TMV resistance protein N-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 187 |
| Acc16I | TGCGCA | 2 cut(s) | 273, 1721 |
| Acc36I | ACCTGC | 1 cut(s) | 187 |
| AccI | GTMKAC | 1 cut(s) | 86 |
| AccII | CGCG | 1 cut(s) | 891 |
| AciI | CCGC | 3 cut(s) | 299, 1077, 1298 |
| AclWI | GGATC | 5 cut(s) | 350, 745, 1409, 1524, 1986 |
| AcsI | RAATTY | 4 cut(s) | 818, 1139, 1266, 1935 |
| AcuI | CTGAAG | 2 cut(s) | 1506, 1677 |
| AfaI | GTAC | 6 cut(s) | 769, 894, 1012, 1483, 1607, 1852 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 734, 1795 |
| AflIII | ACRYGT | 1 cut(s) | 889 |
| AgsI | TTSAA | 6 cut(s) | 208, 502, 1135, 1759, 1844, 1865 |
| AjnI | CCWGG | 6 cut(s) | 534, 1417, 1610, 1639, 1788, 1951 |
| AluBI | AGCT | 7 cut(s) | 614, 827, 956, 964, 980, 1711, 1897 |
| AluI | AGCT | 7 cut(s) | 614, 827, 956, 964, 980, 1711, 1897 |
| Alw21I | GWGCWC | 5 cut(s) | 387, 903, 966, 1465, 1632 |
| Alw26I | GTCTC | 4 cut(s) | 104, 601, 1101, 1329 |
| Alw44I | GTGCAC | 2 cut(s) | 1461, 1628 |
| AlwI | GGATC | 5 cut(s) | 350, 745, 1409, 1524, 1986 |
| Ama87I | CYCGRG | 2 cut(s) | 452, 1826 |
| AoxI | GGCC | 4 cut(s) | 449, 532, 850, 1752 |
| ApaLI | GTGCAC | 2 cut(s) | 1461, 1628 |
| ApeKI | GCWGC | 6 cut(s) | 5, 8, 413, 618, 1544, 1920 |
| ApoI | RAATTY | 4 cut(s) | 818, 1139, 1266, 1935 |
| AseI | ATTAAT | 2 cut(s) | 1251, 1836 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 684, 1392 |
| AspLEI | GCGC | 2 cut(s) | 274, 1722 |
| AspS9I | GGNCC | 1 cut(s) | 450 |
| AsuC2I | CCSGG | 1 cut(s) | 82 |
| AsuHPI | GGTGA | 7 cut(s) | 22, 83, 85, 574, 581, 845, 1130 |
| AsuII | TTCGAA | 2 cut(s) | 609, 1554 |
| AvaI | CYCGRG | 2 cut(s) | 452, 1826 |
| AxyI | CCTNAGG | 1 cut(s) | 36 |
| BaeGI | GKGCMC | 2 cut(s) | 1465, 1632 |
| BanII | GRGCYC | 1 cut(s) | 966 |
| BbsI | GAAGAC | 1 cut(s) | 1301 |
| Bbv12I | GWGCWC | 5 cut(s) | 387, 903, 966, 1465, 1632 |
| BbvCI | CCTCAGC | 1 cut(s) | 1794 |
| BbvI | GCAGC | 4 cut(s) | 425, 605, 1531, 1907 |
| BccI | CCATC | 5 cut(s) | 108, 347, 367, 524, 1687 |
| BceAI | ACGGC | 1 cut(s) | 364 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1643, 1677 |
| BciT130I | CCWGG | 6 cut(s) | 536, 1419, 1612, 1641, 1790, 1953 |
| BcnI | CCSGG | 1 cut(s) | 82 |
| BcoDI | GTCTC | 4 cut(s) | 104, 601, 1101, 1329 |
| BfaI | CTAG | 1 cut(s) | 1580 |
| BfuAI | ACCTGC | 1 cut(s) | 187 |
| BglII | AGATCT | 1 cut(s) | 1804 |
| BisI | GCNGC | 6 cut(s) | 6, 9, 414, 619, 1545, 1921 |
| BlsI | GCNGC | 6 cut(s) | 7, 10, 415, 620, 1546, 1922 |
| Bme1390I | CCNGG | 7 cut(s) | 82, 536, 1419, 1612, 1641, 1790, 1953 |
| BmeT110I | CYCGRG | 2 cut(s) | 452, 1826 |
| BmgT120I | GGNCC | 1 cut(s) | 450 |
| BmiI | GGNNCC | 2 cut(s) | 1348, 1800 |
| BmrFI | CCNGG | 7 cut(s) | 82, 536, 1419, 1612, 1641, 1790, 1953 |
| BmrI | ACTGGG | 1 cut(s) | 1120 |
| BmsI | GCATC | 7 cut(s) | 653, 1347, 1551, 1556, 1773, 1894, 1938 |
| BmuI | ACTGGG | 1 cut(s) | 1120 |
| BoxI | GACNNNNGTC | 1 cut(s) | 476 |
| BpiI | GAAGAC | 1 cut(s) | 1301 |
| BpmI | CTGGAG | 4 cut(s) | 719, 849, 1065, 1623 |
| Bpu10I | CCTNAGC | 2 cut(s) | 386, 1794 |
| Bpu14I | TTCGAA | 2 cut(s) | 609, 1554 |
| BpuEI | CTTGAG | 2 cut(s) | 917, 1753 |
| BpuMI | CCSGG | 1 cut(s) | 82 |
| Bsa29I | ATCGAT | 1 cut(s) | 1767 |
| BsaAI | YACGTR | 1 cut(s) | 1537 |
| BsaBI | GATNNNNATC | 2 cut(s) | 840, 1977 |
| BsaJI | CCNNGG | 3 cut(s) | 655, 853, 1611 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 734, 1795 |
| Bse1I | ACTGG | 3 cut(s) | 417, 702, 1115 |
| Bse21I | CCTNAGG | 1 cut(s) | 36 |
| Bse3DI | GCAATG | 1 cut(s) | 1090 |
| Bse8I | GATNNNNATC | 2 cut(s) | 840, 1977 |
| BseBI | CCWGG | 6 cut(s) | 536, 1419, 1612, 1641, 1790, 1953 |
| BseCI | ATCGAT | 1 cut(s) | 1767 |
| BseDI | CCNNGG | 3 cut(s) | 655, 853, 1611 |
| BseGI | GGATG | 2 cut(s) | 268, 1547 |
| BseJI | GATNNNNATC | 2 cut(s) | 840, 1977 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 734, 1795 |
| BseMI | GCAATG | 1 cut(s) | 1090 |
| BseMII | CTCAG | 5 cut(s) | 50, 400, 1785, 1803, 1921 |
| BseNI | ACTGG | 3 cut(s) | 417, 702, 1115 |
| BseRI | GAGGAG | 1 cut(s) | 177 |
| BseSI | GKGCMC | 2 cut(s) | 1465, 1632 |
| BseXI | GCAGC | 4 cut(s) | 425, 605, 1531, 1907 |
| BsgI | GTGCAG | 1 cut(s) | 165 |
| Bsh1236I | CGCG | 1 cut(s) | 891 |
| BshFI | GGCC | 4 cut(s) | 451, 534, 852, 1754 |
| BshVI | ATCGAT | 1 cut(s) | 1767 |
| BsiHKAI | GWGCWC | 5 cut(s) | 387, 903, 966, 1465, 1632 |
| BsiHKCI | CYCGRG | 2 cut(s) | 452, 1826 |
| BsiSI | CCGG | 1 cut(s) | 82 |
| BslFI | GGGAC | 2 cut(s) | 389, 1604 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 734, 1795 |
| BsmAI | GTCTC | 4 cut(s) | 104, 601, 1101, 1329 |
| BsmFI | GGGAC | 2 cut(s) | 389, 1604 |
| BsmI | GAATGC | 2 cut(s) | 290, 1546 |
| BsnI | GGCC | 4 cut(s) | 451, 534, 852, 1754 |
| BsoBI | CYCGRG | 2 cut(s) | 452, 1826 |
| Bsp119I | TTCGAA | 2 cut(s) | 609, 1554 |
| Bsp1286I | GDGCHC | 5 cut(s) | 387, 903, 966, 1465, 1632 |
| Bsp1407I | TGTACA | 3 cut(s) | 767, 1010, 1850 |
| Bsp143I | GATC | 7 cut(s) | 355, 737, 1414, 1516, 1768, 1804, 1978 |
| BspACI | CCGC | 3 cut(s) | 299, 1077, 1298 |
| BspANI | GGCC | 4 cut(s) | 451, 534, 852, 1754 |
| BspCNI | CTCAG | 5 cut(s) | 49, 399, 1786, 1804, 1920 |
| BspDI | ATCGAT | 1 cut(s) | 1767 |
| BspFNI | CGCG | 1 cut(s) | 891 |
| BspHI | TCATGA | 1 cut(s) | 1506 |
| BspLI | GGNNCC | 2 cut(s) | 1348, 1800 |
| BspMI | ACCTGC | 1 cut(s) | 187 |
| BspPI | GGATC | 5 cut(s) | 350, 745, 1409, 1524, 1986 |
| BspT104I | TTCGAA | 2 cut(s) | 609, 1554 |
| BsrDI | GCAATG | 1 cut(s) | 1090 |
| BsrGI | TGTACA | 3 cut(s) | 767, 1010, 1850 |
| BsrI | ACTGG | 3 cut(s) | 417, 702, 1115 |
| BssECI | CCNNGG | 3 cut(s) | 655, 853, 1611 |
| BssMI | GATC | 7 cut(s) | 355, 737, 1414, 1516, 1768, 1804, 1978 |
| BssNAI | GTATAC | 1 cut(s) | 87 |
| BssT1I | CCWWGG | 1 cut(s) | 853 |
| Bst1107I | GTATAC | 1 cut(s) | 87 |
| Bst2UI | CCWGG | 6 cut(s) | 536, 1419, 1612, 1641, 1790, 1953 |
| Bst4CI | ACNGT | 5 cut(s) | 327, 475, 593, 656, 905 |
| Bst6I | CTCTTC | 2 cut(s) | 604, 1000 |
| BstAUI | TGTACA | 3 cut(s) | 767, 1010, 1850 |
| BstBAI | YACGTR | 1 cut(s) | 1537 |
| BstBI | TTCGAA | 2 cut(s) | 609, 1554 |
| BstC8I | GCNNGC | 4 cut(s) | 616, 1443, 1899, 1918 |
| BstDEI | CTNAG | 9 cut(s) | 36, 59, 386, 1571, 1772, 1794, 1812, 1907, 1969 |
| BstDSI | CCRYGG | 1 cut(s) | 655 |
| BstEII | GGTNACC | 1 cut(s) | 562 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1793 |
| BstF5I | GGATG | 2 cut(s) | 268, 1547 |
| BstFNI | CGCG | 1 cut(s) | 891 |
| BstHHI | GCGC | 2 cut(s) | 274, 1722 |
| BstKTI | GATC | 7 cut(s) | 358, 740, 1417, 1519, 1771, 1807, 1981 |
| BstMAI | GTCTC | 4 cut(s) | 104, 601, 1101, 1329 |
| BstMBI | GATC | 7 cut(s) | 355, 737, 1414, 1516, 1768, 1804, 1978 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 1717, 1734, 1898, 1903 |
| BstNI | CCWGG | 6 cut(s) | 536, 1419, 1612, 1641, 1790, 1953 |
| BstNSI | RCATGY | 1 cut(s) | 50 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 476 |
| BstPI | GGTNACC | 1 cut(s) | 562 |
| BstSCI | CCNGG | 7 cut(s) | 80, 534, 1417, 1610, 1639, 1788, 1951 |
| BstSLI | GKGCMC | 2 cut(s) | 1465, 1632 |
| BstUI | CGCG | 1 cut(s) | 891 |
| BstV1I | GCAGC | 4 cut(s) | 425, 605, 1531, 1907 |
| BstV2I | GAAGAC | 1 cut(s) | 1301 |
| BstX2I | RGATCY | 4 cut(s) | 355, 1414, 1516, 1804 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1789 |
| BstYI | RGATCY | 4 cut(s) | 355, 1414, 1516, 1804 |
| BstZ17I | GTATAC | 1 cut(s) | 87 |
| Bsu15I | ATCGAT | 1 cut(s) | 1767 |
| Bsu36I | CCTNAGG | 1 cut(s) | 36 |
| BsuRI | GGCC | 4 cut(s) | 451, 534, 852, 1754 |
| BsuTUI | ATCGAT | 1 cut(s) | 1767 |
| BtgI | CCRYGG | 1 cut(s) | 655 |
| BtsCI | GGATG | 2 cut(s) | 268, 1547 |
| BtsIMutI | CAGTG | 2 cut(s) | 205, 1463 |
| BveI | ACCTGC | 1 cut(s) | 187 |
| Cac8I | GCNNGC | 4 cut(s) | 616, 1443, 1899, 1918 |
| CciI | TCATGA | 1 cut(s) | 1506 |
| CfoI | GCGC | 2 cut(s) | 274, 1722 |
| Cfr13I | GGNCC | 1 cut(s) | 450 |
| ClaI | ATCGAT | 1 cut(s) | 1767 |
| Csp6I | GTAC | 6 cut(s) | 768, 893, 1011, 1482, 1606, 1851 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1011, 1046 |
| CviAII | CATG | 6 cut(s) | 47, 252, 1361, 1501, 1507, 2007 |
| CviQI | GTAC | 6 cut(s) | 768, 893, 1011, 1482, 1606, 1851 |
| DdeI | CTNAG | 9 cut(s) | 36, 59, 386, 1571, 1772, 1794, 1812, 1907, 1969 |
| DpnI | GATC | 7 cut(s) | 357, 739, 1416, 1518, 1770, 1806, 1980 |
| DpnII | GATC | 7 cut(s) | 355, 737, 1414, 1516, 1768, 1804, 1978 |
| DraI | TTTAAA | 1 cut(s) | 1272 |
| Eam1104I | CTCTTC | 2 cut(s) | 604, 1000 |
| EarI | CTCTTC | 2 cut(s) | 604, 1000 |
| EciI | GGCGGA | 1 cut(s) | 1092 |
| Ecl136II | GAGCTC | 1 cut(s) | 964 |
| Eco130I | CCWWGG | 1 cut(s) | 853 |
| Eco147I | AGGCCT | 1 cut(s) | 1754 |
| Eco24I | GRGCYC | 1 cut(s) | 966 |
| Eco32I | GATATC | 2 cut(s) | 28, 1222 |
| Eco53kI | GAGCTC | 1 cut(s) | 964 |
| Eco57I | CTGAAG | 2 cut(s) | 1506, 1677 |
| Eco81I | CCTNAGG | 1 cut(s) | 36 |
| Eco88I | CYCGRG | 2 cut(s) | 452, 1826 |
| Eco91I | GGTNACC | 1 cut(s) | 562 |
| EcoICRI | GAGCTC | 1 cut(s) | 964 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1793 |
| EcoO65I | GGTNACC | 1 cut(s) | 562 |
| EcoRII | CCWGG | 6 cut(s) | 534, 1417, 1610, 1639, 1788, 1951 |
| EcoRV | GATATC | 2 cut(s) | 28, 1222 |
| EcoT14I | CCWWGG | 1 cut(s) | 853 |
| EcoT22I | ATGCAT | 2 cut(s) | 1362, 1566 |
| EcoT38I | GRGCYC | 1 cut(s) | 966 |
| ErhI | CCWWGG | 1 cut(s) | 853 |
| FaeI | CATG | 6 cut(s) | 50, 255, 1364, 1504, 1510, 2010 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1617, 1649 |
| FaqI | GGGAC | 2 cut(s) | 389, 1604 |
| FatI | CATG | 6 cut(s) | 46, 251, 1360, 1500, 1506, 2006 |
| FauI | CCCGC | 1 cut(s) | 1291 |
| FauNDI | CATATG | 1 cut(s) | 1716 |
| FblI | GTMKAC | 1 cut(s) | 86 |
| Fnu4HI | GCNGC | 6 cut(s) | 6, 9, 414, 619, 1545, 1921 |
| FokI | GGATG | 2 cut(s) | 275, 1534 |
| FriOI | GRGCYC | 1 cut(s) | 966 |
| Fsp4HI | GCNGC | 6 cut(s) | 6, 9, 414, 619, 1545, 1921 |
| FspBI | CTAG | 1 cut(s) | 1580 |
| FspI | TGCGCA | 2 cut(s) | 273, 1721 |
| GlaI | GCGC | 2 cut(s) | 273, 1721 |
| GluI | GCNGC | 6 cut(s) | 6, 9, 414, 619, 1545, 1921 |
| GsuI | CTGGAG | 4 cut(s) | 719, 849, 1065, 1623 |
| HaeIII | GGCC | 4 cut(s) | 451, 534, 852, 1754 |
| HapII | CCGG | 1 cut(s) | 82 |
| HhaI | GCGC | 2 cut(s) | 274, 1722 |
| Hin1II | CATG | 6 cut(s) | 50, 255, 1364, 1504, 1510, 2010 |
| Hin6I | GCGC | 2 cut(s) | 272, 1720 |
| HinP1I | GCGC | 2 cut(s) | 272, 1720 |
| HindIII | AAGCTT | 3 cut(s) | 612, 954, 1895 |
| HinfI | GANTC | 5 cut(s) | 311, 455, 864, 1778, 1816 |
| HpaII | CCGG | 1 cut(s) | 82 |
| HphI | GGTGA | 7 cut(s) | 22, 83, 85, 574, 581, 845, 1130 |
| Hpy166II | GTNNAC | 5 cut(s) | 87, 659, 1463, 1608, 1630 |
| Hpy8I | GTNNAC | 5 cut(s) | 87, 659, 1463, 1608, 1630 |
| Hpy99I | CGWCG | 1 cut(s) | 1461 |
| HpyAV | CCTTC | 6 cut(s) | 1109, 1198, 1561, 1643, 1838, 1881 |
| HpyCH4III | ACNGT | 5 cut(s) | 327, 475, 593, 656, 905 |
| HpyCH4IV | ACGT | 2 cut(s) | 945, 1536 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 1717, 1734, 1898, 1903 |
| HpyF3I | CTNAG | 9 cut(s) | 36, 59, 386, 1571, 1772, 1794, 1812, 1907, 1969 |
| HpySE526I | ACGT | 2 cut(s) | 945, 1536 |
| Hsp92II | CATG | 6 cut(s) | 50, 255, 1364, 1504, 1510, 2010 |
| HspAI | GCGC | 2 cut(s) | 272, 1720 |
| Kzo9I | GATC | 7 cut(s) | 355, 737, 1414, 1516, 1768, 1804, 1978 |
| LmnI | GCTCC | 1 cut(s) | 1928 |
| Lsp1109I | GCAGC | 4 cut(s) | 425, 605, 1531, 1907 |
| LweI | GCATC | 7 cut(s) | 653, 1347, 1551, 1556, 1773, 1894, 1938 |
| MaeI | CTAG | 1 cut(s) | 1580 |
| MaeII | ACGT | 2 cut(s) | 945, 1536 |
| MaeIII | GTNAC | 4 cut(s) | 562, 871, 1232, 1775 |
| MalI | GATC | 7 cut(s) | 357, 739, 1416, 1518, 1770, 1806, 1980 |
| MboI | GATC | 7 cut(s) | 355, 737, 1414, 1516, 1768, 1804, 1978 |
| MboII | GAAGA | 8 cut(s) | 6, 136, 237, 334, 591, 987, 1301, 1683 |
| MflI | RGATCY | 4 cut(s) | 355, 1414, 1516, 1804 |
| MhlI | GDGCHC | 5 cut(s) | 387, 903, 966, 1465, 1632 |
| MluI | ACGCGT | 1 cut(s) | 889 |
| MlyI | GAGTC | 3 cut(s) | 464, 1772, 1825 |
| Mph1103I | ATGCAT | 2 cut(s) | 1362, 1566 |
| MroXI | GAANNNNTTC | 2 cut(s) | 684, 1392 |
| MseI | TTAA | 8 cut(s) | 468, 933, 1065, 1175, 1251, 1271, 1410, 1836 |
| MslI | CAYNNNNRTG | 6 cut(s) | 105, 1251, 1319, 1334, 1355, 1505 |
| MspI | CCGG | 1 cut(s) | 82 |
| MspR9I | CCNGG | 7 cut(s) | 82, 536, 1419, 1612, 1641, 1790, 1953 |
| Mva1269I | GAATGC | 2 cut(s) | 290, 1546 |
| MvaI | CCWGG | 6 cut(s) | 536, 1419, 1612, 1641, 1790, 1953 |
| MvnI | CGCG | 1 cut(s) | 891 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 1717, 1734, 1898, 1903 |
| NciI | CCSGG | 1 cut(s) | 82 |
| NdeI | CATATG | 1 cut(s) | 1716 |
| NdeII | GATC | 7 cut(s) | 355, 737, 1414, 1516, 1768, 1804, 1978 |
| NlaIII | CATG | 6 cut(s) | 50, 255, 1364, 1504, 1510, 2010 |
| NlaIV | GGNNCC | 2 cut(s) | 1348, 1800 |
| NmuCI | GTSAC | 3 cut(s) | 562, 1232, 1775 |
| NsbI | TGCGCA | 2 cut(s) | 273, 1721 |
| NsiI | ATGCAT | 2 cut(s) | 1362, 1566 |
| NspI | RCATGY | 1 cut(s) | 50 |
| NspV | TTCGAA | 2 cut(s) | 609, 1554 |
| PaeR7I | CTCGAG | 1 cut(s) | 1826 |
| PagI | TCATGA | 1 cut(s) | 1506 |
| PaqCI | CACCTGC | 1 cut(s) | 187 |
| PceI | AGGCCT | 1 cut(s) | 1754 |
| PctI | GAATGC | 2 cut(s) | 290, 1546 |
| PdmI | GAANNNNTTC | 2 cut(s) | 684, 1392 |
| PfeI | GAWTC | 2 cut(s) | 311, 864 |
| PfoI | TCCNGGA | 1 cut(s) | 1417 |
| PkrI | GCNGC | 6 cut(s) | 7, 10, 415, 620, 1546, 1922 |
| PleI | GAGTC | 3 cut(s) | 463, 1772, 1824 |
| PpsI | GAGTC | 3 cut(s) | 463, 1772, 1824 |
| Ppu21I | YACGTR | 1 cut(s) | 1537 |
| PshAI | GACNNNNGTC | 1 cut(s) | 476 |
| PshBI | ATTAAT | 2 cut(s) | 1251, 1836 |
| Psp124BI | GAGCTC | 1 cut(s) | 966 |
| Psp6I | CCWGG | 6 cut(s) | 534, 1417, 1610, 1639, 1788, 1951 |
| PspEI | GGTNACC | 1 cut(s) | 562 |
| PspGI | CCWGG | 6 cut(s) | 534, 1417, 1610, 1639, 1788, 1951 |
| PspN4I | GGNNCC | 2 cut(s) | 1348, 1800 |
| PspPI | GGNCC | 1 cut(s) | 450 |
| PsuI | RGATCY | 4 cut(s) | 355, 1414, 1516, 1804 |
| RsaI | GTAC | 6 cut(s) | 769, 894, 1012, 1483, 1607, 1852 |
| RsaNI | GTAC | 6 cut(s) | 768, 893, 1011, 1482, 1606, 1851 |
| RseI | CAYNNNNRTG | 6 cut(s) | 105, 1251, 1319, 1334, 1355, 1505 |
| SacI | GAGCTC | 1 cut(s) | 966 |
| SaqAI | TTAA | 8 cut(s) | 468, 933, 1065, 1175, 1251, 1271, 1410, 1836 |
| SatI | GCNGC | 6 cut(s) | 6, 9, 414, 619, 1545, 1921 |
| Sau3AI | GATC | 7 cut(s) | 355, 737, 1414, 1516, 1768, 1804, 1978 |
| Sau96I | GGNCC | 1 cut(s) | 450 |
| SchI | GAGTC | 3 cut(s) | 464, 1772, 1825 |
| ScrFI | CCNGG | 7 cut(s) | 82, 536, 1419, 1612, 1641, 1790, 1953 |
| SduI | GDGCHC | 5 cut(s) | 387, 903, 966, 1465, 1632 |
| SfaNI | GCATC | 7 cut(s) | 653, 1347, 1551, 1556, 1773, 1894, 1938 |
| Sfr274I | CTCGAG | 1 cut(s) | 1826 |
| SfuI | TTCGAA | 2 cut(s) | 609, 1554 |
| SlaI | CTCGAG | 1 cut(s) | 1826 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 105, 1251, 1319, 1334, 1355, 1505 |
| SmlI | CTYRAG | 3 cut(s) | 896, 1732, 1826 |
| SmoI | CTYRAG | 3 cut(s) | 896, 1732, 1826 |
| SseBI | AGGCCT | 1 cut(s) | 1754 |
| SsiI | CCGC | 3 cut(s) | 299, 1077, 1298 |
| SspMI | CTAG | 1 cut(s) | 1580 |
| SstI | GAGCTC | 1 cut(s) | 966 |
| StuI | AGGCCT | 1 cut(s) | 1754 |
| StyD4I | CCNGG | 7 cut(s) | 80, 534, 1417, 1610, 1639, 1788, 1951 |
| StyI | CCWWGG | 1 cut(s) | 853 |
| TaaI | ACNGT | 5 cut(s) | 327, 475, 593, 656, 905 |
| TaiI | ACGT | 2 cut(s) | 948, 1539 |
| TaqII | GACCGA | 1 cut(s) | 205 |
| TatI | WGTACW | 3 cut(s) | 767, 1010, 1850 |
| TfiI | GAWTC | 2 cut(s) | 311, 864 |
| Tru1I | TTAA | 8 cut(s) | 468, 933, 1065, 1175, 1251, 1271, 1410, 1836 |
| Tru9I | TTAA | 8 cut(s) | 468, 933, 1065, 1175, 1251, 1271, 1410, 1836 |
| TscAI | CASTG | 2 cut(s) | 205, 1470 |
| TseFI | GTSAC | 3 cut(s) | 562, 1232, 1775 |
| TseI | GCWGC | 6 cut(s) | 5, 8, 413, 618, 1544, 1920 |
| Tsp45I | GTSAC | 3 cut(s) | 562, 1232, 1775 |
| TspDTI | ATGAA | 9 cut(s) | 183, 279, 422, 693, 966, 1416, 1523, 1703, 1863 |
| TspGWI | ACGGA | 2 cut(s) | 1324, 1529 |
| TspRI | CASTG | 2 cut(s) | 205, 1470 |
| VneI | GTGCAC | 2 cut(s) | 1461, 1628 |
| VspI | ATTAAT | 2 cut(s) | 1251, 1836 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1793 |
| XapI | RAATTY | 4 cut(s) | 818, 1139, 1266, 1935 |
| XceI | RCATGY | 1 cut(s) | 50 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1498, 1647 |
| XhoI | CTCGAG | 1 cut(s) | 1826 |
| XmiI | GTMKAC | 1 cut(s) | 86 |
| XmnI | GAANNNNTTC | 2 cut(s) | 684, 1392 |
| XspI | CTAG | 1 cut(s) | 1580 |
| Zsp2I | ATGCAT | 2 cut(s) | 1362, 1566 |