Disease resistance protein (TIR-NBS-LRR class)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Beta-prop_WDR3_2nd | PF25172 | 1 - 277 | 4.7e-104 | WDR3 second beta-propeller domain |
| WD40_Gbeta | PF25391 | 2 - 187 | 3e-10 | G protein beta WD-40 repeat protein |
| Beta-prop_WDR3_1st | PF25173 | 3 - 99 | 3.8e-06 | WDR3 first beta-propeller domain |
| Beta-prop_THOC3 | PF25174 | 3 - 196 | 7.2e-21 | THOC3 beta-propeller domain |
| Beta-prop_WDR5 | PF25175 | 4 - 136 | 2.6e-07 | WDR5 beta-propeller domain |
| WD40_CDC20-Fz | PF24807 | 5 - 271 | 4.3e-23 | CDC20/Fizzy WD40 domain |
| WD40_Prp19 | PF24814 | 35 - 214 | 4.4e-17 | Prp19 WD40 domain |
| Beta-prop_WDR36-Utp21_2nd | PF25168 | 62 - 219 | 1.3e-08 | WDR36/Utp21 second beta-propeller domain |
| Beta-prop_TEP1_2nd | PF25047 | 71 - 273 | 4e-16 | TEP-1 second beta-propeller |
| Beta-prop_EML_2 | PF23414 | 75 - 235 | 1.7e-15 | Echinoderm microtubule-associated protein second beta-propeller |
| WD40_MABP1-WDR62_2nd | PF24782 | 112 - 269 | 5.2e-10 | MABP1/WDR62 second WD40 domain |
| WD40_WDHD1_1st | PF24817 | 116 - 274 | 4e-17 | WDHD1 first WD40 domain |
| Beta-prop_WDR36-Utp21_1st | PF25171 | 117 - 230 | 2.1e-07 | WDR36/Utp21 first beta-propeller |
| Beta-prop_WDR3_1st | PF25173 | 117 - 272 | 9.3e-29 | WDR3 first beta-propeller domain |
| Beta-prop_WDR5 | PF25175 | 120 - 273 | 2.2e-28 | WDR5 beta-propeller domain |
| WD40_Gbeta | PF25391 | 137 - 219 | 8e-06 | G protein beta WD-40 repeat protein |
| EIF3I | PF24805 | 137 - 212 | 2e-08 | EIF3I |
| WD40 | PF00400 | 152 - 187 | 1.5e-09 | WD domain, G-beta repeat |
| Beta-prop_WDR36-Utp21_2nd | PF25168 | 159 - 272 | 6.3e-07 | WDR36/Utp21 second beta-propeller domain |
| WD40_MABP1-WDR62_1st | PF24780 | 162 - 271 | 2.2e-08 | MABP1/WDR62 first WD40 domain |
| WD40_Prp19 | PF24814 | 163 - 272 | 5.9e-18 | Prp19 WD40 domain |
| WDR55 | PF24796 | 198 - 273 | 8.9e-06 | WDR55 |
| EIF3I | PF24805 | 201 - 272 | 7.7e-08 | EIF3I |
| Beta-prop_THOC3 | PF25174 | 201 - 272 | 2e-09 | THOC3 beta-propeller domain |
| WD40 | PF00400 | 235 - 272 | 4.3e-08 | WD domain, G-beta repeat |
| Utp12 | PF04003 | 352 - 443 | 1.8e-17 | Dip2/Utp12 Family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 649, 1207 |
| AccI | GTMKAC | 1 cut(s) | 432 |
| AciI | CCGC | 1 cut(s) | 899 |
| AclI | AACGTT | 1 cut(s) | 871 |
| AclWI | GGATC | 5 cut(s) | 133, 541, 793, 822, 1319 |
| AcsI | RAATTY | 4 cut(s) | 626, 698, 909, 1240 |
| AcuI | CTGAAG | 1 cut(s) | 39 |
| AfaI | GTAC | 1 cut(s) | 43 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 44, 649, 920, 1207 |
| AgeI | ACCGGT | 1 cut(s) | 44 |
| AgsI | TTSAA | 2 cut(s) | 209, 1050 |
| AhlI | ACTAGT | 1 cut(s) | 8 |
| AjnI | CCWGG | 1 cut(s) | 1149 |
| AluBI | AGCT | 7 cut(s) | 28, 191, 448, 886, 926, 995, 1103 |
| AluI | AGCT | 7 cut(s) | 28, 191, 448, 886, 926, 995, 1103 |
| Alw21I | GWGCWC | 1 cut(s) | 888 |
| Alw26I | GTCTC | 2 cut(s) | 306, 1247 |
| AlwI | GGATC | 5 cut(s) | 133, 541, 793, 822, 1319 |
| AoxI | GGCC | 1 cut(s) | 930 |
| ApeKI | GCWGC | 3 cut(s) | 481, 896, 995 |
| ApoI | RAATTY | 4 cut(s) | 626, 698, 909, 1240 |
| AseI | ATTAAT | 1 cut(s) | 978 |
| AsiGI | ACCGGT | 1 cut(s) | 44 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 909 |
| AspS9I | GGNCC | 1 cut(s) | 1129 |
| AsuC2I | CCSGG | 3 cut(s) | 160, 1266, 1309 |
| AsuHPI | GGTGA | 3 cut(s) | 94, 340, 779 |
| AvaII | GGWCC | 1 cut(s) | 1129 |
| BaeI | ACNNNNGTAYC | 3 cut(s) | 39, 348, 381 |
| BanII | GRGCYC | 1 cut(s) | 888 |
| Bbv12I | GWGCWC | 1 cut(s) | 888 |
| BbvI | GCAGC | 3 cut(s) | 468, 908, 982 |
| BccI | CCATC | 2 cut(s) | 254, 506 |
| BciT130I | CCWGG | 1 cut(s) | 1151 |
| BciVI | GTATCC | 1 cut(s) | 349 |
| BclI | TGATCA | 1 cut(s) | 1027 |
| BcnI | CCSGG | 3 cut(s) | 160, 1266, 1309 |
| BcoDI | GTCTC | 2 cut(s) | 306, 1247 |
| BcuI | ACTAGT | 1 cut(s) | 8 |
| BfaI | CTAG | 4 cut(s) | 9, 39, 986, 1370 |
| BfuI | GTATCC | 1 cut(s) | 349 |
| BglII | AGATCT | 2 cut(s) | 517, 1022 |
| BisI | GCNGC | 3 cut(s) | 482, 897, 996 |
| BlsI | GCNGC | 3 cut(s) | 483, 898, 997 |
| Bme1390I | CCNGG | 4 cut(s) | 160, 1151, 1266, 1309 |
| Bme18I | GGWCC | 1 cut(s) | 1129 |
| BmgT120I | GGNCC | 1 cut(s) | 1129 |
| BmrFI | CCNGG | 4 cut(s) | 160, 1151, 1266, 1309 |
| BmrI | ACTGGG | 1 cut(s) | 694 |
| BmsI | GCATC | 4 cut(s) | 379, 679, 1182, 1363 |
| BmuI | ACTGGG | 1 cut(s) | 694 |
| BpmI | CTGGAG | 1 cut(s) | 1088 |
| BpuEI | CTTGAG | 4 cut(s) | 162, 522, 872, 1343 |
| BpuMI | CCSGG | 3 cut(s) | 160, 1266, 1309 |
| Bsa29I | ATCGAT | 2 cut(s) | 796, 800 |
| BsaAI | YACGTR | 1 cut(s) | 649 |
| BsaBI | GATNNNNATC | 1 cut(s) | 516 |
| BsaJI | CCNNGG | 1 cut(s) | 763 |
| BsaWI | WCCGGW | 1 cut(s) | 44 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 44, 649, 920, 1207 |
| Bse118I | RCCGGY | 1 cut(s) | 44 |
| Bse1I | ACTGG | 3 cut(s) | 535, 689, 1204 |
| Bse8I | GATNNNNATC | 1 cut(s) | 516 |
| BseBI | CCWGG | 1 cut(s) | 1151 |
| BseCI | ATCGAT | 2 cut(s) | 796, 800 |
| BseDI | CCNNGG | 1 cut(s) | 763 |
| BseGI | GGATG | 3 cut(s) | 265, 505, 694 |
| BseJI | GATNNNNATC | 1 cut(s) | 516 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 44, 649, 920, 1207 |
| BseMII | CTCAG | 2 cut(s) | 873, 906 |
| BseNI | ACTGG | 3 cut(s) | 535, 689, 1204 |
| BseXI | GCAGC | 3 cut(s) | 468, 908, 982 |
| BseYI | CCCAGC | 1 cut(s) | 810 |
| Bsh1285I | CGRYCG | 1 cut(s) | 800 |
| BshFI | GGCC | 1 cut(s) | 932 |
| BshTI | ACCGGT | 1 cut(s) | 44 |
| BshVI | ATCGAT | 2 cut(s) | 796, 800 |
| BsiEI | CGRYCG | 1 cut(s) | 800 |
| BsiHKAI | GWGCWC | 1 cut(s) | 888 |
| BsiSI | CCGG | 4 cut(s) | 45, 159, 1266, 1308 |
| BslFI | GGGAC | 1 cut(s) | 738 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 44, 649, 920, 1207 |
| BsmAI | GTCTC | 2 cut(s) | 306, 1247 |
| BsmFI | GGGAC | 1 cut(s) | 738 |
| BsmI | GAATGC | 1 cut(s) | 169 |
| BsnI | GGCC | 1 cut(s) | 932 |
| Bsp1286I | GDGCHC | 1 cut(s) | 888 |
| BspACI | CCGC | 1 cut(s) | 899 |
| BspANI | GGCC | 1 cut(s) | 932 |
| BspCNI | CTCAG | 2 cut(s) | 874, 907 |
| BspDI | ATCGAT | 2 cut(s) | 796, 800 |
| BspHI | TCATGA | 1 cut(s) | 1410 |
| BspPI | GGATC | 5 cut(s) | 133, 541, 793, 822, 1319 |
| BspQI | GCTCTTC | 1 cut(s) | 1377 |
| BsrFI | RCCGGY | 1 cut(s) | 44 |
| BsrI | ACTGG | 3 cut(s) | 535, 689, 1204 |
| BssAI | RCCGGY | 1 cut(s) | 44 |
| BssECI | CCNNGG | 1 cut(s) | 763 |
| BssNAI | GTATAC | 1 cut(s) | 433 |
| BssT1I | CCWWGG | 1 cut(s) | 763 |
| Bst1107I | GTATAC | 1 cut(s) | 433 |
| Bst2UI | CCWGG | 1 cut(s) | 1151 |
| Bst4CI | ACNGT | 3 cut(s) | 172, 424, 1083 |
| Bst6I | CTCTTC | 2 cut(s) | 840, 1377 |
| BstBAI | YACGTR | 1 cut(s) | 649 |
| BstC8I | GCNNGC | 2 cut(s) | 894, 1221 |
| BstDEI | CTNAG | 5 cut(s) | 129, 315, 882, 915, 934 |
| BstF5I | GGATG | 3 cut(s) | 265, 505, 694 |
| BstMAI | GTCTC | 2 cut(s) | 306, 1247 |
| BstMCI | CGRYCG | 1 cut(s) | 800 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 487 |
| BstNI | CCWGG | 1 cut(s) | 1151 |
| BstNSI | RCATGY | 1 cut(s) | 896 |
| BstSCI | CCNGG | 4 cut(s) | 158, 1149, 1264, 1307 |
| BstV1I | GCAGC | 3 cut(s) | 468, 908, 982 |
| BstX2I | RGATCY | 5 cut(s) | 125, 517, 533, 785, 1022 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 352 |
| BstYI | RGATCY | 5 cut(s) | 125, 517, 533, 785, 1022 |
| BstZ17I | GTATAC | 1 cut(s) | 433 |
| Bsu15I | ATCGAT | 2 cut(s) | 796, 800 |
| BsuI | GTATCC | 1 cut(s) | 349 |
| BsuRI | GGCC | 1 cut(s) | 932 |
| BsuTUI | ATCGAT | 2 cut(s) | 796, 800 |
| BtsCI | GGATG | 3 cut(s) | 265, 505, 694 |
| BtsI | GCAGTG | 1 cut(s) | 616 |
| BtsIMutI | CAGTG | 2 cut(s) | 168, 616 |
| Cac8I | GCNNGC | 2 cut(s) | 894, 1221 |
| CciI | TCATGA | 1 cut(s) | 1410 |
| Cfr10I | RCCGGY | 1 cut(s) | 44 |
| Cfr13I | GGNCC | 1 cut(s) | 1129 |
| ClaI | ATCGAT | 2 cut(s) | 796, 800 |
| Csp6I | GTAC | 1 cut(s) | 42 |
| CspAI | ACCGGT | 1 cut(s) | 44 |
| CviAII | CATG | 6 cut(s) | 194, 346, 731, 893, 1031, 1411 |
| CviQI | GTAC | 1 cut(s) | 42 |
| DdeI | CTNAG | 5 cut(s) | 129, 315, 882, 915, 934 |
| Eam1104I | CTCTTC | 2 cut(s) | 840, 1377 |
| EarI | CTCTTC | 2 cut(s) | 840, 1377 |
| Ecl136II | GAGCTC | 1 cut(s) | 886 |
| Eco130I | CCWWGG | 1 cut(s) | 763 |
| Eco24I | GRGCYC | 1 cut(s) | 888 |
| Eco47I | GGWCC | 1 cut(s) | 1129 |
| Eco53kI | GAGCTC | 1 cut(s) | 886 |
| Eco57I | CTGAAG | 1 cut(s) | 39 |
| EcoICRI | GAGCTC | 1 cut(s) | 886 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1129 |
| EcoRII | CCWGG | 1 cut(s) | 1149 |
| EcoT14I | CCWWGG | 1 cut(s) | 763 |
| EcoT22I | ATGCAT | 1 cut(s) | 1197 |
| EcoT38I | GRGCYC | 1 cut(s) | 888 |
| ErhI | CCWWGG | 1 cut(s) | 763 |
| FaeI | CATG | 6 cut(s) | 197, 349, 734, 896, 1034, 1414 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 12, 44, 1242, 1274 |
| FaqI | GGGAC | 1 cut(s) | 738 |
| FatI | CATG | 6 cut(s) | 193, 345, 730, 892, 1030, 1410 |
| FbaI | TGATCA | 1 cut(s) | 1027 |
| FblI | GTMKAC | 1 cut(s) | 432 |
| Fnu4HI | GCNGC | 3 cut(s) | 482, 897, 996 |
| FokI | GGATG | 3 cut(s) | 272, 512, 701 |
| FriOI | GRGCYC | 1 cut(s) | 888 |
| Fsp4HI | GCNGC | 3 cut(s) | 482, 897, 996 |
| FspBI | CTAG | 4 cut(s) | 9, 39, 986, 1370 |
| GluI | GCNGC | 3 cut(s) | 482, 897, 996 |
| GsaI | CCCAGC | 1 cut(s) | 814 |
| GsuI | CTGGAG | 1 cut(s) | 1088 |
| HaeIII | GGCC | 1 cut(s) | 932 |
| HapII | CCGG | 4 cut(s) | 45, 159, 1266, 1308 |
| Hin1II | CATG | 6 cut(s) | 197, 349, 734, 896, 1034, 1414 |
| HincII | GTYRAC | 1 cut(s) | 6 |
| HindII | GTYRAC | 1 cut(s) | 6 |
| HindIII | AAGCTT | 1 cut(s) | 1101 |
| HinfI | GANTC | 8 cut(s) | 34, 311, 416, 850, 878, 1255, 1337, 1407 |
| HpaII | CCGG | 4 cut(s) | 45, 159, 1266, 1308 |
| HphI | GGTGA | 3 cut(s) | 94, 340, 779 |
| Hpy166II | GTNNAC | 3 cut(s) | 6, 433, 679 |
| Hpy188I | TCNGA | 8 cut(s) | 511, 522, 855, 883, 963, 1027, 1248, 1406 |
| Hpy188III | TCNNGA | 9 cut(s) | 539, 914, 1020, 1067, 1145, 1189, 1341, 1370, 1411 |
| Hpy8I | GTNNAC | 3 cut(s) | 6, 433, 679 |
| Hpy99I | CGWCG | 1 cut(s) | 810 |
| HpyAV | CCTTC | 3 cut(s) | 65, 107, 913 |
| HpyCH4III | ACNGT | 3 cut(s) | 172, 424, 1083 |
| HpyCH4IV | ACGT | 4 cut(s) | 363, 648, 805, 871 |
| HpyCH4V | TGCA | 6 cut(s) | 116, 896, 983, 1043, 1195, 1376 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 487 |
| HpyF3I | CTNAG | 5 cut(s) | 129, 315, 882, 915, 934 |
| HpySE526I | ACGT | 4 cut(s) | 363, 648, 805, 871 |
| Hsp92II | CATG | 6 cut(s) | 197, 349, 734, 896, 1034, 1414 |
| Ksp22I | TGATCA | 1 cut(s) | 1027 |
| LguI | GCTCTTC | 1 cut(s) | 1377 |
| LmnI | GCTCC | 2 cut(s) | 606, 923 |
| Lsp1109I | GCAGC | 3 cut(s) | 468, 908, 982 |
| LweI | GCATC | 4 cut(s) | 379, 679, 1182, 1363 |
| MaeI | CTAG | 4 cut(s) | 9, 39, 986, 1370 |
| MaeII | ACGT | 4 cut(s) | 363, 648, 805, 871 |
| MboII | GAAGA | 4 cut(s) | 857, 914, 917, 1394 |
| MfeI | CAATTG | 1 cut(s) | 954 |
| MflI | RGATCY | 5 cut(s) | 125, 517, 533, 785, 1022 |
| MhlI | GDGCHC | 1 cut(s) | 888 |
| MluCI | AATT | 6 cut(s) | 626, 698, 909, 954, 1224, 1240 |
| MlyI | GAGTC | 4 cut(s) | 410, 887, 1249, 1401 |
| MmeI | TCCRAC | 2 cut(s) | 103, 1314 |
| MnlI | CCTC | 9 cut(s) | 715, 727, 758, 835, 1000, 1101, 1120, 1313, 1377 |
| Mph1103I | ATGCAT | 1 cut(s) | 1197 |
| MroXI | GAANNNNTTC | 1 cut(s) | 909 |
| MslI | CAYNNNNRTG | 2 cut(s) | 350, 735 |
| MspA1I | CMGCKG | 1 cut(s) | 899 |
| MspI | CCGG | 4 cut(s) | 45, 159, 1266, 1308 |
| MspR9I | CCNGG | 4 cut(s) | 160, 1151, 1266, 1309 |
| MunI | CAATTG | 1 cut(s) | 954 |
| Mva1269I | GAATGC | 1 cut(s) | 169 |
| MvaI | CCWGG | 1 cut(s) | 1151 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 487 |
| NciI | CCSGG | 3 cut(s) | 160, 1266, 1309 |
| NlaIII | CATG | 6 cut(s) | 197, 349, 734, 896, 1034, 1414 |
| NmuCI | GTSAC | 6 cut(s) | 172, 244, 328, 526, 778, 1316 |
| NsiI | ATGCAT | 1 cut(s) | 1197 |
| NspI | RCATGY | 1 cut(s) | 896 |
| PaeI | GCATGC | 1 cut(s) | 896 |
| PagI | TCATGA | 1 cut(s) | 1410 |
| PciSI | GCTCTTC | 1 cut(s) | 1377 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 802, 814 |
| PctI | GAATGC | 1 cut(s) | 169 |
| PdmI | GAANNNNTTC | 1 cut(s) | 909 |
| PfeI | GAWTC | 4 cut(s) | 34, 311, 850, 1337 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 649, 1207 |
| PfoI | TCCNGGA | 1 cut(s) | 1264 |
| PinAI | ACCGGT | 1 cut(s) | 44 |
| PkrI | GCNGC | 3 cut(s) | 483, 898, 997 |
| Ple19I | CGATCG | 1 cut(s) | 800 |
| PleI | GAGTC | 4 cut(s) | 410, 886, 1249, 1401 |
| PpsI | GAGTC | 4 cut(s) | 410, 886, 1249, 1401 |
| Ppu21I | YACGTR | 1 cut(s) | 649 |
| PpuMI | RGGWCCY | 1 cut(s) | 1129 |
| PshBI | ATTAAT | 1 cut(s) | 978 |
| Psp124BI | GAGCTC | 1 cut(s) | 888 |
| Psp1406I | AACGTT | 1 cut(s) | 871 |
| Psp5II | RGGWCCY | 1 cut(s) | 1129 |
| Psp6I | CCWGG | 1 cut(s) | 1149 |
| PspFI | CCCAGC | 1 cut(s) | 810 |
| PspGI | CCWGG | 1 cut(s) | 1149 |
| PspPI | GGNCC | 1 cut(s) | 1129 |
| PspPPI | RGGWCCY | 1 cut(s) | 1129 |
| PsuI | RGATCY | 5 cut(s) | 125, 517, 533, 785, 1022 |
| PvuI | CGATCG | 1 cut(s) | 800 |
| RsaI | GTAC | 1 cut(s) | 43 |
| RsaNI | GTAC | 1 cut(s) | 42 |
| RseI | CAYNNNNRTG | 2 cut(s) | 350, 735 |
| SacI | GAGCTC | 1 cut(s) | 888 |
| SapI | GCTCTTC | 1 cut(s) | 1377 |
| SatI | GCNGC | 3 cut(s) | 482, 897, 996 |
| Sau96I | GGNCC | 1 cut(s) | 1129 |
| SchI | GAGTC | 4 cut(s) | 410, 887, 1249, 1401 |
| ScrFI | CCNGG | 4 cut(s) | 160, 1151, 1266, 1309 |
| SduI | GDGCHC | 1 cut(s) | 888 |
| SfaNI | GCATC | 4 cut(s) | 379, 679, 1182, 1363 |
| SinI | GGWCC | 1 cut(s) | 1129 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 350, 735 |
| SmlI | CTYRAG | 4 cut(s) | 177, 537, 887, 1358 |
| SmoI | CTYRAG | 4 cut(s) | 177, 537, 887, 1358 |
| SpeI | ACTAGT | 1 cut(s) | 8 |
| SphI | GCATGC | 1 cut(s) | 896 |
| Sse9I | AATT | 6 cut(s) | 626, 698, 909, 954, 1224, 1240 |
| SsiI | CCGC | 1 cut(s) | 899 |
| SspMI | CTAG | 4 cut(s) | 9, 39, 986, 1370 |
| SstI | GAGCTC | 1 cut(s) | 888 |
| StyD4I | CCNGG | 4 cut(s) | 158, 1149, 1264, 1307 |
| StyI | CCWWGG | 1 cut(s) | 763 |
| TaaI | ACNGT | 3 cut(s) | 172, 424, 1083 |
| TaiI | ACGT | 4 cut(s) | 366, 651, 808, 874 |
| TaqI | TCGA | 4 cut(s) | 24, 796, 800, 1340 |
| TasI | AATT | 6 cut(s) | 626, 698, 909, 954, 1224, 1240 |
| TfiI | GAWTC | 4 cut(s) | 34, 311, 850, 1337 |
| TscAI | CASTG | 2 cut(s) | 175, 616 |
| TseFI | GTSAC | 6 cut(s) | 172, 244, 328, 526, 778, 1316 |
| TseI | GCWGC | 3 cut(s) | 481, 896, 995 |
| Tsp45I | GTSAC | 6 cut(s) | 172, 244, 328, 526, 778, 1316 |
| TspDTI | ATGAA | 7 cut(s) | 47, 246, 300, 362, 590, 984, 1128 |
| TspRI | CASTG | 2 cut(s) | 175, 616 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 649, 1207 |
| VpaK11BI | GGWCC | 1 cut(s) | 1129 |
| VspI | ATTAAT | 1 cut(s) | 978 |
| XapI | RAATTY | 4 cut(s) | 626, 698, 909, 1240 |
| XbaI | TCTAGA | 1 cut(s) | 1369 |
| XceI | RCATGY | 1 cut(s) | 896 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 400 |
| XmiI | GTMKAC | 1 cut(s) | 432 |
| XmnI | GAANNNNTTC | 1 cut(s) | 909 |
| XspI | CTAG | 4 cut(s) | 9, 39, 986, 1370 |
| Zsp2I | ATGCAT | 1 cut(s) | 1197 |