 1217, 2063
Hsp92II CATG 9 cut(s) 253, 653, 683, 933, 1067, 1295, 1999, 2052, 2092
HspAI GCGC 1 cut(s) 657
Kzo9I GATC 5 cut(s) 443, 541, 1247, 1612, 1693
LguI GCTCTTC 1 cut(s) 666
LmnI GCTCC 2 cut(s) 471, 591
Lsp1109I GCAGC 8 cut(s) 28, 782, 1059, 1132, 1352, 1456, 1527, 1769
LweI GCATC 4 cut(s) 16, 1050, 1603, 2101
MabI ACCWGGT 1 cut(s) 2128
MaeI CTAG 6 cut(s) 164, 530, 849, 1299, 1739, 2024
MaeII ACGT 4 cut(s) 501, 1129, 1217, 2063
MaeIII GTNAC 2 cut(s) 201, 2099
MalI GATC 5 cut(s) 445, 543, 1249, 1614, 1695
MboI GATC 5 cut(s) 443, 541, 1247, 1612, 1693
MfeI CAATTG 1 cut(s) 1092
MflI RGATCY 2 cut(s) 1612, 1693
MhlI GDGCHC 1 cut(s) 1733
MlyI GAGTC 2 cut(s) 291, 424
MmeI TCCRAC 4 cut(s) 514, 538, 1215, 2116
MnlI CCTC 6 cut(s) 15, 79, 456, 625, 1363, 1850
Mph1103I ATGCAT 4 cut(s) 935, 1065, 1205, 2094
MroXI GAANNNNTTC 4 cut(s) 858, 915, 1678, 1851
MslI CAYNNNNRTG 1 cut(s) 678
MspCI CTTAAG 1 cut(s) 14
MspI CCGG 4 cut(s) 78, 1087, 1512, 1882
MspR9I CCNGG 4 cut(s) 79, 1122, 1512, 2130
MunI CAATTG 1 cut(s) 1092
Mva1269I GAATGC 4 cut(s) 753, 917, 933, 1512
MvaI CCWGG 2 cut(s) 1122, 2130
MvnI CGCG 1 cut(s) 1101
MwoI GCNNNNNNNGC 6 cut(s) 1069, 1107, 1374, 1507, 1645, 1711
NciI CCSGG 2 cut(s) 79, 1512
NdeII GATC 5 cut(s) 443, 541, 1247, 1612, 1693
NlaIII CATG 9 cut(s) 253, 653, 683, 933, 1067, 1295, 1999, 2052, 2092
NlaIV GGNNCC 2 cut(s) 467, 781
NruI TCGCGA 1 cut(s) 1101
NsiI ATGCAT 4 cut(s) 935, 1065, 1205, 2094
NspI RCATGY 2 cut(s) 683, 933
NspV TTCGAA 2 cut(s) 1504, 1672
PaeI GCATGC 2 cut(s) 683, 933
PaeR7I CTCGAG 1 cut(s) 582
PagI TCATGA 1 cut(s) 1291
PciSI GCTCTTC 1 cut(s) 666
PctI GAATGC 4 cut(s) 753, 917, 933, 1512
PdmI GAANNNNTTC 4 cut(s) 858, 915, 1678, 1851
PfeI GAWTC 9 cut(s) 92, 197, 215, 509, 567, 1002, 1308, 1552, 1717
PkrI GCNGC 8 cut(s) 43, 797, 1074, 1147, 1342, 1446, 1517, 1784
PleI GAGTC 2 cut(s) 291, 424
PmaCI CACGTG 1 cut(s) 2064
PmlI CACGTG 1 cut(s) 2064
PpsI GAGTC 2 cut(s) 291, 424
Ppu21I YACGTR 1 cut(s) 2064
PsiI TTATAA 1 cut(s) 575
Psp6I CCWGG 2 cut(s) 1120, 2128
PspCI CACGTG 1 cut(s) 2064
PspGI CCWGG 2 cut(s) 1120, 2128
PspN4I GGNNCC 2 cut(s) 467, 781
PspPI GGNCC 5 cut(s) 160, 1084, 1390, 1905, 1955
PsrI GAACNNNNNNTAC 2 cut(s) 474, 506
PstNI CAGNNNCTG 1 cut(s) 89
PsuI RGATCY 2 cut(s) 1612, 1693
RruI TCGCGA 1 cut(s) 1101
RsaI GTAC 2 cut(s) 483, 1316
RsaNI GTAC 2 cut(s) 482, 1315
RseI CAYNNNNRTG 1 cut(s) 678
SapI GCTCTTC 1 cut(s) 666
SatI GCNGC 8 cut(s) 42, 796, 1073, 1146, 1341, 1445, 1516, 1783
Sau3AI GATC 5 cut(s) 443, 541, 1247, 1612, 1693
Sau96I GGNCC 5 cut(s) 160, 1084, 1390, 1905, 1955
SchI GAGTC 2 cut(s) 291, 424
ScrFI CCNGG 4 cut(s) 79, 1122, 1512, 2130
SduI GDGCHC 1 cut(s) 1733
SexAI ACCWGGT 1 cut(s) 2128
SfaNI GCATC 4 cut(s) 16, 1050, 1603, 2101
SfcI CTRYAG 1 cut(s) 438
Sfr274I CTCGAG 1 cut(s) 582
SfuI TTCGAA 2 cut(s) 1504, 1672
SinI GGWCC 2 cut(s) 1390, 1905
SlaI CTCGAG 1 cut(s) 582
SmiMI CAYNNNNRTG 1 cut(s) 678
SmlI CTYRAG 6 cut(s) 14, 145, 545, 582, 1398, 1732
SmoI CTYRAG 6 cut(s) 14, 145, 545, 582, 1398, 1732
SpeI ACTAGT 1 cut(s) 1298
SphI GCATGC 2 cut(s) 683, 933
SspI AATATT 2 cut(s) 424, 972
SspMI CTAG 6 cut(s) 164, 530, 849, 1299, 1739, 2024
StyD4I CCNGG 4 cut(s) 77, 1120, 1510, 2128
TaaI ACNGT 5 cut(s) 709, 1195, 1233, 1801, 1929
TaiI ACGT 4 cut(s) 504, 1132, 1220, 2066
TaqI TCGA 6 cut(s) 583, 1246, 1504, 1672, 1855, 2095
TfiI GAWTC 9 cut(s) 92, 197, 215, 509, 567, 1002, 1308, 1552, 1717
TscAI CASTG 2 cut(s) 1333, 1797
TseI GCWGC 8 cut(s) 41, 795, 1072, 1145, 1340, 1444, 1515, 1782
TspGWI ACGGA 3 cut(s) 378, 383, 458
TspRI CASTG 2 cut(s) 1333, 1797
Vha464I CTTAAG 1 cut(s) 14
VpaK11BI GGWCC 2 cut(s) 1390, 1905
XbaI TCTAGA 1 cut(s) 1738
XceI RCATGY 2 cut(s) 683, 933
XhoI CTCGAG 1 cut(s) 582
XmnI GAANNNNTTC 4 cut(s) 858, 915, 1678, 1851
XspI CTAG 6 cut(s) 164, 530, 849, 1299, 1739, 2024
Zsp2I ATGCAT 4 cut(s) 935, 1065, 1205, 2094
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.