pycom04g02890

Toll - interleukin 1 - resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
2659161 .. 2664334
5174 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g02890.2

Sequence Viewer

Length: 3321 bp
ATGGATGATATTGAAGCTAATATCCCCCCTCATCGAGAAAAGAGACACAAACAGATGGATGGTATTGAAGCTAATATCCCCCCTCGTCGAGAAAAGAGACACAAACAGATGGATGGTATTGAAGCTAATATCCCCCCTCGTCGAGAAAAGTATGATGTGTTTATCAATTTCAGAGGTGAGGACACCCGCCTTGGTATTACCAGCCATCTTCATGCTGCCTTACTTCAGAAAAAAATTGAAACCTACATAGATTACAGACTTCAGAAAGGAGAAGAAATCGGACCTGCCCTTCGAGAGGCAATCGAGAAATCCACGCATTCGGTGATCATTTTCTCAAAAGACTATGCTTCTTCCACATGGTGTTTGGATGAGCTTGTGCATATACTCGAATGCAAGGAAAGATATGGCCAGAAGGTTATACCCATATTCTACAAAATCAAACCATCTTATGTACGAAAACAACACGGGAGTTATGCGGGTGCATTTGCTCAACTTGAAAAACGTTTCAAGGACAGTATTGATAAGGTGCACAAGTGGAGGGCTGCTTTGAAAACTGCAGCCGATCGGTCTGGGTTTGATTATTCAAACAAAGACGGGACGGAGGCAGATCTAATTAAGAATGTTGTCGATCATATTTGGACAAATTTGAAATGTGAATCATCATGTGATTTAGAGGAGGGCTTGGTTGGAATTGAAAGCCACATCGAGCAAATTGAATCGCTACTGGGCATTCATTCACAGGACGCTTGCATCACTGTAGGTATTTGGGGCATGGGTGGTATTGGCAAGACCACCCTTGCTGAAACTATATTTCACCGACTCTCTTCTAAATTCGAAGCTTCTTGTTTTCTTAAAAATGTCAGGGAGAAATCAGAACCACCAGATGGACTAGATCGCTTGCAAAATAAACTTCTGAGTGAGATATTAGGGGAAGAAGGTCTATCCATAGGATCGATTGGTGTTCAAAATAGGCTCAGTCGCACAAGGCTCCTCATTGTTCTTGATGATGTGAGTAGTCCAATGCAAATGCAGCTTTTAGCTGGTGATCGTCTTCGGTATGGCAATGGAAGTAGAATCATTATCACAAGTAGAGATAGGGACACACTTAGACAAACTGTTAAAGAGGATAATATCTATGAGGTTAAGGTATTAAAACCAGATGACGCTTTTCAGCTCTTCTGTTTGCATGCTTTCAAGGATAACACTACTCGTAGAACAGCTTATGAGGAGTTGGCGAAAAAGACCGTGGATTATGCCAGACGCGTTCCTTTAGCTCTTACAGTTCTGGGGTCCTTGTTCTTCAATTGCAAGAACAAAGAAGACTGGAAAGATGAATTCAACAAATTGAAACAATCTCCCAGTGAAGATATCCAGAAAGTGTTGAGAATAAGTTATGATAGATTGGGAAAATCTGAGAAGGAGGTATTTCTGGATATAGCATGTTTTCATAAGGGGATGAAAGTGAATGAGGTAAAGCGAATGTTAGATGTTCGTGGATTCTTTCCAACATCTGGAATTAGAATTCTCGTTGATAGGTCTCTCATATCAATTTATTCAGATAAATGGAAAGGGGAAATCATAGAGATGCACGATTCGCTACAAGAAATGGGAATGACAATTGTTCGGGAACAATGTATTGAAGATCCCGGTAAACGGAATAGGTTGTTCACGAATGAGGATGTCCATCATGTACTGAAGAGTAATACGGAAACTCCAATTGTTGAAGCCATTGAACTTAGTACGTCGTATGAGAGTGAAAAGCAACCATTGAACTTCAAACTGATGTCAAACCTAATAATGCTTATTGGGCATACTTTTGGATTATTAGACAACAAATCCGCTGCTTCTCTAGACCTTCCCGATTCTCTTCGTTACCTTTACTGGTGGGGATATTCACCGGAATCTTTGCCGTCAAAATTTTCCCCGGAAAATCTAGTTGAGCTTCATATGCCATGGAGCCGAGTTAAGAAGCTTTGGCAAGAAGACCAGAGACTTGTGAACTTACAAGTGATCGATCTGTTTCACTCTATGTATCTAACTGAAGTTCCAAATCTCTCTGGGAGTCTAAAAATTGTGAACATAAATCTCTTTGGCTGTGAAAGTTTGGTTGAAATTCCTGGGTATTTTCAAGATCTTGACGAGCTTACTCATCTTGATCTTCAAGGCTGCAGAAGTCTCAAGTATCTTCCAGAGATGCCAAGAAATATTGAATACTTGGATTTATCTGAGAGTGGTATAAAGCAGTTGCCCCAATCAGTTTGGTCTCATGAAAAAATTTCTTACTTGGGTATAAGTTCGTGCAGATACCTTGAGAAACTTCCAAGCAACAGGTGTAAGTTGAAAGTTTCTGGTTCATTTTATATAAATTCCTGCACATCTCTTGGCGAGTTTTCTGAGCTTCCCAGGGATATAAATGAATTATCATTGGTTAGTTGCACGAGACTTGTGAGTCTACCAACCAACGTTTGTAAGTTGAAATATCTCGAGGGACTCAATCTTTCCAGATGCTTTAAACTTGAAAACTTCCCAGAGATCTTGGAGCCAATGGAACATTTGAAGTCCTTAAATTTAAGTGGAACAGCGGTTCAAGAGCTACACTCATTAATCAAGTTTCTCCCTGCTCTCAAAAGACTTATACTAAAACGTTGCAAAAGGCTTTCAAGTATCCCAAAGAGCATTTGTACGTTGAAATATCTTGAGGTACTCAATCTCTCCGGCTGCTGTAAATTTGAAGACTTCCCAGAGATCTTGGAGCCAATGGAACATTTGAAGTTCTTAAATTTAAGAAAAACAGCGGTTCAAGAGCTACACTCATTGCTTGAGTTTCTCCCTGCTCTCAAAATACTTAACCTAGAACGTTGCAAAAGGCTTTCAAGTATCCCAAAGAGCATTTGTAAGTTGAAATATCTCGAGGAACTCAACCTCTCTTGGTGCTCCAAACTTGAAAACTTCCCTGAGATTTTGGAGCCAATGGAACATTTGCAGTCTTTAAATTTAAGTGGAACAGCGGTTCAAGTGCTACACTCATCTGTCGAGTTTCTCCCTGTGCTCAAAATACTTAAACTACGATTTTGCAGAAGCCTTTCAAGTATCCCAAAGAGCATTTGTAAGTTGAAATATCTCGAGGAACTCGATCGATCTTGGTGCTCCAAACTTGAAAACTTCCCAGAGATCTTGGAGCCAATGGAAGATTTGCGGTGCTTAAAATTATGTGGAACAGTGGTTCAAGAGCTTCACTTATCAGGCAAGTTTCTCCCTGCGCTCCAATGGAATTCACTGTTCTCCGAGGCAATGGAAGATTTTATGGAAGATTTTTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1107

Amino Acids

127.26

Weight (kDa)

6.78

Isoelectric Point (pI)

52.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2448
Acc36I ACCTGC 1 cut(s) 292
AccB7I CCANNNNNTGG 2 cut(s) 884, 1511
AccI GTMKAC 1 cut(s) 2452
AccII CGCG 1 cut(s) 1263
AciI CCGC 7 cut(s) 187, 476, 1839, 2582, 2795, 3008, 3196
AclI AACGTT 4 cut(s) 502, 2463, 2644, 2857
AclWI GGATC 2 cut(s) 958, 1637
AcoI YGGCCR 1 cut(s) 406
AcuI CTGAAG 4 cut(s) 209, 245, 1715, 2061
AdeI CACNNNGTG 1 cut(s) 360
AfaI GTAC 5 cut(s) 453, 1692, 1741, 2683, 2703
AfiI CCNNNNNNNGG 4 cut(s) 295, 884, 1511, 1653
AflIII ACRYGT 1 cut(s) 1261
AjnI CCWGG 2 cut(s) 2116, 2402
AloI GAACNNNNNNTCC 6 cut(s) 2568, 2600, 2994, 3026, 3207, 3239
Alw21I GWGCWC 4 cut(s) 531, 2936, 3051, 3149
Alw26I GTCTC 7 cut(s) 37, 91, 1542, 1984, 2180, 2268, 2434
Alw44I GTGCAC 1 cut(s) 527
AlwI GGATC 2 cut(s) 958, 1637
Ama87I CYCGRG 3 cut(s) 2483, 2909, 3122
AoxI GGCC 1 cut(s) 406
ApaLI GTGCAC 1 cut(s) 527
ApeKI GCWGC 7 cut(s) 215, 542, 557, 1030, 1841, 2166, 2718
ArsI GACNNNNNNTTYG 2 cut(s) 273, 305
AseI ATTAAT 1 cut(s) 2603
Asp700I GAANNNNTTC 1 cut(s) 3082
AspLEI GCGC 1 cut(s) 3262
AspS9I GGNCC 2 cut(s) 281, 1290
AsuC2I CCSGG 2 cut(s) 1647, 1925
AsuHPI GGTGA 5 cut(s) 188, 334, 806, 1055, 1887
AsuII TTCGAA 1 cut(s) 834
AvaI CYCGRG 3 cut(s) 2483, 2909, 3122
AvaII GGWCC 2 cut(s) 281, 1290
BaeGI GKGCMC 1 cut(s) 531
BalI TGGCCA 1 cut(s) 408
BauI CACGAG 1 cut(s) 2437
BbsI GAAGAC 4 cut(s) 1043, 1326, 1989, 2739
Bbv12I GWGCWC 4 cut(s) 531, 2936, 3051, 3149
BbvI GCAGC 7 cut(s) 202, 529, 569, 1042, 1828, 2153, 2705
BccI CCATC 8 cut(s) 49, 53, 103, 107, 213, 451, 878, 1692
BceAI ACGGC 1 cut(s) 1894
BcgI CGANNNNNNTGC 2 cut(s) 3126, 3160
BciT130I CCWGG 2 cut(s) 2118, 2404
BciVI GTATCC 3 cut(s) 2675, 2888, 3101
BclI TGATCA 1 cut(s) 324
BcnI CCSGG 2 cut(s) 1647, 1925
BcoDI GTCTC 7 cut(s) 37, 91, 1542, 1984, 2180, 2268, 2434
BfaI CTAG 4 cut(s) 890, 1850, 1934, 2852
BfmI CTRYAG 3 cut(s) 555, 756, 2167
BfuAI ACCTGC 1 cut(s) 292
BfuI GTATCC 3 cut(s) 2675, 2888, 3101
BglII AGATCT 5 cut(s) 607, 2131, 2532, 2745, 3171
BisI GCNGC 7 cut(s) 216, 543, 558, 1031, 1842, 2167, 2719
BlsI GCNGC 7 cut(s) 217, 544, 559, 1032, 1843, 2168, 2720
Bme1390I CCNGG 4 cut(s) 1647, 1925, 2118, 2404
Bme18I GGWCC 2 cut(s) 281, 1290
BmeT110I CYCGRG 3 cut(s) 2483, 2909, 3122
BmgT120I GGNCC 2 cut(s) 281, 1290
BmiI GGNNCC 7 cut(s) 989, 1291, 1958, 2541, 2754, 2967, 3180
BmrFI CCNGG 4 cut(s) 1647, 1925, 2118, 2404
BmrI ACTGGG 2 cut(s) 734, 1353
BmsI GCATC 4 cut(s) 759, 1575, 2184, 2495
BmuI ACTGGG 2 cut(s) 734, 1353
BpiI GAAGAC 4 cut(s) 1043, 1326, 1989, 2739
BplI GAGNNNNNCTC 4 cut(s) 2582, 2614, 2795, 2827
Bpu14I TTCGAA 1 cut(s) 834
BpuEI CTTGAG 4 cut(s) 2162, 2330, 2717, 2840
BpuMI CCSGG 2 cut(s) 1647, 1925
Bsa29I ATCGAT 3 cut(s) 953, 2013, 3136
BsaBI GATNNNNATC 1 cut(s) 1683
BsaI GGTCTC 2 cut(s) 1542, 2268
BsaJI CCNNGG 8 cut(s) 190, 1245, 1923, 1952, 2117, 2402, 2403, 3285
BsaWI WCCGGW 1 cut(s) 1897
BsaXI ACNNNNNCTCC 2 cut(s) 1696, 1726
Bsc4I CCNNNNNNNGG 4 cut(s) 295, 884, 1511, 1653
Bse1I ACTGG 4 cut(s) 729, 1328, 1359, 1886
Bse3DI GCAATG 3 cut(s) 1069, 2813, 3297
Bse8I GATNNNNATC 1 cut(s) 1683
BseBI CCWGG 2 cut(s) 2118, 2404
BseCI ATCGAT 3 cut(s) 953, 2013, 3136
BseDI CCNNGG 8 cut(s) 190, 1245, 1923, 1952, 2117, 2402, 2403, 3285
BseGI GGATG 6 cut(s) 10, 64, 118, 373, 1461, 1684
BseJI GATNNNNATC 1 cut(s) 1683
BseLI CCNNNNNNNGG 4 cut(s) 295, 884, 1511, 1653
BseMI GCAATG 3 cut(s) 1069, 2813, 3297
BseMII CTCAG 6 cut(s) 905, 988, 1404, 2217, 2385, 2946
BseNI ACTGG 4 cut(s) 729, 1328, 1359, 1886
BseRI GAGGAG 3 cut(s) 689, 980, 1241
BseSI GKGCMC 1 cut(s) 531
BseXI GCAGC 7 cut(s) 202, 529, 569, 1042, 1828, 2153, 2705
BsgI GTGCAG 2 cut(s) 2320, 2356
Bsh1236I CGCG 1 cut(s) 1263
Bsh1285I CGRYCG 2 cut(s) 565, 3136
BshFI GGCC 1 cut(s) 408
BshVI ATCGAT 3 cut(s) 953, 2013, 3136
BsiEI CGRYCG 2 cut(s) 565, 3136
BsiHKAI GWGCWC 4 cut(s) 531, 2936, 3051, 3149
BsiHKCI CYCGRG 3 cut(s) 2483, 2909, 3122
BsiSI CCGG 4 cut(s) 1647, 1898, 1925, 2715
BslFI GGGAC 3 cut(s) 610, 1112, 2502
BslI CCNNNNNNNGG 4 cut(s) 295, 884, 1511, 1653
BsmAI GTCTC 7 cut(s) 37, 91, 1542, 1984, 2180, 2268, 2434
BsmFI GGGAC 3 cut(s) 610, 1112, 2502
BsmI GAATGC 3 cut(s) 316, 395, 729
BsnI GGCC 1 cut(s) 408
Bso31I GGTCTC 2 cut(s) 1542, 2268
BsoBI CYCGRG 3 cut(s) 2483, 2909, 3122
Bsp119I TTCGAA 1 cut(s) 834
Bsp1286I GDGCHC 4 cut(s) 531, 2936, 3051, 3149
Bsp19I CCATGG 1 cut(s) 1952
BspACI CCGC 7 cut(s) 187, 476, 1839, 2582, 2795, 3008, 3196
BspANI GGCC 1 cut(s) 408
BspCNI CTCAG 6 cut(s) 906, 987, 1405, 2218, 2386, 2947
BspDI ATCGAT 3 cut(s) 953, 2013, 3136
BspFNI CGCG 1 cut(s) 1263
BspHI TCATGA 1 cut(s) 2266
BspLI GGNNCC 7 cut(s) 989, 1291, 1958, 2541, 2754, 2967, 3180
BspMAI CTGCAG 2 cut(s) 559, 2171
BspMI ACCTGC 1 cut(s) 292
BspPI GGATC 2 cut(s) 958, 1637
BspQI GCTCTTC 1 cut(s) 1181
BspT104I TTCGAA 1 cut(s) 834
BspTNI GGTCTC 2 cut(s) 1542, 2268
BsrDI GCAATG 3 cut(s) 1069, 2813, 3297
BsrI ACTGG 4 cut(s) 729, 1328, 1359, 1886
BssECI CCNNGG 8 cut(s) 190, 1245, 1923, 1952, 2117, 2402, 2403, 3285
BssSI CACGAG 1 cut(s) 2437
BssT1I CCWWGG 2 cut(s) 190, 1952
Bst2BI CACGAG 1 cut(s) 2437
Bst2UI CCWGG 2 cut(s) 2118, 2404
Bst4CI ACNGT 7 cut(s) 515, 757, 1117, 1246, 1282, 3220, 3279
Bst6I CTCTTC 4 cut(s) 829, 1181, 1691, 1872
BstBI TTCGAA 1 cut(s) 834
BstC8I GCNNGC 3 cut(s) 748, 899, 1188
BstDEI CTNAG 8 cut(s) 914, 974, 1106, 1413, 1736, 2226, 2394, 2955
BstDSI CCRYGG 2 cut(s) 1245, 1952
BstENI CCTNNNNNAGG 1 cut(s) 293
BstF5I GGATG 6 cut(s) 10, 64, 118, 373, 1461, 1684
BstFNI CGCG 1 cut(s) 1263
BstHHI GCGC 1 cut(s) 3262
BstMAI GTCTC 7 cut(s) 37, 91, 1542, 1984, 2180, 2268, 2434
BstMCI CGRYCG 2 cut(s) 565, 3136
BstMWI GCNNNNNNNGC 4 cut(s) 1030, 1594, 1807, 1948
BstNI CCWGG 2 cut(s) 2118, 2404
BstNSI RCATGY 2 cut(s) 1190, 1443
BstSCI CCNGG 4 cut(s) 1645, 1923, 2116, 2402
BstSFI CTRYAG 3 cut(s) 555, 756, 2167
BstSLI GKGCMC 1 cut(s) 531
BstUI CGCG 1 cut(s) 1263
BstV1I GCAGC 7 cut(s) 202, 529, 569, 1042, 1828, 2153, 2705
BstV2I GAAGAC 4 cut(s) 1043, 1326, 1989, 2739
BstX2I RGATCY 6 cut(s) 607, 1642, 2131, 2532, 2745, 3171
BstYI RGATCY 6 cut(s) 607, 1642, 2131, 2532, 2745, 3171
Bsu15I ATCGAT 3 cut(s) 953, 2013, 3136
BsuI GTATCC 3 cut(s) 2675, 2888, 3101
BsuRI GGCC 1 cut(s) 408
BsuTUI ATCGAT 3 cut(s) 953, 2013, 3136
BtgI CCRYGG 2 cut(s) 1245, 1952
BtsCI GGATG 6 cut(s) 10, 64, 118, 373, 1461, 1684
BtsIMutI CAGTG 4 cut(s) 753, 1366, 3225, 3275
BveI ACCTGC 1 cut(s) 292
Cac8I GCNNGC 3 cut(s) 748, 899, 1188
CciI TCATGA 1 cut(s) 2266
CfoI GCGC 1 cut(s) 3262
Cfr13I GGNCC 2 cut(s) 281, 1290
ClaI ATCGAT 3 cut(s) 953, 2013, 3136
CseI GACGC 3 cut(s) 752, 1172, 1269
Csp6I GTAC 5 cut(s) 452, 1691, 1740, 2682, 2702
CviAII CATG 9 cut(s) 212, 357, 663, 772, 1187, 1440, 1688, 1953, 2267
CviQI GTAC 5 cut(s) 452, 1691, 1740, 2682, 2702
DdeI CTNAG 8 cut(s) 914, 974, 1106, 1413, 1736, 2226, 2394, 2955
DraI TTTAAA 2 cut(s) 2512, 2991
DraIII CACNNNGTG 1 cut(s) 360
DrdI GACNNNNNNGTC 1 cut(s) 2448
DseDI GACNNNNNNGTC 1 cut(s) 2448
EaeI YGGCCR 1 cut(s) 406
Eam1104I CTCTTC 4 cut(s) 829, 1181, 1691, 1872
EarI CTCTTC 4 cut(s) 829, 1181, 1691, 1872
Eco130I CCWWGG 2 cut(s) 190, 1952
Eco31I GGTCTC 2 cut(s) 1542, 2268
Eco32I GATATC 1 cut(s) 1369
Eco47I GGWCC 2 cut(s) 281, 1290
Eco57I CTGAAG 4 cut(s) 209, 245, 1715, 2061
Eco88I CYCGRG 3 cut(s) 2483, 2909, 3122
EcoNI CCTNNNNNAGG 1 cut(s) 293
EcoO109I RGGNCCY 1 cut(s) 1290
EcoRI GAATTC 3 cut(s) 1334, 1521, 3271
EcoRII CCWGG 2 cut(s) 2116, 2402
EcoRV GATATC 1 cut(s) 1369
EcoT14I CCWWGG 2 cut(s) 190, 1952
ErhI CCWWGG 2 cut(s) 190, 1952
FaeI CATG 9 cut(s) 215, 360, 666, 775, 1190, 1443, 1691, 1956, 2270
FaqI GGGAC 3 cut(s) 610, 1112, 2502
FatI CATG 9 cut(s) 211, 356, 662, 771, 1186, 1439, 1687, 1952, 2266
FauI CCCGC 2 cut(s) 194, 469
FauNDI CATATG 1 cut(s) 1947
FbaI TGATCA 1 cut(s) 324
FblI GTMKAC 1 cut(s) 2452
Fnu4HI GCNGC 7 cut(s) 216, 543, 558, 1031, 1842, 2167, 2719
FokI GGATG 6 cut(s) 17, 71, 125, 380, 1468, 1691
Fsp4HI GCNGC 7 cut(s) 216, 543, 558, 1031, 1842, 2167, 2719
FspBI CTAG 4 cut(s) 890, 1850, 1934, 2852
GlaI GCGC 1 cut(s) 3261
GluI GCNGC 7 cut(s) 216, 543, 558, 1031, 1842, 2167, 2719
HaeIII GGCC 1 cut(s) 408
HapII CCGG 4 cut(s) 1647, 1898, 1925, 2715
HgaI GACGC 3 cut(s) 752, 1172, 1269
HhaI GCGC 1 cut(s) 3262
Hin1II CATG 9 cut(s) 215, 360, 666, 775, 1190, 1443, 1691, 1956, 2270
Hin6I GCGC 1 cut(s) 3260
HinP1I GCGC 1 cut(s) 3260
HindIII AAGCTT 2 cut(s) 837, 1970
HpaII CCGG 4 cut(s) 1647, 1898, 1925, 2715
HphI GGTGA 5 cut(s) 188, 334, 806, 1055, 1887
Hpy166II GTNNAC 6 cut(s) 529, 1652, 1668, 1999, 2077, 2453
Hpy8I GTNNAC 6 cut(s) 529, 1652, 1668, 1999, 2077, 2453
Hpy99I CGWCG 3 cut(s) 90, 144, 1747
HpyAV CCTTC 5 cut(s) 299, 406, 929, 1411, 1865
HpyCH4III ACNGT 7 cut(s) 515, 757, 1117, 1246, 1282, 3220, 3279
HpyCH4IV ACGT 6 cut(s) 502, 1742, 2463, 2644, 2684, 2857
HpyF10VI GCNNNNNNNGC 4 cut(s) 1030, 1594, 1807, 1948
HpyF3I CTNAG 8 cut(s) 914, 974, 1106, 1413, 1736, 2226, 2394, 2955
HpySE526I ACGT 6 cut(s) 502, 1742, 2463, 2644, 2684, 2857
Hsp92II CATG 9 cut(s) 215, 360, 666, 775, 1190, 1443, 1691, 1956, 2270
HspAI GCGC 1 cut(s) 3260
Ksp22I TGATCA 1 cut(s) 324
LguI GCTCTTC 1 cut(s) 1181
LmnI GCTCC 9 cut(s) 993, 1956, 2539, 2752, 2939, 2965, 3152, 3178, 3267
Lsp1109I GCAGC 7 cut(s) 202, 529, 569, 1042, 1828, 2153, 2705
LweI GCATC 4 cut(s) 759, 1575, 2184, 2495
MaeI CTAG 4 cut(s) 890, 1850, 1934, 2852
MaeII ACGT 6 cut(s) 502, 1742, 2463, 2644, 2684, 2857
MaeIII GTNAC 1 cut(s) 1871
MfeI CAATTG 3 cut(s) 1303, 1617, 1716
MflI RGATCY 6 cut(s) 607, 1642, 2131, 2532, 2745, 3171
MhlI GDGCHC 4 cut(s) 531, 2936, 3051, 3149
MlsI TGGCCA 1 cut(s) 408
MluI ACGCGT 1 cut(s) 1261
MluNI TGGCCA 1 cut(s) 408
MlyI GAGTC 4 cut(s) 813, 2071, 2458, 2484
MmeI TCCRAC 2 cut(s) 667, 1529
Mox20I TGGCCA 1 cut(s) 408
MroXI GAANNNNTTC 1 cut(s) 3082
MscI TGGCCA 1 cut(s) 408
MslI CAYNNNNRTG 2 cut(s) 210, 1583
Msp20I TGGCCA 1 cut(s) 408
MspA1I CMGCKG 4 cut(s) 1841, 2582, 2795, 3008
MspI CCGG 4 cut(s) 1647, 1898, 1925, 2715
MspR9I CCNGG 4 cut(s) 1647, 1925, 2118, 2404
MunI CAATTG 3 cut(s) 1303, 1617, 1716
Mva1269I GAATGC 3 cut(s) 316, 395, 729
MvaI CCWGG 2 cut(s) 2118, 2404
MvnI CGCG 1 cut(s) 1263
MwoI GCNNNNNNNGC 4 cut(s) 1030, 1594, 1807, 1948
NciI CCSGG 2 cut(s) 1647, 1925
NcoI CCATGG 1 cut(s) 1952
NdeI CATATG 1 cut(s) 1947
NlaIII CATG 9 cut(s) 215, 360, 666, 775, 1190, 1443, 1691, 1956, 2270
NlaIV GGNNCC 7 cut(s) 989, 1291, 1958, 2541, 2754, 2967, 3180
NmeAIII GCCGAG 1 cut(s) 1985
NspI RCATGY 2 cut(s) 1190, 1443
NspV TTCGAA 1 cut(s) 834
PaeI GCATGC 1 cut(s) 1190
PaeR7I CTCGAG 3 cut(s) 2483, 2909, 3122
PagI TCATGA 1 cut(s) 2266
PasI CCCWGGG 1 cut(s) 2403
PciSI GCTCTTC 1 cut(s) 1181
PcsI WCGNNNNNNNCGW 1 cut(s) 3129
PctI GAATGC 3 cut(s) 316, 395, 729
PdmI GAANNNNTTC 1 cut(s) 3082
PfeI GAWTC 7 cut(s) 656, 716, 1074, 1497, 1592, 1862, 1901
PflMI CCANNNNNTGG 2 cut(s) 884, 1511
PkrI GCNGC 7 cut(s) 217, 544, 559, 1032, 1843, 2168, 2720
Ple19I CGATCG 2 cut(s) 565, 3136
PleI GAGTC 4 cut(s) 813, 2070, 2457, 2484
PpsI GAGTC 4 cut(s) 813, 2070, 2457, 2484
PpuMI RGGWCCY 1 cut(s) 1290
PshBI ATTAAT 1 cut(s) 2603
Psp1406I AACGTT 4 cut(s) 502, 2463, 2644, 2857
Psp5II RGGWCCY 1 cut(s) 1290
Psp6I CCWGG 2 cut(s) 2116, 2402
PspGI CCWGG 2 cut(s) 2116, 2402
PspN4I GGNNCC 7 cut(s) 989, 1291, 1958, 2541, 2754, 2967, 3180
PspPI GGNCC 2 cut(s) 281, 1290
PspPPI RGGWCCY 1 cut(s) 1290
PstI CTGCAG 2 cut(s) 559, 2171
PsuI RGATCY 6 cut(s) 607, 1642, 2131, 2532, 2745, 3171
PvuI CGATCG 2 cut(s) 565, 3136
RsaI GTAC 5 cut(s) 453, 1692, 1741, 2683, 2703
RsaNI GTAC 5 cut(s) 452, 1691, 1740, 2682, 2702
RseI CAYNNNNRTG 2 cut(s) 210, 1583
SapI GCTCTTC 1 cut(s) 1181
SatI GCNGC 7 cut(s) 216, 543, 558, 1031, 1842, 2167, 2719
Sau96I GGNCC 2 cut(s) 281, 1290
SchI GAGTC 4 cut(s) 813, 2071, 2458, 2484
ScrFI CCNGG 4 cut(s) 1647, 1925, 2118, 2404
SduI GDGCHC 4 cut(s) 531, 2936, 3051, 3149
SfaNI GCATC 4 cut(s) 759, 1575, 2184, 2495
SfcI CTRYAG 3 cut(s) 555, 756, 2167
Sfr274I CTCGAG 3 cut(s) 2483, 2909, 3122
SfuI TTCGAA 1 cut(s) 834
SinI GGWCC 2 cut(s) 281, 1290
SlaI CTCGAG 3 cut(s) 2483, 2909, 3122
SmiMI CAYNNNNRTG 2 cut(s) 210, 1583
SmlI CTYRAG 7 cut(s) 2177, 2309, 2483, 2696, 2819, 2909, 3122
SmoI CTYRAG 7 cut(s) 2177, 2309, 2483, 2696, 2819, 2909, 3122
SphI GCATGC 1 cut(s) 1190
SsiI CCGC 7 cut(s) 187, 476, 1839, 2582, 2795, 3008, 3196
SspI AATATT 1 cut(s) 2206
SspMI CTAG 4 cut(s) 890, 1850, 1934, 2852
StyD4I CCNGG 4 cut(s) 1645, 1923, 2116, 2402
StyI CCWWGG 2 cut(s) 190, 1952
TaaI ACNGT 7 cut(s) 515, 757, 1117, 1246, 1282, 3220, 3279
TaiI ACGT 6 cut(s) 505, 1745, 2466, 2647, 2687, 2860
TaqII GACCGA 1 cut(s) 555
TatI WGTACW 1 cut(s) 1690
TfiI GAWTC 7 cut(s) 656, 716, 1074, 1497, 1592, 1862, 1901
TscAI CASTG 4 cut(s) 760, 1366, 3225, 3282
TseI GCWGC 7 cut(s) 215, 542, 557, 1030, 1841, 2166, 2718
TspDTI ATGAA 9 cut(s) 200, 722, 1347, 1436, 1472, 1934, 2283, 2343, 2430
TspGWI ACGGA 3 cut(s) 614, 1669, 1721
TspRI CASTG 4 cut(s) 760, 1366, 3225, 3282
Van91I CCANNNNNTGG 2 cut(s) 884, 1511
VneI GTGCAC 1 cut(s) 527
VpaK11BI GGWCC 2 cut(s) 281, 1290
VspI ATTAAT 1 cut(s) 2603
XagI CCTNNNNNAGG 1 cut(s) 293
XbaI TCTAGA 1 cut(s) 1849
XceI RCATGY 2 cut(s) 1190, 1443
XcmI CCANNNNNNNNNTGG 1 cut(s) 361
XhoI CTCGAG 3 cut(s) 2483, 2909, 3122
XmiI GTMKAC 1 cut(s) 2452
XmnI GAANNNNTTC 1 cut(s) 3082
XspI CTAG 4 cut(s) 890, 1850, 1934, 2852
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.