Disease resistance protein (TIR-NBS-LRR class)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 118 - 145 | 4.8e-06 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 73 |
| AclI | AACGTT | 1 cut(s) | 322 |
| AclWI | GGATC | 1 cut(s) | 208 |
| AcsI | RAATTY | 1 cut(s) | 366 |
| AfaI | GTAC | 2 cut(s) | 192, 209 |
| AgsI | TTSAA | 4 cut(s) | 80, 255, 405, 452 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 177 |
| AluBI | AGCT | 2 cut(s) | 384, 418 |
| AluI | AGCT | 2 cut(s) | 384, 418 |
| Alw21I | GWGCWC | 1 cut(s) | 96 |
| Alw26I | GTCTC | 4 cut(s) | 2, 54, 130, 137 |
| AlwI | GGATC | 1 cut(s) | 208 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 164 |
| ApeKI | GCWGC | 1 cut(s) | 484 |
| ApoI | RAATTY | 1 cut(s) | 366 |
| AspS9I | GGNCC | 1 cut(s) | 398 |
| AsuC2I | CCSGG | 1 cut(s) | 357 |
| AvaII | GGWCC | 1 cut(s) | 398 |
| BanII | GRGCYC | 1 cut(s) | 45 |
| BbsI | GAAGAC | 1 cut(s) | 95 |
| Bbv12I | GWGCWC | 1 cut(s) | 96 |
| BbvI | GCAGC | 1 cut(s) | 471 |
| BccI | CCATC | 1 cut(s) | 512 |
| BcnI | CCSGG | 1 cut(s) | 357 |
| BcoDI | GTCTC | 4 cut(s) | 2, 54, 130, 137 |
| BfaI | CTAG | 3 cut(s) | 59, 107, 182 |
| BglII | AGATCT | 1 cut(s) | 498 |
| BisI | GCNGC | 2 cut(s) | 74, 485 |
| BlsI | GCNGC | 2 cut(s) | 75, 486 |
| BmcAI | AGTACT | 1 cut(s) | 192 |
| Bme1390I | CCNGG | 1 cut(s) | 357 |
| Bme18I | GGWCC | 1 cut(s) | 398 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 177 |
| BmgT120I | GGNCC | 1 cut(s) | 398 |
| BmiI | GGNNCC | 1 cut(s) | 399 |
| BmrFI | CCNGG | 1 cut(s) | 357 |
| BmsI | GCATC | 3 cut(s) | 33, 109, 265 |
| BpiI | GAAGAC | 1 cut(s) | 95 |
| BpmI | CTGGAG | 1 cut(s) | 154 |
| BpuEI | CTTGAG | 2 cut(s) | 29, 161 |
| BpuMI | CCSGG | 1 cut(s) | 357 |
| BsaBI | GATNNNNATC | 1 cut(s) | 503 |
| BsaI | GGTCTC | 1 cut(s) | 2 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 31 |
| Bse1I | ACTGG | 2 cut(s) | 89, 152 |
| Bse8I | GATNNNNATC | 1 cut(s) | 503 |
| BseGI | GGATG | 2 cut(s) | 277, 507 |
| BseJI | GATNNNNATC | 1 cut(s) | 503 |
| BseNI | ACTGG | 2 cut(s) | 89, 152 |
| BseXI | GCAGC | 1 cut(s) | 471 |
| BseYI | CCCAGC | 1 cut(s) | 20 |
| BsgI | GTGCAG | 1 cut(s) | 150 |
| BsiHKAI | GWGCWC | 1 cut(s) | 96 |
| BsiSI | CCGG | 1 cut(s) | 356 |
| BslFI | GGGAC | 1 cut(s) | 411 |
| BsmAI | GTCTC | 4 cut(s) | 2, 54, 130, 137 |
| BsmFI | GGGAC | 1 cut(s) | 411 |
| Bso31I | GGTCTC | 1 cut(s) | 2 |
| Bsp1286I | GDGCHC | 2 cut(s) | 45, 96 |
| Bsp143I | GATC | 4 cut(s) | 61, 184, 213, 498 |
| BspACI | CCGC | 1 cut(s) | 73 |
| BspLI | GGNNCC | 1 cut(s) | 399 |
| BspPI | GGATC | 1 cut(s) | 208 |
| BspTNI | GGTCTC | 1 cut(s) | 2 |
| BsrI | ACTGG | 2 cut(s) | 89, 152 |
| BssMI | GATC | 4 cut(s) | 61, 184, 213, 498 |
| Bst4CI | ACNGT | 3 cut(s) | 148, 195, 251 |
| Bst6I | CTCTTC | 1 cut(s) | 105 |
| BstC8I | GCNNGC | 1 cut(s) | 71 |
| BstF5I | GGATG | 2 cut(s) | 277, 507 |
| BstKTI | GATC | 4 cut(s) | 64, 187, 216, 501 |
| BstMAI | GTCTC | 4 cut(s) | 2, 54, 130, 137 |
| BstMBI | GATC | 4 cut(s) | 61, 184, 213, 498 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 424 |
| BstSCI | CCNGG | 1 cut(s) | 355 |
| BstV1I | GCAGC | 1 cut(s) | 471 |
| BstV2I | GAAGAC | 1 cut(s) | 95 |
| BstX2I | RGATCY | 2 cut(s) | 213, 498 |
| BstYI | RGATCY | 2 cut(s) | 213, 498 |
| BtsCI | GGATG | 2 cut(s) | 277, 507 |
| BtsIMutI | CAGTG | 4 cut(s) | 71, 96, 153, 165 |
| Cac8I | GCNNGC | 1 cut(s) | 71 |
| CaiI | CAGNNNCTG | 1 cut(s) | 164 |
| Cfr13I | GGNCC | 1 cut(s) | 398 |
| Csp6I | GTAC | 2 cut(s) | 191, 208 |
| CviAII | CATG | 2 cut(s) | 99, 493 |
| CviJI | RGCY | 4 cut(s) | 43, 76, 384, 418 |
| CviKI_1 | RGCY | 4 cut(s) | 43, 76, 384, 418 |
| CviQI | GTAC | 2 cut(s) | 191, 208 |
| DpnI | GATC | 4 cut(s) | 63, 186, 215, 500 |
| DpnII | GATC | 4 cut(s) | 61, 184, 213, 498 |
| DriI | GACNNNNNGTC | 1 cut(s) | 177 |
| Eam1104I | CTCTTC | 1 cut(s) | 105 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 177 |
| EarI | CTCTTC | 1 cut(s) | 105 |
| Eco24I | GRGCYC | 1 cut(s) | 45 |
| Eco31I | GGTCTC | 1 cut(s) | 2 |
| Eco47I | GGWCC | 1 cut(s) | 398 |
| EcoO109I | RGGNCCY | 1 cut(s) | 398 |
| EcoT38I | GRGCYC | 1 cut(s) | 45 |
| FaeI | CATG | 2 cut(s) | 102, 496 |
| FaiI | YATR | 5 cut(s) | 14, 100, 266, 293, 494 |
| FaqI | GGGAC | 1 cut(s) | 411 |
| FatI | CATG | 2 cut(s) | 98, 492 |
| Fnu4HI | GCNGC | 2 cut(s) | 74, 485 |
| FokI | GGATG | 2 cut(s) | 284, 494 |
| FriOI | GRGCYC | 1 cut(s) | 45 |
| Fsp4HI | GCNGC | 2 cut(s) | 74, 485 |
| FspBI | CTAG | 3 cut(s) | 59, 107, 182 |
| GluI | GCNGC | 2 cut(s) | 74, 485 |
| GsaI | CCCAGC | 1 cut(s) | 24 |
| GsuI | CTGGAG | 1 cut(s) | 154 |
| HapII | CCGG | 1 cut(s) | 356 |
| Hin1II | CATG | 2 cut(s) | 102, 496 |
| HindIII | AAGCTT | 1 cut(s) | 416 |
| HinfI | GANTC | 1 cut(s) | 448 |
| HpaII | CCGG | 1 cut(s) | 356 |
| Hpy188I | TCNGA | 3 cut(s) | 287, 436, 444 |
| Hpy188III | TCNNGA | 2 cut(s) | 107, 182 |
| HpyAV | CCTTC | 1 cut(s) | 411 |
| HpyCH4III | ACNGT | 3 cut(s) | 148, 195, 251 |
| HpyCH4IV | ACGT | 1 cut(s) | 322 |
| HpyCH4V | TGCA | 6 cut(s) | 69, 122, 167, 278, 427, 487 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 424 |
| HpySE526I | ACGT | 1 cut(s) | 322 |
| Hsp92II | CATG | 2 cut(s) | 102, 496 |
| Kzo9I | GATC | 4 cut(s) | 61, 184, 213, 498 |
| LmnI | GCTCC | 1 cut(s) | 99 |
| LpnPI | CCDG | 6 cut(s) | 34, 102, 118, 165, 183, 369 |
| Lsp1109I | GCAGC | 1 cut(s) | 471 |
| LweI | GCATC | 3 cut(s) | 33, 109, 265 |
| MaeI | CTAG | 3 cut(s) | 59, 107, 182 |
| MaeII | ACGT | 1 cut(s) | 322 |
| MaeIII | GTNAC | 2 cut(s) | 160, 260 |
| MalI | GATC | 4 cut(s) | 63, 186, 215, 500 |
| MboI | GATC | 4 cut(s) | 61, 184, 213, 498 |
| MboII | GAAGA | 4 cut(s) | 95, 122, 214, 508 |
| MflI | RGATCY | 2 cut(s) | 213, 498 |
| MhlI | GDGCHC | 2 cut(s) | 45, 96 |
| MluCI | AATT | 3 cut(s) | 238, 288, 366 |
| MnlI | CCTC | 4 cut(s) | 27, 337, 388, 432 |
| MseI | TTAA | 3 cut(s) | 237, 318, 414 |
| MspI | CCGG | 1 cut(s) | 356 |
| MspR9I | CCNGG | 1 cut(s) | 357 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 424 |
| NciI | CCSGG | 1 cut(s) | 357 |
| NdeII | GATC | 4 cut(s) | 61, 184, 213, 498 |
| NlaIII | CATG | 2 cut(s) | 102, 496 |
| NlaIV | GGNNCC | 1 cut(s) | 399 |
| NmuCI | GTSAC | 1 cut(s) | 160 |
| PfeI | GAWTC | 1 cut(s) | 448 |
| PfoI | TCCNGGA | 1 cut(s) | 355 |
| PkrI | GCNGC | 2 cut(s) | 75, 486 |
| PpuMI | RGGWCCY | 1 cut(s) | 398 |
| Psp1406I | AACGTT | 1 cut(s) | 322 |
| Psp5II | RGGWCCY | 1 cut(s) | 398 |
| PspFI | CCCAGC | 1 cut(s) | 20 |
| PspN4I | GGNNCC | 1 cut(s) | 399 |
| PspPI | GGNCC | 1 cut(s) | 398 |
| PspPPI | RGGWCCY | 1 cut(s) | 398 |
| PstNI | CAGNNNCTG | 1 cut(s) | 164 |
| PsuI | RGATCY | 2 cut(s) | 213, 498 |
| RsaI | GTAC | 2 cut(s) | 192, 209 |
| RsaNI | GTAC | 2 cut(s) | 191, 208 |
| SaqAI | TTAA | 3 cut(s) | 237, 318, 414 |
| SatI | GCNGC | 2 cut(s) | 74, 485 |
| Sau3AI | GATC | 4 cut(s) | 61, 184, 213, 498 |
| Sau96I | GGNCC | 1 cut(s) | 398 |
| ScaI | AGTACT | 1 cut(s) | 192 |
| ScrFI | CCNGG | 1 cut(s) | 357 |
| SduI | GDGCHC | 2 cut(s) | 45, 96 |
| SetI | ASST | 7 cut(s) | 19, 181, 325, 348, 386, 403, 420 |
| SfaNI | GCATC | 3 cut(s) | 33, 109, 265 |
| SinI | GGWCC | 1 cut(s) | 398 |
| SmlI | CTYRAG | 2 cut(s) | 44, 140 |
| SmoI | CTYRAG | 2 cut(s) | 44, 140 |
| Sse9I | AATT | 3 cut(s) | 238, 288, 366 |
| SsiI | CCGC | 1 cut(s) | 73 |
| SspI | AATATT | 1 cut(s) | 412 |
| SspMI | CTAG | 3 cut(s) | 59, 107, 182 |
| StyD4I | CCNGG | 1 cut(s) | 355 |
| TaaI | ACNGT | 3 cut(s) | 148, 195, 251 |
| TaiI | ACGT | 1 cut(s) | 325 |
| TasI | AATT | 3 cut(s) | 238, 288, 366 |
| TatI | WGTACW | 1 cut(s) | 190 |
| TauI | GCSGC | 1 cut(s) | 76 |
| TfiI | GAWTC | 1 cut(s) | 448 |
| Tru1I | TTAA | 3 cut(s) | 237, 318, 414 |
| Tru9I | TTAA | 3 cut(s) | 237, 318, 414 |
| TscAI | CASTG | 4 cut(s) | 71, 96, 153, 165 |
| TseFI | GTSAC | 1 cut(s) | 160 |
| TseI | GCWGC | 1 cut(s) | 484 |
| Tsp45I | GTSAC | 1 cut(s) | 160 |
| TspDTI | ATGAA | 4 cut(s) | 210, 378, 422, 509 |
| TspGWI | ACGGA | 1 cut(s) | 407 |
| TspRI | CASTG | 4 cut(s) | 71, 96, 153, 165 |
| VpaK11BI | GGWCC | 1 cut(s) | 398 |
| XapI | RAATTY | 1 cut(s) | 366 |
| XbaI | TCTAGA | 2 cut(s) | 106, 181 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 224 |
| XspI | CTAG | 3 cut(s) | 59, 107, 182 |
| ZrmI | AGTACT | 1 cut(s) | 192 |