Rh5DG185100

RESISTANCE protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Forward (+)
20570005 .. 20573028
3024 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG185100.1

Sequence Viewer

Length: 858 bp
ATGGACAAGGTGCTCACGTGGAGAGATGCTCTGAAAACAGCAGCTAATATATCTGGATTTGATTCCCAAACAATTAGGCTCGAGTCTGAATTAGTTAATATTGTGGTCAATGACATTTTGGCGAAATTGAATCGCAAATCGGAAATGGCAAGTGGTTTAGAGGGCCTGGTTGGAATCGAAAAACACGTCCGACAAGTTGAATCGTTATTATGCCTTCACTCACAGGATGTCCGGACCGTAGGTATTTGGGGTATGGGTGGTATCGGTAAGACCACTATTGCTGATGTTGTATTTCACCTTCTCTCTTCTCAATTCGAAGCTTGCTGCTTTATTGCAAATGTTAGGGAAGCATCAGAGACAAGACATGGACTAAATGATTTGCGAAATCAACTGCTTTGTACCGTACTTAAGGAAGGCAATCTATATGTGGCCGCTCCATCTATTGGATCAAGTAGATTGTGGCTTGCTACTGATGTTCGTCGTGTATTGGAAAAGAATACGGGTACTGAAGCCATTGAGTGCATAGTCATGAACATGGATCTCATTACAGATTTACACCTCCCTCCTGGGCTGAAGGAGCTGTACTTGAGCGGTTGTGAGAGTCTGGGGTCTTTGCCTGTCGAGCTCCCGCCTGGGCTGTTGAAACTGGACTTGAGCAATTGCAAGAGCCTTGGGTCTTTACCAAAGCTGCCATGGCTTCTACACAGGTTGGATGCACATGGCTGCACGTCACTAGAGACAGTCTCAAGTTCGATGAGGACTGCACCCATACAAGGTTGGGATCAATATGTCAACAATTCTGCTTGTTTCCTAATCCGGCCTGGCGCTGACAAGTTGTCAACCCCATCGCAAAATTAA

Protein Analysis

285

Amino Acids

31.15

Weight (kDa)

5.99

Isoelectric Point (pI)

42.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 3 - 59 1e-05 TIR domain
NB-ARC PF00931 60 - 121 4.2e-07 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 443
AccBSI CCGCTC 2 cut(s) 434, 591
AccIII TCCGGA 1 cut(s) 231
AciI CCGC 3 cut(s) 432, 591, 629
AclWI GGATC 3 cut(s) 454, 546, 789
AcoI YGGCCR 1 cut(s) 429
AcuI CTGAAG 2 cut(s) 528, 593
AcvI CACGTG 1 cut(s) 18
AfaI GTAC 4 cut(s) 400, 405, 505, 584
AfiI CCNNNNNNNGG 2 cut(s) 443, 773
AflII CTTAAG 1 cut(s) 407
AflIII ACRYGT 1 cut(s) 184
AgsI TTSAA 3 cut(s) 130, 200, 643
AhdI GACNNNNNGTC 1 cut(s) 835
AjiI CACGTC 2 cut(s) 187, 729
AjnI CCWGG 4 cut(s) 165, 565, 631, 820
AluBI AGCT 5 cut(s) 44, 320, 580, 625, 688
AluI AGCT 5 cut(s) 44, 320, 580, 625, 688
Alw21I GWGCWC 2 cut(s) 15, 627
Alw26I GTCTC 3 cut(s) 350, 731, 748
AlwI GGATC 3 cut(s) 454, 546, 789
Ama87I CYCGRG 1 cut(s) 80
Aor13HI TCCGGA 1 cut(s) 231
AoxI GGCC 3 cut(s) 163, 429, 818
ApeKI GCWGC 4 cut(s) 41, 324, 688, 723
ArsI GACNNNNNNTTYG 2 cut(s) 171, 203
AspLEI GCGC 1 cut(s) 827
AspS9I GGNCC 2 cut(s) 163, 234
AsuHPI GGTGA 1 cut(s) 287
AsuII TTCGAA 1 cut(s) 315
AvaI CYCGRG 1 cut(s) 80
AvaII GGWCC 1 cut(s) 234
BanII GRGCYC 1 cut(s) 627
BarI GAAGNNNNNNTAC 4 cut(s) 282, 314, 566, 598
BbrPI CACGTG 1 cut(s) 18
Bbv12I GWGCWC 2 cut(s) 15, 627
BbvI GCAGC 4 cut(s) 53, 311, 675, 710
BccI CCATC 2 cut(s) 445, 853
BciT130I CCWGG 4 cut(s) 167, 567, 633, 822
BcoDI GTCTC 3 cut(s) 350, 731, 748
BfaI CTAG 1 cut(s) 734
BfoI RGCGCY 1 cut(s) 828
BfrI CTTAAG 1 cut(s) 407
BisI GCNGC 5 cut(s) 42, 325, 432, 689, 724
BlsI GCNGC 5 cut(s) 43, 326, 433, 690, 725
Bme1390I CCNGG 4 cut(s) 167, 567, 633, 822
Bme18I GGWCC 1 cut(s) 234
BmeRI GACNNNNNGTC 1 cut(s) 835
BmeT110I CYCGRG 1 cut(s) 80
BmgBI CACGTC 2 cut(s) 187, 729
BmgT120I GGNCC 2 cut(s) 163, 234
BmrFI CCNGG 4 cut(s) 167, 567, 633, 822
BmsI GCATC 3 cut(s) 16, 359, 703
BplI GAGNNNNNCTC 4 cut(s) 13, 45, 728, 760
Bpu14I TTCGAA 1 cut(s) 315
BpuEI CTTGAG 3 cut(s) 607, 673, 730
BsaAI YACGTR 1 cut(s) 18
BsaJI CCNNGG 4 cut(s) 566, 632, 670, 692
BsaWI WCCGGW 1 cut(s) 231
Bsc4I CCNNNNNNNGG 2 cut(s) 443, 773
Bse1I ACTGG 1 cut(s) 651
BseAI TCCGGA 1 cut(s) 231
BseBI CCWGG 4 cut(s) 167, 567, 633, 822
BseDI CCNNGG 4 cut(s) 566, 632, 670, 692
BseGI GGATG 2 cut(s) 232, 718
BseLI CCNNNNNNNGG 2 cut(s) 443, 773
BseNI ACTGG 1 cut(s) 651
BseXI GCAGC 4 cut(s) 53, 311, 675, 710
BsgI GTGCAG 2 cut(s) 709, 747
BshFI GGCC 3 cut(s) 165, 431, 820
BsiHKAI GWGCWC 2 cut(s) 15, 627
BsiHKCI CYCGRG 1 cut(s) 80
BsiSI CCGG 2 cut(s) 232, 817
BslI CCNNNNNNNGG 2 cut(s) 443, 773
BsmAI GTCTC 3 cut(s) 350, 731, 748
BsnI GGCC 3 cut(s) 165, 431, 820
BsoBI CYCGRG 1 cut(s) 80
Bsp119I TTCGAA 1 cut(s) 315
Bsp1286I GDGCHC 2 cut(s) 15, 627
Bsp13I TCCGGA 1 cut(s) 231
Bsp143I GATC 3 cut(s) 446, 538, 781
Bsp19I CCATGG 1 cut(s) 692
BspACI CCGC 3 cut(s) 432, 591, 629
BspANI GGCC 3 cut(s) 165, 431, 820
BspEI TCCGGA 1 cut(s) 231
BspHI TCATGA 1 cut(s) 528
BspPI GGATC 3 cut(s) 454, 546, 789
BspT104I TTCGAA 1 cut(s) 315
BspTI CTTAAG 1 cut(s) 407
BsrBI CCGCTC 2 cut(s) 434, 591
BsrI ACTGG 1 cut(s) 651
BssECI CCNNGG 4 cut(s) 566, 632, 670, 692
BssMI GATC 3 cut(s) 446, 538, 781
BssT1I CCWWGG 2 cut(s) 670, 692
Bst2UI CCWGG 4 cut(s) 167, 567, 633, 822
Bst4CI ACNGT 3 cut(s) 238, 403, 742
Bst6I CTCTTC 1 cut(s) 310
BstAFI CTTAAG 1 cut(s) 407
BstBAI YACGTR 1 cut(s) 18
BstBI TTCGAA 1 cut(s) 315
BstC8I GCNNGC 2 cut(s) 322, 465
BstDSI CCRYGG 1 cut(s) 692
BstF5I GGATG 2 cut(s) 232, 718
BstH2I RGCGCY 1 cut(s) 828
BstHHI GCGC 1 cut(s) 827
BstKTI GATC 3 cut(s) 449, 541, 784
BstMAI GTCTC 3 cut(s) 350, 731, 748
BstMBI GATC 3 cut(s) 446, 538, 781
BstMWI GCNNNNNNNGC 3 cut(s) 577, 622, 694
BstNI CCWGG 4 cut(s) 167, 567, 633, 822
BstSCI CCNGG 4 cut(s) 165, 565, 631, 820
BstV1I GCAGC 4 cut(s) 53, 311, 675, 710
BstX2I RGATCY 1 cut(s) 538
BstYI RGATCY 1 cut(s) 538
BsuRI GGCC 3 cut(s) 165, 431, 820
BtgI CCRYGG 1 cut(s) 692
BtgZI GCGATG 1 cut(s) 831
BtrI CACGTC 2 cut(s) 187, 729
BtsCI GGATG 2 cut(s) 232, 718
Cac8I GCNNGC 2 cut(s) 322, 465
CciI TCATGA 1 cut(s) 528
CfoI GCGC 1 cut(s) 827
Cfr13I GGNCC 2 cut(s) 163, 234
CpoI CGGWCCG 1 cut(s) 234
Csp6I GTAC 4 cut(s) 399, 404, 504, 583
CspI CGGWCCG 1 cut(s) 234
CviAII CATG 5 cut(s) 365, 529, 535, 693, 719
CviQI GTAC 4 cut(s) 399, 404, 504, 583
DpnI GATC 3 cut(s) 448, 540, 783
DpnII GATC 3 cut(s) 446, 538, 781
DriI GACNNNNNGTC 1 cut(s) 835
EaeI YGGCCR 1 cut(s) 429
Eam1104I CTCTTC 1 cut(s) 310
Eam1105I GACNNNNNGTC 1 cut(s) 835
EarI CTCTTC 1 cut(s) 310
Ecl136II GAGCTC 1 cut(s) 625
Eco130I CCWWGG 2 cut(s) 670, 692
Eco24I GRGCYC 1 cut(s) 627
Eco47I GGWCC 1 cut(s) 234
Eco53kI GAGCTC 1 cut(s) 625
Eco57I CTGAAG 2 cut(s) 528, 593
Eco72I CACGTG 1 cut(s) 18
Eco88I CYCGRG 1 cut(s) 80
EcoICRI GAGCTC 1 cut(s) 625
EcoO109I RGGNCCY 1 cut(s) 163
EcoRII CCWGG 4 cut(s) 165, 565, 631, 820
EcoT14I CCWWGG 2 cut(s) 670, 692
EcoT38I GRGCYC 1 cut(s) 627
ErhI CCWWGG 2 cut(s) 670, 692
FaeI CATG 5 cut(s) 368, 532, 538, 696, 722
FatI CATG 5 cut(s) 364, 528, 534, 692, 718
FauI CCCGC 1 cut(s) 636
Fnu4HI GCNGC 5 cut(s) 42, 325, 432, 689, 724
FokI GGATG 2 cut(s) 239, 725
FriOI GRGCYC 1 cut(s) 627
Fsp4HI GCNGC 5 cut(s) 42, 325, 432, 689, 724
FspBI CTAG 1 cut(s) 734
GlaI GCGC 1 cut(s) 826
GluI GCNGC 5 cut(s) 42, 325, 432, 689, 724
HaeII RGCGCY 1 cut(s) 828
HaeIII GGCC 3 cut(s) 165, 431, 820
HapII CCGG 2 cut(s) 232, 817
HhaI GCGC 1 cut(s) 827
Hin1II CATG 5 cut(s) 368, 532, 538, 696, 722
Hin6I GCGC 1 cut(s) 825
HinP1I GCGC 1 cut(s) 825
HincII GTYRAC 2 cut(s) 793, 840
HindII GTYRAC 2 cut(s) 793, 840
HindIII AAGCTT 1 cut(s) 318
HinfI GANTC 6 cut(s) 62, 83, 130, 174, 200, 601
HpaII CCGG 2 cut(s) 232, 817
HphI GGTGA 1 cut(s) 287
Hpy166II GTNNAC 2 cut(s) 793, 840
Hpy188I TCNGA 5 cut(s) 33, 88, 142, 191, 355
Hpy188III TCNNGA 3 cut(s) 54, 232, 529
Hpy8I GTNNAC 2 cut(s) 793, 840
Hpy99I CGWCG 1 cut(s) 483
HpyAV CCTTC 4 cut(s) 224, 308, 407, 568
HpyCH4III ACNGT 3 cut(s) 238, 403, 742
HpyCH4IV ACGT 3 cut(s) 17, 186, 728
HpyCH4V TGCA 6 cut(s) 335, 522, 663, 716, 726, 764
HpyF10VI GCNNNNNNNGC 3 cut(s) 577, 622, 694
HpySE526I ACGT 3 cut(s) 17, 186, 728
Hsp92II CATG 5 cut(s) 368, 532, 538, 696, 722
HspAI GCGC 1 cut(s) 825
Kpn2I TCCGGA 1 cut(s) 231
Kzo9I GATC 3 cut(s) 446, 538, 781
LmnI GCTCC 3 cut(s) 439, 577, 630
Lsp1109I GCAGC 4 cut(s) 53, 311, 675, 710
LweI GCATC 3 cut(s) 16, 359, 703
MaeI CTAG 1 cut(s) 734
MaeII ACGT 3 cut(s) 17, 186, 728
MaeIII GTNAC 1 cut(s) 729
MalI GATC 3 cut(s) 448, 540, 783
MbiI CCGCTC 2 cut(s) 434, 591
MboI GATC 3 cut(s) 446, 538, 781
MboII GAAGA 1 cut(s) 297
MfeI CAATTG 1 cut(s) 658
MflI RGATCY 1 cut(s) 538
MhlI GDGCHC 2 cut(s) 15, 627
MluCI AATT 7 cut(s) 72, 89, 125, 311, 658, 796, 853
MlyI GAGTC 2 cut(s) 92, 610
MmeI TCCRAC 3 cut(s) 151, 214, 690
MnlI CCTC 4 cut(s) 154, 569, 573, 750
MroI TCCGGA 1 cut(s) 231
MseI TTAA 3 cut(s) 96, 408, 856
MslI CAYNNNNRTG 2 cut(s) 527, 533
MspCI CTTAAG 1 cut(s) 407
MspI CCGG 2 cut(s) 232, 817
MspR9I CCNGG 4 cut(s) 167, 567, 633, 822
MunI CAATTG 1 cut(s) 658
MvaI CCWGG 4 cut(s) 167, 567, 633, 822
MwoI GCNNNNNNNGC 3 cut(s) 577, 622, 694
NcoI CCATGG 1 cut(s) 692
NdeII GATC 3 cut(s) 446, 538, 781
NlaIII CATG 5 cut(s) 368, 532, 538, 696, 722
NmuCI GTSAC 1 cut(s) 729
NspV TTCGAA 1 cut(s) 315
PaeR7I CTCGAG 1 cut(s) 80
PagI TCATGA 1 cut(s) 528
PcsI WCGNNNNNNNCGW 1 cut(s) 183
PfeI GAWTC 4 cut(s) 62, 130, 174, 200
PflMI CCANNNNNTGG 1 cut(s) 443
PkrI GCNGC 5 cut(s) 43, 326, 433, 690, 725
PleI GAGTC 2 cut(s) 91, 609
PmaCI CACGTG 1 cut(s) 18
PmlI CACGTG 1 cut(s) 18
PpsI GAGTC 2 cut(s) 91, 609
Ppu21I YACGTR 1 cut(s) 18
Psp124BI GAGCTC 1 cut(s) 627
Psp6I CCWGG 4 cut(s) 165, 565, 631, 820
PspCI CACGTG 1 cut(s) 18
PspGI CCWGG 4 cut(s) 165, 565, 631, 820
PspPI GGNCC 2 cut(s) 163, 234
PspXI VCTCGAGB 1 cut(s) 80
PsuI RGATCY 1 cut(s) 538
RsaI GTAC 4 cut(s) 400, 405, 505, 584
RsaNI GTAC 4 cut(s) 399, 404, 504, 583
RseI CAYNNNNRTG 2 cut(s) 527, 533
Rsr2I CGGWCCG 1 cut(s) 234
RsrII CGGWCCG 1 cut(s) 234
SacI GAGCTC 1 cut(s) 627
SaqAI TTAA 3 cut(s) 96, 408, 856
SatI GCNGC 5 cut(s) 42, 325, 432, 689, 724
Sau3AI GATC 3 cut(s) 446, 538, 781
Sau96I GGNCC 2 cut(s) 163, 234
SchI GAGTC 2 cut(s) 92, 610
ScrFI CCNGG 4 cut(s) 167, 567, 633, 822
SduI GDGCHC 2 cut(s) 15, 627
SfaNI GCATC 3 cut(s) 16, 359, 703
Sfr274I CTCGAG 1 cut(s) 80
SfuI TTCGAA 1 cut(s) 315
SinI GGWCC 1 cut(s) 234
SlaI CTCGAG 1 cut(s) 80
SmiMI CAYNNNNRTG 2 cut(s) 527, 533
SmlI CTYRAG 5 cut(s) 80, 407, 586, 652, 745
SmoI CTYRAG 5 cut(s) 80, 407, 586, 652, 745
Sse9I AATT 7 cut(s) 72, 89, 125, 311, 658, 796, 853
SsiI CCGC 3 cut(s) 432, 591, 629
SspI AATATT 1 cut(s) 100
SspMI CTAG 1 cut(s) 734
SstI GAGCTC 1 cut(s) 627
StyD4I CCNGG 4 cut(s) 165, 565, 631, 820
StyI CCWWGG 2 cut(s) 670, 692
TaaI ACNGT 3 cut(s) 238, 403, 742
TaiI ACGT 3 cut(s) 20, 189, 731
TaqI TCGA 5 cut(s) 81, 177, 315, 621, 752
TasI AATT 7 cut(s) 72, 89, 125, 311, 658, 796, 853
TatI WGTACW 1 cut(s) 582
TauI GCSGC 1 cut(s) 434
TfiI GAWTC 4 cut(s) 62, 130, 174, 200
Tru1I TTAA 3 cut(s) 96, 408, 856
Tru9I TTAA 3 cut(s) 96, 408, 856
TseFI GTSAC 1 cut(s) 729
TseI GCWGC 4 cut(s) 41, 324, 688, 723
Tsp45I GTSAC 1 cut(s) 729
TspDTI ATGAA 1 cut(s) 545
Van91I CCANNNNNTGG 1 cut(s) 443
Vha464I CTTAAG 1 cut(s) 407
VpaK11BI GGWCC 1 cut(s) 234
XcmI CCANNNNNNNNNTGG 1 cut(s) 690
XhoI CTCGAG 1 cut(s) 80
XspI CTAG 1 cut(s) 734
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.