pycom05g14290

Toll - interleukin 1 - resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
17840106 .. 17842942
2837 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g14290.3

Sequence Viewer

Length: 2376 bp
ATGGACATTGCTTCTTCTTCATCATCCGCTGCTGATAACCCCCCACGTCGAGAAAAGTATGATGTGTTTATCAGTTTCAGAGGCGAGGACACCCGCCTTGGTATTACCAGCCATCTACATGCTGCCTTACTTCAGAAGAAAATTGAAACCTACATCGATTACAAACTTCAGAGTGGAGAAGAAATCGGACCTGCCCTTCGACAGGCAATCGAGAAATCCACGATTTCGGTGATCATTTTCTCTCAAAACTATGCTTCTTCCACATGGTGTTTAGATGAACTCGTGCATATACTCGAGTGCAAGGAAAGATATGGCCAGATGGTTATACCCGTATTCTACCACATCAATCCATCTGATGTACGAAAACAGCACGGGAGTTATGCGGCTGCATTTGCTCAACTTGAAAAACGTTTCGACAACAGTATCGACAAGGTGCACAAGTGGAGGGATGCTTTGACGACTGCAGCCAATTTATCTGGGTTTGATTATTCAAACAAATCCGGGACGGAGACGGAGGCAAATCTAATTCAGAAAGTTGTCAATCATATTTTGGCCAAAATGTGTCGCGAATCATCCTGCGATTTAAAGGGTTTTGTTGGAATTGAAAGCCGCATCAAGCAGATTGAATCGCTGTTAGGCATTTGTTTACCGGATCCTTGCATCACTGTAGGTATTTGGGGCATGGGTGGTATTGGCAAGACCACCCTTGCCGAGGCTGTATTTCTCAGACACTCTTTTAAATTCGAAGCTTCTTGTTTTCTTAAGAATGTAAGGGAGAACTCAGAACAAGCAGGTGGACTAGATCACTTGGAAAAAACACTTTTTAAGGAGATATTAAAGGAAGAAGTTTCTTTGCCCGTAAAATCAACTTTTCAAGAAAGGCTCAGTCGTACAAAGGTCCTCATTGTTCTAGATGACATGAGTGATTCATTGCAAATGGATCGTTTAGCTGGCGATCATCTCCGGTATGGCAGTGGAAGTAGAATCATTATCACAAGTAGAGATAGGGGCAAACTTGGGCTAACTGGTGAAGAGGCTAAGATCTACAAGGTTGAGGGATTAAAATCGGATGACGCTCTTCAGCTCTTCTGTTTGCGTGCTTTCAAGAATAACGGTGCTTGTGCTTTCAAGAATAATGGTGCTTGTAGAACAGATTTTAAGGAGTTGGCAAAAAAGGTGGTTGCTTATGCTGGACGCGTTCCTTTAGCTCTTACAGTTTTGGGGTCCTTGTTCTTCAATTGTAAGAGCAAAGAAGAATGGGAAGATGAATTCAACAAATTGAAACGATTTCCCATTGAAGATATCCAGAAAGTGTTGAGAATAAGTTATGATAAATTGGGAGACAATGAGAAGGATATATTTCTGGATATAGCATGTTTTCATAAAGGGAAGTCTGTGGTTGAGGTAAAACGAATGTTAGATGTTCGTGGATTCTTTGCGACATCTGGAATTAGAATTCTCATTGAGATGTCTCTCGTATCAATTGATTCAAAAGGGAGAATGGAAACCATAGAGATGCACGATTTGCTACAAGAAATGGGAAGGAAAATTGTTCAAGAACAAGATATTAAAGATCCCGGTAAACGGAGTAGGTTGTTCAATGATGAGGATGTCCATCGTGTATTGAGAAGTAACGCGGAAACTCCAAATGTTGAAGCCATACAGGTTAATTGGTATAATCTTCAAAAGCGACCATTAAATCGTGCAGACTTCAAAAAGATGTCTGACCTAAGATTGCTAATTGTTGGCTCGGGGTTTTCTCTAGTGCGTACCGATGTCAAATTCAACACTTCTCTGGAGCTTCCCAATTCTCTTCGTTATCTTGAGTGGTGGAGATATCCATTGGAATCTTTGCCGTCAACTTTTTCTGCGGAAAATCTAGTTGAGCTTCATATGCCAAAAGGCAAAGTTAAGAAGCTTTGGAAAGAAGAGCAGATACTTGTCAAGGAGTGGTGTACAGATCTAACTGAAGTCCCAAATCTCTCTGGGAGTCTAAAAATTGTGAAGATAAATCTCAGGGGCTGTCAAAGTTTGGTTGAAATTCCTTCGTGTTTTCAACATTTGGACAAGCTTACTCATCTTGATCTTGGATTCTGCAGCCGTCTCAAGTATCTTCCAGAGATGCCTGGAAATATTCAATACTTAGATTTACAATGCTCTGGTATAAAGGAGTTGCCTGAATCAGTTTGGTCTAACGAAAATATTTCTTACTTGAATATAACTGATTGCAGAGACCTCGAGAAACTTCCAAGCAGCAGGTGTAAGTTGAAAAATCTCAATCTCCATTGGTGCTCTAAATTTGAAAACTTTCCAGAGATTTTGGAGCCAGTGGAACATTTGAAGTCCTTAAGTTTAATTCAAACAGCAGTTACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

792

Amino Acids

90.01

Weight (kDa)

7.94

Isoelectric Point (pI)

48.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 782, 2247
Acc36I ACCTGC 3 cut(s) 199, 782, 2247
AccII CGCG 3 cut(s) 567, 1197, 1637
AciI CCGC 6 cut(s) 27, 94, 383, 610, 1637, 1871
AclI AACGTT 1 cut(s) 409
AclWI GGATC 4 cut(s) 647, 660, 948, 1568
AcoI YGGCCR 2 cut(s) 313, 552
AcsI RAATTY 6 cut(s) 740, 1268, 1455, 1781, 2040, 2297
AcuI CTGAAG 4 cut(s) 116, 152, 1064, 1989
AdeI CACNNNGTG 1 cut(s) 267
AfaI GTAC 4 cut(s) 360, 892, 1771, 1957
AfiI CCNNNNNNNGG 3 cut(s) 202, 712, 1584
AflII CTTAAG 2 cut(s) 761, 2347
AflIII ACRYGT 1 cut(s) 1195
AjiI CACGTC 1 cut(s) 47
AjnI CCWGG 1 cut(s) 2125
AluBI AGCT 8 cut(s) 749, 950, 1084, 1208, 1801, 1888, 1918, 2071
AluI AGCT 8 cut(s) 749, 950, 1084, 1208, 1801, 1888, 1918, 2071
Alw21I GWGCWC 2 cut(s) 438, 2294
Alw26I GTCTC 5 cut(s) 503, 1335, 1476, 2108, 2226
Alw44I GTGCAC 1 cut(s) 434
AlwI GGATC 4 cut(s) 647, 660, 948, 1568
AlwNI CAGNNNCTG 1 cut(s) 2022
Ama87I CYCGRG 3 cut(s) 293, 1750, 2237
AoxI GGCC 2 cut(s) 313, 552
ApaLI GTGCAC 1 cut(s) 434
ApeKI GCWGC 6 cut(s) 29, 122, 386, 464, 2097, 2253
ApoI RAATTY 6 cut(s) 740, 1268, 1455, 1781, 2040, 2297
ArsI GACNNNNNNTTYG 2 cut(s) 180, 212
Asp700I GAANNNNTTC 1 cut(s) 2307
AspS9I GGNCC 3 cut(s) 188, 898, 1224
AsuC2I CCSGG 2 cut(s) 502, 1578
AsuHPI GGTGA 2 cut(s) 241, 1040
AsuII TTCGAA 1 cut(s) 744
AvaI CYCGRG 3 cut(s) 293, 1750, 2237
AvaII GGWCC 3 cut(s) 188, 898, 1224
BaeGI GKGCMC 1 cut(s) 438
BaeI ACNNNNGTAYC 2 cut(s) 406, 439
BalI TGGCCA 2 cut(s) 315, 554
BamHI GGATCC 1 cut(s) 652
BarI GAAGNNNNNNTAC 2 cut(s) 1920, 1952
BauI CACGAG 1 cut(s) 281
Bbv12I GWGCWC 2 cut(s) 438, 2294
BbvI GCAGC 6 cut(s) 16, 109, 373, 476, 2109, 2265
BccI CCATC 4 cut(s) 120, 313, 358, 1623
BceAI ACGGC 2 cut(s) 1840, 2085
BcgI CGANNNNNNTGC 4 cut(s) 923, 957, 2218, 2252
BciT130I CCWGG 1 cut(s) 2127
BclI TGATCA 1 cut(s) 231
BcnI CCSGG 2 cut(s) 502, 1578
BcoDI GTCTC 5 cut(s) 503, 1335, 1476, 2108, 2226
BfaI CTAG 4 cut(s) 800, 911, 1763, 1880
BfmI CTRYAG 3 cut(s) 462, 666, 2095
BfrI CTTAAG 2 cut(s) 761, 2347
BfuAI ACCTGC 3 cut(s) 199, 782, 2247
BglII AGATCT 2 cut(s) 1041, 1960
BisI GCNGC 8 cut(s) 30, 123, 384, 387, 465, 610, 2098, 2254
BlsI GCNGC 8 cut(s) 31, 124, 385, 388, 466, 611, 2099, 2255
Bme1390I CCNGG 3 cut(s) 502, 1578, 2127
Bme18I GGWCC 3 cut(s) 188, 898, 1224
BmeT110I CYCGRG 3 cut(s) 293, 1750, 2237
BmgBI CACGTC 1 cut(s) 47
BmgT120I GGNCC 3 cut(s) 188, 898, 1224
BmiI GGNNCC 3 cut(s) 654, 1225, 2325
BmrFI CCNGG 3 cut(s) 502, 1578, 2127
BmsI GCATC 5 cut(s) 439, 621, 669, 1506, 2112
BpmI CTGGAG 1 cut(s) 1817
Bpu14I TTCGAA 1 cut(s) 744
BpuEI CTTGAG 2 cut(s) 1844, 2090
BpuMI CCSGG 2 cut(s) 502, 1578
Bsa29I ATCGAT 1 cut(s) 156
BsaBI GATNNNNATC 2 cut(s) 1063, 1614
BsaI GGTCTC 1 cut(s) 2226
BsaJI CCNNGG 2 cut(s) 97, 711
BsaWI WCCGGW 2 cut(s) 649, 963
Bsc4I CCNNNNNNNGG 3 cut(s) 202, 712, 1584
Bse1I ACTGG 2 cut(s) 1030, 2327
Bse3DI GCAATG 2 cut(s) 6, 929
Bse8I GATNNNNATC 2 cut(s) 1063, 1614
BseBI CCWGG 1 cut(s) 2127
BseCI ATCGAT 1 cut(s) 156
BseDI CCNNGG 2 cut(s) 97, 711
BseGI GGATG 5 cut(s) 23, 454, 572, 1075, 1615
BseJI GATNNNNATC 2 cut(s) 1063, 1614
BseLI CCNNNNNNNGG 3 cut(s) 202, 712, 1584
BseMI GCAATG 2 cut(s) 6, 929
BseMII CTCAG 4 cut(s) 739, 795, 898, 2029
BseNI ACTGG 2 cut(s) 1030, 2327
BseSI GKGCMC 1 cut(s) 438
BseXI GCAGC 6 cut(s) 16, 109, 373, 476, 2109, 2265
BsgI GTGCAG 1 cut(s) 1725
Bsh1236I CGCG 3 cut(s) 567, 1197, 1637
BshFI GGCC 2 cut(s) 315, 554
BshVI ATCGAT 1 cut(s) 156
BsiHKAI GWGCWC 2 cut(s) 438, 2294
BsiHKCI CYCGRG 3 cut(s) 293, 1750, 2237
BsiSI CCGG 4 cut(s) 501, 650, 964, 1578
BslFI GGGAC 2 cut(s) 517, 1958
BslI CCNNNNNNNGG 3 cut(s) 202, 712, 1584
BsmAI GTCTC 5 cut(s) 503, 1335, 1476, 2108, 2226
BsmBI CGTCTC 2 cut(s) 503, 2108
BsmFI GGGAC 2 cut(s) 517, 1958
BsnI GGCC 2 cut(s) 315, 554
Bso31I GGTCTC 1 cut(s) 2226
BsoBI CYCGRG 3 cut(s) 293, 1750, 2237
Bsp119I TTCGAA 1 cut(s) 744
Bsp1286I GDGCHC 2 cut(s) 438, 2294
Bsp1407I TGTACA 1 cut(s) 1955
Bsp143I GATC 9 cut(s) 231, 652, 802, 940, 955, 1041, 1573, 1960, 2083
Bsp68I TCGCGA 1 cut(s) 567
BspACI CCGC 6 cut(s) 27, 94, 383, 610, 1637, 1871
BspANI GGCC 2 cut(s) 315, 554
BspCNI CTCAG 4 cut(s) 738, 794, 897, 2028
BspDI ATCGAT 1 cut(s) 156
BspFNI CGCG 3 cut(s) 567, 1197, 1637
BspLI GGNNCC 3 cut(s) 654, 1225, 2325
BspMAI CTGCAG 2 cut(s) 466, 2099
BspMI ACCTGC 3 cut(s) 199, 782, 2247
BspPI GGATC 4 cut(s) 647, 660, 948, 1568
BspQI GCTCTTC 3 cut(s) 1083, 1091, 1923
BspT104I TTCGAA 1 cut(s) 744
BspTI CTTAAG 2 cut(s) 761, 2347
BspTNI GGTCTC 1 cut(s) 2226
BsrDI GCAATG 2 cut(s) 6, 929
BsrGI TGTACA 1 cut(s) 1955
BsrI ACTGG 2 cut(s) 1030, 2327
BssECI CCNNGG 2 cut(s) 97, 711
BssMI GATC 9 cut(s) 231, 652, 802, 940, 955, 1041, 1573, 1960, 2083
BssSI CACGAG 1 cut(s) 281
BssT1I CCWWGG 1 cut(s) 97
Bst2BI CACGAG 1 cut(s) 281
Bst2UI CCWGG 1 cut(s) 2127
Bst4CI ACNGT 4 cut(s) 422, 667, 1115, 1216
Bst6I CTCTTC 5 cut(s) 1026, 1083, 1091, 1818, 1923
BstAFI CTTAAG 2 cut(s) 761, 2347
BstAPI GCANNNNNTGC 1 cut(s) 1525
BstAUI TGTACA 1 cut(s) 1955
BstBI TTCGAA 1 cut(s) 744
BstC8I GCNNGC 2 cut(s) 952, 1098
BstDEI CTNAG 7 cut(s) 725, 781, 884, 1038, 1730, 2015, 2143
BstENI CCTNNNNNAGG 2 cut(s) 200, 710
BstF5I GGATG 5 cut(s) 23, 454, 572, 1075, 1615
BstFNI CGCG 3 cut(s) 567, 1197, 1637
BstKTI GATC 9 cut(s) 234, 655, 805, 943, 958, 1044, 1576, 1963, 2086
BstMAI GTCTC 5 cut(s) 503, 1335, 1476, 2108, 2226
BstMBI GATC 9 cut(s) 231, 652, 802, 940, 955, 1041, 1573, 1960, 2083
BstMWI GCNNNNNNNGC 3 cut(s) 392, 1525, 1894
BstNI CCWGG 1 cut(s) 2127
BstNSI RCATGY 2 cut(s) 122, 1377
BstSCI CCNGG 3 cut(s) 500, 1576, 2125
BstSFI CTRYAG 3 cut(s) 462, 666, 2095
BstSLI GKGCMC 1 cut(s) 438
BstUI CGCG 3 cut(s) 567, 1197, 1637
BstV1I GCAGC 6 cut(s) 16, 109, 373, 476, 2109, 2265
BstX2I RGATCY 4 cut(s) 652, 1041, 1573, 1960
BstYI RGATCY 4 cut(s) 652, 1041, 1573, 1960
Bsu15I ATCGAT 1 cut(s) 156
BsuRI GGCC 2 cut(s) 315, 554
BsuTUI ATCGAT 1 cut(s) 156
BtrI CACGTC 1 cut(s) 47
BtsCI GGATG 5 cut(s) 23, 454, 572, 1075, 1615
BtsI GCAGTG 1 cut(s) 979
BtsIMutI CAGTG 3 cut(s) 663, 979, 2334
BtuMI TCGCGA 1 cut(s) 567
BveI ACCTGC 3 cut(s) 199, 782, 2247
Cac8I GCNNGC 2 cut(s) 952, 1098
CaiI CAGNNNCTG 1 cut(s) 2022
Cfr13I GGNCC 3 cut(s) 188, 898, 1224
ClaI ATCGAT 1 cut(s) 156
CseI GACGC 2 cut(s) 1082, 1203
Csp6I GTAC 4 cut(s) 359, 891, 1770, 1956
CspCI CAANNNNNGTGG 2 cut(s) 1158, 1193
CviAII CATG 5 cut(s) 119, 264, 682, 919, 1374
CviQI GTAC 4 cut(s) 359, 891, 1770, 1956
DdeI CTNAG 7 cut(s) 725, 781, 884, 1038, 1730, 2015, 2143
DpnI GATC 9 cut(s) 233, 654, 804, 942, 957, 1043, 1575, 1962, 2085
DpnII GATC 9 cut(s) 231, 652, 802, 940, 955, 1041, 1573, 1960, 2083
DraI TTTAAA 2 cut(s) 585, 739
DraIII CACNNNGTG 1 cut(s) 267
EaeI YGGCCR 2 cut(s) 313, 552
Eam1104I CTCTTC 5 cut(s) 1026, 1083, 1091, 1818, 1923
EarI CTCTTC 5 cut(s) 1026, 1083, 1091, 1818, 1923
Eco130I CCWWGG 1 cut(s) 97
Eco31I GGTCTC 1 cut(s) 2226
Eco32I GATATC 2 cut(s) 1303, 1838
Eco47I GGWCC 3 cut(s) 188, 898, 1224
Eco57I CTGAAG 4 cut(s) 116, 152, 1064, 1989
Eco88I CYCGRG 3 cut(s) 293, 1750, 2237
EcoNI CCTNNNNNAGG 2 cut(s) 200, 710
EcoO109I RGGNCCY 2 cut(s) 898, 1224
EcoRI GAATTC 2 cut(s) 1268, 1455
EcoRII CCWGG 1 cut(s) 2125
EcoRV GATATC 2 cut(s) 1303, 1838
EcoT14I CCWWGG 1 cut(s) 97
ErhI CCWWGG 1 cut(s) 97
Esp3I CGTCTC 2 cut(s) 503, 2108
FaeI CATG 5 cut(s) 122, 267, 685, 922, 1377
FaqI GGGAC 2 cut(s) 517, 1958
FatI CATG 5 cut(s) 118, 263, 681, 918, 1373
FauI CCCGC 1 cut(s) 101
FauNDI CATATG 1 cut(s) 1893
FbaI TGATCA 1 cut(s) 231
Fnu4HI GCNGC 8 cut(s) 30, 123, 384, 387, 465, 610, 2098, 2254
FokI GGATG 5 cut(s) 10, 461, 559, 1082, 1622
Fsp4HI GCNGC 8 cut(s) 30, 123, 384, 387, 465, 610, 2098, 2254
FspBI CTAG 4 cut(s) 800, 911, 1763, 1880
GluI GCNGC 8 cut(s) 30, 123, 384, 387, 465, 610, 2098, 2254
GsuI CTGGAG 1 cut(s) 1817
HaeIII GGCC 2 cut(s) 315, 554
HapII CCGG 4 cut(s) 501, 650, 964, 1578
HgaI GACGC 2 cut(s) 1082, 1203
Hin1II CATG 5 cut(s) 122, 267, 685, 922, 1377
HincII GTYRAC 1 cut(s) 1860
HindII GTYRAC 1 cut(s) 1860
HindIII AAGCTT 3 cut(s) 747, 1916, 2069
HpaII CCGG 4 cut(s) 501, 650, 964, 1578
HphI GGTGA 2 cut(s) 241, 1040
Hpy166II GTNNAC 6 cut(s) 436, 647, 797, 1583, 1860, 1956
Hpy8I GTNNAC 6 cut(s) 436, 647, 797, 1583, 1860, 1956
Hpy99I CGWCG 1 cut(s) 51
HpyAV CCTTC 4 cut(s) 206, 1345, 1536, 2055
HpyCH4III ACNGT 4 cut(s) 422, 667, 1115, 1216
HpyCH4IV ACGT 2 cut(s) 46, 409
HpyF10VI GCNNNNNNNGC 3 cut(s) 392, 1525, 1894
HpyF3I CTNAG 7 cut(s) 725, 781, 884, 1038, 1730, 2015, 2143
HpySE526I ACGT 2 cut(s) 46, 409
Hsp92II CATG 5 cut(s) 122, 267, 685, 922, 1377
Ksp22I TGATCA 1 cut(s) 231
Kzo9I GATC 9 cut(s) 231, 652, 802, 940, 955, 1041, 1573, 1960, 2083
LguI GCTCTTC 3 cut(s) 1083, 1091, 1923
LmnI GCTCC 2 cut(s) 1798, 2323
Lsp1109I GCAGC 6 cut(s) 16, 109, 373, 476, 2109, 2265
LweI GCATC 5 cut(s) 439, 621, 669, 1506, 2112
MaeI CTAG 4 cut(s) 800, 911, 1763, 1880
MaeII ACGT 2 cut(s) 46, 409
MaeIII GTNAC 2 cut(s) 1631, 2368
MalI GATC 9 cut(s) 233, 654, 804, 942, 957, 1043, 1575, 1962, 2085
MboI GATC 9 cut(s) 231, 652, 802, 940, 955, 1041, 1573, 1960, 2083
MfeI CAATTG 2 cut(s) 1237, 1482
MflI RGATCY 4 cut(s) 652, 1041, 1573, 1960
MhlI GDGCHC 2 cut(s) 438, 2294
MlsI TGGCCA 2 cut(s) 315, 554
MluI ACGCGT 1 cut(s) 1195
MluNI TGGCCA 2 cut(s) 315, 554
MlyI GAGTC 1 cut(s) 1999
MmeI TCCRAC 1 cut(s) 577
Mox20I TGGCCA 2 cut(s) 315, 554
MroXI GAANNNNTTC 1 cut(s) 2307
MscI TGGCCA 2 cut(s) 315, 554
MslI CAYNNNNRTG 3 cut(s) 117, 1466, 1514
Msp20I TGGCCA 2 cut(s) 315, 554
MspA1I CMGCKG 1 cut(s) 29
MspCI CTTAAG 2 cut(s) 761, 2347
MspI CCGG 4 cut(s) 501, 650, 964, 1578
MspR9I CCNGG 3 cut(s) 502, 1578, 2127
MunI CAATTG 2 cut(s) 1237, 1482
MvaI CCWGG 1 cut(s) 2127
MvnI CGCG 3 cut(s) 567, 1197, 1637
MwoI GCNNNNNNNGC 3 cut(s) 392, 1525, 1894
NciI CCSGG 2 cut(s) 502, 1578
NdeI CATATG 1 cut(s) 1893
NdeII GATC 9 cut(s) 231, 652, 802, 940, 955, 1041, 1573, 1960, 2083
NlaIII CATG 5 cut(s) 122, 267, 685, 922, 1377
NlaIV GGNNCC 3 cut(s) 654, 1225, 2325
NmeAIII GCCGAG 1 cut(s) 736
NruI TCGCGA 1 cut(s) 567
NspI RCATGY 2 cut(s) 122, 1377
NspV TTCGAA 1 cut(s) 744
PaeR7I CTCGAG 2 cut(s) 293, 2237
PaqCI CACCTGC 2 cut(s) 782, 2247
PciSI GCTCTTC 3 cut(s) 1083, 1091, 1923
PdmI GAANNNNTTC 1 cut(s) 2307
PfeI GAWTC 9 cut(s) 569, 626, 926, 984, 1431, 1487, 1847, 2091, 2180
PfoI TCCNGGA 1 cut(s) 500
PkrI GCNGC 8 cut(s) 31, 124, 385, 388, 466, 611, 2099, 2255
PleI GAGTC 1 cut(s) 1998
PpsI GAGTC 1 cut(s) 1998
PpuMI RGGWCCY 2 cut(s) 898, 1224
Psp1406I AACGTT 1 cut(s) 409
Psp5II RGGWCCY 2 cut(s) 898, 1224
Psp6I CCWGG 1 cut(s) 2125
PspGI CCWGG 1 cut(s) 2125
PspN4I GGNNCC 3 cut(s) 654, 1225, 2325
PspPI GGNCC 3 cut(s) 188, 898, 1224
PspPPI RGGWCCY 2 cut(s) 898, 1224
PspXI VCTCGAGB 1 cut(s) 293
PstI CTGCAG 2 cut(s) 466, 2099
PstNI CAGNNNCTG 1 cut(s) 2022
PsuI RGATCY 4 cut(s) 652, 1041, 1573, 1960
RruI TCGCGA 1 cut(s) 567
RsaI GTAC 4 cut(s) 360, 892, 1771, 1957
RsaNI GTAC 4 cut(s) 359, 891, 1770, 1956
RseI CAYNNNNRTG 3 cut(s) 117, 1466, 1514
SapI GCTCTTC 3 cut(s) 1083, 1091, 1923
SatI GCNGC 8 cut(s) 30, 123, 384, 387, 465, 610, 2098, 2254
Sau3AI GATC 9 cut(s) 231, 652, 802, 940, 955, 1041, 1573, 1960, 2083
Sau96I GGNCC 3 cut(s) 188, 898, 1224
SchI GAGTC 1 cut(s) 1999
ScrFI CCNGG 3 cut(s) 502, 1578, 2127
SduI GDGCHC 2 cut(s) 438, 2294
SfaNI GCATC 5 cut(s) 439, 621, 669, 1506, 2112
SfcI CTRYAG 3 cut(s) 462, 666, 2095
Sfr274I CTCGAG 2 cut(s) 293, 2237
SfuI TTCGAA 1 cut(s) 744
SinI GGWCC 3 cut(s) 188, 898, 1224
SlaI CTCGAG 2 cut(s) 293, 2237
SmiMI CAYNNNNRTG 3 cut(s) 117, 1466, 1514
SmlI CTYRAG 6 cut(s) 293, 761, 1823, 2105, 2237, 2347
SmoI CTYRAG 6 cut(s) 293, 761, 1823, 2105, 2237, 2347
SsiI CCGC 6 cut(s) 27, 94, 383, 610, 1637, 1871
SspI AATATT 2 cut(s) 2134, 2203
SspMI CTAG 4 cut(s) 800, 911, 1763, 1880
StyD4I CCNGG 3 cut(s) 500, 1576, 2125
StyI CCWWGG 1 cut(s) 97
TaaI ACNGT 4 cut(s) 422, 667, 1115, 1216
TaiI ACGT 2 cut(s) 49, 412
TaqI TCGA 9 cut(s) 49, 156, 199, 210, 294, 414, 426, 744, 2238
TatI WGTACW 1 cut(s) 1955
TauI GCSGC 2 cut(s) 386, 612
TfiI GAWTC 9 cut(s) 569, 626, 926, 984, 1431, 1487, 1847, 2091, 2180
TscAI CASTG 3 cut(s) 670, 979, 2334
TseI GCWGC 6 cut(s) 29, 122, 386, 464, 2097, 2253
TspDTI ATGAA 6 cut(s) 9, 291, 918, 1281, 1370, 1880
TspGWI ACGGA 3 cut(s) 521, 527, 1600
TspRI CASTG 3 cut(s) 670, 979, 2334
Vha464I CTTAAG 2 cut(s) 761, 2347
VneI GTGCAC 1 cut(s) 434
VpaK11BI GGWCC 3 cut(s) 188, 898, 1224
XagI CCTNNNNNAGG 2 cut(s) 200, 710
XapI RAATTY 6 cut(s) 740, 1268, 1455, 1781, 2040, 2297
XbaI TCTAGA 1 cut(s) 910
XceI RCATGY 2 cut(s) 122, 1377
XhoI CTCGAG 2 cut(s) 293, 2237
XmnI GAANNNNTTC 1 cut(s) 2307
XspI CTAG 4 cut(s) 800, 911, 1763, 1880
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.