Disease resistance protein (TIR-NBS-LRR class)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| WHD_ROQ1 | PF23282 | 241 - 309 | 4.5e-23 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 623 - 705 | 2.5e-11 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 629 - 809 | 8.2e-11 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 706 - 796 | 1e-05 | Leucine-rich repeat region |
| C-JID | PF20160 | 875 - 1031 | 2e-13 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 541 |
| Acc36I | ACCTGC | 1 cut(s) | 541 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 901 |
| AccBSI | CCGCTC | 1 cut(s) | 1767 |
| AccI | GTMKAC | 2 cut(s) | 1395, 3023 |
| AccII | CGCG | 1 cut(s) | 3477 |
| AccIII | TCCGGA | 3 cut(s) | 814, 1375, 1936 |
| AciI | CCGC | 8 cut(s) | 334, 437, 464, 1767, 2241, 2344, 3477, 3481 |
| AclWI | GGATC | 7 cut(s) | 886, 1022, 1035, 1277, 1826, 2463, 2677 |
| AcoI | YGGCCR | 3 cut(s) | 69, 1296, 3478 |
| AcuI | CTGAAG | 4 cut(s) | 348, 476, 954, 1985 |
| AcvI | CACGTG | 1 cut(s) | 2944 |
| AdeI | CACNNNGTG | 2 cut(s) | 889, 2333 |
| AfaI | GTAC | 9 cut(s) | 526, 692, 931, 984, 1178, 1495, 1970, 3043, 3241 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 821, 901 |
| AflII | CTTAAG | 1 cut(s) | 1057 |
| AflIII | ACRYGT | 1 cut(s) | 2943 |
| AhlI | ACTAGT | 1 cut(s) | 421 |
| AjnI | CCWGG | 3 cut(s) | 940, 1211, 1293 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 335, 367 |
| AleI | CACNNNNGTG | 1 cut(s) | 2398 |
| Alw21I | GWGCWC | 3 cut(s) | 2171, 2367, 2395 |
| Alw44I | GTGCAC | 1 cut(s) | 2391 |
| AlwI | GGATC | 7 cut(s) | 886, 1022, 1035, 1277, 1826, 2463, 2677 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 640, 2196, 2435 |
| Ama87I | CYCGRG | 2 cut(s) | 2105, 3090 |
| Aor13HI | TCCGGA | 3 cut(s) | 814, 1375, 1936 |
| AoxI | GGCC | 6 cut(s) | 69, 439, 1296, 3094, 3406, 3478 |
| ApaLI | GTGCAC | 1 cut(s) | 2391 |
| ApeKI | GCWGC | 7 cut(s) | 191, 566, 797, 2002, 2196, 2612, 3387 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 2434, 2466, 3502, 3534 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 378, 1564, 1674, 2214, 3438 |
| AspA2I | CCTAGG | 1 cut(s) | 1417 |
| AspLEI | GCGC | 1 cut(s) | 550 |
| AspS9I | GGNCC | 2 cut(s) | 439, 2478 |
| AsuC2I | CCSGG | 2 cut(s) | 920, 2628 |
| AsuHPI | GGTGA | 6 cut(s) | 154, 169, 2831, 2894, 2942, 3290 |
| AsuII | TTCGAA | 2 cut(s) | 1568, 2714 |
| AvaI | CYCGRG | 2 cut(s) | 2105, 3090 |
| AvaII | GGWCC | 1 cut(s) | 2478 |
| AvrII | CCTAGG | 1 cut(s) | 1417 |
| BaeGI | GKGCMC | 2 cut(s) | 1791, 2395 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1952, 1985 |
| BalI | TGGCCA | 1 cut(s) | 71 |
| BamHI | GGATCC | 1 cut(s) | 1027 |
| BanII | GRGCYC | 1 cut(s) | 2034 |
| BauI | CACGAG | 1 cut(s) | 1225 |
| BbrPI | CACGTG | 1 cut(s) | 2944 |
| BbsI | GAAGAC | 3 cut(s) | 336, 419, 2366 |
| Bbv12I | GWGCWC | 3 cut(s) | 2171, 2367, 2395 |
| BbvI | GCAGC | 7 cut(s) | 203, 553, 784, 1989, 2183, 2624, 3374 |
| BccI | CCATC | 4 cut(s) | 701, 1177, 1600, 1660 |
| BceAI | ACGGC | 1 cut(s) | 1902 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1684, 1718 |
| BciT130I | CCWGG | 3 cut(s) | 942, 1213, 1295 |
| BclI | TGATCA | 1 cut(s) | 159 |
| BcnI | CCSGG | 2 cut(s) | 920, 2628 |
| BcuI | ACTAGT | 1 cut(s) | 421 |
| BfaI | CTAG | 7 cut(s) | 98, 422, 1106, 1418, 2232, 2378, 3465 |
| BfmI | CTRYAG | 5 cut(s) | 393, 567, 1635, 2056, 2436 |
| BfrI | CTTAAG | 1 cut(s) | 1057 |
| BfuAI | ACCTGC | 1 cut(s) | 541 |
| BglII | AGATCT | 1 cut(s) | 2257 |
| BlnI | CCTAGG | 1 cut(s) | 1417 |
| BmcAI | AGTACT | 2 cut(s) | 1178, 3241 |
| Bme1390I | CCNGG | 5 cut(s) | 920, 942, 1213, 1295, 2628 |
| Bme18I | GGWCC | 1 cut(s) | 2478 |
| BmeT110I | CYCGRG | 2 cut(s) | 2105, 3090 |
| BmgT120I | GGNCC | 2 cut(s) | 439, 2478 |
| BmiI | GGNNCC | 2 cut(s) | 1029, 1950 |
| BmrFI | CCNGG | 5 cut(s) | 920, 942, 1213, 1295, 2628 |
| BmrI | ACTGGG | 1 cut(s) | 1824 |
| BmsI | GCATC | 7 cut(s) | 769, 870, 1038, 1111, 2304, 2475, 2536 |
| BmuI | ACTGGG | 1 cut(s) | 1824 |
| BpiI | GAAGAC | 3 cut(s) | 336, 419, 2366 |
| BplI | GAGNNNNNCTC | 8 cut(s) | 758, 790, 1991, 2023, 2099, 2131, 2405, 2437 |
| BpmI | CTGGAG | 1 cut(s) | 1234 |
| Bpu14I | TTCGAA | 2 cut(s) | 1568, 2714 |
| BpuEI | CTTGAG | 6 cut(s) | 1017, 1850, 1913, 2018, 2300, 2432 |
| BpuMI | CCSGG | 2 cut(s) | 920, 2628 |
| Bsa29I | ATCGAT | 1 cut(s) | 1272 |
| BsaAI | YACGTR | 2 cut(s) | 2333, 2944 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2596 |
| BsaI | GGTCTC | 2 cut(s) | 1668, 2273 |
| BsaJI | CCNNGG | 8 cut(s) | 1211, 1417, 1586, 1730, 2396, 2758, 3091, 3403 |
| BsaWI | WCCGGW | 4 cut(s) | 814, 1375, 1936, 2603 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2272, 2302 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 821, 901 |
| Bse1I | ACTGG | 3 cut(s) | 316, 1819, 2360 |
| Bse3DI | GCAATG | 1 cut(s) | 2243 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2596 |
| BseAI | TCCGGA | 3 cut(s) | 814, 1375, 1936 |
| BseBI | CCWGG | 3 cut(s) | 942, 1213, 1295 |
| BseCI | ATCGAT | 1 cut(s) | 1272 |
| BseDI | CCNNGG | 8 cut(s) | 1211, 1417, 1586, 1730, 2396, 2758, 3091, 3403 |
| BseGI | GGATG | 7 cut(s) | 241, 366, 885, 1053, 2548, 2600, 3509 |
| BseJI | GATNNNNATC | 1 cut(s) | 2596 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 821, 901 |
| BseMI | GCAATG | 1 cut(s) | 2243 |
| BseMII | CTCAG | 4 cut(s) | 1826, 2022, 2203, 2436 |
| BseNI | ACTGG | 3 cut(s) | 316, 1819, 2360 |
| BseRI | GAGGAG | 1 cut(s) | 1961 |
| BseSI | GKGCMC | 2 cut(s) | 1791, 2395 |
| BseX3I | CGGCCG | 1 cut(s) | 3478 |
| BseXI | GCAGC | 7 cut(s) | 203, 553, 784, 1989, 2183, 2624, 3374 |
| BseYI | CCCAGC | 1 cut(s) | 2291 |
| Bsh1236I | CGCG | 1 cut(s) | 3477 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3481 |
| BshFI | GGCC | 6 cut(s) | 71, 441, 1298, 3096, 3408, 3480 |
| BshVI | ATCGAT | 1 cut(s) | 1272 |
| BsiEI | CGRYCG | 1 cut(s) | 3481 |
| BsiHKAI | GWGCWC | 3 cut(s) | 2171, 2367, 2395 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2105, 3090 |
| BsiSI | CCGG | 7 cut(s) | 59, 815, 919, 1376, 1937, 2604, 2627 |
| BslFI | GGGAC | 4 cut(s) | 1427, 1783, 1999, 3499 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 821, 901 |
| BsmFI | GGGAC | 4 cut(s) | 1427, 1783, 1999, 3499 |
| BsmI | GAATGC | 1 cut(s) | 2488 |
| BsnI | GGCC | 6 cut(s) | 71, 441, 1298, 3096, 3408, 3480 |
| Bso31I | GGTCTC | 2 cut(s) | 1668, 2273 |
| BsoBI | CYCGRG | 2 cut(s) | 2105, 3090 |
| Bsp119I | TTCGAA | 2 cut(s) | 1568, 2714 |
| Bsp1286I | GDGCHC | 5 cut(s) | 1791, 2034, 2171, 2367, 2395 |
| Bsp13I | TCCGGA | 3 cut(s) | 814, 1375, 1936 |
| Bsp1407I | TGTACA | 3 cut(s) | 524, 690, 1493 |
| Bsp19I | CCATGG | 2 cut(s) | 1586, 1730 |
| BspACI | CCGC | 8 cut(s) | 334, 437, 464, 1767, 2241, 2344, 3477, 3481 |
| BspANI | GGCC | 6 cut(s) | 71, 441, 1298, 3096, 3408, 3480 |
| BspCNI | CTCAG | 4 cut(s) | 1827, 2021, 2202, 2435 |
| BspDI | ATCGAT | 1 cut(s) | 1272 |
| BspEI | TCCGGA | 3 cut(s) | 814, 1375, 1936 |
| BspFNI | CGCG | 1 cut(s) | 3477 |
| BspHI | TCATGA | 2 cut(s) | 124, 1666 |
| BspLI | GGNNCC | 2 cut(s) | 1029, 1950 |
| BspMAI | CTGCAG | 3 cut(s) | 571, 2060, 2440 |
| BspMI | ACCTGC | 1 cut(s) | 541 |
| BspPI | GGATC | 7 cut(s) | 886, 1022, 1035, 1277, 1826, 2463, 2677 |
| BspQI | GCTCTTC | 3 cut(s) | 503, 930, 1992 |
| BspT104I | TTCGAA | 2 cut(s) | 1568, 2714 |
| BspTI | CTTAAG | 1 cut(s) | 1057 |
| BspTNI | GGTCTC | 2 cut(s) | 1668, 2273 |
| BsrBI | CCGCTC | 1 cut(s) | 1767 |
| BsrDI | GCAATG | 1 cut(s) | 2243 |
| BsrGI | TGTACA | 3 cut(s) | 524, 690, 1493 |
| BsrI | ACTGG | 3 cut(s) | 316, 1819, 2360 |
| BssECI | CCNNGG | 8 cut(s) | 1211, 1417, 1586, 1730, 2396, 2758, 3091, 3403 |
| BssNAI | GTATAC | 1 cut(s) | 1396 |
| BssSI | CACGAG | 1 cut(s) | 1225 |
| BssT1I | CCWWGG | 4 cut(s) | 1417, 1586, 1730, 3403 |
| Bst1107I | GTATAC | 1 cut(s) | 1396 |
| Bst2BI | CACGAG | 1 cut(s) | 1225 |
| Bst2UI | CCWGG | 3 cut(s) | 942, 1213, 1295 |
| Bst6I | CTCTTC | 5 cut(s) | 495, 503, 930, 1992, 2468 |
| BstAFI | CTTAAG | 1 cut(s) | 1057 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 563 |
| BstAUI | TGTACA | 3 cut(s) | 524, 690, 1493 |
| BstBAI | YACGTR | 2 cut(s) | 2333, 2944 |
| BstBI | TTCGAA | 2 cut(s) | 1568, 2714 |
| BstC8I | GCNNGC | 3 cut(s) | 439, 514, 2342 |
| BstDEI | CTNAG | 8 cut(s) | 1073, 1254, 1277, 1835, 2008, 2189, 2261, 2422 |
| BstDSI | CCRYGG | 4 cut(s) | 1586, 1730, 2396, 2758 |
| BstF5I | GGATG | 7 cut(s) | 241, 366, 885, 1053, 2548, 2600, 3509 |
| BstFNI | CGCG | 1 cut(s) | 3477 |
| BstHHI | GCGC | 1 cut(s) | 550 |
| BstMCI | CGRYCG | 1 cut(s) | 3481 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 554, 563, 996, 1207, 2232, 2320, 2695 |
| BstNI | CCWGG | 3 cut(s) | 942, 1213, 1295 |
| BstNSI | RCATGY | 2 cut(s) | 753, 2344 |
| BstSCI | CCNGG | 5 cut(s) | 918, 940, 1211, 1293, 2626 |
| BstSFI | CTRYAG | 5 cut(s) | 393, 567, 1635, 2056, 2436 |
| BstSLI | GKGCMC | 2 cut(s) | 1791, 2395 |
| BstUI | CGCG | 1 cut(s) | 3477 |
| BstV1I | GCAGC | 7 cut(s) | 203, 553, 784, 1989, 2183, 2624, 3374 |
| BstV2I | GAAGAC | 3 cut(s) | 336, 419, 2366 |
| BstX2I | RGATCY | 3 cut(s) | 1027, 2257, 2669 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1294, 1659 |
| BstYI | RGATCY | 3 cut(s) | 1027, 2257, 2669 |
| BstZ17I | GTATAC | 1 cut(s) | 1396 |
| BstZI | CGGCCG | 1 cut(s) | 3478 |
| Bsu15I | ATCGAT | 1 cut(s) | 1272 |
| BsuRI | GGCC | 6 cut(s) | 71, 441, 1298, 3096, 3408, 3480 |
| BsuTUI | ATCGAT | 1 cut(s) | 1272 |
| BtgI | CCRYGG | 4 cut(s) | 1586, 1730, 2396, 2758 |
| BtgZI | GCGATG | 2 cut(s) | 3312, 3458 |
| BtsCI | GGATG | 7 cut(s) | 241, 366, 885, 1053, 2548, 2600, 3509 |
| BtsIMutI | CAGTG | 8 cut(s) | 837, 1791, 2197, 2367, 2436, 2874, 2919, 3520 |
| BveI | ACCTGC | 1 cut(s) | 541 |
| Cac8I | GCNNGC | 3 cut(s) | 439, 514, 2342 |
| CaiI | CAGNNNCTG | 3 cut(s) | 640, 2196, 2435 |
| CciI | TCATGA | 2 cut(s) | 124, 1666 |
| CciNI | GCGGCCGC | 1 cut(s) | 3478 |
| CfoI | GCGC | 1 cut(s) | 550 |
| Cfr13I | GGNCC | 2 cut(s) | 439, 2478 |
| ClaI | ATCGAT | 1 cut(s) | 1272 |
| CseI | GACGC | 2 cut(s) | 3116, 3119 |
| Csp6I | GTAC | 9 cut(s) | 525, 691, 930, 983, 1177, 1494, 1969, 3042, 3240 |
| CviQI | GTAC | 9 cut(s) | 525, 691, 930, 983, 1177, 1494, 1969, 3042, 3240 |
| DdeI | CTNAG | 8 cut(s) | 1073, 1254, 1277, 1835, 2008, 2189, 2261, 2422 |
| DraI | TTTAAA | 1 cut(s) | 2097 |
| DraIII | CACNNNGTG | 2 cut(s) | 889, 2333 |
| EaeI | YGGCCR | 3 cut(s) | 69, 1296, 3478 |
| EagI | CGGCCG | 1 cut(s) | 3478 |
| Eam1104I | CTCTTC | 5 cut(s) | 495, 503, 930, 1992, 2468 |
| EarI | CTCTTC | 5 cut(s) | 495, 503, 930, 1992, 2468 |
| EciI | GGCGGA | 1 cut(s) | 479 |
| EclXI | CGGCCG | 1 cut(s) | 3478 |
| Eco130I | CCWWGG | 4 cut(s) | 1417, 1586, 1730, 3403 |
| Eco24I | GRGCYC | 1 cut(s) | 2034 |
| Eco31I | GGTCTC | 2 cut(s) | 1668, 2273 |
| Eco47I | GGWCC | 1 cut(s) | 2478 |
| Eco52I | CGGCCG | 1 cut(s) | 3478 |
| Eco57I | CTGAAG | 4 cut(s) | 348, 476, 954, 1985 |
| Eco72I | CACGTG | 1 cut(s) | 2944 |
| Eco88I | CYCGRG | 2 cut(s) | 2105, 3090 |
| EcoRI | GAATTC | 1 cut(s) | 1610 |
| EcoRII | CCWGG | 3 cut(s) | 940, 1211, 1293 |
| EcoT14I | CCWWGG | 4 cut(s) | 1417, 1586, 1730, 3403 |
| EcoT22I | ATGCAT | 2 cut(s) | 1053, 2490 |
| EcoT38I | GRGCYC | 1 cut(s) | 2034 |
| ErhI | CCWWGG | 4 cut(s) | 1417, 1586, 1730, 3403 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 3163, 3195, 3526, 3558 |
| FaqI | GGGAC | 4 cut(s) | 1427, 1783, 1999, 3499 |
| FauI | CCCGC | 3 cut(s) | 430, 1760, 2248 |
| FauNDI | CATATG | 3 cut(s) | 875, 1206, 3274 |
| FbaI | TGATCA | 1 cut(s) | 159 |
| FblI | GTMKAC | 2 cut(s) | 1395, 3023 |
| FokI | GGATG | 7 cut(s) | 248, 353, 892, 1060, 2555, 2587, 3516 |
| FriOI | GRGCYC | 1 cut(s) | 2034 |
| FspBI | CTAG | 7 cut(s) | 98, 422, 1106, 1418, 2232, 2378, 3465 |
| GlaI | GCGC | 1 cut(s) | 549 |
| GsaI | CCCAGC | 1 cut(s) | 2295 |
| GsuI | CTGGAG | 1 cut(s) | 1234 |
| HaeIII | GGCC | 6 cut(s) | 71, 441, 1298, 3096, 3408, 3480 |
| HapII | CCGG | 7 cut(s) | 59, 815, 919, 1376, 1937, 2604, 2627 |
| HgaI | GACGC | 2 cut(s) | 3116, 3119 |
| HhaI | GCGC | 1 cut(s) | 550 |
| Hin6I | GCGC | 1 cut(s) | 548 |
| HinP1I | GCGC | 1 cut(s) | 548 |
| HincII | GTYRAC | 2 cut(s) | 1012, 1847 |
| HindII | GTYRAC | 2 cut(s) | 1012, 1847 |
| HindIII | AAGCTT | 4 cut(s) | 84, 177, 1035, 2687 |
| HpaII | CCGG | 7 cut(s) | 59, 815, 919, 1376, 1937, 2604, 2627 |
| HphI | GGTGA | 6 cut(s) | 154, 169, 2831, 2894, 2942, 3290 |
| Hpy99I | CGWCG | 4 cut(s) | 1923, 2819, 2882, 2929 |
| HpyCH4IV | ACGT | 5 cut(s) | 2332, 2877, 2943, 3040, 3057 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 554, 563, 996, 1207, 2232, 2320, 2695 |
| HpyF3I | CTNAG | 8 cut(s) | 1073, 1254, 1277, 1835, 2008, 2189, 2261, 2422 |
| HpySE526I | ACGT | 5 cut(s) | 2332, 2877, 2943, 3040, 3057 |
| HspAI | GCGC | 1 cut(s) | 548 |
| Kpn2I | TCCGGA | 3 cut(s) | 814, 1375, 1936 |
| Ksp22I | TGATCA | 1 cut(s) | 159 |
| LguI | GCTCTTC | 3 cut(s) | 503, 930, 1992 |
| LmnI | GCTCC | 4 cut(s) | 323, 1215, 1948, 2370 |
| Lsp1109I | GCAGC | 7 cut(s) | 203, 553, 784, 1989, 2183, 2624, 3374 |
| LweI | GCATC | 7 cut(s) | 769, 870, 1038, 1111, 2304, 2475, 2536 |
| MaeI | CTAG | 7 cut(s) | 98, 422, 1106, 1418, 2232, 2378, 3465 |
| MaeII | ACGT | 5 cut(s) | 2332, 2877, 2943, 3040, 3057 |
| MaeIII | GTNAC | 9 cut(s) | 1148, 1280, 2129, 2325, 2431, 2531, 3142, 3158, 3518 |
| MbiI | CCGCTC | 1 cut(s) | 1767 |
| MfeI | CAATTG | 1 cut(s) | 868 |
| MflI | RGATCY | 3 cut(s) | 1027, 2257, 2669 |
| MhlI | GDGCHC | 5 cut(s) | 1791, 2034, 2171, 2367, 2395 |
| MlsI | TGGCCA | 1 cut(s) | 71 |
| MluNI | TGGCCA | 1 cut(s) | 71 |
| MlyI | GAGTC | 2 cut(s) | 409, 494 |
| MmeI | TCCRAC | 3 cut(s) | 117, 1005, 1285 |
| Mox20I | TGGCCA | 1 cut(s) | 71 |
| Mph1103I | ATGCAT | 2 cut(s) | 1053, 2490 |
| MroI | TCCGGA | 3 cut(s) | 814, 1375, 1936 |
| MroXI | GAANNNNTTC | 5 cut(s) | 378, 1564, 1674, 2214, 3438 |
| MscI | TGGCCA | 1 cut(s) | 71 |
| MslI | CAYNNNNRTG | 9 cut(s) | 507, 842, 878, 1019, 1046, 1089, 1804, 1808, 2398 |
| Msp20I | TGGCCA | 1 cut(s) | 71 |
| MspCI | CTTAAG | 1 cut(s) | 1057 |
| MspI | CCGG | 7 cut(s) | 59, 815, 919, 1376, 1937, 2604, 2627 |
| MspR9I | CCNGG | 5 cut(s) | 920, 942, 1213, 1295, 2628 |
| MunI | CAATTG | 1 cut(s) | 868 |
| Mva1269I | GAATGC | 1 cut(s) | 2488 |
| MvaI | CCWGG | 3 cut(s) | 942, 1213, 1295 |
| MvnI | CGCG | 1 cut(s) | 3477 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 554, 563, 996, 1207, 2232, 2320, 2695 |
| NciI | CCSGG | 2 cut(s) | 920, 2628 |
| NcoI | CCATGG | 2 cut(s) | 1586, 1730 |
| NdeI | CATATG | 3 cut(s) | 875, 1206, 3274 |
| NlaIV | GGNNCC | 2 cut(s) | 1029, 1950 |
| NmuCI | GTSAC | 4 cut(s) | 2325, 2431, 3158, 3518 |
| NotI | GCGGCCGC | 1 cut(s) | 3478 |
| NsiI | ATGCAT | 2 cut(s) | 1053, 2490 |
| NspI | RCATGY | 2 cut(s) | 753, 2344 |
| NspV | TTCGAA | 2 cut(s) | 1568, 2714 |
| OliI | CACNNNNGTG | 1 cut(s) | 2398 |
| PaeI | GCATGC | 1 cut(s) | 2344 |
| PaeR7I | CTCGAG | 1 cut(s) | 2105 |
| PagI | TCATGA | 2 cut(s) | 124, 1666 |
| PaqCI | CACCTGC | 1 cut(s) | 541 |
| PciSI | GCTCTTC | 3 cut(s) | 503, 930, 1992 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1918, 2886 |
| PctI | GAATGC | 1 cut(s) | 2488 |
| PdmI | GAANNNNTTC | 5 cut(s) | 378, 1564, 1674, 2214, 3438 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 901 |
| PfoI | TCCNGGA | 2 cut(s) | 918, 2626 |
| PleI | GAGTC | 2 cut(s) | 409, 493 |
| PmaCI | CACGTG | 1 cut(s) | 2944 |
| PmlI | CACGTG | 1 cut(s) | 2944 |
| PpsI | GAGTC | 2 cut(s) | 409, 493 |
| Ppu21I | YACGTR | 2 cut(s) | 2333, 2944 |
| Psp6I | CCWGG | 3 cut(s) | 940, 1211, 1293 |
| PspCI | CACGTG | 1 cut(s) | 2944 |
| PspFI | CCCAGC | 1 cut(s) | 2291 |
| PspGI | CCWGG | 3 cut(s) | 940, 1211, 1293 |
| PspN4I | GGNNCC | 2 cut(s) | 1029, 1950 |
| PspPI | GGNCC | 2 cut(s) | 439, 2478 |
| PstI | CTGCAG | 3 cut(s) | 571, 2060, 2440 |
| PstNI | CAGNNNCTG | 3 cut(s) | 640, 2196, 2435 |
| PsuI | RGATCY | 3 cut(s) | 1027, 2257, 2669 |
| RsaI | GTAC | 9 cut(s) | 526, 692, 931, 984, 1178, 1495, 1970, 3043, 3241 |
| RsaNI | GTAC | 9 cut(s) | 525, 691, 930, 983, 1177, 1494, 1969, 3042, 3240 |
| RseI | CAYNNNNRTG | 9 cut(s) | 507, 842, 878, 1019, 1046, 1089, 1804, 1808, 2398 |
| SapI | GCTCTTC | 3 cut(s) | 503, 930, 1992 |
| Sau96I | GGNCC | 2 cut(s) | 439, 2478 |
| ScaI | AGTACT | 2 cut(s) | 1178, 3241 |
| SchI | GAGTC | 2 cut(s) | 409, 494 |
| ScrFI | CCNGG | 5 cut(s) | 920, 942, 1213, 1295, 2628 |
| SduI | GDGCHC | 5 cut(s) | 1791, 2034, 2171, 2367, 2395 |
| SfaNI | GCATC | 7 cut(s) | 769, 870, 1038, 1111, 2304, 2475, 2536 |
| SfcI | CTRYAG | 5 cut(s) | 393, 567, 1635, 2056, 2436 |
| Sfr274I | CTCGAG | 1 cut(s) | 2105 |
| SfuI | TTCGAA | 2 cut(s) | 1568, 2714 |
| SinI | GGWCC | 1 cut(s) | 2478 |
| SlaI | CTCGAG | 1 cut(s) | 2105 |
| SmiMI | CAYNNNNRTG | 9 cut(s) | 507, 842, 878, 1019, 1046, 1089, 1804, 1808, 2398 |
| SmlI | CTYRAG | 8 cut(s) | 1032, 1057, 1829, 1892, 2033, 2105, 2315, 2411 |
| SmoI | CTYRAG | 8 cut(s) | 1032, 1057, 1829, 1892, 2033, 2105, 2315, 2411 |
| SpeI | ACTAGT | 1 cut(s) | 421 |
| SphI | GCATGC | 1 cut(s) | 2344 |
| SsiI | CCGC | 8 cut(s) | 334, 437, 464, 1767, 2241, 2344, 3477, 3481 |
| SspI | AATATT | 4 cut(s) | 1576, 2683, 3221, 3233 |
| SspMI | CTAG | 7 cut(s) | 98, 422, 1106, 1418, 2232, 2378, 3465 |
| StyD4I | CCNGG | 5 cut(s) | 918, 940, 1211, 1293, 2626 |
| StyI | CCWWGG | 4 cut(s) | 1417, 1586, 1730, 3403 |
| TaiI | ACGT | 5 cut(s) | 2335, 2880, 2946, 3043, 3060 |
| TaqI | TCGA | 5 cut(s) | 1272, 1568, 2088, 2106, 2714 |
| TaqII | GACCGA | 1 cut(s) | 2495 |
| TatI | WGTACW | 7 cut(s) | 524, 690, 929, 982, 1176, 1493, 3239 |
| TauI | GCSGC | 3 cut(s) | 2347, 3480, 3483 |
| TscAI | CASTG | 8 cut(s) | 844, 1791, 2197, 2367, 2436, 2874, 2919, 3527 |
| TseFI | GTSAC | 4 cut(s) | 2325, 2431, 3158, 3518 |
| TseI | GCWGC | 7 cut(s) | 191, 566, 797, 2002, 2196, 2612, 3387 |
| Tsp45I | GTSAC | 4 cut(s) | 2325, 2431, 3158, 3518 |
| TspGWI | ACGGA | 7 cut(s) | 164, 2150, 2678, 2747, 3014, 3041, 3356 |
| TspRI | CASTG | 8 cut(s) | 844, 1791, 2197, 2367, 2436, 2874, 2919, 3527 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 901 |
| Vha464I | CTTAAG | 1 cut(s) | 1057 |
| VneI | GTGCAC | 1 cut(s) | 2391 |
| VpaK11BI | GGWCC | 1 cut(s) | 2478 |
| XbaI | TCTAGA | 2 cut(s) | 1105, 2377 |
| XceI | RCATGY | 2 cut(s) | 753, 2344 |
| XhoI | CTCGAG | 1 cut(s) | 2105 |
| XmaJI | CCTAGG | 1 cut(s) | 1417 |
| XmiI | GTMKAC | 2 cut(s) | 1395, 3023 |
| XmnI | GAANNNNTTC | 5 cut(s) | 378, 1564, 1674, 2214, 3438 |
| XspI | CTAG | 7 cut(s) | 98, 422, 1106, 1418, 2232, 2378, 3465 |
| ZrmI | AGTACT | 2 cut(s) | 1178, 3241 |
| Zsp2I | ATGCAT | 2 cut(s) | 1053, 2490 |