Rorug06G0189400

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
30395517 .. 30401264
5748 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0189400.1

Sequence Viewer

Length: 1629 bp
ATGGCCTCCTCTTCTCAGCACCGCTGCGTTTTCGTTGGGAATATTCCTTATGATGCCACTGAGGAACAGCTTATAGAAATCTGCCAGGAGGTTGGCCCTGTTGTATCTTTTAGGTTAGTTATTGATAGAGAGACTGGGAAACCAAAAGGTTACGGATTTTGTGAGTACAAGGATGAAGAGACAGCTTTAAGTGCTCGGCGTAATCTTCAGGGCTACGAGATCAATGGCCGCCAATTACGAGTTGATTTTGCTGAAAATGACAAAGGCACTGACAGAAATCGTGAACAGGGTCGTGGTGGACCTGGAGTGACTGCAAATGTTGACCCTCCAAAGCAAGTTGGAGGTGCAGCGGTTCATGGTGATTCTCTTCATAATCAGCCAATTGGGCTCCATATAGCAATAACTGCAGCAGCCGTCATGGCAGGAGCTCTAGGTGGTCCTCAGGCTGTTTTGCAGTCGAATCAAAATGGTTTGCAGAATCAGTCTGCATTGGCCAATGATCCTTTGACACTTCATCTAGCCAAAATGTCTAGGAGTCAATTGACTCAAATTATCTCGGAGGTCAAAGGAATGGCTATACAAAACAAGGAACTAGCTCATAAGTTATTTGTTGCAAGGCCACAGTTGCCAAAAGCTCTGTTTCAGGCACAAATAATGCTAGGGATGGTGACCCCACAACTGTTGCAGATGGCAAATATCAGGCAAGCTTCAGGTCAGCCCTCACAGCCTCTATTCAATCAGGGCCAACAGGTTCCATCACCTGCTGTTCAAAATCTTGCTGATCTAGGCCCTCCTGCTGAGAATAGGTTGATGCCTAAAATGCAAGATGGCCCATTTTCTGCGGTGCCTCAAAATTTATTGGTTCATAGCCAGTTTTCTGCACCTCGACAACAAAACATGCAGCCTCGAATGCAGCTTCCACAACATGCGAACCACAATGTTTTGCAACATGGCACACTGCTAGGGCAGGCTGGAATTCCAACACTTCCTCCCATGCACCCGCAGTCCTCAAGCGGTTTGTCCATTCGGTCACAAACGCAGGTTGCCAATTCTTCCGTACTAAACCAGAAAATGCAACCTCCTTTGTTACAACACCCTGGTCAGGTTGGGCCTTCACATTTGGGCCATAACACTCCAATGGTTCATCAAAATGCTACCATACAGCAGTCTCCTTTATCTCGTCCTTTTTCCGATGCCATCTTTCAGCCTGGTCCCTCAATATCTAAGGGAGTCTTACAGTCGATCAACAAGGATGCTGATAGATCTTCTCGAGTGGTAGCTGATTCTTCAGAATCAGTTAATCGCCCTTCAAAACTAATGAAGTTGGATGATGGAAGGAGCACCCCTTTGATGACAGGGGGTCTCAATGTGTCAAATGCCAATGAATCTGCATTGCCCAATGTTTATGGAGCGGGATTGTTGCCTGGAAAGCCTGTTCACAAATCAGAAGACATGTACTCTGAGAAACAAATTTCTGAGCCTCAGATTCCACCTGAGGTGGACTCTGCTTTACTGCAACAAGTTTTGAGCCTGCCACCTGAAAAATTAAGCTTGTTGTCACCAGAACAGCGACAAGAAGTCATTAAGCTGCAGGAGAGATTTCGGCGAGATCAGATTCAGCCATCTTAG

Protein Analysis

542

Amino Acids

58.74

Weight (kDa)

8.64

Isoelectric Point (pI)

63.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 10 - 80 1.8e-22 RNA recognition motif
CSTF2_hinge PF14327 162 - 229 4.3e-13 Hinge domain of cleavage stimulation factor subunit 2
CSTF_C PF14304 503 - 536 3.7e-08 Transcription termination and cleavage factor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 769
Acc36I ACCTGC 2 cut(s) 769, 1030
AccB1I GGYRCC 1 cut(s) 844
AccBSI CCGCTC 1 cut(s) 1412
AciI CCGC 7 cut(s) 22, 229, 350, 842, 1001, 1014, 1412
AclWI GGATC 1 cut(s) 494
AcoI YGGCCR 2 cut(s) 226, 492
AcsI RAATTY 3 cut(s) 853, 975, 1470
AcuI CTGAAG 3 cut(s) 191, 693, 1272
AfaI GTAC 3 cut(s) 167, 1059, 1457
AfiI CCNNNNNNNGG 1 cut(s) 1102
AflIII ACRYGT 1 cut(s) 1452
AgsI TTSAA 3 cut(s) 736, 770, 1311
AhdI GACNNNNNGTC 2 cut(s) 1359, 1577
AjnI CCWGG 5 cut(s) 84, 301, 1096, 1207, 1423
AloI GAACNNNNNNTCC 2 cut(s) 1419, 1451
Alw21I GWGCWC 3 cut(s) 196, 430, 1343
Alw26I GTCTC 4 cut(s) 125, 173, 1173, 1367
AlwI GGATC 1 cut(s) 494
Ama87I CYCGRG 1 cut(s) 1269
ApeKI GCWGC 7 cut(s) 24, 347, 407, 410, 901, 913, 1588
ApoI RAATTY 3 cut(s) 853, 975, 1470
AspS9I GGNCC 9 cut(s) 95, 299, 437, 742, 788, 830, 1109, 1123, 1211
AsuHPI GGTGA 4 cut(s) 371, 679, 750, 1551
AvaI CYCGRG 1 cut(s) 1269
AvaII GGWCC 3 cut(s) 299, 437, 1211
AxyI CCTNAGG 2 cut(s) 441, 1494
BalI TGGCCA 1 cut(s) 494
BanI GGYRCC 1 cut(s) 844
BanII GRGCYC 2 cut(s) 390, 430
BbsI GAAGAC 1 cut(s) 1455
Bbv12I GWGCWC 3 cut(s) 196, 430, 1343
BbvI GCAGC 7 cut(s) 11, 359, 419, 422, 913, 925, 1575
BccI CCATC 6 cut(s) 658, 682, 763, 821, 1205, 1325
BceAI ACGGC 1 cut(s) 398
BciT130I CCWGG 5 cut(s) 86, 303, 1098, 1209, 1425
BcoDI GTCTC 4 cut(s) 125, 173, 1173, 1367
BfaI CTAG 7 cut(s) 431, 518, 531, 593, 659, 785, 962
BfmI CTRYAG 2 cut(s) 405, 1589
BfuAI ACCTGC 2 cut(s) 769, 1030
BglI GCCNNNNNGGC 2 cut(s) 385, 419
BglII AGATCT 1 cut(s) 1262
BisI GCNGC 8 cut(s) 25, 229, 348, 408, 411, 902, 914, 1589
BlsI GCNGC 8 cut(s) 26, 230, 349, 409, 412, 903, 915, 1590
Bme1390I CCNGG 5 cut(s) 86, 303, 1098, 1209, 1425
Bme18I GGWCC 3 cut(s) 299, 437, 1211
BmeRI GACNNNNNGTC 2 cut(s) 1359, 1577
BmeT110I CYCGRG 1 cut(s) 1269
BmgT120I GGNCC 9 cut(s) 95, 299, 437, 742, 788, 830, 1109, 1123, 1211
BmiI GGNNCC 4 cut(s) 389, 753, 846, 1213
BmrFI CCNGG 5 cut(s) 86, 303, 1098, 1209, 1425
BmrI ACTGGG 1 cut(s) 144
BmsI GCATC 4 cut(s) 43, 801, 1183, 1243
BmuI ACTGGG 1 cut(s) 144
BpiI GAAGAC 1 cut(s) 1455
BplI GAGNNNNNCTC 2 cut(s) 1487, 1519
BpmI CTGGAG 1 cut(s) 324
BpuEI CTTGAG 1 cut(s) 994
BsaI GGTCTC 1 cut(s) 1367
BsaJI CCNNGG 1 cut(s) 1096
BsaXI ACNNNNNCTCC 2 cut(s) 973, 1003
Bsc4I CCNNNNNNNGG 1 cut(s) 1102
Bse1I ACTGG 2 cut(s) 139, 871
Bse21I CCTNAGG 2 cut(s) 441, 1494
Bse3DI GCAATG 1 cut(s) 1391
BseBI CCWGG 5 cut(s) 86, 303, 1098, 1209, 1425
BseDI CCNNGG 1 cut(s) 1096
BseGI GGATG 4 cut(s) 178, 669, 1258, 1333
BseLI CCNNNNNNNGG 1 cut(s) 1102
BseMI GCAATG 1 cut(s) 1391
BseMII CTCAG 8 cut(s) 29, 51, 455, 789, 1452, 1467, 1485, 1496
BseNI ACTGG 2 cut(s) 139, 871
BseXI GCAGC 7 cut(s) 11, 359, 419, 422, 913, 925, 1575
BsgI GTGCAG 2 cut(s) 366, 864
BshNI GGYRCC 1 cut(s) 844
BsiHKAI GWGCWC 3 cut(s) 196, 430, 1343
BsiHKCI CYCGRG 1 cut(s) 1269
BslFI GGGAC 1 cut(s) 1197
BslI CCNNNNNNNGG 1 cut(s) 1102
BsmAI GTCTC 4 cut(s) 125, 173, 1173, 1367
BsmFI GGGAC 1 cut(s) 1197
BsmI GAATGC 1 cut(s) 915
Bso31I GGTCTC 1 cut(s) 1367
BsoBI CYCGRG 1 cut(s) 1269
Bsp1286I GDGCHC 4 cut(s) 196, 390, 430, 1343
Bsp143I GATC 6 cut(s) 219, 499, 781, 1242, 1262, 1609
BspACI CCGC 7 cut(s) 22, 229, 350, 842, 1001, 1014, 1412
BspCNI CTCAG 8 cut(s) 28, 52, 454, 790, 1453, 1468, 1486, 1495
BspLI GGNNCC 4 cut(s) 389, 753, 846, 1213
BspMAI CTGCAG 2 cut(s) 409, 1593
BspMI ACCTGC 2 cut(s) 769, 1030
BspPI GGATC 1 cut(s) 494
BspT107I GGYRCC 1 cut(s) 844
BspTNI GGTCTC 1 cut(s) 1367
BsrBI CCGCTC 1 cut(s) 1412
BsrDI GCAATG 1 cut(s) 1391
BsrI ACTGG 2 cut(s) 139, 871
BssECI CCNNGG 1 cut(s) 1096
BssMI GATC 6 cut(s) 219, 499, 781, 1242, 1262, 1609
Bst2UI CCWGG 5 cut(s) 86, 303, 1098, 1209, 1425
Bst4CI ACNGT 3 cut(s) 624, 681, 1239
Bst6I CTCTTC 3 cut(s) 16, 171, 372
BstAPI GCANNNNNTGC 1 cut(s) 404
BstC8I GCNNGC 3 cut(s) 705, 969, 1532
BstEII GGTNACC 1 cut(s) 667
BstF5I GGATG 4 cut(s) 178, 669, 1258, 1333
BstKTI GATC 6 cut(s) 222, 502, 784, 1245, 1265, 1612
BstMAI GTCTC 4 cut(s) 125, 173, 1173, 1367
BstMBI GATC 6 cut(s) 219, 499, 781, 1242, 1262, 1609
BstMWI GCNNNNNNNGC 9 cut(s) 191, 385, 404, 419, 625, 724, 820, 910, 1429
BstNI CCWGG 5 cut(s) 86, 303, 1098, 1209, 1425
BstNSI RCATGY 3 cut(s) 901, 929, 1456
BstPI GGTNACC 1 cut(s) 667
BstSCI CCNGG 5 cut(s) 84, 301, 1096, 1207, 1423
BstSFI CTRYAG 2 cut(s) 405, 1589
BstV1I GCAGC 7 cut(s) 11, 359, 419, 422, 913, 925, 1575
BstV2I GAAGAC 1 cut(s) 1455
BstX2I RGATCY 1 cut(s) 1262
BstXI CCANNNNNNTGG 1 cut(s) 92
BstYI RGATCY 1 cut(s) 1262
Bsu36I CCTNAGG 2 cut(s) 441, 1494
BtsCI GGATG 4 cut(s) 178, 669, 1258, 1333
BtsI GCAGTG 1 cut(s) 956
BtsIMutI CAGTG 3 cut(s) 57, 267, 956
BveI ACCTGC 2 cut(s) 769, 1030
Cac8I GCNNGC 3 cut(s) 705, 969, 1532
Cfr13I GGNCC 9 cut(s) 95, 299, 437, 742, 788, 830, 1109, 1123, 1211
Csp6I GTAC 3 cut(s) 166, 1058, 1456
CspCI CAANNNNNGTGG 2 cut(s) 663, 698
CviAII CATG 7 cut(s) 356, 418, 898, 926, 950, 994, 1453
CviQI GTAC 3 cut(s) 166, 1058, 1456
DpnI GATC 6 cut(s) 221, 501, 783, 1244, 1264, 1611
DpnII GATC 6 cut(s) 219, 499, 781, 1242, 1262, 1609
DriI GACNNNNNGTC 2 cut(s) 1359, 1577
EaeI YGGCCR 2 cut(s) 226, 492
Eam1104I CTCTTC 3 cut(s) 16, 171, 372
Eam1105I GACNNNNNGTC 2 cut(s) 1359, 1577
EarI CTCTTC 3 cut(s) 16, 171, 372
Ecl136II GAGCTC 1 cut(s) 428
Eco24I GRGCYC 2 cut(s) 390, 430
Eco31I GGTCTC 1 cut(s) 1367
Eco47I GGWCC 3 cut(s) 299, 437, 1211
Eco53kI GAGCTC 1 cut(s) 428
Eco57I CTGAAG 3 cut(s) 191, 693, 1272
Eco81I CCTNAGG 2 cut(s) 441, 1494
Eco88I CYCGRG 1 cut(s) 1269
Eco91I GGTNACC 1 cut(s) 667
EcoICRI GAGCTC 1 cut(s) 428
EcoO109I RGGNCCY 1 cut(s) 788
EcoO65I GGTNACC 1 cut(s) 667
EcoRI GAATTC 1 cut(s) 975
EcoRII CCWGG 5 cut(s) 84, 301, 1096, 1207, 1423
EcoT38I GRGCYC 2 cut(s) 390, 430
FaeI CATG 7 cut(s) 359, 421, 901, 929, 953, 997, 1456
FalI AAGNNNNNCTT 2 cut(s) 1217, 1249
FaqI GGGAC 1 cut(s) 1197
FatI CATG 7 cut(s) 355, 417, 897, 925, 949, 993, 1452
FauI CCCGC 2 cut(s) 1008, 1405
Fnu4HI GCNGC 8 cut(s) 25, 229, 348, 408, 411, 902, 914, 1589
FokI GGATG 4 cut(s) 185, 676, 1265, 1340
FriOI GRGCYC 2 cut(s) 390, 430
Fsp4HI GCNGC 8 cut(s) 25, 229, 348, 408, 411, 902, 914, 1589
FspBI CTAG 7 cut(s) 431, 518, 531, 593, 659, 785, 962
GluI GCNGC 8 cut(s) 25, 229, 348, 408, 411, 902, 914, 1589
GsuI CTGGAG 1 cut(s) 324
Hin1II CATG 7 cut(s) 359, 421, 901, 929, 953, 997, 1456
HincII GTYRAC 1 cut(s) 322
HindII GTYRAC 1 cut(s) 322
HindIII AAGCTT 2 cut(s) 705, 1549
HphI GGTGA 4 cut(s) 371, 679, 750, 1551
Hpy166II GTNNAC 5 cut(s) 284, 299, 322, 1438, 1501
Hpy188I TCNGA 8 cut(s) 559, 1192, 1291, 1447, 1462, 1477, 1485, 1614
Hpy188III TCNNGA 2 cut(s) 281, 1269
Hpy8I GTNNAC 5 cut(s) 284, 299, 322, 1438, 1501
HpyAV CCTTC 3 cut(s) 1122, 1317, 1329
HpyCH4III ACNGT 3 cut(s) 624, 681, 1239
HpyF10VI GCNNNNNNNGC 9 cut(s) 191, 385, 404, 419, 625, 724, 820, 910, 1429
Hsp92II CATG 7 cut(s) 359, 421, 901, 929, 953, 997, 1456
Kzo9I GATC 6 cut(s) 219, 499, 781, 1242, 1262, 1609
LmnI GCTCC 4 cut(s) 393, 425, 1338, 1409
Lsp1109I GCAGC 7 cut(s) 11, 359, 419, 422, 913, 925, 1575
LweI GCATC 4 cut(s) 43, 801, 1183, 1243
MaeI CTAG 7 cut(s) 431, 518, 531, 593, 659, 785, 962
MaeIII GTNAC 6 cut(s) 149, 307, 667, 1029, 1086, 1557
MalI GATC 6 cut(s) 221, 501, 783, 1244, 1264, 1611
MbiI CCGCTC 1 cut(s) 1412
MboI GATC 6 cut(s) 219, 499, 781, 1242, 1262, 1609
MboII GAAGA 8 cut(s) 3, 188, 197, 359, 1044, 1257, 1278, 1460
MfeI CAATTG 2 cut(s) 381, 539
MflI RGATCY 1 cut(s) 1262
MhlI GDGCHC 4 cut(s) 196, 390, 430, 1343
MlsI TGGCCA 1 cut(s) 494
MluCI AATT 9 cut(s) 233, 381, 539, 549, 853, 975, 1048, 1470, 1544
MluNI TGGCCA 1 cut(s) 494
MlyI GAGTC 4 cut(s) 538, 544, 1239, 1496
MmeI TCCRAC 3 cut(s) 319, 1004, 1305
Mox20I TGGCCA 1 cut(s) 494
MscI TGGCCA 1 cut(s) 494
MseI TTAA 4 cut(s) 188, 1299, 1547, 1584
MslI CAYNNNNRTG 2 cut(s) 1136, 1149
Msp20I TGGCCA 1 cut(s) 494
MspA1I CMGCKG 2 cut(s) 24, 350
MspR9I CCNGG 5 cut(s) 86, 303, 1098, 1209, 1425
MunI CAATTG 2 cut(s) 381, 539
Mva1269I GAATGC 1 cut(s) 915
MvaI CCWGG 5 cut(s) 86, 303, 1098, 1209, 1425
MwoI GCNNNNNNNGC 9 cut(s) 191, 385, 404, 419, 625, 724, 820, 910, 1429
NdeII GATC 6 cut(s) 219, 499, 781, 1242, 1262, 1609
NlaIII CATG 7 cut(s) 359, 421, 901, 929, 953, 997, 1456
NlaIV GGNNCC 4 cut(s) 389, 753, 846, 1213
NmeAIII GCCGAG 1 cut(s) 175
NmuCI GTSAC 4 cut(s) 307, 667, 1029, 1557
NspI RCATGY 3 cut(s) 901, 929, 1456
PaeR7I CTCGAG 1 cut(s) 1269
PaqCI CACCTGC 1 cut(s) 769
PciI ACATGT 1 cut(s) 1452
PctI GAATGC 1 cut(s) 915
PfeI GAWTC 8 cut(s) 362, 460, 478, 1283, 1292, 1385, 1486, 1615
PkrI GCNGC 8 cut(s) 26, 230, 349, 409, 412, 903, 915, 1590
PleI GAGTC 4 cut(s) 538, 543, 1238, 1496
PpsI GAGTC 4 cut(s) 538, 543, 1238, 1496
PscI ACATGT 1 cut(s) 1452
Psp124BI GAGCTC 1 cut(s) 430
Psp6I CCWGG 5 cut(s) 84, 301, 1096, 1207, 1423
PspEI GGTNACC 1 cut(s) 667
PspGI CCWGG 5 cut(s) 84, 301, 1096, 1207, 1423
PspN4I GGNNCC 4 cut(s) 389, 753, 846, 1213
PspPI GGNCC 9 cut(s) 95, 299, 437, 742, 788, 830, 1109, 1123, 1211
PstI CTGCAG 2 cut(s) 409, 1593
PsuI RGATCY 1 cut(s) 1262
RsaI GTAC 3 cut(s) 167, 1059, 1457
RsaNI GTAC 3 cut(s) 166, 1058, 1456
RseI CAYNNNNRTG 2 cut(s) 1136, 1149
SacI GAGCTC 1 cut(s) 430
SaqAI TTAA 4 cut(s) 188, 1299, 1547, 1584
SatI GCNGC 8 cut(s) 25, 229, 348, 408, 411, 902, 914, 1589
Sau3AI GATC 6 cut(s) 219, 499, 781, 1242, 1262, 1609
Sau96I GGNCC 9 cut(s) 95, 299, 437, 742, 788, 830, 1109, 1123, 1211
SchI GAGTC 4 cut(s) 538, 544, 1239, 1496
ScrFI CCNGG 5 cut(s) 86, 303, 1098, 1209, 1425
SduI GDGCHC 4 cut(s) 196, 390, 430, 1343
SfaNI GCATC 4 cut(s) 43, 801, 1183, 1243
SfcI CTRYAG 2 cut(s) 405, 1589
Sfr274I CTCGAG 1 cut(s) 1269
SinI GGWCC 3 cut(s) 299, 437, 1211
SlaI CTCGAG 1 cut(s) 1269
SmiMI CAYNNNNRTG 2 cut(s) 1136, 1149
SmlI CTYRAG 2 cut(s) 1009, 1269
SmoI CTYRAG 2 cut(s) 1009, 1269
Sse9I AATT 9 cut(s) 233, 381, 539, 549, 853, 975, 1048, 1470, 1544
SsiI CCGC 7 cut(s) 22, 229, 350, 842, 1001, 1014, 1412
SspI AATATT 1 cut(s) 43
SspMI CTAG 7 cut(s) 431, 518, 531, 593, 659, 785, 962
SstI GAGCTC 1 cut(s) 430
StyD4I CCNGG 5 cut(s) 84, 301, 1096, 1207, 1423
TaaI ACNGT 3 cut(s) 624, 681, 1239
TaqI TCGA 5 cut(s) 458, 886, 907, 1241, 1270
TaqII GACCGA 1 cut(s) 1017
TasI AATT 9 cut(s) 233, 381, 539, 549, 853, 975, 1048, 1470, 1544
TatI WGTACW 2 cut(s) 165, 1455
TauI GCSGC 1 cut(s) 231
TfiI GAWTC 8 cut(s) 362, 460, 478, 1283, 1292, 1385, 1486, 1615
Tru1I TTAA 4 cut(s) 188, 1299, 1547, 1584
Tru9I TTAA 4 cut(s) 188, 1299, 1547, 1584
TscAI CASTG 3 cut(s) 64, 274, 963
TseFI GTSAC 4 cut(s) 307, 667, 1029, 1557
TseI GCWGC 7 cut(s) 24, 347, 407, 410, 901, 913, 1588
Tsp45I GTSAC 4 cut(s) 307, 667, 1029, 1557
TspDTI ATGAA 8 cut(s) 189, 344, 359, 503, 854, 1133, 1334, 1398
TspGWI ACGGA 2 cut(s) 168, 1045
TspRI CASTG 3 cut(s) 64, 274, 963
VpaK11BI GGWCC 3 cut(s) 299, 437, 1211
XapI RAATTY 3 cut(s) 853, 975, 1470
XceI RCATGY 3 cut(s) 901, 929, 1456
XhoI CTCGAG 1 cut(s) 1269
XspI CTAG 7 cut(s) 431, 518, 531, 593, 659, 785, 962
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.