Disease resistance protein (TIR-NBS-LRR class)
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 147, 779 |
| AarI | CACCTGC | 1 cut(s) | 937 |
| Acc36I | ACCTGC | 2 cut(s) | 937, 1916 |
| Acc65I | GGTACC | 1 cut(s) | 551 |
| AccB1I | GGYRCC | 2 cut(s) | 551, 2712 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1297 |
| AccI | GTMKAC | 1 cut(s) | 1824 |
| AccII | CGCG | 2 cut(s) | 3414, 3462 |
| AccIII | TCCGGA | 2 cut(s) | 1210, 1804 |
| AciI | CCGC | 8 cut(s) | 373, 676, 2656, 3412, 3414, 3460, 3462, 3514 |
| AclI | AACGTT | 2 cut(s) | 1451, 2905 |
| AcoI | YGGCCR | 2 cut(s) | 3343, 3463 |
| AcsI | RAATTY | 8 cut(s) | 384, 928, 936, 1981, 2036, 2140, 2952, 3365 |
| AcuI | CTGAAG | 7 cut(s) | 387, 872, 1061, 1749, 2330, 2851, 3197 |
| AcvI | CACGTG | 1 cut(s) | 3199 |
| AcyI | GRCGYC | 1 cut(s) | 3409 |
| AdeI | CACNNNGTG | 1 cut(s) | 1285 |
| AfaI | GTAC | 7 cut(s) | 126, 553, 682, 1327, 1413, 2008, 3151 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 1217, 1297, 3076, 3168, 3472, 3520 |
| AflII | CTTAAG | 1 cut(s) | 1486 |
| AflIII | ACRYGT | 3 cut(s) | 121, 3198, 3388 |
| AhlI | ACTAGT | 2 cut(s) | 817, 3434 |
| AjiI | CACGTC | 1 cut(s) | 709 |
| AjnI | CCWGG | 5 cut(s) | 1459, 1640, 1722, 2758, 3553 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 374, 406, 738, 770 |
| AleI | CACNNNNGTG | 1 cut(s) | 1362 |
| Alw21I | GWGCWC | 2 cut(s) | 2483, 2679 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1036, 2747 |
| Ama87I | CYCGRG | 3 cut(s) | 270, 786, 2716 |
| Aor13HI | TCCGGA | 2 cut(s) | 1210, 1804 |
| AoxI | GGCC | 7 cut(s) | 64, 757, 1672, 3156, 3343, 3463, 3511 |
| ApeKI | GCWGC | 6 cut(s) | 230, 908, 962, 1193, 2314, 2458 |
| ApoI | RAATTY | 8 cut(s) | 384, 928, 936, 1981, 2036, 2140, 2952, 3365 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 2547, 2579, 2746, 2778, 3526, 3558 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 417, 885, 3375 |
| Asp718I | GGTACC | 1 cut(s) | 551 |
| AspLEI | GCGC | 1 cut(s) | 1347 |
| AspS9I | GGNCC | 4 cut(s) | 758, 2130, 2790, 3511 |
| AsuC2I | CCSGG | 3 cut(s) | 762, 1338, 3509 |
| AsuHPI | GGTGA | 2 cut(s) | 1376, 3302 |
| AsuII | TTCGAA | 1 cut(s) | 26 |
| AvaI | CYCGRG | 3 cut(s) | 270, 786, 2716 |
| AvaII | GGWCC | 2 cut(s) | 2130, 2790 |
| BaeGI | GKGCMC | 2 cut(s) | 2217, 2717 |
| BalI | TGGCCA | 1 cut(s) | 3345 |
| BamHI | GGATCC | 2 cut(s) | 112, 1456 |
| BanI | GGYRCC | 2 cut(s) | 551, 2712 |
| BanII | GRGCYC | 1 cut(s) | 2628 |
| BbrPI | CACGTG | 1 cut(s) | 3199 |
| BbsI | GAAGAC | 3 cut(s) | 375, 1142, 2678 |
| Bbv12I | GWGCWC | 2 cut(s) | 2483, 2679 |
| BbvI | GCAGC | 6 cut(s) | 242, 895, 949, 1180, 2301, 2445 |
| BceAI | ACGGC | 1 cut(s) | 663 |
| BciT130I | CCWGG | 5 cut(s) | 1461, 1642, 1724, 2760, 3555 |
| BciVI | GTATCC | 1 cut(s) | 2498 |
| BcnI | CCSGG | 3 cut(s) | 762, 1338, 3509 |
| BcuI | ACTAGT | 2 cut(s) | 817, 3434 |
| BfmI | CTRYAG | 5 cut(s) | 432, 648, 963, 2368, 2748 |
| BfrI | CTTAAG | 1 cut(s) | 1486 |
| BfuAI | ACCTGC | 2 cut(s) | 937, 1916 |
| BfuI | GTATCC | 1 cut(s) | 2498 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3417 |
| BmcAI | AGTACT | 2 cut(s) | 1327, 2008 |
| Bme1390I | CCNGG | 8 cut(s) | 762, 1338, 1461, 1642, 1724, 2760, 3509, 3555 |
| Bme18I | GGWCC | 2 cut(s) | 2130, 2790 |
| BmeT110I | CYCGRG | 3 cut(s) | 270, 786, 2716 |
| BmgBI | CACGTC | 1 cut(s) | 709 |
| BmgT120I | GGNCC | 4 cut(s) | 758, 2130, 2790, 3511 |
| BmiI | GGNNCC | 7 cut(s) | 114, 553, 674, 760, 1458, 2714, 3512 |
| BmrFI | CCNGG | 8 cut(s) | 762, 1338, 1461, 1642, 1724, 2760, 3509, 3555 |
| BmrI | ACTGGG | 1 cut(s) | 3177 |
| BmsI | GCATC | 7 cut(s) | 469, 1165, 1266, 1540, 2616, 2848, 3346 |
| BmuI | ACTGGG | 1 cut(s) | 3177 |
| BpiI | GAAGAC | 3 cut(s) | 375, 1142, 2678 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2411, 2443 |
| BpmI | CTGGAG | 4 cut(s) | 762, 1482, 1596, 1663 |
| Bpu14I | TTCGAA | 1 cut(s) | 26 |
| BpuEI | CTTGAG | 5 cut(s) | 1637, 1703, 2438, 2612, 2744 |
| BpuMI | CCSGG | 3 cut(s) | 762, 1338, 3509 |
| Bsa29I | ATCGAT | 1 cut(s) | 1701 |
| BsaAI | YACGTR | 1 cut(s) | 3199 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1374 |
| BsaHI | GRCGYC | 1 cut(s) | 3409 |
| BsaI | GGTCTC | 3 cut(s) | 2094, 2585, 3328 |
| BsaWI | WCCGGW | 3 cut(s) | 1210, 1804, 2915 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2584, 2614 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 1217, 1297, 3076, 3168, 3472, 3520 |
| Bse1I | ACTGG | 5 cut(s) | 133, 355, 800, 2672, 3172 |
| Bse3DI | GCAATG | 1 cut(s) | 2119 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1374 |
| BseAI | TCCGGA | 2 cut(s) | 1210, 1804 |
| BseBI | CCWGG | 5 cut(s) | 1461, 1642, 1724, 2760, 3555 |
| BseCI | ATCGAT | 1 cut(s) | 1701 |
| BseJI | GATNNNNATC | 1 cut(s) | 1374 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 1217, 1297, 3076, 3168, 3472, 3520 |
| BseMI | GCAATG | 1 cut(s) | 2119 |
| BseMII | CTCAG | 4 cut(s) | 218, 2188, 2275, 2815 |
| BseNI | ACTGG | 5 cut(s) | 133, 355, 800, 2672, 3172 |
| BseRI | GAGGAG | 1 cut(s) | 573 |
| BseSI | GKGCMC | 2 cut(s) | 2217, 2717 |
| BseXI | GCAGC | 6 cut(s) | 242, 895, 949, 1180, 2301, 2445 |
| BseYI | CCCAGC | 1 cut(s) | 93 |
| BsgI | GTGCAG | 1 cut(s) | 1944 |
| Bsh1236I | CGCG | 2 cut(s) | 3414, 3462 |
| BshFI | GGCC | 7 cut(s) | 66, 759, 1674, 3158, 3345, 3465, 3513 |
| BshNI | GGYRCC | 2 cut(s) | 551, 2712 |
| BshVI | ATCGAT | 1 cut(s) | 1701 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2483, 2679 |
| BsiHKCI | CYCGRG | 3 cut(s) | 270, 786, 2716 |
| BsiSI | CCGG | 6 cut(s) | 762, 1211, 1337, 1805, 2916, 3508 |
| BslFI | GGGAC | 1 cut(s) | 632 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 1217, 1297, 3076, 3168, 3472, 3520 |
| BsmBI | CGTCTC | 2 cut(s) | 2291, 3400 |
| BsmFI | GGGAC | 1 cut(s) | 632 |
| BsmI | GAATGC | 1 cut(s) | 969 |
| BsnI | GGCC | 7 cut(s) | 66, 759, 1674, 3158, 3345, 3465, 3513 |
| Bso31I | GGTCTC | 3 cut(s) | 2094, 2585, 3328 |
| BsoBI | CYCGRG | 3 cut(s) | 270, 786, 2716 |
| Bsp119I | TTCGAA | 1 cut(s) | 26 |
| Bsp1286I | GDGCHC | 5 cut(s) | 2217, 2483, 2628, 2679, 2717 |
| Bsp13I | TCCGGA | 2 cut(s) | 1210, 1804 |
| Bsp1407I | TGTACA | 1 cut(s) | 3149 |
| Bsp19I | CCATGG | 3 cut(s) | 2156, 3286, 3340 |
| BspACI | CCGC | 8 cut(s) | 373, 676, 2656, 3412, 3414, 3460, 3462, 3514 |
| BspANI | GGCC | 7 cut(s) | 66, 759, 1674, 3158, 3345, 3465, 3513 |
| BspCNI | CTCAG | 4 cut(s) | 217, 2187, 2274, 2814 |
| BspDI | ATCGAT | 1 cut(s) | 1701 |
| BspEI | TCCGGA | 2 cut(s) | 1210, 1804 |
| BspFNI | CGCG | 2 cut(s) | 3414, 3462 |
| BspLI | GGNNCC | 7 cut(s) | 114, 553, 674, 760, 1458, 2714, 3512 |
| BspMAI | CTGCAG | 3 cut(s) | 967, 2372, 2752 |
| BspMI | ACCTGC | 2 cut(s) | 937, 1916 |
| BspQI | GCTCTTC | 2 cut(s) | 899, 2304 |
| BspT104I | TTCGAA | 1 cut(s) | 26 |
| BspT107I | GGYRCC | 2 cut(s) | 551, 2712 |
| BspTI | CTTAAG | 1 cut(s) | 1486 |
| BspTNI | GGTCTC | 3 cut(s) | 2094, 2585, 3328 |
| BsrDI | GCAATG | 1 cut(s) | 2119 |
| BsrGI | TGTACA | 1 cut(s) | 3149 |
| BsrI | ACTGG | 5 cut(s) | 133, 355, 800, 2672, 3172 |
| BssNAI | GTATAC | 1 cut(s) | 1825 |
| BssNI | GRCGYC | 1 cut(s) | 3409 |
| BssT1I | CCWWGG | 4 cut(s) | 1846, 2156, 3286, 3340 |
| Bst1107I | GTATAC | 1 cut(s) | 1825 |
| Bst2UI | CCWGG | 5 cut(s) | 1461, 1642, 1724, 2760, 3555 |
| Bst4CI | ACNGT | 7 cut(s) | 521, 579, 1038, 2212, 2441, 2731, 3572 |
| Bst6I | CTCTTC | 5 cut(s) | 505, 891, 899, 2304, 2780 |
| BstACI | GRCGYC | 1 cut(s) | 3409 |
| BstAFI | CTTAAG | 1 cut(s) | 1486 |
| BstAUI | TGTACA | 1 cut(s) | 3149 |
| BstBAI | YACGTR | 1 cut(s) | 3199 |
| BstBI | TTCGAA | 1 cut(s) | 26 |
| BstC8I | GCNNGC | 3 cut(s) | 474, 967, 3067 |
| BstDEI | CTNAG | 7 cut(s) | 204, 1502, 1706, 2041, 2174, 2261, 2801 |
| BstDSI | CCRYGG | 5 cut(s) | 2156, 3286, 3340, 3412, 3460 |
| BstFNI | CGCG | 2 cut(s) | 3414, 3462 |
| BstHHI | GCGC | 1 cut(s) | 1347 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 1342, 1425, 1636, 2455, 2544, 3010, 3417, 3513 |
| BstNI | CCWGG | 5 cut(s) | 1461, 1642, 1724, 2760, 3555 |
| BstNSI | RCATGY | 3 cut(s) | 125, 1149, 3392 |
| BstSCI | CCNGG | 8 cut(s) | 760, 1336, 1459, 1640, 1722, 2758, 3507, 3553 |
| BstSFI | CTRYAG | 5 cut(s) | 432, 648, 963, 2368, 2748 |
| BstSLI | GKGCMC | 2 cut(s) | 2217, 2717 |
| BstUI | CGCG | 2 cut(s) | 3414, 3462 |
| BstV1I | GCAGC | 6 cut(s) | 242, 895, 949, 1180, 2301, 2445 |
| BstV2I | GAAGAC | 3 cut(s) | 375, 1142, 2678 |
| BstX2I | RGATCY | 3 cut(s) | 112, 1456, 2984 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1723, 2085 |
| BstYI | RGATCY | 3 cut(s) | 112, 1456, 2984 |
| BstZ17I | GTATAC | 1 cut(s) | 1825 |
| Bsu15I | ATCGAT | 1 cut(s) | 1701 |
| BsuI | GTATCC | 1 cut(s) | 2498 |
| BsuRI | GGCC | 7 cut(s) | 66, 759, 1674, 3158, 3345, 3465, 3513 |
| BsuTUI | ATCGAT | 1 cut(s) | 1701 |
| BtgI | CCRYGG | 5 cut(s) | 2156, 3286, 3340, 3412, 3460 |
| BtrI | CACGTC | 1 cut(s) | 709 |
| BtsIMutI | CAGTG | 6 cut(s) | 212, 517, 2217, 2679, 2736, 2748 |
| BveI | ACCTGC | 2 cut(s) | 937, 1916 |
| Cac8I | GCNNGC | 3 cut(s) | 474, 967, 3067 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1036, 2747 |
| CfoI | GCGC | 1 cut(s) | 1347 |
| Cfr13I | GGNCC | 4 cut(s) | 758, 2130, 2790, 3511 |
| Cfr42I | CCGCGG | 2 cut(s) | 3415, 3463 |
| ClaI | ATCGAT | 1 cut(s) | 1701 |
| CseI | GACGC | 2 cut(s) | 2402, 3417 |
| CsiI | ACCWGGT | 1 cut(s) | 2758 |
| Csp6I | GTAC | 7 cut(s) | 125, 552, 681, 1326, 1412, 2007, 3150 |
| CviQI | GTAC | 7 cut(s) | 125, 552, 681, 1326, 1412, 2007, 3150 |
| DdeI | CTNAG | 7 cut(s) | 204, 1502, 1706, 2041, 2174, 2261, 2801 |
| DraI | TTTAAA | 1 cut(s) | 1587 |
| DraIII | CACNNNGTG | 1 cut(s) | 1285 |
| EaeI | YGGCCR | 2 cut(s) | 3343, 3463 |
| Eam1104I | CTCTTC | 5 cut(s) | 505, 891, 899, 2304, 2780 |
| EarI | CTCTTC | 5 cut(s) | 505, 891, 899, 2304, 2780 |
| EciI | GGCGGA | 1 cut(s) | 665 |
| Eco130I | CCWWGG | 4 cut(s) | 1846, 2156, 3286, 3340 |
| Eco147I | AGGCCT | 1 cut(s) | 3158 |
| Eco24I | GRGCYC | 1 cut(s) | 2628 |
| Eco31I | GGTCTC | 3 cut(s) | 2094, 2585, 3328 |
| Eco47I | GGWCC | 2 cut(s) | 2130, 2790 |
| Eco57I | CTGAAG | 7 cut(s) | 387, 872, 1061, 1749, 2330, 2851, 3197 |
| Eco72I | CACGTG | 1 cut(s) | 3199 |
| Eco88I | CYCGRG | 3 cut(s) | 270, 786, 2716 |
| EcoRI | GAATTC | 1 cut(s) | 2036 |
| EcoRII | CCWGG | 5 cut(s) | 1459, 1640, 1722, 2758, 3553 |
| EcoT14I | CCWWGG | 4 cut(s) | 1846, 2156, 3286, 3340 |
| EcoT22I | ATGCAT | 1 cut(s) | 2839 |
| EcoT38I | GRGCYC | 1 cut(s) | 2628 |
| ErhI | CCWWGG | 4 cut(s) | 1846, 2156, 3286, 3340 |
| Esp3I | CGTCTC | 2 cut(s) | 2291, 3400 |
| FaqI | GGGAC | 1 cut(s) | 632 |
| FauNDI | CATATG | 2 cut(s) | 1271, 1635 |
| FblI | GTMKAC | 1 cut(s) | 1824 |
| FriOI | GRGCYC | 1 cut(s) | 2628 |
| GlaI | GCGC | 1 cut(s) | 1346 |
| GsaI | CCCAGC | 1 cut(s) | 97 |
| GsuI | CTGGAG | 4 cut(s) | 762, 1482, 1596, 1663 |
| HaeIII | GGCC | 7 cut(s) | 66, 759, 1674, 3158, 3345, 3465, 3513 |
| HapII | CCGG | 6 cut(s) | 762, 1211, 1337, 1805, 2916, 3508 |
| HgaI | GACGC | 2 cut(s) | 2402, 3417 |
| HhaI | GCGC | 1 cut(s) | 1347 |
| Hin1I | GRCGYC | 1 cut(s) | 3409 |
| Hin6I | GCGC | 1 cut(s) | 1345 |
| HinP1I | GCGC | 1 cut(s) | 1345 |
| HincII | GTYRAC | 2 cut(s) | 661, 1441 |
| HindII | GTYRAC | 2 cut(s) | 661, 1441 |
| HindIII | AAGCTT | 3 cut(s) | 216, 1967, 3002 |
| HpaI | GTTAAC | 1 cut(s) | 1441 |
| HpaII | CCGG | 6 cut(s) | 762, 1211, 1337, 1805, 2916, 3508 |
| HphI | GGTGA | 2 cut(s) | 1376, 3302 |
| Hpy166II | GTNNAC | 9 cut(s) | 661, 998, 1441, 1756, 1825, 1894, 1962, 3293, 3383 |
| Hpy8I | GTNNAC | 9 cut(s) | 661, 998, 1441, 1756, 1825, 1894, 1962, 3293, 3383 |
| Hpy99I | CGWCG | 1 cut(s) | 710 |
| HpyCH4III | ACNGT | 7 cut(s) | 521, 579, 1038, 2212, 2441, 2731, 3572 |
| HpyCH4IV | ACGT | 4 cut(s) | 708, 1451, 2905, 3198 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 1342, 1425, 1636, 2455, 2544, 3010, 3417, 3513 |
| HpyF3I | CTNAG | 7 cut(s) | 204, 1502, 1706, 2041, 2174, 2261, 2801 |
| HpySE526I | ACGT | 4 cut(s) | 708, 1451, 2905, 3198 |
| Hsp92I | GRCGYC | 1 cut(s) | 3409 |
| HspAI | GCGC | 1 cut(s) | 1345 |
| Kpn2I | TCCGGA | 2 cut(s) | 1210, 1804 |
| KpnI | GGTACC | 1 cut(s) | 555 |
| KspAI | GTTAAC | 1 cut(s) | 1441 |
| KspI | CCGCGG | 2 cut(s) | 3415, 3463 |
| LguI | GCTCTTC | 2 cut(s) | 899, 2304 |
| LmnI | GCTCC | 8 cut(s) | 362, 678, 1463, 1627, 1644, 2000, 2682, 2841 |
| Lsp1109I | GCAGC | 6 cut(s) | 242, 895, 949, 1180, 2301, 2445 |
| LweI | GCATC | 7 cut(s) | 469, 1165, 1266, 1540, 2616, 2848, 3346 |
| MabI | ACCWGGT | 1 cut(s) | 2758 |
| MaeII | ACGT | 4 cut(s) | 708, 1451, 2905, 3198 |
| MaeIII | GTNAC | 4 cut(s) | 1577, 2743, 3391, 3542 |
| MfeI | CAATTG | 1 cut(s) | 2325 |
| MflI | RGATCY | 3 cut(s) | 112, 1456, 2984 |
| MhlI | GDGCHC | 5 cut(s) | 2217, 2483, 2628, 2679, 2717 |
| MlsI | TGGCCA | 1 cut(s) | 3345 |
| MluNI | TGGCCA | 1 cut(s) | 3345 |
| MlyI | GAGTC | 4 cut(s) | 489, 805, 1653, 3499 |
| MmeI | TCCRAC | 2 cut(s) | 1434, 1714 |
| Mox20I | TGGCCA | 1 cut(s) | 3345 |
| Mph1103I | ATGCAT | 1 cut(s) | 2839 |
| MroI | TCCGGA | 2 cut(s) | 1210, 1804 |
| MroXI | GAANNNNTTC | 3 cut(s) | 417, 885, 3375 |
| MscI | TGGCCA | 1 cut(s) | 3345 |
| Msp20I | TGGCCA | 1 cut(s) | 3345 |
| MspA1I | CMGCKG | 2 cut(s) | 3414, 3462 |
| MspCI | CTTAAG | 1 cut(s) | 1486 |
| MspI | CCGG | 6 cut(s) | 762, 1211, 1337, 1805, 2916, 3508 |
| MspR9I | CCNGG | 8 cut(s) | 762, 1338, 1461, 1642, 1724, 2760, 3509, 3555 |
| MunI | CAATTG | 1 cut(s) | 2325 |
| Mva1269I | GAATGC | 1 cut(s) | 969 |
| MvaI | CCWGG | 5 cut(s) | 1461, 1642, 1724, 2760, 3555 |
| MvnI | CGCG | 2 cut(s) | 3414, 3462 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 1342, 1425, 1636, 2455, 2544, 3010, 3417, 3513 |
| NciI | CCSGG | 3 cut(s) | 762, 1338, 3509 |
| NcoI | CCATGG | 3 cut(s) | 2156, 3286, 3340 |
| NdeI | CATATG | 2 cut(s) | 1271, 1635 |
| NlaIV | GGNNCC | 7 cut(s) | 114, 553, 674, 760, 1458, 2714, 3512 |
| NmuCI | GTSAC | 2 cut(s) | 2743, 3542 |
| NsiI | ATGCAT | 1 cut(s) | 2839 |
| NspI | RCATGY | 3 cut(s) | 125, 1149, 3392 |
| NspV | TTCGAA | 1 cut(s) | 26 |
| OliI | CACNNNNGTG | 1 cut(s) | 1362 |
| PaeR7I | CTCGAG | 1 cut(s) | 786 |
| PaqCI | CACCTGC | 1 cut(s) | 937 |
| PceI | AGGCCT | 1 cut(s) | 3158 |
| PciI | ACATGT | 2 cut(s) | 121, 3388 |
| PciSI | GCTCTTC | 2 cut(s) | 899, 2304 |
| PctI | GAATGC | 1 cut(s) | 969 |
| PdmI | GAANNNNTTC | 3 cut(s) | 417, 885, 3375 |
| PflFI | GACNNNGTC | 1 cut(s) | 2731 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1297 |
| PfoI | TCCNGGA | 2 cut(s) | 1459, 3553 |
| PleI | GAGTC | 4 cut(s) | 489, 805, 1653, 3498 |
| PmaCI | CACGTG | 1 cut(s) | 3199 |
| PmlI | CACGTG | 1 cut(s) | 3199 |
| PpsI | GAGTC | 4 cut(s) | 489, 805, 1653, 3498 |
| Ppu21I | YACGTR | 1 cut(s) | 3199 |
| PscI | ACATGT | 2 cut(s) | 121, 3388 |
| PsiI | TTATAA | 2 cut(s) | 147, 779 |
| Psp1406I | AACGTT | 2 cut(s) | 1451, 2905 |
| Psp6I | CCWGG | 5 cut(s) | 1459, 1640, 1722, 2758, 3553 |
| PspCI | CACGTG | 1 cut(s) | 3199 |
| PspFI | CCCAGC | 1 cut(s) | 93 |
| PspGI | CCWGG | 5 cut(s) | 1459, 1640, 1722, 2758, 3553 |
| PspN4I | GGNNCC | 7 cut(s) | 114, 553, 674, 760, 1458, 2714, 3512 |
| PspPI | GGNCC | 4 cut(s) | 758, 2130, 2790, 3511 |
| PstI | CTGCAG | 3 cut(s) | 967, 2372, 2752 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1036, 2747 |
| PsuI | RGATCY | 3 cut(s) | 112, 1456, 2984 |
| PsyI | GACNNNGTC | 1 cut(s) | 2731 |
| RsaI | GTAC | 7 cut(s) | 126, 553, 682, 1327, 1413, 2008, 3151 |
| RsaNI | GTAC | 7 cut(s) | 125, 552, 681, 1326, 1412, 2007, 3150 |
| SacII | CCGCGG | 2 cut(s) | 3415, 3463 |
| SapI | GCTCTTC | 2 cut(s) | 899, 2304 |
| Sau96I | GGNCC | 4 cut(s) | 758, 2130, 2790, 3511 |
| ScaI | AGTACT | 2 cut(s) | 1327, 2008 |
| SchI | GAGTC | 4 cut(s) | 489, 805, 1653, 3499 |
| ScrFI | CCNGG | 8 cut(s) | 762, 1338, 1461, 1642, 1724, 2760, 3509, 3555 |
| SduI | GDGCHC | 5 cut(s) | 2217, 2483, 2628, 2679, 2717 |
| SexAI | ACCWGGT | 1 cut(s) | 2758 |
| SfaNI | GCATC | 7 cut(s) | 469, 1165, 1266, 1540, 2616, 2848, 3346 |
| SfcI | CTRYAG | 5 cut(s) | 432, 648, 963, 2368, 2748 |
| Sfr274I | CTCGAG | 1 cut(s) | 786 |
| Sfr303I | CCGCGG | 2 cut(s) | 3415, 3463 |
| SfuI | TTCGAA | 1 cut(s) | 26 |
| SgrBI | CCGCGG | 2 cut(s) | 3415, 3463 |
| SinI | GGWCC | 2 cut(s) | 2130, 2790 |
| SlaI | CTCGAG | 1 cut(s) | 786 |
| SmlI | CTYRAG | 7 cut(s) | 786, 1486, 1652, 1682, 2417, 2627, 2723 |
| SmoI | CTYRAG | 7 cut(s) | 786, 1486, 1652, 1682, 2417, 2627, 2723 |
| SpeI | ACTAGT | 2 cut(s) | 817, 3434 |
| SseBI | AGGCCT | 1 cut(s) | 3158 |
| SsiI | CCGC | 8 cut(s) | 373, 676, 2656, 3412, 3414, 3460, 3462, 3514 |
| SspI | AATATT | 1 cut(s) | 2998 |
| StuI | AGGCCT | 1 cut(s) | 3158 |
| StyD4I | CCNGG | 8 cut(s) | 760, 1336, 1459, 1640, 1722, 2758, 3507, 3553 |
| StyI | CCWWGG | 4 cut(s) | 1846, 2156, 3286, 3340 |
| TaaI | ACNGT | 7 cut(s) | 521, 579, 1038, 2212, 2441, 2731, 3572 |
| TaiI | ACGT | 4 cut(s) | 711, 1454, 2908, 3201 |
| TaqI | TCGA | 7 cut(s) | 26, 45, 57, 643, 787, 1701, 2147 |
| TaqII | GACCGA | 1 cut(s) | 2807 |
| TatI | WGTACW | 4 cut(s) | 1325, 1411, 2006, 3149 |
| TauI | GCSGC | 4 cut(s) | 2659, 3414, 3465, 3516 |
| TscAI | CASTG | 6 cut(s) | 212, 524, 2217, 2679, 2736, 2748 |
| TseFI | GTSAC | 2 cut(s) | 2743, 3542 |
| TseI | GCWGC | 6 cut(s) | 230, 908, 962, 1193, 2314, 2458 |
| Tsp45I | GTSAC | 2 cut(s) | 2743, 3542 |
| TspGWI | ACGGA | 3 cut(s) | 206, 507, 1304 |
| TspRI | CASTG | 6 cut(s) | 212, 524, 2217, 2679, 2736, 2748 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2731 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1297 |
| Vha464I | CTTAAG | 1 cut(s) | 1486 |
| VpaK11BI | GGWCC | 2 cut(s) | 2130, 2790 |
| XapI | RAATTY | 8 cut(s) | 384, 928, 936, 1981, 2036, 2140, 2952, 3365 |
| XbaI | TCTAGA | 1 cut(s) | 1534 |
| XceI | RCATGY | 3 cut(s) | 125, 1149, 3392 |
| XhoI | CTCGAG | 1 cut(s) | 786 |
| XmiI | GTMKAC | 1 cut(s) | 1824 |
| XmnI | GAANNNNTTC | 3 cut(s) | 417, 885, 3375 |
| ZrmI | AGTACT | 2 cut(s) | 1327, 2008 |
| Zsp2I | ATGCAT | 1 cut(s) | 2839 |