RESISTANCE protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 17 - 156 | 3.9e-42 | TIR domain |
| TIR_2 | PF13676 | 20 - 109 | 6.4e-11 | TIR domain |
| AAA_16 | PF13191 | 155 - 265 | 3.8e-06 | AAA ATPase domain |
| NB-ARC | PF00931 | 170 - 325 | 2.3e-16 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 387 - 456 | 7e-19 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 712 - 799 | 4.2e-08 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 779 - 867 | 2.6e-07 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 787 - 978 | 1.8e-14 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| C-JID | PF20160 | 1050 - 1246 | 4.6e-07 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 3796 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2208 |
| AccBSI | CCGCTC | 3 cut(s) | 154, 2016, 3169 |
| AccII | CGCG | 3 cut(s) | 1350, 1362, 3614 |
| AclI | AACGTT | 2 cut(s) | 376, 3333 |
| AclWI | GGATC | 8 cut(s) | 205, 208, 2172, 2799, 2949, 3199, 3315, 3447 |
| AcoI | YGGCCR | 1 cut(s) | 1673 |
| AcsI | RAATTY | 9 cut(s) | 1504, 2063, 2091, 2218, 2494, 3054, 3159, 3485, 3761 |
| AcuI | CTGAAG | 4 cut(s) | 55, 1395, 2330, 2459 |
| AfaI | GTAC | 3 cut(s) | 891, 1403, 1571 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 733, 2208, 3673 |
| AflII | CTTAAG | 2 cut(s) | 407, 2144 |
| AflIII | ACRYGT | 1 cut(s) | 301 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 402 |
| AjiI | CACGTC | 1 cut(s) | 818 |
| AjnI | CCWGG | 4 cut(s) | 1381, 1394, 1670, 3476 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2484, 2516 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1875, 1907 |
| Alw26I | GTCTC | 7 cut(s) | 389, 584, 1293, 1647, 2145, 2550, 3008 |
| AlwI | GGATC | 8 cut(s) | 205, 208, 2172, 2799, 2949, 3199, 3315, 3447 |
| AoxI | GGCC | 8 cut(s) | 3, 76, 174, 1345, 1673, 3342, 3648, 3748 |
| ApeKI | GCWGC | 5 cut(s) | 434, 603, 1031, 2679, 2876 |
| ApoI | RAATTY | 9 cut(s) | 1504, 2063, 2091, 2218, 2494, 3054, 3159, 3485, 3761 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1176, 1986 |
| AspA2I | CCTAGG | 1 cut(s) | 3113 |
| AspLEI | GCGC | 3 cut(s) | 1027, 3266, 3614 |
| AspS9I | GGNCC | 6 cut(s) | 77, 175, 636, 1345, 3498, 3621 |
| AsuC2I | CCSGG | 1 cut(s) | 1677 |
| AsuHPI | GGTGA | 4 cut(s) | 566, 1283, 3521, 3724 |
| AsuII | TTCGAA | 1 cut(s) | 2400 |
| AvaII | GGWCC | 3 cut(s) | 636, 3498, 3621 |
| AvrII | CCTAGG | 1 cut(s) | 3113 |
| AxyI | CCTNAGG | 1 cut(s) | 3668 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 315, 348 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 125, 157 |
| BbsI | GAAGAC | 1 cut(s) | 2447 |
| BbvCI | CCTCAGC | 1 cut(s) | 1785 |
| BbvI | GCAGC | 5 cut(s) | 446, 590, 1018, 2666, 2863 |
| BccI | CCATC | 6 cut(s) | 114, 240, 320, 1708, 2699, 2896 |
| BceAI | ACGGC | 2 cut(s) | 735, 750 |
| BciT130I | CCWGG | 4 cut(s) | 1383, 1396, 1672, 3478 |
| BcnI | CCSGG | 1 cut(s) | 1677 |
| BcoDI | GTCTC | 7 cut(s) | 389, 584, 1293, 1647, 2145, 2550, 3008 |
| BfaI | CTAG | 6 cut(s) | 861, 1637, 2289, 2834, 2864, 3114 |
| BfmI | CTRYAG | 3 cut(s) | 720, 1032, 2922 |
| BfrI | CTTAAG | 2 cut(s) | 407, 2144 |
| BfuAI | ACCTGC | 1 cut(s) | 3796 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3647 |
| BglII | AGATCT | 1 cut(s) | 1867 |
| BisI | GCNGC | 7 cut(s) | 435, 604, 1032, 1348, 2677, 2680, 2877 |
| BlnI | CCTAGG | 1 cut(s) | 3113 |
| BlsI | GCNGC | 7 cut(s) | 436, 605, 1033, 1349, 2678, 2681, 2878 |
| BmcAI | AGTACT | 1 cut(s) | 891 |
| Bme1390I | CCNGG | 5 cut(s) | 1383, 1396, 1672, 1677, 3478 |
| Bme18I | GGWCC | 3 cut(s) | 636, 3498, 3621 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 402 |
| BmgBI | CACGTC | 1 cut(s) | 818 |
| BmgT120I | GGNCC | 6 cut(s) | 77, 175, 636, 1345, 3498, 3621 |
| BmiI | GGNNCC | 4 cut(s) | 79, 637, 638, 2831 |
| BmrFI | CCNGG | 5 cut(s) | 1383, 1396, 1672, 1677, 3478 |
| BmrI | ACTGGG | 1 cut(s) | 1737 |
| BmuI | ACTGGG | 1 cut(s) | 1737 |
| BpiI | GAAGAC | 1 cut(s) | 2447 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3113, 3145 |
| BpmI | CTGGAG | 3 cut(s) | 900, 1739, 2918 |
| Bpu10I | CCTNAGC | 3 cut(s) | 835, 1045, 1785 |
| Bpu14I | TTCGAA | 1 cut(s) | 2400 |
| BpuMI | CCSGG | 1 cut(s) | 1677 |
| Bsa29I | ATCGAT | 1 cut(s) | 1016 |
| BsaBI | GATNNNNATC | 3 cut(s) | 144, 311, 2803 |
| BsaI | GGTCTC | 3 cut(s) | 1293, 2145, 3008 |
| BsaJI | CCNNGG | 4 cut(s) | 1613, 2086, 3113, 3476 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 873, 889, 903, 919, 2891, 2921 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 733, 2208, 3673 |
| Bse118I | RCCGGY | 1 cut(s) | 172 |
| Bse1I | ACTGG | 6 cut(s) | 279, 1743, 2166, 2685, 3154, 3623 |
| Bse21I | CCTNAGG | 1 cut(s) | 3668 |
| Bse8I | GATNNNNATC | 3 cut(s) | 144, 311, 2803 |
| BseBI | CCWGG | 4 cut(s) | 1383, 1396, 1672, 3478 |
| BseCI | ATCGAT | 1 cut(s) | 1016 |
| BseDI | CCNNGG | 4 cut(s) | 1613, 2086, 3113, 3476 |
| BseJI | GATNNNNATC | 3 cut(s) | 144, 311, 2803 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 733, 2208, 3673 |
| BseNI | ACTGG | 6 cut(s) | 279, 1743, 2166, 2685, 3154, 3623 |
| BseRI | GAGGAG | 4 cut(s) | 910, 915, 1138, 2620 |
| BseXI | GCAGC | 5 cut(s) | 446, 590, 1018, 2666, 2863 |
| BsgI | GTGCAG | 2 cut(s) | 2041, 2665 |
| Bsh1236I | CGCG | 3 cut(s) | 1350, 1362, 3614 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3369 |
| BshFI | GGCC | 8 cut(s) | 5, 78, 176, 1347, 1675, 3344, 3650, 3750 |
| BshVI | ATCGAT | 1 cut(s) | 1016 |
| BsiEI | CGRYCG | 1 cut(s) | 3369 |
| BsiSI | CCGG | 3 cut(s) | 173, 1676, 2827 |
| BslFI | GGGAC | 3 cut(s) | 649, 704, 1820 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 733, 2208, 3673 |
| BsmAI | GTCTC | 7 cut(s) | 389, 584, 1293, 1647, 2145, 2550, 3008 |
| BsmBI | CGTCTC | 1 cut(s) | 584 |
| BsmFI | GGGAC | 3 cut(s) | 649, 704, 1820 |
| BsmI | GAATGC | 3 cut(s) | 284, 982, 2438 |
| BsnI | GGCC | 8 cut(s) | 5, 78, 176, 1347, 1675, 3344, 3650, 3750 |
| Bso31I | GGTCTC | 3 cut(s) | 1293, 2145, 3008 |
| Bsp119I | TTCGAA | 1 cut(s) | 2400 |
| Bsp1407I | TGTACA | 1 cut(s) | 1401 |
| BspANI | GGCC | 8 cut(s) | 5, 78, 176, 1347, 1675, 3344, 3650, 3750 |
| BspDI | ATCGAT | 1 cut(s) | 1016 |
| BspFNI | CGCG | 3 cut(s) | 1350, 1362, 3614 |
| BspHI | TCATGA | 2 cut(s) | 2712, 3815 |
| BspLI | GGNNCC | 4 cut(s) | 79, 637, 638, 2831 |
| BspMAI | CTGCAG | 2 cut(s) | 1036, 2926 |
| BspMI | ACCTGC | 1 cut(s) | 3796 |
| BspPI | GGATC | 8 cut(s) | 205, 208, 2172, 2799, 2949, 3199, 3315, 3447 |
| BspQI | GCTCTTC | 3 cut(s) | 1371, 2466, 3408 |
| BspT104I | TTCGAA | 1 cut(s) | 2400 |
| BspTI | CTTAAG | 2 cut(s) | 407, 2144 |
| BspTNI | GGTCTC | 3 cut(s) | 1293, 2145, 3008 |
| BsrBI | CCGCTC | 3 cut(s) | 154, 2016, 3169 |
| BsrFI | RCCGGY | 1 cut(s) | 172 |
| BsrGI | TGTACA | 1 cut(s) | 1401 |
| BsrI | ACTGG | 6 cut(s) | 279, 1743, 2166, 2685, 3154, 3623 |
| BssAI | RCCGGY | 1 cut(s) | 172 |
| BssECI | CCNNGG | 4 cut(s) | 1613, 2086, 3113, 3476 |
| BssT1I | CCWWGG | 2 cut(s) | 1613, 3113 |
| Bst2UI | CCWGG | 4 cut(s) | 1383, 1396, 1672, 3478 |
| Bst4CI | ACNGT | 8 cut(s) | 328, 578, 728, 1762, 2002, 2087, 2558, 3467 |
| Bst6I | CTCTTC | 7 cut(s) | 16, 589, 1371, 1650, 2466, 3408, 3540 |
| BstAFI | CTTAAG | 2 cut(s) | 407, 2144 |
| BstAUI | TGTACA | 1 cut(s) | 1401 |
| BstBI | TTCGAA | 1 cut(s) | 2400 |
| BstC8I | GCNNGC | 7 cut(s) | 601, 1029, 1036, 2024, 3643, 3685, 3734 |
| BstDSI | CCRYGG | 1 cut(s) | 2086 |
| BstEII | GGTNACC | 1 cut(s) | 1271 |
| BstFNI | CGCG | 3 cut(s) | 1350, 1362, 3614 |
| BstHHI | GCGC | 3 cut(s) | 1027, 3266, 3614 |
| BstMAI | GTCTC | 7 cut(s) | 389, 584, 1293, 1647, 2145, 2550, 3008 |
| BstMCI | CGRYCG | 1 cut(s) | 3369 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 75, 1031, 1738, 3217, 3642, 3647, 3693, 3702 |
| BstNI | CCWGG | 4 cut(s) | 1383, 1396, 1672, 3478 |
| BstNSI | RCATGY | 3 cut(s) | 1031, 1194, 1854 |
| BstPI | GGTNACC | 1 cut(s) | 1271 |
| BstSCI | CCNGG | 5 cut(s) | 1381, 1394, 1670, 1675, 3476 |
| BstSFI | CTRYAG | 3 cut(s) | 720, 1032, 2922 |
| BstUI | CGCG | 3 cut(s) | 1350, 1362, 3614 |
| BstV1I | GCAGC | 5 cut(s) | 446, 590, 1018, 2666, 2863 |
| BstV2I | GAAGAC | 1 cut(s) | 2447 |
| BstX2I | RGATCY | 6 cut(s) | 1867, 2164, 2804, 3191, 3320, 3452 |
| BstYI | RGATCY | 6 cut(s) | 1867, 2164, 2804, 3191, 3320, 3452 |
| Bsu15I | ATCGAT | 1 cut(s) | 1016 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3668 |
| BsuRI | GGCC | 8 cut(s) | 5, 78, 176, 1347, 1675, 3344, 3650, 3750 |
| BsuTUI | ATCGAT | 1 cut(s) | 1016 |
| BtgI | CCRYGG | 1 cut(s) | 2086 |
| BtgZI | GCGATG | 1 cut(s) | 1171 |
| BtrI | CACGTC | 1 cut(s) | 818 |
| BtsI | GCAGTG | 1 cut(s) | 744 |
| BtsIMutI | CAGTG | 1 cut(s) | 744 |
| BveI | ACCTGC | 1 cut(s) | 3796 |
| Cac8I | GCNNGC | 7 cut(s) | 601, 1029, 1036, 2024, 3643, 3685, 3734 |
| CciI | TCATGA | 2 cut(s) | 2712, 3815 |
| CfoI | GCGC | 3 cut(s) | 1027, 3266, 3614 |
| Cfr10I | RCCGGY | 1 cut(s) | 172 |
| Cfr13I | GGNCC | 6 cut(s) | 77, 175, 636, 1345, 3498, 3621 |
| ClaI | ATCGAT | 1 cut(s) | 1016 |
| CseI | GACGC | 1 cut(s) | 392 |
| CsiI | ACCWGGT | 1 cut(s) | 1394 |
| Csp6I | GTAC | 3 cut(s) | 890, 1402, 1570 |
| CviQI | GTAC | 3 cut(s) | 890, 1402, 1570 |
| DraI | TTTAAA | 1 cut(s) | 2968 |
| DriI | GACNNNNNGTC | 1 cut(s) | 402 |
| EaeI | YGGCCR | 1 cut(s) | 1673 |
| Eam1104I | CTCTTC | 7 cut(s) | 16, 589, 1371, 1650, 2466, 3408, 3540 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 402 |
| EarI | CTCTTC | 7 cut(s) | 16, 589, 1371, 1650, 2466, 3408, 3540 |
| Eco130I | CCWWGG | 2 cut(s) | 1613, 3113 |
| Eco147I | AGGCCT | 1 cut(s) | 3650 |
| Eco31I | GGTCTC | 3 cut(s) | 1293, 2145, 3008 |
| Eco32I | GATATC | 3 cut(s) | 706, 1664, 2658 |
| Eco47I | GGWCC | 3 cut(s) | 636, 3498, 3621 |
| Eco57I | CTGAAG | 4 cut(s) | 55, 1395, 2330, 2459 |
| Eco81I | CCTNAGG | 1 cut(s) | 3668 |
| Eco91I | GGTNACC | 1 cut(s) | 1271 |
| EcoO109I | RGGNCCY | 2 cut(s) | 77, 636 |
| EcoO65I | GGTNACC | 1 cut(s) | 1271 |
| EcoRI | GAATTC | 3 cut(s) | 2063, 2091, 2218 |
| EcoRII | CCWGG | 4 cut(s) | 1381, 1394, 1670, 3476 |
| EcoRV | GATATC | 3 cut(s) | 706, 1664, 2658 |
| EcoT14I | CCWWGG | 2 cut(s) | 1613, 3113 |
| EcoT22I | ATGCAT | 1 cut(s) | 1326 |
| ErhI | CCWWGG | 2 cut(s) | 1613, 3113 |
| Esp3I | CGTCTC | 1 cut(s) | 584 |
| FaqI | GGGAC | 3 cut(s) | 649, 704, 1820 |
| FauI | CCCGC | 5 cut(s) | 95, 147, 1617, 1943, 2009 |
| FauNDI | CATATG | 2 cut(s) | 1737, 2816 |
| Fnu4HI | GCNGC | 7 cut(s) | 435, 604, 1032, 1348, 2677, 2680, 2877 |
| Fsp4HI | GCNGC | 7 cut(s) | 435, 604, 1032, 1348, 2677, 2680, 2877 |
| FspBI | CTAG | 6 cut(s) | 861, 1637, 2289, 2834, 2864, 3114 |
| GlaI | GCGC | 3 cut(s) | 1026, 3265, 3613 |
| GluI | GCNGC | 7 cut(s) | 435, 604, 1032, 1348, 2677, 2680, 2877 |
| GsuI | CTGGAG | 3 cut(s) | 900, 1739, 2918 |
| HaeIII | GGCC | 8 cut(s) | 5, 78, 176, 1347, 1675, 3344, 3650, 3750 |
| HapII | CCGG | 3 cut(s) | 173, 1676, 2827 |
| HgaI | GACGC | 1 cut(s) | 392 |
| HhaI | GCGC | 3 cut(s) | 1027, 3266, 3614 |
| Hin6I | GCGC | 3 cut(s) | 1025, 3264, 3612 |
| HinP1I | GCGC | 3 cut(s) | 1025, 3264, 3612 |
| HincII | GTYRAC | 2 cut(s) | 784, 2340 |
| HindII | GTYRAC | 2 cut(s) | 784, 2340 |
| HindIII | AAGCTT | 4 cut(s) | 668, 1994, 2536, 3209 |
| HpaII | CCGG | 3 cut(s) | 173, 1676, 2827 |
| HphI | GGTGA | 4 cut(s) | 566, 1283, 3521, 3724 |
| Hpy166II | GTNNAC | 8 cut(s) | 784, 1250, 1258, 1404, 1480, 2340, 2609, 3624 |
| Hpy8I | GTNNAC | 8 cut(s) | 784, 1250, 1258, 1404, 1480, 2340, 2609, 3624 |
| Hpy99I | CGWCG | 1 cut(s) | 2976 |
| HpyCH4III | ACNGT | 8 cut(s) | 328, 578, 728, 1762, 2002, 2087, 2558, 3467 |
| HpyCH4IV | ACGT | 9 cut(s) | 301, 376, 817, 1490, 2035, 2213, 2971, 3079, 3333 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 75, 1031, 1738, 3217, 3642, 3647, 3693, 3702 |
| HpySE526I | ACGT | 9 cut(s) | 301, 376, 817, 1490, 2035, 2213, 2971, 3079, 3333 |
| HspAI | GCGC | 3 cut(s) | 1025, 3264, 3612 |
| KflI | GGGWCCC | 1 cut(s) | 636 |
| LguI | GCTCTTC | 3 cut(s) | 1371, 2466, 3408 |
| LmnI | GCTCC | 4 cut(s) | 357, 518, 1125, 1822 |
| Lsp1109I | GCAGC | 5 cut(s) | 446, 590, 1018, 2666, 2863 |
| MabI | ACCWGGT | 1 cut(s) | 1394 |
| MaeI | CTAG | 6 cut(s) | 861, 1637, 2289, 2834, 2864, 3114 |
| MaeII | ACGT | 9 cut(s) | 301, 376, 817, 1490, 2035, 2213, 2971, 3079, 3333 |
| MaeIII | GTNAC | 7 cut(s) | 823, 1271, 2177, 2456, 2926, 3377, 3509 |
| MbiI | CCGCTC | 3 cut(s) | 154, 2016, 3169 |
| MfeI | CAATTG | 3 cut(s) | 1455, 2274, 2821 |
| MflI | RGATCY | 6 cut(s) | 1867, 2164, 2804, 3191, 3320, 3452 |
| MlyI | GAGTC | 6 cut(s) | 768, 1649, 1924, 2437, 2477, 2703 |
| MmeI | TCCRAC | 2 cut(s) | 2222, 3766 |
| Mph1103I | ATGCAT | 1 cut(s) | 1326 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1176, 1986 |
| MslI | CAYNNNNRTG | 3 cut(s) | 481, 1475, 3710 |
| MspA1I | CMGCKG | 2 cut(s) | 1263, 3384 |
| MspCI | CTTAAG | 2 cut(s) | 407, 2144 |
| MspI | CCGG | 3 cut(s) | 173, 1676, 2827 |
| MspR9I | CCNGG | 5 cut(s) | 1383, 1396, 1672, 1677, 3478 |
| MunI | CAATTG | 3 cut(s) | 1455, 2274, 2821 |
| Mva1269I | GAATGC | 3 cut(s) | 284, 982, 2438 |
| MvaI | CCWGG | 4 cut(s) | 1383, 1396, 1672, 3478 |
| MvnI | CGCG | 3 cut(s) | 1350, 1362, 3614 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 75, 1031, 1738, 3217, 3642, 3647, 3693, 3702 |
| NciI | CCSGG | 1 cut(s) | 1677 |
| NdeI | CATATG | 2 cut(s) | 1737, 2816 |
| NlaIV | GGNNCC | 4 cut(s) | 79, 637, 638, 2831 |
| NmuCI | GTSAC | 3 cut(s) | 1271, 3377, 3509 |
| NsiI | ATGCAT | 1 cut(s) | 1326 |
| NspI | RCATGY | 3 cut(s) | 1031, 1194, 1854 |
| NspV | TTCGAA | 1 cut(s) | 2400 |
| PaeI | GCATGC | 1 cut(s) | 1031 |
| PagI | TCATGA | 2 cut(s) | 2712, 3815 |
| PceI | AGGCCT | 1 cut(s) | 3650 |
| PciSI | GCTCTTC | 3 cut(s) | 1371, 2466, 3408 |
| PctI | GAATGC | 3 cut(s) | 284, 982, 2438 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1176, 1986 |
| PfeI | GAWTC | 9 cut(s) | 455, 473, 846, 1007, 2008, 2191, 2402, 2837, 2893 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2208 |
| PkrI | GCNGC | 7 cut(s) | 436, 605, 1033, 1349, 2678, 2681, 2878 |
| PleI | GAGTC | 6 cut(s) | 767, 1648, 1923, 2437, 2477, 2703 |
| PpsI | GAGTC | 6 cut(s) | 767, 1648, 1923, 2437, 2477, 2703 |
| PpuMI | RGGWCCY | 1 cut(s) | 636 |
| Psp1406I | AACGTT | 2 cut(s) | 376, 3333 |
| Psp5II | RGGWCCY | 1 cut(s) | 636 |
| Psp6I | CCWGG | 4 cut(s) | 1381, 1394, 1670, 3476 |
| PspEI | GGTNACC | 1 cut(s) | 1271 |
| PspGI | CCWGG | 4 cut(s) | 1381, 1394, 1670, 3476 |
| PspN4I | GGNNCC | 4 cut(s) | 79, 637, 638, 2831 |
| PspPI | GGNCC | 6 cut(s) | 77, 175, 636, 1345, 3498, 3621 |
| PspPPI | RGGWCCY | 1 cut(s) | 636 |
| PstI | CTGCAG | 2 cut(s) | 1036, 2926 |
| PsuI | RGATCY | 6 cut(s) | 1867, 2164, 2804, 3191, 3320, 3452 |
| PvuII | CAGCTG | 1 cut(s) | 3384 |
| RsaI | GTAC | 3 cut(s) | 891, 1403, 1571 |
| RsaNI | GTAC | 3 cut(s) | 890, 1402, 1570 |
| RseI | CAYNNNNRTG | 3 cut(s) | 481, 1475, 3710 |
| SapI | GCTCTTC | 3 cut(s) | 1371, 2466, 3408 |
| SatI | GCNGC | 7 cut(s) | 435, 604, 1032, 1348, 2677, 2680, 2877 |
| Sau96I | GGNCC | 6 cut(s) | 77, 175, 636, 1345, 3498, 3621 |
| ScaI | AGTACT | 1 cut(s) | 891 |
| SchI | GAGTC | 6 cut(s) | 768, 1649, 1924, 2437, 2477, 2703 |
| ScrFI | CCNGG | 5 cut(s) | 1383, 1396, 1672, 1677, 3478 |
| SexAI | ACCWGGT | 1 cut(s) | 1394 |
| SfcI | CTRYAG | 3 cut(s) | 720, 1032, 2922 |
| SfuI | TTCGAA | 1 cut(s) | 2400 |
| SinI | GGWCC | 3 cut(s) | 636, 3498, 3621 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 481, 1475, 3710 |
| SphI | GCATGC | 1 cut(s) | 1031 |
| SseBI | AGGCCT | 1 cut(s) | 3650 |
| SspI | AATATT | 3 cut(s) | 1176, 1924, 2984 |
| SspMI | CTAG | 6 cut(s) | 861, 1637, 2289, 2834, 2864, 3114 |
| StuI | AGGCCT | 1 cut(s) | 3650 |
| StyD4I | CCNGG | 5 cut(s) | 1381, 1394, 1670, 1675, 3476 |
| StyI | CCWWGG | 2 cut(s) | 1613, 3113 |
| TaaI | ACNGT | 8 cut(s) | 328, 578, 728, 1762, 2002, 2087, 2558, 3467 |
| TaiI | ACGT | 9 cut(s) | 304, 379, 820, 1493, 2038, 2216, 2974, 3082, 3336 |
| TaqI | TCGA | 8 cut(s) | 192, 244, 594, 1016, 1602, 2400, 2974, 3279 |
| TaqII | GACCGA | 1 cut(s) | 3383 |
| TatI | WGTACW | 2 cut(s) | 889, 1401 |
| TauI | GCSGC | 2 cut(s) | 1350, 2679 |
| TfiI | GAWTC | 9 cut(s) | 455, 473, 846, 1007, 2008, 2191, 2402, 2837, 2893 |
| TscAI | CASTG | 1 cut(s) | 744 |
| TseFI | GTSAC | 3 cut(s) | 1271, 3377, 3509 |
| TseI | GCWGC | 5 cut(s) | 434, 603, 1031, 2679, 2876 |
| Tsp45I | GTSAC | 3 cut(s) | 1271, 3377, 3509 |
| TspGWI | ACGGA | 3 cut(s) | 199, 505, 3121 |
| TspRI | CASTG | 1 cut(s) | 744 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2208 |
| Vha464I | CTTAAG | 2 cut(s) | 407, 2144 |
| VpaK11BI | GGWCC | 3 cut(s) | 636, 3498, 3621 |
| XapI | RAATTY | 9 cut(s) | 1504, 2063, 2091, 2218, 2494, 3054, 3159, 3485, 3761 |
| XbaI | TCTAGA | 2 cut(s) | 1636, 2863 |
| XceI | RCATGY | 3 cut(s) | 1031, 1194, 1854 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2205 |
| XmaJI | CCTAGG | 1 cut(s) | 3113 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1176, 1986 |
| XspI | CTAG | 6 cut(s) | 861, 1637, 2289, 2834, 2864, 3114 |
| ZrmI | AGTACT | 1 cut(s) | 891 |
| Zsp2I | ATGCAT | 1 cut(s) | 1326 |