RLG00000032901

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
20605356 .. 20610154
4799 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032901

Sequence Viewer

Length: 2088 bp
ATGGCTGCTGCTTCTTCTTCTTCTGATATCATCCCTCGGGAGAAGTATGATGTATTTCTTAGTTTCAGAGGCGGGGACACCCGGGATACTTTTACCAGCCATCTTTATGAGGCTTTACGTCAGAAAAAAATCCAAACTTTCAAAGATGATGAGGAAATGCAGAGAGGAGATGATATCTCACCTGCCCTTCTCAAAGCAATCAGCGAATCGAAGCTCTCGGTTATCATTTTCTCCAAAGACTACGCTTCTTCCAAATGGTGTTTGGATGAACTTGTGCACATACTCCGATGCAGAGGTGAACAGTTTGTTATACCCATCTTCTACGGCATAGATCCATCAGATGTACGCAAACAATCGGGGAGTTATGCGGATGCATTTGTTAAACATGAGGAACATTTCGAGGACACGATGGACAAGGTGCTCAGGTGGAGACATGCTTTGACAACAGCAGCCAATATATCTGGGTTTGATTCCGAAAAAATTAGACCCGATTCGGCTTTAGTTAAGAGGGTGGTCAATGACATTTTGGTGAAATTGGATGGCAAATCGCAAAACGCAGGTGGTTTGGAGCGCTGGGTTGGAATGGACAGACACATAATTCAACTTGTTGAGTTATTATGCCTCAACTCACGGGACGTCCACATTGTAGGCATTTGGGGTATGGGTGGTATCGGTGATTACACAACTTTTGCAAAACAGGTGGTAGATTATGTTGGGGGCAATCCATTGGCTCTTACAACCTTGGGCTCCGTATTCTCTCATTGCTGGAGCAAAGAAGACTGGGAAGGTGAATTAGAAAAAGTGAAAAAAATTCCCAACCGAAATATCCAAAAGGTATTGAGGTTGAGTTATGATAGATTAGAAGAAAATGAGCAGGATATATTTCTCGATATTGCATGTTACTATAAAGGAGAGGATATAGATTATACAGAAAGAATGTTAGATGCCTCTGGTTTCTGTGCGAATGCAGGGATCAGACTTCTCATTGATATGTCTCTCATATCCGTGGATAAATGTTCAAGATTCATTAAGATGCATGATTTGATACAAGAAATGGGTCATAAAATTATTCGTGATCAAGATGCTAAGAATCCCGGAAAACGCAGTAGATTGTGGATTGCAGATGATGTTTGTCGTGTACTGAAAGAAAATAGGGGAACCGAAGCAATTGAATGCTTAGGCATGAGCATGGACCACATTTCAGATCTTGACATAAAACCTTCAGCCTTCAAAAAGATGGATAATCTAAGATTACTTAAGTTACAGTTTCAGCGTTACTCTTACTGGGACTCGAAGTCATGGATCAATCTTGGAAGCTTAAAACGCATCTATCTTCGTCTGTCCAAGCACCTGGCTGAGGTTCCAGATCTCTCTGAGAGTCCAAAACTCGAGAGCATTGATCTTGAACGTTGTACAAGTTTGGTTCAACTTCCTTCATCTTTTCAGCATCTTTCCAAGCTTTCTTGGCTCAGTCTGGATGACTGCTCCAATCTCAAAATTCTCCCAGAGATGCCAGGCAATCTGGAAAGTGCACGGAGCAACATAATGGCTGATGCACAGCTTAGAGTTATGCGATGTGTACGTCCCCTCGGTGAATGGAGTACGATTAAAGTCGCTTGTCCGGGAAATGAAATTCCAAAGTGGATGAGGTATCGAAGGAAGGGACGTAAGATAAATATCAAGCTTCCTCCTCATTCGTTTCGTCAAGGCTTCCTCGGTTACGCTCTATGCATTGTGGTTGCATTCAACAACTATACGCCGCCACCCATTAATATTGGACCTACCTACTTTAGTTGTGGAACCCATCACAAAACTAACAATGGTCACAAAGATCGGTGCGACCTTGATATACGCCCACCAGATGATATAATTCTCAATTCAGATCATTGGTTCCTTTGGTATTTCTGCCCTAATTTTGTTCGATTTGGAAGCACAATCAATCGTGAGGATTGGGTAAAAGCATCCGAGGCCTCTTTTAACTTCATGTTGTACCAAGATACCGAGGCTGTGAAGGAGCTATATGATAAAATGCTGAAATCTGGAATGCTAAATGATGTAAAGGGGAATGACACTTTTAGAGGGGAATGA

Protein Analysis

696

Amino Acids

79.72

Weight (kDa)

6.82

Isoelectric Point (pI)

45.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 15 - 185 3.4e-57 TIR domain
TIR_2 PF13676 18 - 135 4.7e-15 TIR domain
WHD_ROQ1 PF23282 288 - 360 5.1e-23 Disease resistance protein Roq1-like, winged-helix domain
C-JID PF20160 540 - 658 1e-13 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 190, 548
AatII GACGTC 1 cut(s) 639
Acc36I ACCTGC 2 cut(s) 190, 548
AciI CCGC 3 cut(s) 72, 368, 1760
AclI AACGTT 1 cut(s) 1408
AclWI GGATC 3 cut(s) 326, 980, 1310
AcsI RAATTY 3 cut(s) 810, 1497, 1632
AcuI CTGAAG 1 cut(s) 1206
AcyI GRCGYC 1 cut(s) 636
AfaI GTAC 6 cut(s) 345, 1140, 1414, 1581, 1603, 1991
AfeI AGCGCT 1 cut(s) 572
AfiI CCNNNNNNNGG 1 cut(s) 1357
AflII CTTAAG 1 cut(s) 1256
AgsI TTSAA 8 cut(s) 142, 602, 1020, 1172, 1231, 1406, 1427, 1747
AhdI GACNNNNNGTC 1 cut(s) 1294
AjnI CCWGG 2 cut(s) 1350, 1513
AluBI AGCT 6 cut(s) 214, 1317, 1459, 1561, 1684, 2017
AluI AGCT 6 cut(s) 214, 1317, 1459, 1561, 1684, 2017
Alw21I GWGCWC 3 cut(s) 279, 423, 1534
Alw26I GTCTC 2 cut(s) 424, 999
Alw44I GTGCAC 2 cut(s) 275, 1530
AlwI GGATC 3 cut(s) 326, 980, 1310
Ama87I CYCGRG 3 cut(s) 36, 81, 1388
Aor51HI AGCGCT 1 cut(s) 572
AoxI GGCC 1 cut(s) 1968
ApaLI GTGCAC 2 cut(s) 275, 1530
ApeKI GCWGC 3 cut(s) 5, 8, 449
ApoI RAATTY 3 cut(s) 810, 1497, 1632
AseI ATTAAT 1 cut(s) 1770
AspLEI GCGC 1 cut(s) 573
AspS9I GGNCC 2 cut(s) 1192, 1778
AsuC2I CCSGG 4 cut(s) 82, 83, 1095, 1623
AsuHPI GGTGA 6 cut(s) 171, 308, 541, 686, 800, 1604
AvaI CYCGRG 3 cut(s) 36, 81, 1388
AvaII GGWCC 2 cut(s) 1192, 1778
BaeGI GKGCMC 2 cut(s) 279, 1534
BanII GRGCYC 1 cut(s) 749
BbsI GAAGAC 1 cut(s) 783
Bbv12I GWGCWC 3 cut(s) 279, 423, 1534
BbvCI CCTCAGC 1 cut(s) 1356
BbvI GCAGC 1 cut(s) 461
BccI CCATC 7 cut(s) 108, 323, 343, 403, 533, 1231, 1812
BceAI ACGGC 1 cut(s) 340
BciT130I CCWGG 2 cut(s) 1352, 1515
BciVI GTATCC 1 cut(s) 79
BclI TGATCA 1 cut(s) 1075
BcnI CCSGG 4 cut(s) 82, 83, 1095, 1623
BcoDI GTCTC 2 cut(s) 424, 999
BfoI RGCGCY 1 cut(s) 574
BfrI CTTAAG 1 cut(s) 1256
BfuAI ACCTGC 2 cut(s) 190, 548
BfuI GTATCC 1 cut(s) 79
BglII AGATCT 2 cut(s) 1204, 1366
BisI GCNGC 4 cut(s) 6, 9, 450, 1760
BlsI GCNGC 4 cut(s) 7, 10, 451, 1761
Bme1390I CCNGG 6 cut(s) 82, 83, 1095, 1352, 1515, 1623
Bme18I GGWCC 2 cut(s) 1192, 1778
BmeRI GACNNNNNGTC 1 cut(s) 1294
BmeT110I CYCGRG 3 cut(s) 36, 81, 1388
BmgT120I GGNCC 2 cut(s) 1192, 1778
BmiI GGNNCC 5 cut(s) 748, 1159, 1362, 1801, 1892
BmrFI CCNGG 6 cut(s) 82, 83, 1095, 1352, 1515, 1623
BmrI ACTGGG 2 cut(s) 790, 1294
BmuI ACTGGG 2 cut(s) 790, 1294
BpiI GAAGAC 1 cut(s) 783
BpmI CTGGAG 1 cut(s) 787
Bpu10I CCTNAGC 3 cut(s) 422, 1177, 1356
BpuMI CCSGG 4 cut(s) 82, 83, 1095, 1623
BsaBI GATNNNNATC 1 cut(s) 1676
BsaHI GRCGYC 1 cut(s) 636
BsaJI CCNNGG 8 cut(s) 35, 81, 741, 1005, 1588, 1714, 1965, 2001
Bsc4I CCNNNNNNNGG 1 cut(s) 1357
Bse1I ACTGG 2 cut(s) 785, 1289
Bse3DI GCAATG 1 cut(s) 760
Bse8I GATNNNNATC 1 cut(s) 1676
BseBI CCWGG 2 cut(s) 1352, 1515
BseDI CCNNGG 8 cut(s) 35, 81, 741, 1005, 1588, 1714, 1965, 2001
BseGI GGATG 7 cut(s) 30, 271, 376, 544, 1483, 1650, 1961
BseJI GATNNNNATC 1 cut(s) 1676
BseLI CCNNNNNNNGG 1 cut(s) 1357
BseMI GCAATG 1 cut(s) 760
BseMII CTCAG 4 cut(s) 436, 1347, 1365, 1483
BseNI ACTGG 2 cut(s) 785, 1289
BseRI GAGGAG 2 cut(s) 180, 1680
BseSI GKGCMC 2 cut(s) 279, 1534
BseXI GCAGC 1 cut(s) 461
BseYI CCCAGC 1 cut(s) 573
BshFI GGCC 1 cut(s) 1970
BsiHKAI GWGCWC 3 cut(s) 279, 423, 1534
BsiHKCI CYCGRG 3 cut(s) 36, 81, 1388
BsiSI CCGG 3 cut(s) 82, 1095, 1622
BslFI GGGAC 5 cut(s) 89, 647, 1301, 1569, 1677
BslI CCNNNNNNNGG 1 cut(s) 1357
BsmAI GTCTC 2 cut(s) 424, 999
BsmFI GGGAC 5 cut(s) 89, 647, 1301, 1569, 1677
BsmI GAATGC 4 cut(s) 970, 1178, 1742, 2049
BsnI GGCC 1 cut(s) 1970
BsoBI CYCGRG 3 cut(s) 36, 81, 1388
Bsp1286I GDGCHC 4 cut(s) 279, 423, 749, 1534
Bsp1407I TGTACA 1 cut(s) 1412
Bsp143I GATC 9 cut(s) 331, 972, 1075, 1204, 1302, 1366, 1399, 1831, 1882
BspACI CCGC 3 cut(s) 72, 368, 1760
BspANI GGCC 1 cut(s) 1970
BspCNI CTCAG 4 cut(s) 435, 1348, 1366, 1482
BspLI GGNNCC 5 cut(s) 748, 1159, 1362, 1801, 1892
BspMI ACCTGC 2 cut(s) 190, 548
BspPI GGATC 3 cut(s) 326, 980, 1310
BspTI CTTAAG 1 cut(s) 1256
BsrDI GCAATG 1 cut(s) 760
BsrGI TGTACA 1 cut(s) 1412
BsrI ACTGG 2 cut(s) 785, 1289
BssECI CCNNGG 8 cut(s) 35, 81, 741, 1005, 1588, 1714, 1965, 2001
BssMI GATC 9 cut(s) 331, 972, 1075, 1204, 1302, 1366, 1399, 1831, 1882
BssNI GRCGYC 1 cut(s) 636
BssT1I CCWWGG 1 cut(s) 741
Bst2UI CCWGG 2 cut(s) 1352, 1515
Bst4CI ACNGT 2 cut(s) 303, 1266
BstACI GRCGYC 1 cut(s) 636
BstAFI CTTAAG 1 cut(s) 1256
BstAUI TGTACA 1 cut(s) 1412
BstDEI CTNAG 9 cut(s) 59, 422, 1086, 1177, 1247, 1356, 1374, 1469, 1562
BstDSI CCRYGG 1 cut(s) 1005
BstENI CCTNNNNNAGG 1 cut(s) 1355
BstF5I GGATG 7 cut(s) 30, 271, 376, 544, 1483, 1650, 1961
BstH2I RGCGCY 1 cut(s) 574
BstHHI GCGC 1 cut(s) 573
BstKTI GATC 9 cut(s) 334, 975, 1078, 1207, 1305, 1369, 1402, 1834, 1885
BstMAI GTCTC 2 cut(s) 424, 999
BstMBI GATC 9 cut(s) 331, 972, 1075, 1204, 1302, 1366, 1399, 1831, 1882
BstMWI GCNNNNNNNGC 3 cut(s) 1323, 1465, 1967
BstNI CCWGG 2 cut(s) 1352, 1515
BstNSI RCATGY 2 cut(s) 437, 900
BstSCI CCNGG 6 cut(s) 80, 81, 1093, 1350, 1513, 1621
BstSLI GKGCMC 2 cut(s) 279, 1534
BstV1I GCAGC 1 cut(s) 461
BstV2I GAAGAC 1 cut(s) 783
BstX2I RGATCY 3 cut(s) 331, 1204, 1366
BstXI CCANNNNNNTGG 1 cut(s) 1351
BstYI RGATCY 3 cut(s) 331, 1204, 1366
BsuI GTATCC 1 cut(s) 79
BsuRI GGCC 1 cut(s) 1970
BtgI CCRYGG 1 cut(s) 1005
BtgZI GCGATG 1 cut(s) 1588
BtsCI GGATG 7 cut(s) 30, 271, 376, 544, 1483, 1650, 1961
BveI ACCTGC 2 cut(s) 190, 548
CfoI GCGC 1 cut(s) 573
Cfr13I GGNCC 2 cut(s) 1192, 1778
Cfr9I CCCGGG 1 cut(s) 81
Csp6I GTAC 6 cut(s) 344, 1139, 1413, 1580, 1602, 1990
CspCI CAANNNNNGTGG 2 cut(s) 681, 716
CviAII CATG 8 cut(s) 386, 434, 897, 1037, 1183, 1189, 1299, 1984
CviQI GTAC 6 cut(s) 344, 1139, 1413, 1580, 1602, 1990
DdeI CTNAG 9 cut(s) 59, 422, 1086, 1177, 1247, 1356, 1374, 1469, 1562
DpnI GATC 9 cut(s) 333, 974, 1077, 1206, 1304, 1368, 1401, 1833, 1884
DpnII GATC 9 cut(s) 331, 972, 1075, 1204, 1302, 1366, 1399, 1831, 1882
DriI GACNNNNNGTC 1 cut(s) 1294
Eam1105I GACNNNNNGTC 1 cut(s) 1294
Eco130I CCWWGG 1 cut(s) 741
Eco147I AGGCCT 1 cut(s) 1970
Eco24I GRGCYC 1 cut(s) 749
Eco32I GATATC 2 cut(s) 28, 175
Eco47I GGWCC 2 cut(s) 1192, 1778
Eco47III AGCGCT 1 cut(s) 572
Eco57I CTGAAG 1 cut(s) 1206
Eco88I CYCGRG 3 cut(s) 36, 81, 1388
EcoNI CCTNNNNNAGG 1 cut(s) 1355
EcoRII CCWGG 2 cut(s) 1350, 1513
EcoRV GATATC 2 cut(s) 28, 175
EcoT14I CCWWGG 1 cut(s) 741
EcoT22I ATGCAT 3 cut(s) 376, 1038, 1733
EcoT38I GRGCYC 1 cut(s) 749
ErhI CCWWGG 1 cut(s) 741
FaeI CATG 8 cut(s) 389, 437, 900, 1040, 1186, 1192, 1302, 1987
FaqI GGGAC 5 cut(s) 89, 647, 1301, 1569, 1677
FatI CATG 8 cut(s) 385, 433, 896, 1036, 1182, 1188, 1298, 1983
FauI CCCGC 1 cut(s) 65
FbaI TGATCA 1 cut(s) 1075
Fnu4HI GCNGC 4 cut(s) 6, 9, 450, 1760
FokI GGATG 7 cut(s) 17, 278, 383, 551, 1490, 1657, 1948
FriOI GRGCYC 1 cut(s) 749
Fsp4HI GCNGC 4 cut(s) 6, 9, 450, 1760
GlaI GCGC 1 cut(s) 572
GluI GCNGC 4 cut(s) 6, 9, 450, 1760
GsaI CCCAGC 1 cut(s) 577
GsuI CTGGAG 1 cut(s) 787
HaeII RGCGCY 1 cut(s) 574
HaeIII GGCC 1 cut(s) 1970
HapII CCGG 3 cut(s) 82, 1095, 1622
HhaI GCGC 1 cut(s) 573
Hin1I GRCGYC 1 cut(s) 636
Hin1II CATG 8 cut(s) 389, 437, 900, 1040, 1186, 1192, 1302, 1987
Hin6I GCGC 1 cut(s) 571
HinP1I GCGC 1 cut(s) 571
HindIII AAGCTT 3 cut(s) 1315, 1457, 1682
HinfI GANTC 7 cut(s) 206, 470, 491, 1023, 1090, 1289, 1378
HpaII CCGG 3 cut(s) 82, 1095, 1622
HphI GGTGA 6 cut(s) 171, 308, 541, 686, 800, 1604
Hpy166II GTNNAC 6 cut(s) 277, 299, 640, 1139, 1532, 1580
Hpy8I GTNNAC 6 cut(s) 277, 299, 640, 1139, 1532, 1580
HpyAV CCTTC 8 cut(s) 197, 779, 1230, 1237, 1443, 1650, 1654, 2005
HpyCH4III ACNGT 2 cut(s) 303, 1266
HpyCH4IV ACGT 5 cut(s) 118, 636, 1408, 1582, 1666
HpyF10VI GCNNNNNNNGC 3 cut(s) 1323, 1465, 1967
HpyF3I CTNAG 9 cut(s) 59, 422, 1086, 1177, 1247, 1356, 1374, 1469, 1562
HpySE526I ACGT 5 cut(s) 118, 636, 1408, 1582, 1666
Hsp92I GRCGYC 1 cut(s) 636
Hsp92II CATG 8 cut(s) 389, 437, 900, 1040, 1186, 1192, 1302, 1987
HspAI GCGC 1 cut(s) 571
Ksp22I TGATCA 1 cut(s) 1075
Kzo9I GATC 9 cut(s) 331, 972, 1075, 1204, 1302, 1366, 1399, 1831, 1882
LmnI GCTCC 6 cut(s) 568, 752, 768, 1490, 1536, 2014
Lsp1109I GCAGC 1 cut(s) 461
MaeII ACGT 5 cut(s) 118, 636, 1408, 1582, 1666
MaeIII GTNAC 5 cut(s) 899, 1260, 1274, 1718, 1823
MalI GATC 9 cut(s) 333, 974, 1077, 1206, 1304, 1368, 1401, 1833, 1884
MboI GATC 9 cut(s) 331, 972, 1075, 1204, 1302, 1366, 1399, 1831, 1882
MboII GAAGA 8 cut(s) 6, 9, 12, 240, 310, 788, 875, 1325
MfeI CAATTG 1 cut(s) 1167
MflI RGATCY 3 cut(s) 331, 1204, 1366
MhlI GDGCHC 4 cut(s) 279, 423, 749, 1534
MlyI GAGTC 2 cut(s) 1283, 1387
MmeI TCCRAC 1 cut(s) 559
Mph1103I ATGCAT 3 cut(s) 376, 1038, 1733
MseI TTAA 8 cut(s) 381, 504, 1029, 1257, 1319, 1608, 1770, 1977
MslI CAYNNNNRTG 6 cut(s) 105, 527, 989, 1004, 1031, 1187
MspCI CTTAAG 1 cut(s) 1256
MspI CCGG 3 cut(s) 82, 1095, 1622
MspR9I CCNGG 6 cut(s) 82, 83, 1095, 1352, 1515, 1623
MunI CAATTG 1 cut(s) 1167
Mva1269I GAATGC 4 cut(s) 970, 1178, 1742, 2049
MvaI CCWGG 2 cut(s) 1352, 1515
MwoI GCNNNNNNNGC 3 cut(s) 1323, 1465, 1967
NciI CCSGG 4 cut(s) 82, 83, 1095, 1623
NdeII GATC 9 cut(s) 331, 972, 1075, 1204, 1302, 1366, 1399, 1831, 1882
NlaIII CATG 8 cut(s) 389, 437, 900, 1040, 1186, 1192, 1302, 1987
NlaIV GGNNCC 5 cut(s) 748, 1159, 1362, 1801, 1892
NmuCI GTSAC 1 cut(s) 1823
NsiI ATGCAT 3 cut(s) 376, 1038, 1733
NspI RCATGY 2 cut(s) 437, 900
PaeR7I CTCGAG 1 cut(s) 1388
PaqCI CACCTGC 2 cut(s) 190, 548
PceI AGGCCT 1 cut(s) 1970
PctI GAATGC 4 cut(s) 970, 1178, 1742, 2049
PfeI GAWTC 5 cut(s) 206, 470, 491, 1023, 1090
PfoI TCCNGGA 2 cut(s) 1093, 1621
PkrI GCNGC 4 cut(s) 7, 10, 451, 1761
PleI GAGTC 2 cut(s) 1283, 1386
PpsI GAGTC 2 cut(s) 1283, 1386
PshBI ATTAAT 1 cut(s) 1770
Psp1406I AACGTT 1 cut(s) 1408
Psp6I CCWGG 2 cut(s) 1350, 1513
PspFI CCCAGC 1 cut(s) 573
PspGI CCWGG 2 cut(s) 1350, 1513
PspN4I GGNNCC 5 cut(s) 748, 1159, 1362, 1801, 1892
PspPI GGNCC 2 cut(s) 1192, 1778
PsuI RGATCY 3 cut(s) 331, 1204, 1366
RsaI GTAC 6 cut(s) 345, 1140, 1414, 1581, 1603, 1991
RsaNI GTAC 6 cut(s) 344, 1139, 1413, 1580, 1602, 1990
RseI CAYNNNNRTG 6 cut(s) 105, 527, 989, 1004, 1031, 1187
SaqAI TTAA 8 cut(s) 381, 504, 1029, 1257, 1319, 1608, 1770, 1977
SatI GCNGC 4 cut(s) 6, 9, 450, 1760
Sau3AI GATC 9 cut(s) 331, 972, 1075, 1204, 1302, 1366, 1399, 1831, 1882
Sau96I GGNCC 2 cut(s) 1192, 1778
SchI GAGTC 2 cut(s) 1283, 1387
ScrFI CCNGG 6 cut(s) 82, 83, 1095, 1352, 1515, 1623
SduI GDGCHC 4 cut(s) 279, 423, 749, 1534
Sfr274I CTCGAG 1 cut(s) 1388
SinI GGWCC 2 cut(s) 1192, 1778
SlaI CTCGAG 1 cut(s) 1388
SmaI CCCGGG 1 cut(s) 83
SmiMI CAYNNNNRTG 6 cut(s) 105, 527, 989, 1004, 1031, 1187
SmlI CTYRAG 2 cut(s) 1256, 1388
SmoI CTYRAG 2 cut(s) 1256, 1388
SseBI AGGCCT 1 cut(s) 1970
SsiI CCGC 3 cut(s) 72, 368, 1760
SspI AATATT 1 cut(s) 1774
StuI AGGCCT 1 cut(s) 1970
StyD4I CCNGG 6 cut(s) 80, 81, 1093, 1350, 1513, 1621
StyI CCWWGG 1 cut(s) 741
TaaI ACNGT 2 cut(s) 303, 1266
TaiI ACGT 5 cut(s) 121, 639, 1411, 1585, 1669
TaqI TCGA 7 cut(s) 209, 399, 888, 1292, 1389, 1654, 1921
TatI WGTACW 2 cut(s) 1138, 1412
TauI GCSGC 1 cut(s) 1762
TfiI GAWTC 5 cut(s) 206, 470, 491, 1023, 1090
Tru1I TTAA 8 cut(s) 381, 504, 1029, 1257, 1319, 1608, 1770, 1977
Tru9I TTAA 8 cut(s) 381, 504, 1029, 1257, 1319, 1608, 1770, 1977
TseFI GTSAC 1 cut(s) 1823
TseI GCWGC 3 cut(s) 5, 8, 449
Tsp45I GTSAC 1 cut(s) 1823
TspDTI ATGAA 5 cut(s) 282, 1015, 1425, 1644, 1972
TspGWI ACGGA 3 cut(s) 739, 994, 1549
TspMI CCCGGG 1 cut(s) 81
Vha464I CTTAAG 1 cut(s) 1256
VneI GTGCAC 2 cut(s) 275, 1530
VpaK11BI GGWCC 2 cut(s) 1192, 1778
VspI ATTAAT 1 cut(s) 1770
XagI CCTNNNNNAGG 1 cut(s) 1355
XapI RAATTY 3 cut(s) 810, 1497, 1632
XceI RCATGY 2 cut(s) 437, 900
XcmI CCANNNNNNNNNTGG 1 cut(s) 259
XhoI CTCGAG 1 cut(s) 1388
XmaI CCCGGG 1 cut(s) 81
ZraI GACGTC 1 cut(s) 637
Zsp2I ATGCAT 3 cut(s) 376, 1038, 1733
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.