Disease resistance protein (TIR-NBS-LRR class)
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2237 |
| AarI | CACCTGC | 1 cut(s) | 2395 |
| AatII | GACGTC | 1 cut(s) | 2832 |
| AbsI | CCTCGAGG | 1 cut(s) | 890 |
| Acc16I | TGCGCA | 1 cut(s) | 3313 |
| Acc36I | ACCTGC | 1 cut(s) | 2395 |
| Acc65I | GGTACC | 1 cut(s) | 2009 |
| AccB1I | GGYRCC | 1 cut(s) | 2009 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2755 |
| AccBSI | CCGCTC | 2 cut(s) | 3651, 4228 |
| AccI | GTMKAC | 2 cut(s) | 3282, 4823 |
| AccII | CGCG | 2 cut(s) | 252, 300 |
| AccIII | TCCGGA | 3 cut(s) | 2668, 3262, 3820 |
| AclI | AACGTT | 1 cut(s) | 4477 |
| AcoI | YGGCCR | 6 cut(s) | 181, 301, 1566, 1689, 2293, 3183 |
| AcsI | RAATTY | 9 cut(s) | 203, 1842, 2445, 2685, 3439, 3494, 4098, 4521, 4913 |
| AcuI | CTGAAG | 6 cut(s) | 35, 572, 1845, 2330, 2808, 3869 |
| AcvI | CACGTG | 1 cut(s) | 37 |
| AcyI | GRCGYC | 2 cut(s) | 247, 2829 |
| AdeI | CACNNNGTG | 1 cut(s) | 1398 |
| AfaI | GTAC | 8 cut(s) | 492, 628, 926, 2011, 2380, 2546, 2785, 2871 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 310, 358, 623, 919, 2675, 2755 |
| AflII | CTTAAG | 1 cut(s) | 2944 |
| AflIII | ACRYGT | 6 cut(s) | 36, 226, 1450, 1486, 2372, 4743 |
| AhlI | ACTAGT | 2 cut(s) | 272, 2275 |
| AjiI | CACGTC | 1 cut(s) | 2167 |
| AjnI | CCWGG | 7 cut(s) | 391, 450, 875, 2218, 2794, 3098, 3180 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 1832, 1864, 2006, 2038, 2196, 2228 |
| AleI | CACNNNNGTG | 3 cut(s) | 2820, 5041, 5123 |
| Alw21I | GWGCWC | 2 cut(s) | 4055, 4251 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2494, 4319 |
| Ama87I | CYCGRG | 4 cut(s) | 890, 2244, 3989, 4073 |
| Aor13HI | TCCGGA | 3 cut(s) | 2668, 3262, 3820 |
| ApeKI | GCWGC | 7 cut(s) | 1253, 2420, 2651, 3309, 3886, 3939, 4080 |
| ApoI | RAATTY | 9 cut(s) | 203, 1842, 2445, 2685, 3439, 3494, 4098, 4521, 4913 |
| ArsI | GACNNNNNNTTYG | 8 cut(s) | 364, 396, 4318, 4350, 5013, 5045, 5095, 5127 |
| AseI | ATTAAT | 1 cut(s) | 1070 |
| Asp700I | GAANNNNTTC | 8 cut(s) | 213, 590, 810, 1280, 1476, 1875, 3558, 4098 |
| Asp718I | GGTACC | 1 cut(s) | 2009 |
| AspA2I | CCTAGG | 2 cut(s) | 434, 3304 |
| AspLEI | GCGC | 4 cut(s) | 1217, 1494, 2404, 3314 |
| AspS9I | GGNCC | 6 cut(s) | 349, 960, 1094, 2216, 3178, 4362 |
| AsuC2I | CCSGG | 6 cut(s) | 347, 475, 648, 2774, 2932, 4512 |
| AsuII | TTCGAA | 1 cut(s) | 4598 |
| AvaI | CYCGRG | 4 cut(s) | 890, 2244, 3989, 4073 |
| AvaII | GGWCC | 4 cut(s) | 960, 1094, 3178, 4362 |
| AvrII | CCTAGG | 2 cut(s) | 434, 3304 |
| BaeGI | GKGCMC | 2 cut(s) | 3675, 5120 |
| BalI | TGGCCA | 3 cut(s) | 183, 1568, 2295 |
| BamHI | GGATCC | 1 cut(s) | 2914 |
| BanI | GGYRCC | 1 cut(s) | 2009 |
| BanII | GRGCYC | 2 cut(s) | 3918, 4200 |
| BbrPI | CACGTG | 1 cut(s) | 37 |
| BbsI | GAAGAC | 3 cut(s) | 1833, 2273, 4250 |
| Bbv12I | GWGCWC | 2 cut(s) | 4055, 4251 |
| BbvI | GCAGC | 7 cut(s) | 1240, 2407, 2638, 3296, 3873, 3926, 4067 |
| BccI | CCATC | 7 cut(s) | 356, 878, 1251, 1489, 2555, 3064, 3377 |
| BceAI | ACGGC | 3 cut(s) | 424, 2121, 3874 |
| BciT130I | CCWGG | 7 cut(s) | 393, 452, 877, 2220, 2796, 3100, 3182 |
| BclI | TGATCA | 2 cut(s) | 1362, 1656 |
| BcnI | CCSGG | 6 cut(s) | 347, 475, 648, 2774, 2932, 4512 |
| BcuI | ACTAGT | 2 cut(s) | 272, 2275 |
| BfmI | CTRYAG | 6 cut(s) | 1890, 2106, 2421, 3241, 3519, 4320 |
| BfrI | CTTAAG | 1 cut(s) | 2944 |
| BfuAI | ACCTGC | 1 cut(s) | 2395 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 255 |
| BglII | AGATCT | 2 cut(s) | 1085, 4141 |
| BlnI | CCTAGG | 2 cut(s) | 434, 3304 |
| Bme18I | GGWCC | 4 cut(s) | 960, 1094, 3178, 4362 |
| BmeT110I | CYCGRG | 4 cut(s) | 890, 2244, 3989, 4073 |
| BmgBI | CACGTC | 1 cut(s) | 2167 |
| BmgT120I | GGNCC | 6 cut(s) | 349, 960, 1094, 2216, 3178, 4362 |
| BmiI | GGNNCC | 9 cut(s) | 350, 521, 1096, 1321, 2011, 2132, 2916, 3834, 4636 |
| BmrI | ACTGGG | 2 cut(s) | 15, 3708 |
| BmuI | ACTGGG | 2 cut(s) | 15, 3708 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2832 |
| BpiI | GAAGAC | 3 cut(s) | 1833, 2273, 4250 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3983, 4015 |
| BpmI | CTGGAG | 3 cut(s) | 1102, 1319, 3121 |
| Bpu14I | TTCGAA | 1 cut(s) | 4598 |
| BpuEI | CTTGAG | 6 cut(s) | 3095, 3734, 3797, 3902, 4184, 4316 |
| BpuMI | CCSGG | 6 cut(s) | 347, 475, 648, 2774, 2932, 4512 |
| Bsa29I | ATCGAT | 1 cut(s) | 3159 |
| BsaAI | YACGTR | 1 cut(s) | 37 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2988 |
| BsaHI | GRCGYC | 2 cut(s) | 247, 2829 |
| BsaI | GGTCTC | 3 cut(s) | 166, 3552, 4157 |
| BsaWI | WCCGGW | 3 cut(s) | 2668, 3262, 3820 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1299, 1329, 4156, 4186 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 310, 358, 623, 919, 2675, 2755 |
| Bse3DI | GCAATG | 1 cut(s) | 4127 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2988 |
| BseAI | TCCGGA | 3 cut(s) | 2668, 3262, 3820 |
| BseBI | CCWGG | 7 cut(s) | 393, 452, 877, 2220, 2796, 3100, 3182 |
| BseCI | ATCGAT | 1 cut(s) | 3159 |
| BseJI | GATNNNNATC | 1 cut(s) | 2988 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 310, 358, 623, 919, 2675, 2755 |
| BseMI | GCAATG | 1 cut(s) | 4127 |
| BseMII | CTCAG | 3 cut(s) | 645, 3710, 4453 |
| BseRI | GAGGAG | 1 cut(s) | 1141 |
| BseSI | GKGCMC | 2 cut(s) | 3675, 5120 |
| BseXI | GCAGC | 7 cut(s) | 1240, 2407, 2638, 3296, 3873, 3926, 4067 |
| BseYI | CCCAGC | 2 cut(s) | 523, 4175 |
| BsgI | GTGCAG | 2 cut(s) | 701, 3925 |
| Bsh1236I | CGCG | 2 cut(s) | 252, 300 |
| BshNI | GGYRCC | 1 cut(s) | 2009 |
| BshVI | ATCGAT | 1 cut(s) | 3159 |
| BsiHKAI | GWGCWC | 2 cut(s) | 4055, 4251 |
| BsiHKCI | CYCGRG | 4 cut(s) | 890, 2244, 3989, 4073 |
| BslFI | GGGAC | 4 cut(s) | 1080, 2090, 3459, 3667 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 310, 358, 623, 919, 2675, 2755 |
| BsmBI | CGTCTC | 1 cut(s) | 238 |
| BsmFI | GGGAC | 4 cut(s) | 1080, 2090, 3459, 3667 |
| BsmI | GAATGC | 3 cut(s) | 810, 812, 1433 |
| Bso31I | GGTCTC | 3 cut(s) | 166, 3552, 4157 |
| BsoBI | CYCGRG | 4 cut(s) | 890, 2244, 3989, 4073 |
| Bsp119I | TTCGAA | 1 cut(s) | 4598 |
| Bsp1286I | GDGCHC | 6 cut(s) | 3675, 3918, 4055, 4200, 4251, 5120 |
| Bsp13I | TCCGGA | 3 cut(s) | 2668, 3262, 3820 |
| Bsp1407I | TGTACA | 3 cut(s) | 924, 2378, 2544 |
| Bsp19I | CCATGG | 3 cut(s) | 124, 178, 3174 |
| BspCNI | CTCAG | 3 cut(s) | 646, 3711, 4452 |
| BspDI | ATCGAT | 1 cut(s) | 3159 |
| BspEI | TCCGGA | 3 cut(s) | 2668, 3262, 3820 |
| BspFNI | CGCG | 2 cut(s) | 252, 300 |
| BspHI | TCATGA | 1 cut(s) | 1621 |
| BspLI | GGNNCC | 9 cut(s) | 350, 521, 1096, 1321, 2011, 2132, 2916, 3834, 4636 |
| BspMAI | CTGCAG | 2 cut(s) | 2425, 4324 |
| BspMI | ACCTGC | 1 cut(s) | 2395 |
| BspQI | GCTCTTC | 3 cut(s) | 2357, 2784, 3876 |
| BspT104I | TTCGAA | 1 cut(s) | 4598 |
| BspT107I | GGYRCC | 1 cut(s) | 2009 |
| BspTI | CTTAAG | 1 cut(s) | 2944 |
| BspTNI | GGTCTC | 3 cut(s) | 166, 3552, 4157 |
| BsrBI | CCGCTC | 2 cut(s) | 3651, 4228 |
| BsrDI | GCAATG | 1 cut(s) | 4127 |
| BsrGI | TGTACA | 3 cut(s) | 924, 2378, 2544 |
| BssNAI | GTATAC | 1 cut(s) | 3283 |
| BssNI | GRCGYC | 2 cut(s) | 247, 2829 |
| BssT1I | CCWWGG | 7 cut(s) | 124, 178, 434, 1098, 3174, 3304, 4888 |
| Bst1107I | GTATAC | 1 cut(s) | 3283 |
| Bst2UI | CCWGG | 7 cut(s) | 393, 452, 877, 2220, 2796, 3100, 3182 |
| Bst6I | CTCTTC | 7 cut(s) | 1963, 2349, 2357, 2784, 3876, 4352, 5124 |
| BstACI | GRCGYC | 2 cut(s) | 247, 2829 |
| BstAFI | CTTAAG | 1 cut(s) | 2944 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2417, 3615 |
| BstAUI | TGTACA | 3 cut(s) | 924, 2378, 2544 |
| BstBAI | YACGTR | 1 cut(s) | 37 |
| BstBI | TTCGAA | 1 cut(s) | 4598 |
| BstC8I | GCNNGC | 7 cut(s) | 529, 1108, 1932, 2293, 2368, 4226, 4435 |
| BstDEI | CTNAG | 8 cut(s) | 654, 1202, 2960, 3141, 3164, 3719, 4145, 4439 |
| BstDSI | CCRYGG | 5 cut(s) | 124, 178, 250, 298, 3174 |
| BstFNI | CGCG | 2 cut(s) | 252, 300 |
| BstHHI | GCGC | 4 cut(s) | 1217, 1494, 2404, 3314 |
| BstNI | CCWGG | 7 cut(s) | 393, 452, 877, 2220, 2796, 3100, 3182 |
| BstNSI | RCATGY | 5 cut(s) | 230, 1454, 1490, 2607, 4087 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2832 |
| BstSFI | CTRYAG | 6 cut(s) | 1890, 2106, 2421, 3241, 3519, 4320 |
| BstSLI | GKGCMC | 2 cut(s) | 3675, 5120 |
| BstUI | CGCG | 2 cut(s) | 252, 300 |
| BstV1I | GCAGC | 7 cut(s) | 1240, 2407, 2638, 3296, 3873, 3926, 4067 |
| BstV2I | GAAGAC | 3 cut(s) | 1833, 2273, 4250 |
| BstX2I | RGATCY | 8 cut(s) | 657, 689, 929, 1085, 1122, 2914, 4141, 4553 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3181 |
| BstYI | RGATCY | 8 cut(s) | 657, 689, 929, 1085, 1122, 2914, 4141, 4553 |
| BstZ17I | GTATAC | 1 cut(s) | 3283 |
| Bsu15I | ATCGAT | 1 cut(s) | 3159 |
| BsuTUI | ATCGAT | 1 cut(s) | 3159 |
| BtgI | CCRYGG | 5 cut(s) | 124, 178, 250, 298, 3174 |
| BtrI | CACGTC | 1 cut(s) | 2167 |
| BtsIMutI | CAGTG | 8 cut(s) | 718, 957, 1975, 2691, 3675, 4251, 4320, 4719 |
| BveI | ACCTGC | 1 cut(s) | 2395 |
| Cac8I | GCNNGC | 7 cut(s) | 529, 1108, 1932, 2293, 2368, 4226, 4435 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2494, 4319 |
| CciI | TCATGA | 1 cut(s) | 1621 |
| CfoI | GCGC | 4 cut(s) | 1217, 1494, 2404, 3314 |
| Cfr13I | GGNCC | 6 cut(s) | 349, 960, 1094, 2216, 3178, 4362 |
| Cfr42I | CCGCGG | 2 cut(s) | 253, 301 |
| ClaI | ATCGAT | 1 cut(s) | 3159 |
| CseI | GACGC | 3 cut(s) | 255, 1979, 4913 |
| Csp6I | GTAC | 8 cut(s) | 491, 627, 925, 2010, 2379, 2545, 2784, 2870 |
| CviQI | GTAC | 8 cut(s) | 491, 627, 925, 2010, 2379, 2545, 2784, 2870 |
| DdeI | CTNAG | 8 cut(s) | 654, 1202, 2960, 3141, 3164, 3719, 4145, 4439 |
| DraI | TTTAAA | 1 cut(s) | 3981 |
| DraIII | CACNNNGTG | 1 cut(s) | 1398 |
| EaeI | YGGCCR | 6 cut(s) | 181, 301, 1566, 1689, 2293, 3183 |
| Eam1104I | CTCTTC | 7 cut(s) | 1963, 2349, 2357, 2784, 3876, 4352, 5124 |
| EarI | CTCTTC | 7 cut(s) | 1963, 2349, 2357, 2784, 3876, 4352, 5124 |
| EciI | GGCGGA | 2 cut(s) | 2123, 2333 |
| Eco130I | CCWWGG | 7 cut(s) | 124, 178, 434, 1098, 3174, 3304, 4888 |
| Eco24I | GRGCYC | 2 cut(s) | 3918, 4200 |
| Eco31I | GGTCTC | 3 cut(s) | 166, 3552, 4157 |
| Eco32I | GATATC | 1 cut(s) | 3480 |
| Eco47I | GGWCC | 4 cut(s) | 960, 1094, 3178, 4362 |
| Eco57I | CTGAAG | 6 cut(s) | 35, 572, 1845, 2330, 2808, 3869 |
| Eco72I | CACGTG | 1 cut(s) | 37 |
| Eco88I | CYCGRG | 4 cut(s) | 890, 2244, 3989, 4073 |
| EcoRI | GAATTC | 1 cut(s) | 3494 |
| EcoRII | CCWGG | 7 cut(s) | 391, 450, 875, 2218, 2794, 3098, 3180 |
| EcoRV | GATATC | 1 cut(s) | 3480 |
| EcoT14I | CCWWGG | 7 cut(s) | 124, 178, 434, 1098, 3174, 3304, 4888 |
| EcoT22I | ATGCAT | 3 cut(s) | 812, 2940, 4374 |
| EcoT38I | GRGCYC | 2 cut(s) | 3918, 4200 |
| ErhI | CCWWGG | 7 cut(s) | 124, 178, 434, 1098, 3174, 3304, 4888 |
| Esp3I | CGTCTC | 1 cut(s) | 238 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 864, 896 |
| FaqI | GGGAC | 4 cut(s) | 1080, 2090, 3459, 3667 |
| FauI | CCCGC | 2 cut(s) | 3644, 4132 |
| FauNDI | CATATG | 2 cut(s) | 2729, 3093 |
| FbaI | TGATCA | 2 cut(s) | 1362, 1656 |
| FblI | GTMKAC | 2 cut(s) | 3282, 4823 |
| FriOI | GRGCYC | 2 cut(s) | 3918, 4200 |
| FspI | TGCGCA | 1 cut(s) | 3313 |
| GlaI | GCGC | 4 cut(s) | 1216, 1493, 2403, 3313 |
| GsaI | CCCAGC | 2 cut(s) | 527, 4179 |
| GsuI | CTGGAG | 3 cut(s) | 1102, 1319, 3121 |
| HgaI | GACGC | 3 cut(s) | 255, 1979, 4913 |
| HhaI | GCGC | 4 cut(s) | 1217, 1494, 2404, 3314 |
| Hin1I | GRCGYC | 2 cut(s) | 247, 2829 |
| Hin6I | GCGC | 4 cut(s) | 1215, 1492, 2402, 3312 |
| HinP1I | GCGC | 4 cut(s) | 1215, 1492, 2402, 3312 |
| HincII | GTYRAC | 2 cut(s) | 2119, 2899 |
| HindII | GTYRAC | 2 cut(s) | 2119, 2899 |
| HindIII | AAGCTT | 5 cut(s) | 707, 1581, 1674, 2922, 4571 |
| Hpy99I | CGWCG | 5 cut(s) | 1973, 2168, 3735, 4682, 4729 |
| HpyCH4IV | ACGT | 7 cut(s) | 36, 2166, 2374, 2829, 4477, 4743, 4927 |
| HpyF3I | CTNAG | 8 cut(s) | 654, 1202, 2960, 3141, 3164, 3719, 4145, 4439 |
| HpySE526I | ACGT | 7 cut(s) | 36, 2166, 2374, 2829, 4477, 4743, 4927 |
| Hsp92I | GRCGYC | 2 cut(s) | 247, 2829 |
| HspAI | GCGC | 4 cut(s) | 1215, 1492, 2402, 3312 |
| Kpn2I | TCCGGA | 3 cut(s) | 2668, 3262, 3820 |
| KpnI | GGTACC | 1 cut(s) | 2013 |
| Ksp22I | TGATCA | 2 cut(s) | 1362, 1656 |
| KspI | CCGCGG | 2 cut(s) | 253, 301 |
| LguI | GCTCTTC | 3 cut(s) | 2357, 2784, 3876 |
| LmnI | GCTCC | 8 cut(s) | 525, 1319, 1820, 2018, 2136, 3102, 3832, 4254 |
| Lsp1109I | GCAGC | 7 cut(s) | 1240, 2407, 2638, 3296, 3873, 3926, 4067 |
| MaeII | ACGT | 7 cut(s) | 36, 2166, 2374, 2829, 4477, 4743, 4927 |
| MbiI | CCGCTC | 2 cut(s) | 3651, 4228 |
| MfeI | CAATTG | 1 cut(s) | 2722 |
| MflI | RGATCY | 8 cut(s) | 657, 689, 929, 1085, 1122, 2914, 4141, 4553 |
| MhlI | GDGCHC | 6 cut(s) | 3675, 3918, 4055, 4200, 4251, 5120 |
| MlsI | TGGCCA | 3 cut(s) | 183, 1568, 2295 |
| MluNI | TGGCCA | 3 cut(s) | 183, 1568, 2295 |
| MlyI | GAGTC | 9 cut(s) | 337, 1071, 1947, 2263, 2348, 4823, 5037, 5082, 5119 |
| MmeI | TCCRAC | 6 cut(s) | 1297, 1614, 2892, 3172, 3434, 3848 |
| Mox20I | TGGCCA | 3 cut(s) | 183, 1568, 2295 |
| Mph1103I | ATGCAT | 3 cut(s) | 812, 2940, 4374 |
| MroI | TCCGGA | 3 cut(s) | 2668, 3262, 3820 |
| MroXI | GAANNNNTTC | 8 cut(s) | 213, 590, 810, 1280, 1476, 1875, 3558, 4098 |
| MscI | TGGCCA | 3 cut(s) | 183, 1568, 2295 |
| Msp20I | TGGCCA | 3 cut(s) | 183, 1568, 2295 |
| MspA1I | CMGCKG | 3 cut(s) | 252, 300, 675 |
| MspCI | CTTAAG | 1 cut(s) | 2944 |
| MunI | CAATTG | 1 cut(s) | 2722 |
| Mva1269I | GAATGC | 3 cut(s) | 810, 812, 1433 |
| MvaI | CCWGG | 7 cut(s) | 393, 452, 877, 2220, 2796, 3100, 3182 |
| MvnI | CGCG | 2 cut(s) | 252, 300 |
| NciI | CCSGG | 6 cut(s) | 347, 475, 648, 2774, 2932, 4512 |
| NcoI | CCATGG | 3 cut(s) | 124, 178, 3174 |
| NdeI | CATATG | 2 cut(s) | 2729, 3093 |
| NlaIV | GGNNCC | 9 cut(s) | 350, 521, 1096, 1321, 2011, 2132, 2916, 3834, 4636 |
| NmuCI | GTSAC | 7 cut(s) | 380, 3167, 4315, 4955, 4997, 5034, 5079 |
| NsbI | TGCGCA | 1 cut(s) | 3313 |
| NsiI | ATGCAT | 3 cut(s) | 812, 2940, 4374 |
| NspI | RCATGY | 5 cut(s) | 230, 1454, 1490, 2607, 4087 |
| NspV | TTCGAA | 1 cut(s) | 4598 |
| OliI | CACNNNNGTG | 3 cut(s) | 2820, 5041, 5123 |
| PaeR7I | CTCGAG | 3 cut(s) | 890, 2244, 3989 |
| PagI | TCATGA | 1 cut(s) | 1621 |
| PaqCI | CACCTGC | 1 cut(s) | 2395 |
| PciI | ACATGT | 3 cut(s) | 226, 1450, 1486 |
| PciSI | GCTCTTC | 3 cut(s) | 2357, 2784, 3876 |
| PctI | GAATGC | 3 cut(s) | 810, 812, 1433 |
| PdmI | GAANNNNTTC | 8 cut(s) | 213, 590, 810, 1280, 1476, 1875, 3558, 4098 |
| PflFI | GACNNNGTC | 2 cut(s) | 3450, 4303 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2755 |
| PfoI | TCCNGGA | 5 cut(s) | 391, 473, 646, 2772, 4510 |
| PleI | GAGTC | 9 cut(s) | 336, 1071, 1947, 2263, 2347, 4823, 5036, 5081, 5118 |
| PmaCI | CACGTG | 1 cut(s) | 37 |
| PmlI | CACGTG | 1 cut(s) | 37 |
| PpsI | GAGTC | 9 cut(s) | 336, 1071, 1947, 2263, 2347, 4823, 5036, 5081, 5118 |
| Ppu21I | YACGTR | 1 cut(s) | 37 |
| PscI | ACATGT | 3 cut(s) | 226, 1450, 1486 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2832 |
| PshBI | ATTAAT | 1 cut(s) | 1070 |
| PsiI | TTATAA | 1 cut(s) | 2237 |
| Psp1406I | AACGTT | 1 cut(s) | 4477 |
| Psp6I | CCWGG | 7 cut(s) | 391, 450, 875, 2218, 2794, 3098, 3180 |
| PspCI | CACGTG | 1 cut(s) | 37 |
| PspFI | CCCAGC | 2 cut(s) | 523, 4175 |
| PspGI | CCWGG | 7 cut(s) | 391, 450, 875, 2218, 2794, 3098, 3180 |
| PspN4I | GGNNCC | 9 cut(s) | 350, 521, 1096, 1321, 2011, 2132, 2916, 3834, 4636 |
| PspPI | GGNCC | 6 cut(s) | 349, 960, 1094, 2216, 3178, 4362 |
| PspXI | VCTCGAGB | 1 cut(s) | 890 |
| PstI | CTGCAG | 2 cut(s) | 2425, 4324 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2494, 4319 |
| PsuI | RGATCY | 8 cut(s) | 657, 689, 929, 1085, 1122, 2914, 4141, 4553 |
| PsyI | GACNNNGTC | 2 cut(s) | 3450, 4303 |
| PvuII | CAGCTG | 1 cut(s) | 675 |
| RsaI | GTAC | 8 cut(s) | 492, 628, 926, 2011, 2380, 2546, 2785, 2871 |
| RsaNI | GTAC | 8 cut(s) | 491, 627, 925, 2010, 2379, 2545, 2784, 2870 |
| SacII | CCGCGG | 2 cut(s) | 253, 301 |
| SapI | GCTCTTC | 3 cut(s) | 2357, 2784, 3876 |
| Sau96I | GGNCC | 6 cut(s) | 349, 960, 1094, 2216, 3178, 4362 |
| SchI | GAGTC | 9 cut(s) | 337, 1071, 1947, 2263, 2348, 4823, 5037, 5082, 5119 |
| SduI | GDGCHC | 6 cut(s) | 3675, 3918, 4055, 4200, 4251, 5120 |
| SfcI | CTRYAG | 6 cut(s) | 1890, 2106, 2421, 3241, 3519, 4320 |
| Sfr274I | CTCGAG | 3 cut(s) | 890, 2244, 3989 |
| Sfr303I | CCGCGG | 2 cut(s) | 253, 301 |
| SfuI | TTCGAA | 1 cut(s) | 4598 |
| SgrBI | CCGCGG | 2 cut(s) | 253, 301 |
| SinI | GGWCC | 4 cut(s) | 960, 1094, 3178, 4362 |
| SlaI | CTCGAG | 3 cut(s) | 890, 2244, 3989 |
| SpeI | ACTAGT | 2 cut(s) | 272, 2275 |
| SspI | AATATT | 4 cut(s) | 1476, 3460, 4446, 4567 |
| StyI | CCWWGG | 7 cut(s) | 124, 178, 434, 1098, 3174, 3304, 4888 |
| TaiI | ACGT | 7 cut(s) | 39, 2169, 2377, 2832, 4480, 4746, 4930 |
| TaqI | TCGA | 9 cut(s) | 891, 1052, 1968, 2245, 3159, 3325, 3972, 3990, 4598 |
| TaqII | GACCGA | 1 cut(s) | 4379 |
| TatI | WGTACW | 5 cut(s) | 924, 2378, 2544, 2783, 2869 |
| TauI | GCSGC | 6 cut(s) | 252, 303, 354, 1325, 1691, 4231 |
| TscAI | CASTG | 8 cut(s) | 725, 957, 1982, 2698, 3675, 4251, 4320, 4719 |
| TseFI | GTSAC | 7 cut(s) | 380, 3167, 4315, 4955, 4997, 5034, 5079 |
| TseI | GCWGC | 7 cut(s) | 1253, 2420, 2651, 3309, 3886, 3939, 4080 |
| Tsp45I | GTSAC | 7 cut(s) | 380, 3167, 4315, 4955, 4997, 5034, 5079 |
| TspGWI | ACGGA | 7 cut(s) | 1308, 1348, 1661, 4562, 4631, 4814, 4841 |
| TspRI | CASTG | 8 cut(s) | 725, 957, 1982, 2698, 3675, 4251, 4320, 4719 |
| Tth111I | GACNNNGTC | 2 cut(s) | 3450, 4303 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2755 |
| Vha464I | CTTAAG | 1 cut(s) | 2944 |
| VpaK11BI | GGWCC | 4 cut(s) | 960, 1094, 3178, 4362 |
| VspI | ATTAAT | 1 cut(s) | 1070 |
| XapI | RAATTY | 9 cut(s) | 203, 1842, 2445, 2685, 3439, 3494, 4098, 4521, 4913 |
| XbaI | TCTAGA | 4 cut(s) | 943, 2992, 4066, 4261 |
| XceI | RCATGY | 5 cut(s) | 230, 1454, 1490, 2607, 4087 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1399, 4190 |
| XhoI | CTCGAG | 3 cut(s) | 890, 2244, 3989 |
| XmaJI | CCTAGG | 2 cut(s) | 434, 3304 |
| XmiI | GTMKAC | 2 cut(s) | 3282, 4823 |
| XmnI | GAANNNNTTC | 8 cut(s) | 213, 590, 810, 1280, 1476, 1875, 3558, 4098 |
| ZraI | GACGTC | 1 cut(s) | 2830 |
| Zsp2I | ATGCAT | 3 cut(s) | 812, 2940, 4374 |