MD05G1138500.v1.1

Toll - interleukin 1 - resistance

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
26892207 .. 26893896
1690 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1138500.v1.1.491

Sequence Viewer

Length: 969 bp
ATGACTCTGTTCTACACGTTCCGCTGCGGATTATTAAAATTTTCTTGTTGGACTCCTCCTAATGCTGCGTCTAATGATGCTGCTAATGATGATGACCACGAGGAGGATGATGATATCCCTCCTCACCAAGAAAAGTATGATGTGTTTATTAGTTTCAGAGGTGAGGACACCCGCCTTACTTTTACCAGCCATCTTCACGATGCCTTACTTCAGAAGAAAATTGAAACCTACATAGATTACAGGCTTGTAAGAGGAGAAGAAATCTGGCCTGCCCTGTTAGAAGCAATCCAGAAATCAACACTTTCGGTAATCATTTTGTCAAAAAGCTATGCTACTTCCACATGGTGTCTGGATGAACTTGTGCATATCCTAGAATGCAAGGAAAAATATGGCCAGATGGTTATACCCATTTTTTACGACATTAATCCATCAGAAGTTCGAAAACAACAGGGGAGTTACGCACATGCATTTGCTCAACTTGAAAAACGATTCAAGGGTAATGACAAGGTGCACAAGTGGAGGGCTGCTTTGGCGACTACAGCCAATCTATCCGGATTCGATAATACAACCAAAAAAGGGACGGAAGCTGACTTAGTTAAGCATGTGGTTGAGGATATTTGGACCAAATTGACTCGTGAATCATCATGTGATTTAAAGGGCCTGGTTGGAATTGAAGGCCGCATCAAGCAAATCGAGTCCTTATTATGCCTTGATTCGCCAGATGCTTGCAATACTGTAGGTATTTGGGGAATGGGTGGGATTGGAAAGACCACCCTTGCTGAAGCTGTATTTCATCGGCTATCATATAAGTTCGAAGCTTCTTGTTTTCTTCGAAATATTCGGGAGAGAGAACAAAAGGATGGGCTAGTTCAGTTGAGGAATACAATTGTTAAGGAGGTATTCAAGGAAAAAGATCTAAATATTGAAACTTCAACCATAGGGTCAACTCTTGTTAGAAAGAGGTCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

323

Amino Acids

36.68

Weight (kDa)

6.17

Isoelectric Point (pI)

45.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 45 - 224 3.8e-54 TIR domain
TIR_2 PF13676 48 - 143 3.9e-15 TIR domain
NB-ARC PF00931 231 - 308 1.2e-06 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 551
AciI CCGC 4 cut(s) 22, 27, 172, 679
AcoI YGGCCR 1 cut(s) 391
AcsI RAATTY 1 cut(s) 38
AcuI CTGAAG 2 cut(s) 194, 801
AdeI CACNNNGTG 1 cut(s) 345
AfiI CCNNNNNNNGG 2 cut(s) 103, 576
AflIII ACRYGT 1 cut(s) 15
AgsI TTSAA 7 cut(s) 224, 482, 493, 674, 904, 926, 933
AjnI CCWGG 1 cut(s) 660
AluBI AGCT 4 cut(s) 327, 587, 785, 818
AluI AGCT 4 cut(s) 327, 587, 785, 818
Alw21I GWGCWC 1 cut(s) 513
Alw44I GTGCAC 1 cut(s) 509
Aor13HI TCCGGA 1 cut(s) 551
AoxI GGCC 4 cut(s) 266, 391, 658, 676
ApaLI GTGCAC 1 cut(s) 509
ApeKI GCWGC 4 cut(s) 24, 65, 80, 524
ApoI RAATTY 1 cut(s) 38
AseI ATTAAT 1 cut(s) 423
AspS9I GGNCC 3 cut(s) 621, 658, 963
AsuHPI GGTGA 2 cut(s) 116, 173
AsuII TTCGAA 3 cut(s) 439, 813, 832
AvaII GGWCC 2 cut(s) 621, 963
BaeGI GKGCMC 1 cut(s) 513
BalI TGGCCA 1 cut(s) 393
BauI CACGAG 2 cut(s) 98, 633
Bbv12I GWGCWC 1 cut(s) 513
BbvI GCAGC 4 cut(s) 11, 52, 67, 511
BccI CCATC 4 cut(s) 198, 391, 436, 854
BciT130I CCWGG 1 cut(s) 662
BfaI CTAG 3 cut(s) 371, 866, 967
BfmI CTRYAG 2 cut(s) 537, 735
BglII AGATCT 1 cut(s) 913
BisI GCNGC 5 cut(s) 25, 66, 81, 525, 679
BlsI GCNGC 5 cut(s) 26, 67, 82, 526, 680
Bme1390I CCNGG 1 cut(s) 662
Bme18I GGWCC 2 cut(s) 621, 963
BmgT120I GGNCC 3 cut(s) 621, 658, 963
BmrFI CCNGG 1 cut(s) 662
BmsI GCATC 4 cut(s) 67, 190, 690, 712
Bpu14I TTCGAA 3 cut(s) 439, 813, 832
BsaWI WCCGGW 1 cut(s) 551
Bsc4I CCNNNNNNNGG 2 cut(s) 103, 576
BseAI TCCGGA 1 cut(s) 551
BseBI CCWGG 1 cut(s) 662
BseGI GGATG 3 cut(s) 112, 358, 865
BseLI CCNNNNNNNGG 2 cut(s) 103, 576
BseRI GAGGAG 4 cut(s) 45, 111, 116, 267
BseSI GKGCMC 1 cut(s) 513
BseXI GCAGC 4 cut(s) 11, 52, 67, 511
BshFI GGCC 4 cut(s) 268, 393, 660, 678
BsiHKAI GWGCWC 1 cut(s) 513
BsiSI CCGG 1 cut(s) 552
BslFI GGGAC 1 cut(s) 592
BslI CCNNNNNNNGG 2 cut(s) 103, 576
BsmFI GGGAC 1 cut(s) 592
BsmI GAATGC 1 cut(s) 380
BsnI GGCC 4 cut(s) 268, 393, 660, 678
Bsp119I TTCGAA 3 cut(s) 439, 813, 832
Bsp1286I GDGCHC 1 cut(s) 513
Bsp13I TCCGGA 1 cut(s) 551
Bsp143I GATC 1 cut(s) 913
BspACI CCGC 4 cut(s) 22, 27, 172, 679
BspANI GGCC 4 cut(s) 268, 393, 660, 678
BspEI TCCGGA 1 cut(s) 551
BspT104I TTCGAA 3 cut(s) 439, 813, 832
BssMI GATC 1 cut(s) 913
BssSI CACGAG 2 cut(s) 98, 633
Bst2BI CACGAG 2 cut(s) 98, 633
Bst2UI CCWGG 1 cut(s) 662
Bst4CI ACNGT 1 cut(s) 736
BstBI TTCGAA 3 cut(s) 439, 813, 832
BstC8I GCNNGC 2 cut(s) 270, 727
BstDEI CTNAG 1 cut(s) 592
BstF5I GGATG 3 cut(s) 112, 358, 865
BstKTI GATC 1 cut(s) 916
BstMBI GATC 1 cut(s) 913
BstMWI GCNNNNNNNGC 2 cut(s) 530, 539
BstNI CCWGG 1 cut(s) 662
BstNSI RCATGY 2 cut(s) 467, 605
BstSCI CCNGG 1 cut(s) 660
BstSFI CTRYAG 2 cut(s) 537, 735
BstSLI GKGCMC 1 cut(s) 513
BstV1I GCAGC 4 cut(s) 11, 52, 67, 511
BstX2I RGATCY 1 cut(s) 913
BstYI RGATCY 1 cut(s) 913
BsuRI GGCC 4 cut(s) 268, 393, 660, 678
BtsCI GGATG 3 cut(s) 112, 358, 865
Cac8I GCNNGC 2 cut(s) 270, 727
Cfr13I GGNCC 3 cut(s) 621, 658, 963
CseI GACGC 1 cut(s) 57
CviAII CATG 4 cut(s) 342, 464, 602, 645
DdeI CTNAG 1 cut(s) 592
DpnI GATC 1 cut(s) 915
DpnII GATC 1 cut(s) 913
DraI TTTAAA 1 cut(s) 654
DraIII CACNNNGTG 1 cut(s) 345
EaeI YGGCCR 1 cut(s) 391
Eco32I GATATC 1 cut(s) 115
Eco47I GGWCC 2 cut(s) 621, 963
Eco57I CTGAAG 2 cut(s) 194, 801
EcoO109I RGGNCCY 2 cut(s) 658, 963
EcoRII CCWGG 1 cut(s) 660
EcoRV GATATC 1 cut(s) 115
EcoT22I ATGCAT 1 cut(s) 469
FaeI CATG 4 cut(s) 345, 467, 605, 648
FaqI GGGAC 1 cut(s) 592
FatI CATG 4 cut(s) 341, 463, 601, 644
FauI CCCGC 1 cut(s) 179
Fnu4HI GCNGC 5 cut(s) 25, 66, 81, 525, 679
FokI GGATG 3 cut(s) 119, 365, 872
Fsp4HI GCNGC 5 cut(s) 25, 66, 81, 525, 679
FspBI CTAG 3 cut(s) 371, 866, 967
GluI GCNGC 5 cut(s) 25, 66, 81, 525, 679
HaeIII GGCC 4 cut(s) 268, 393, 660, 678
HapII CCGG 1 cut(s) 552
HgaI GACGC 1 cut(s) 57
Hin1II CATG 4 cut(s) 345, 467, 605, 648
HincII GTYRAC 1 cut(s) 945
HindII GTYRAC 1 cut(s) 945
HindIII AAGCTT 1 cut(s) 816
HinfI GANTC 8 cut(s) 4, 52, 489, 555, 631, 638, 695, 713
HpaII CCGG 1 cut(s) 552
HphI GGTGA 2 cut(s) 116, 173
Hpy166II GTNNAC 2 cut(s) 511, 945
Hpy188I TCNGA 3 cut(s) 158, 213, 433
Hpy188III TCNNGA 6 cut(s) 197, 289, 350, 552, 635, 842
Hpy8I GTNNAC 2 cut(s) 511, 945
HpyAV CCTTC 1 cut(s) 668
HpyCH4III ACNGT 1 cut(s) 736
HpyCH4IV ACGT 1 cut(s) 17
HpyCH4V TGCA 5 cut(s) 364, 378, 467, 511, 729
HpyF10VI GCNNNNNNNGC 2 cut(s) 530, 539
HpyF3I CTNAG 1 cut(s) 592
HpySE526I ACGT 1 cut(s) 17
Hsp92II CATG 4 cut(s) 345, 467, 605, 648
Kpn2I TCCGGA 1 cut(s) 551
Kzo9I GATC 1 cut(s) 913
Lsp1109I GCAGC 4 cut(s) 11, 52, 67, 511
LweI GCATC 4 cut(s) 67, 190, 690, 712
MaeI CTAG 3 cut(s) 371, 866, 967
MaeII ACGT 1 cut(s) 17
MaeIII GTNAC 1 cut(s) 455
MalI GATC 1 cut(s) 915
MboI GATC 1 cut(s) 913
MboII GAAGA 4 cut(s) 185, 226, 269, 821
MfeI CAATTG 1 cut(s) 885
MflI RGATCY 1 cut(s) 913
MhlI GDGCHC 1 cut(s) 513
MlsI TGGCCA 1 cut(s) 393
MluCI AATT 5 cut(s) 38, 219, 626, 669, 885
MluNI TGGCCA 1 cut(s) 393
MlyI GAGTC 3 cut(s) 46, 625, 704
MmeI TCCRAC 2 cut(s) 29, 646
Mox20I TGGCCA 1 cut(s) 393
Mph1103I ATGCAT 1 cut(s) 469
MroI TCCGGA 1 cut(s) 551
MscI TGGCCA 1 cut(s) 393
MseI TTAA 5 cut(s) 35, 423, 597, 653, 891
Msp20I TGGCCA 1 cut(s) 393
MspA1I CMGCKG 1 cut(s) 24
MspI CCGG 1 cut(s) 552
MspR9I CCNGG 1 cut(s) 662
MunI CAATTG 1 cut(s) 885
Mva1269I GAATGC 1 cut(s) 380
MvaI CCWGG 1 cut(s) 662
MwoI GCNNNNNNNGC 2 cut(s) 530, 539
NdeII GATC 1 cut(s) 913
NlaIII CATG 4 cut(s) 345, 467, 605, 648
NsiI ATGCAT 1 cut(s) 469
NspI RCATGY 2 cut(s) 467, 605
NspV TTCGAA 3 cut(s) 439, 813, 832
PctI GAATGC 1 cut(s) 380
PfeI GAWTC 4 cut(s) 489, 555, 638, 713
PkrI GCNGC 5 cut(s) 26, 67, 82, 526, 680
PleI GAGTC 3 cut(s) 46, 625, 703
PpsI GAGTC 3 cut(s) 46, 625, 703
PpuMI RGGWCCY 1 cut(s) 963
PshBI ATTAAT 1 cut(s) 423
Psp5II RGGWCCY 1 cut(s) 963
Psp6I CCWGG 1 cut(s) 660
PspGI CCWGG 1 cut(s) 660
PspPI GGNCC 3 cut(s) 621, 658, 963
PspPPI RGGWCCY 1 cut(s) 963
PsuI RGATCY 1 cut(s) 913
SaqAI TTAA 5 cut(s) 35, 423, 597, 653, 891
SatI GCNGC 5 cut(s) 25, 66, 81, 525, 679
Sau3AI GATC 1 cut(s) 913
Sau96I GGNCC 3 cut(s) 621, 658, 963
SchI GAGTC 3 cut(s) 46, 625, 704
ScrFI CCNGG 1 cut(s) 662
SduI GDGCHC 1 cut(s) 513
SfaNI GCATC 4 cut(s) 67, 190, 690, 712
SfcI CTRYAG 2 cut(s) 537, 735
SfuI TTCGAA 3 cut(s) 439, 813, 832
SinI GGWCC 2 cut(s) 621, 963
Sse9I AATT 5 cut(s) 38, 219, 626, 669, 885
SsiI CCGC 4 cut(s) 22, 27, 172, 679
SspI AATATT 2 cut(s) 838, 922
SspMI CTAG 3 cut(s) 371, 866, 967
StyD4I CCNGG 1 cut(s) 660
TaaI ACNGT 1 cut(s) 736
TaiI ACGT 1 cut(s) 20
TaqI TCGA 5 cut(s) 439, 558, 693, 813, 832
TasI AATT 5 cut(s) 38, 219, 626, 669, 885
TauI GCSGC 1 cut(s) 681
TfiI GAWTC 4 cut(s) 489, 555, 638, 713
Tru1I TTAA 5 cut(s) 35, 423, 597, 653, 891
Tru9I TTAA 5 cut(s) 35, 423, 597, 653, 891
TseI GCWGC 4 cut(s) 24, 65, 80, 524
TspDTI ATGAA 2 cut(s) 369, 782
TspGWI ACGGA 1 cut(s) 596
VneI GTGCAC 1 cut(s) 509
VpaK11BI GGWCC 2 cut(s) 621, 963
VspI ATTAAT 1 cut(s) 423
XapI RAATTY 1 cut(s) 38
XceI RCATGY 2 cut(s) 467, 605
XcmI CCANNNNNNNNNTGG 1 cut(s) 346
XspI CTAG 3 cut(s) 371, 866, 967
Zsp2I ATGCAT 1 cut(s) 469
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.