pycom05g09430

Toll - interleukin 1 - resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
12601591 .. 12603704
2114 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g09430.2

Sequence Viewer

Length: 1674 bp
ATGGGTGGTATTGGCAAGACCACCCTTGCTAGAACTGTATTTGACAAATTCTCTTCTAAATTCGAAGCTTCTTGTTTTTTTGGAAATGTTAGGGAGAACTCAGAACAAACAAATGGACTAGATCACTTGGAAAAGATACTTCTTAAAGAGATATTAAAGGAAGAAGGTCCATCCATAGGATCAACTTTTGTTCGAGATAGGCTCAGCCGTATAAAGGTCCTCATTGTTCTTGATGATGTGAGTGATTCAATGCAAATGGAACATTTAGCTGGCGAGCGTCTTCGATATGGCACTGGAAGTAGAATCATTATCACAAGTAGAGATAGGGCCACACTAAGGCAAACTGTTGAAGAGGATAAGATCTATGAGGTTAAGGGATTAAAAGAGGATGACGCTCTTCAGCTTTTCTGTTCGCGTGCTTGCAAGAATAACAATACTCCTAGAACTGATTATATGCAGATGGCAAAAAAGGCGGTGGATTGTGCCGGGGGCAATCCTTTAGCTCTTAAGCTTCTAAGGTCCTCATTCTTAAATTGCAAGGGAAAAGAAGACTGGGAAGGTGAATTGGACAAATTGAAAGCATTTCCCAACGAAAAGCTCCATAAACTGTTGAGACTAAGTTATGACAGATTGGGAAGAAATGAAAAGGAGATATTTTTGGATATAGCATGTTTTCATAAAGGGAAGAGAGTGGATGAGGTAGAAAAAATGTTAGCTATCCGTGGACGGTTTGCGGCAATTGGAATTAGAGTTCTCGTTGATATGTCTCTCATATCAGTTTGTCTAGGTTATGTTTATGAAACCATAGAGATGCACGATTTGATACAAGAAATGGGAAGGGCAATAGTTCAAGAACAATGTATTGAAGATCCTAGTAAACGGAAAAGGTTGTTCACTGATGAGGATGTCAATTGTGTACTGGAGAGTAACACAGAAACTCCAATTGTTGAAGCCATACGGGTTAATTGGTTTAAGATTAAAGAGCAGCGATCGAAACGTGTAGACTTCAAAAAGATGCGTAACCTAATAATGCTAATTGTGGATGAGTTTGGTAATTACTGGGATTTCACCATTTCTCTAGACCTTCCCGATTCTATTCGCTATCTTTACTGGCCTTATTATTCACTGGAACCTTTGCCTTCAAATTTTTCTCCCGAAAATCTAGTTGAGCTTCATATGCCATTTAGCAAAGTTAAGAAGCTTTGGAAAGAAGACCGGATACTTGTGAACTTAGAAGTGATCGATCTGGCATGCTCTGAAAATCTAACTCAAGTTCCAAATCTCTCTGGAAGTCTAAAAATTGTGAACATAAATCTCCGTGGCTGTACAAGGGTGGTTGAAATTCCTTGGTATATTCAACATCTTGACAAGCTTACTCATCTTGATCTTAGAGGCTGCACCAGTGTCAAGTGTCTTCCAGAGATGCCAGGAAATATTCAATACTTAGATTTATCTTACAGTGGTATAAAGGAGTTGCCCGAATCAGTTTGGTCTAACGAAAATATTTCTTACTTGAATATTAGCTATTGCAAAGACCTTGAGAAACTTCCAAGCAACAAGTGTAAGGTGAAACTCTCTAATTGGTTTAGTCTATGGGGCTGCACATCTCTTCGCCAGTTTTCTGAGCTTCCCAGGGACATGAGATACTCAATGACACAATTGATTATAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

558

Amino Acids

64.36

Weight (kDa)

7.78

Isoelectric Point (pI)

39.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1667
AccI GTMKAC 1 cut(s) 1002
AccII CGCG 1 cut(s) 415
AciI CCGC 2 cut(s) 473, 734
AclWI GGATC 2 cut(s) 187, 863
AcsI RAATTY 4 cut(s) 47, 59, 1144, 1341
AcuI CTGAAG 1 cut(s) 383
AfaI GTAC 2 cut(s) 918, 1327
AfiI CCNNNNNNNGG 3 cut(s) 176, 214, 336
AflII CTTAAG 1 cut(s) 506
AflIII ACRYGT 1 cut(s) 997
AjnI CCWGG 2 cut(s) 1426, 1631
AloI GAACNNNNNNTCC 2 cut(s) 735, 767
Alw26I GTCTC 2 cut(s) 607, 771
AlwI GGATC 2 cut(s) 187, 863
AoxI GGCC 2 cut(s) 327, 1112
ApeKI GCWGC 3 cut(s) 985, 1395, 1599
ApoI RAATTY 4 cut(s) 47, 59, 1144, 1341
AspS9I GGNCC 4 cut(s) 167, 217, 327, 519
AsuC2I CCSGG 1 cut(s) 487
AsuHPI GGTGA 3 cut(s) 572, 1060, 1579
AsuII TTCGAA 1 cut(s) 63
AvaII GGWCC 3 cut(s) 167, 217, 519
BarI GAAGNNNNNNTAC 2 cut(s) 1203, 1235
BbsI GAAGAC 4 cut(s) 272, 555, 1218, 1406
BbvI GCAGC 3 cut(s) 997, 1382, 1586
BccI CCATC 2 cut(s) 178, 454
BceAI ACGGC 1 cut(s) 192
BciT130I CCWGG 2 cut(s) 1428, 1633
BciVI GTATCC 1 cut(s) 1212
BcnI CCSGG 1 cut(s) 487
BcoDI GTCTC 2 cut(s) 607, 771
BfaI CTAG 7 cut(s) 30, 119, 441, 785, 873, 1079, 1163
BfrI CTTAAG 1 cut(s) 506
BfuI GTATCC 1 cut(s) 1212
BglII AGATCT 1 cut(s) 360
BisI GCNGC 4 cut(s) 735, 986, 1396, 1600
BlpI GCTNAGC 1 cut(s) 203
BlsI GCNGC 4 cut(s) 736, 987, 1397, 1601
Bme1390I CCNGG 3 cut(s) 487, 1428, 1633
Bme18I GGWCC 3 cut(s) 167, 217, 519
BmgT120I GGNCC 4 cut(s) 167, 217, 327, 519
BmiI GGNNCC 1 cut(s) 1131
BmrFI CCNGG 3 cut(s) 487, 1428, 1633
BmrI ACTGGG 2 cut(s) 562, 1069
BmsI GCATC 3 cut(s) 801, 1005, 1413
BmuI ACTGGG 2 cut(s) 562, 1069
BpiI GAAGAC 4 cut(s) 272, 555, 1218, 1406
BplI GAGNNNNNCTC 2 cut(s) 186, 218
BpmI CTGGAG 1 cut(s) 941
Bpu1102I GCTNAGC 1 cut(s) 203
Bpu14I TTCGAA 1 cut(s) 63
BpuEI CTTGAG 2 cut(s) 1254, 1559
BpuMI CCSGG 1 cut(s) 487
Bsa29I ATCGAT 1 cut(s) 1242
BsaJI CCNNGG 6 cut(s) 486, 721, 1318, 1346, 1631, 1632
BsaWI WCCGGW 1 cut(s) 1215
BsaXI ACNNNNNCTCC 2 cut(s) 922, 952
Bsc4I CCNNNNNNNGG 3 cut(s) 176, 214, 336
Bse1I ACTGG 8 cut(s) 298, 557, 924, 1064, 1115, 1131, 1401, 1615
BseBI CCWGG 2 cut(s) 1428, 1633
BseCI ATCGAT 1 cut(s) 1242
BseDI CCNNGG 6 cut(s) 486, 721, 1318, 1346, 1631, 1632
BseGI GGATG 5 cut(s) 170, 394, 700, 910, 1048
BseLI CCNNNNNNNGG 3 cut(s) 176, 214, 336
BseMII CTCAG 3 cut(s) 114, 217, 1614
BseNI ACTGG 8 cut(s) 298, 557, 924, 1064, 1115, 1131, 1401, 1615
BseXI GCAGC 3 cut(s) 997, 1382, 1586
BsgI GTGCAG 2 cut(s) 1381, 1585
Bsh1236I CGCG 1 cut(s) 415
Bsh1285I CGRYCG 1 cut(s) 992
BshFI GGCC 2 cut(s) 329, 1114
BshVI ATCGAT 1 cut(s) 1242
BsiEI CGRYCG 1 cut(s) 992
BsiSI CCGG 2 cut(s) 486, 1216
BslFI GGGAC 1 cut(s) 1649
BslI CCNNNNNNNGG 3 cut(s) 176, 214, 336
BsmAI GTCTC 2 cut(s) 607, 771
BsmFI GGGAC 1 cut(s) 1649
BsnI GGCC 2 cut(s) 329, 1114
Bsp119I TTCGAA 1 cut(s) 63
Bsp1407I TGTACA 1 cut(s) 1325
Bsp143I GATC 8 cut(s) 121, 179, 360, 868, 989, 1239, 1243, 1384
Bsp1720I GCTNAGC 1 cut(s) 203
BspACI CCGC 2 cut(s) 473, 734
BspANI GGCC 2 cut(s) 329, 1114
BspCNI CTCAG 3 cut(s) 113, 216, 1615
BspDI ATCGAT 1 cut(s) 1242
BspFNI CGCG 1 cut(s) 415
BspLI GGNNCC 1 cut(s) 1131
BspPI GGATC 2 cut(s) 187, 863
BspQI GCTCTTC 1 cut(s) 402
BspT104I TTCGAA 1 cut(s) 63
BspTI CTTAAG 1 cut(s) 506
BsrGI TGTACA 1 cut(s) 1325
BsrI ACTGG 8 cut(s) 298, 557, 924, 1064, 1115, 1131, 1401, 1615
BssECI CCNNGG 6 cut(s) 486, 721, 1318, 1346, 1631, 1632
BssMI GATC 8 cut(s) 121, 179, 360, 868, 989, 1239, 1243, 1384
BssT1I CCWWGG 1 cut(s) 1346
Bst2UI CCWGG 2 cut(s) 1428, 1633
Bst4CI ACNGT 5 cut(s) 37, 346, 609, 729, 1460
Bst6I CTCTTC 5 cut(s) 58, 345, 402, 680, 1614
BstAFI CTTAAG 1 cut(s) 506
BstAUI TGTACA 1 cut(s) 1325
BstBI TTCGAA 1 cut(s) 63
BstC8I GCNNGC 5 cut(s) 271, 275, 417, 421, 1252
BstDEI CTNAG 9 cut(s) 100, 203, 335, 515, 617, 1231, 1388, 1444, 1623
BstDSI CCRYGG 2 cut(s) 721, 1318
BstF5I GGATG 5 cut(s) 170, 394, 700, 910, 1048
BstFNI CGCG 1 cut(s) 415
BstKTI GATC 8 cut(s) 124, 182, 363, 871, 992, 1242, 1246, 1387
BstMAI GTCTC 2 cut(s) 607, 771
BstMBI GATC 8 cut(s) 121, 179, 360, 868, 989, 1239, 1243, 1384
BstMCI CGRYCG 1 cut(s) 992
BstMWI GCNNNNNNNGC 2 cut(s) 470, 1177
BstNI CCWGG 2 cut(s) 1428, 1633
BstNSI RCATGY 2 cut(s) 672, 1254
BstSCI CCNGG 3 cut(s) 485, 1426, 1631
BstUI CGCG 1 cut(s) 415
BstV1I GCAGC 3 cut(s) 997, 1382, 1586
BstV2I GAAGAC 4 cut(s) 272, 555, 1218, 1406
BstX2I RGATCY 2 cut(s) 360, 868
BstYI RGATCY 2 cut(s) 360, 868
Bsu15I ATCGAT 1 cut(s) 1242
BsuI GTATCC 1 cut(s) 1212
BsuRI GGCC 2 cut(s) 329, 1114
BsuTUI ATCGAT 1 cut(s) 1242
BtgI CCRYGG 2 cut(s) 721, 1318
BtsCI GGATG 5 cut(s) 170, 394, 700, 910, 1048
BtsIMutI CAGTG 5 cut(s) 291, 894, 1124, 1408, 1465
Cac8I GCNNGC 5 cut(s) 271, 275, 417, 421, 1252
Cfr13I GGNCC 4 cut(s) 167, 217, 327, 519
ClaI ATCGAT 1 cut(s) 1242
CseI GACGC 2 cut(s) 266, 401
Csp6I GTAC 2 cut(s) 917, 1326
CviAII CATG 3 cut(s) 669, 1251, 1639
CviQI GTAC 2 cut(s) 917, 1326
DdeI CTNAG 9 cut(s) 100, 203, 335, 515, 617, 1231, 1388, 1444, 1623
DpnI GATC 8 cut(s) 123, 181, 362, 870, 991, 1241, 1245, 1386
DpnII GATC 8 cut(s) 121, 179, 360, 868, 989, 1239, 1243, 1384
Eam1104I CTCTTC 5 cut(s) 58, 345, 402, 680, 1614
EarI CTCTTC 5 cut(s) 58, 345, 402, 680, 1614
Eco130I CCWWGG 1 cut(s) 1346
Eco47I GGWCC 3 cut(s) 167, 217, 519
Eco57I CTGAAG 1 cut(s) 383
EcoO109I RGGNCCY 2 cut(s) 217, 519
EcoRII CCWGG 2 cut(s) 1426, 1631
EcoT14I CCWWGG 1 cut(s) 1346
ErhI CCWWGG 1 cut(s) 1346
FaeI CATG 3 cut(s) 672, 1254, 1642
FaqI GGGAC 1 cut(s) 1649
FatI CATG 3 cut(s) 668, 1250, 1638
FauNDI CATATG 1 cut(s) 1176
FblI GTMKAC 1 cut(s) 1002
Fnu4HI GCNGC 4 cut(s) 735, 986, 1396, 1600
FokI GGATG 5 cut(s) 157, 401, 707, 917, 1055
Fsp4HI GCNGC 4 cut(s) 735, 986, 1396, 1600
FspBI CTAG 7 cut(s) 30, 119, 441, 785, 873, 1079, 1163
GluI GCNGC 4 cut(s) 735, 986, 1396, 1600
GsuI CTGGAG 1 cut(s) 941
HaeIII GGCC 2 cut(s) 329, 1114
HapII CCGG 2 cut(s) 486, 1216
HgaI GACGC 2 cut(s) 266, 401
Hin1II CATG 3 cut(s) 672, 1254, 1642
HindIII AAGCTT 4 cut(s) 66, 509, 1199, 1370
HinfI GANTC 4 cut(s) 245, 303, 1091, 1481
HpaII CCGG 2 cut(s) 486, 1216
HphI GGTGA 3 cut(s) 572, 1060, 1579
Hpy166II GTNNAC 7 cut(s) 725, 878, 894, 917, 1003, 1228, 1306
Hpy188I TCNGA 3 cut(s) 103, 1258, 1624
Hpy8I GTNNAC 7 cut(s) 725, 878, 894, 917, 1003, 1228, 1306
HpyAV CCTTC 5 cut(s) 158, 551, 831, 1094, 1149
HpyCH4III ACNGT 5 cut(s) 37, 346, 609, 729, 1460
HpyCH4IV ACGT 1 cut(s) 997
HpyCH4V TGCA 8 cut(s) 253, 423, 457, 537, 814, 1398, 1530, 1602
HpyF10VI GCNNNNNNNGC 2 cut(s) 470, 1177
HpyF3I CTNAG 9 cut(s) 100, 203, 335, 515, 617, 1231, 1388, 1444, 1623
HpySE526I ACGT 1 cut(s) 997
Hsp92II CATG 3 cut(s) 672, 1254, 1642
Kzo9I GATC 8 cut(s) 121, 179, 360, 868, 989, 1239, 1243, 1384
LguI GCTCTTC 1 cut(s) 402
LmnI GCTCC 1 cut(s) 603
Lsp1109I GCAGC 3 cut(s) 997, 1382, 1586
LweI GCATC 3 cut(s) 801, 1005, 1413
MaeI CTAG 7 cut(s) 30, 119, 441, 785, 873, 1079, 1163
MaeII ACGT 1 cut(s) 997
MaeIII GTNAC 2 cut(s) 926, 1019
MalI GATC 8 cut(s) 123, 181, 362, 870, 991, 1241, 1245, 1386
MboI GATC 8 cut(s) 121, 179, 360, 868, 989, 1239, 1243, 1384
MfeI CAATTG 4 cut(s) 738, 910, 942, 1658
MflI RGATCY 2 cut(s) 360, 868
MnlI CCTC 8 cut(s) 230, 346, 361, 379, 532, 691, 895, 1385
MslI CAYNNNNRTG 1 cut(s) 809
MspCI CTTAAG 1 cut(s) 506
MspI CCGG 2 cut(s) 486, 1216
MspR9I CCNGG 3 cut(s) 487, 1428, 1633
MunI CAATTG 4 cut(s) 738, 910, 942, 1658
MvaI CCWGG 2 cut(s) 1428, 1633
MvnI CGCG 1 cut(s) 415
MwoI GCNNNNNNNGC 2 cut(s) 470, 1177
NciI CCSGG 1 cut(s) 487
NdeI CATATG 1 cut(s) 1176
NdeII GATC 8 cut(s) 121, 179, 360, 868, 989, 1239, 1243, 1384
NlaIII CATG 3 cut(s) 672, 1254, 1642
NlaIV GGNNCC 1 cut(s) 1131
NspI RCATGY 2 cut(s) 672, 1254
NspV TTCGAA 1 cut(s) 63
PaeI GCATGC 1 cut(s) 1254
PasI CCCWGGG 1 cut(s) 1632
PciSI GCTCTTC 1 cut(s) 402
PfeI GAWTC 4 cut(s) 245, 303, 1091, 1481
PkrI GCNGC 4 cut(s) 736, 987, 1397, 1601
Ple19I CGATCG 1 cut(s) 992
PpuMI RGGWCCY 2 cut(s) 217, 519
PsiI TTATAA 1 cut(s) 1667
Psp5II RGGWCCY 2 cut(s) 217, 519
Psp6I CCWGG 2 cut(s) 1426, 1631
PspGI CCWGG 2 cut(s) 1426, 1631
PspN4I GGNNCC 1 cut(s) 1131
PspPI GGNCC 4 cut(s) 167, 217, 327, 519
PspPPI RGGWCCY 2 cut(s) 217, 519
PsuI RGATCY 2 cut(s) 360, 868
PvuI CGATCG 1 cut(s) 992
RsaI GTAC 2 cut(s) 918, 1327
RsaNI GTAC 2 cut(s) 917, 1326
RseI CAYNNNNRTG 1 cut(s) 809
SapI GCTCTTC 1 cut(s) 402
SatI GCNGC 4 cut(s) 735, 986, 1396, 1600
Sau3AI GATC 8 cut(s) 121, 179, 360, 868, 989, 1239, 1243, 1384
Sau96I GGNCC 4 cut(s) 167, 217, 327, 519
ScrFI CCNGG 3 cut(s) 487, 1428, 1633
SfaNI GCATC 3 cut(s) 801, 1005, 1413
SfuI TTCGAA 1 cut(s) 63
SinI GGWCC 3 cut(s) 167, 217, 519
SmiMI CAYNNNNRTG 1 cut(s) 809
SmlI CTYRAG 3 cut(s) 506, 1269, 1538
SmoI CTYRAG 3 cut(s) 506, 1269, 1538
SphI GCATGC 1 cut(s) 1254
SsiI CCGC 2 cut(s) 473, 734
SspI AATATT 3 cut(s) 1435, 1504, 1519
SspMI CTAG 7 cut(s) 30, 119, 441, 785, 873, 1079, 1163
StyD4I CCNGG 3 cut(s) 485, 1426, 1631
StyI CCWWGG 1 cut(s) 1346
TaaI ACNGT 5 cut(s) 37, 346, 609, 729, 1460
TaiI ACGT 1 cut(s) 1000
TaqI TCGA 5 cut(s) 63, 193, 283, 992, 1242
TatI WGTACW 2 cut(s) 916, 1325
TauI GCSGC 1 cut(s) 737
TfiI GAWTC 4 cut(s) 245, 303, 1091, 1481
TscAI CASTG 5 cut(s) 298, 901, 1131, 1408, 1465
TseI GCWGC 3 cut(s) 985, 1395, 1599
TspDTI ATGAA 4 cut(s) 657, 665, 813, 1163
TspGWI ACGGA 3 cut(s) 710, 895, 1307
TspRI CASTG 5 cut(s) 298, 901, 1131, 1408, 1465
Vha464I CTTAAG 1 cut(s) 506
VpaK11BI GGWCC 3 cut(s) 167, 217, 519
XapI RAATTY 4 cut(s) 47, 59, 1144, 1341
XbaI TCTAGA 1 cut(s) 1078
XceI RCATGY 2 cut(s) 672, 1254
XmiI GTMKAC 1 cut(s) 1002
XspI CTAG 7 cut(s) 30, 119, 441, 785, 873, 1079, 1163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.