Rorug05G0259100

Actin-binding domain of plant-specific actin-binding protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
29089000 .. 29097145
8146 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0259100.1

Sequence Viewer

Length: 2871 bp
ATGATAATACTACAACAAATGGGTCTTATGAGGACAAGTCGTTTCTTAGTTTTGGTTACTCTGCTTTGTGTTTCAGCTTTGATCAGCTCGGAGGAGAGAGTGATCACAGAAGAAGTGTTTCTCAGTAGACTAGTTGATCCAGCAACTGGAAAGATTGATGGAGATATGGCACAGCTGTTATGGGTACGTTGCAAGGTAGATTTAACCCATTTGGTGGAAACTATTCAAGATCTTCACTTATGGTTACCAGAGGAAACATCTAGTAGCGCAGATGAAATTAGTTCAAAAAGACAGTCACTGGAAGAAGAAAATGTGCAGAAACTTATTAGTGTCCTGCATCCTCAGGTGAAACAAACTCTTTCAGATTGTTTCAGAAAGAATAATCTCTTTTTCCGTGTCTCTGGAGAAGAGAATGCCTCCAAGATTTGGTATGCCAAGTATATTGAGTCCCTATTTCCCAGACCTGTTCCAAGAAGGAAAATGGGCAGTGAATTGCTCCAGACCTCTGCTGAGGTACCTTCTCCTGCCCCTGCACCAGGATCTTCTGAACTCAGTCCAGCATCATCCCCTGGTCCTGCACCTTCTGCTTCTAGCATTTCTAGGTCCTCGGGCCCTACTACTCCACAAGGATCATTTTTTCCTTCCGTGCCCCAAAATTCAAGTTCACAACCTTCAGTTAGTGAACCAGCTCCCAGCACCATTATACAGATAACTAAGAAAAAGACTGACCATAAACCAATTATCATTGCAGTTGTTGTAACTGCAACAGTGACATTTGTTGTTGCAGCAGTCTTCTTTTTATGCTGTACTAAAATCTGTAGGACACGGCGTAAAGATAGAAAAAATGATGAGAGCCCCCTTCTTAGCCTGAGTAAATCCGACTCTGGAGGTTCTTCTTACAAGTCTTATCCTTTGGAAAATTCAATAAAAGGAGAGAAGATTGAGCATCAATCATTGGAATTAGGATCCATTGGACGTGCATCCAAATCCCGGTATGAAGTGTATGAGGCATCCAGCAATGGGAACGGATGGATACCACCTCCTCCTGGAAGGCCTCCTAACGGACCGCCTCCTCTGAAGCCCCCTCCTGGCAGAGCAAATCCTCTCCCTCCTGAGCCACCTTCTTCTTTTAAGCCTCCTCCTGGCAGGGCGGGTCCTCCTCCAACCCCTCCGCCTCCTGTACCACCTCCCACTTTGAAACCATCTGGTGGTGCAGCCCCTCCCCCACCACCTCCAGCTCCTGGTCCTCGCCCCCCTCCACCTTCAGCTCCTGGTCCTCCTCCCCCACCACTTCCAAAGATTGGTGTACCTCCTCCTAGGCCACCTCCATCAATGCCTATAGGTTCTAAGCTAGCTCGACCTCCACCATTTGCACCAAAGCGTCCATCAAATGCTGCTTCGAGTGATGGCTCAGAGGCTGATGGTGATGCTCCTAAAACCAAGCTGAAGCCCTTTTTTTGGGATAAGGTTCTAGCAAACCCTGATCATTCAATGGTGTGGCATCAGATTAAATCAGGATCTTTCCAGTTTGATGAGAACATGATTGAATCTCTGTTTGGGTATAATGCTGGTGATAAAAACAAAAACGATCGCAAGAAAGAGTCTTCATCCCAAGATCCTACACCTCAGTTCATTCAACTTATTAATCCCAAAAAGGCACAGAATCTATCAATTCTTCTCCGAGCTTTGAATGTGACTATAGAAGAAGTCTGCGATGCAATTCGTGAAGGAAATGAGCTTCCCATTGAATTCGTTCAAACTTTGTTGAAGATGGCACCAACACAAGAAGAAGAACTAAAGCTCAGGGTGTTCGATGGTGCACTCTCTCAACTTGGGCCTGCTGAACGGTTCCTAAAAGGCTTAATCAACATCCCTTTTGCCTTTAAACGGTTGGAAGCCTTACTTTTTATGTGCACTCTTCAGGAGGAGGTCACCAACCTTAAAGAATCCTTTGCAACCTTAGAGGTTGCTTGCAAGGAACTCAGAAACAGCCGGCTTTTCCTCAAGCTTTTAGAAGCTGTTCTTAAAACTGGCAATCGCATGAATGATGGAACATTTCGTGGTGGTGCACAGGCATTTAAGCTGGACACACTCTTGAAATTGTCAGATGTAAAGGGAACAGATGGCAAGACAACTCTTTTGCACTTTGTTGTTCAGGAAATAATCCGCTCTGAGGGTGTGAGAGCTGCTCGTGCAGCAAAAGAGAACCGGAGTTTCTCTAGCGTCAAAACAGATGATCTCCTTGAGGAAACTTCCCATGACACAGAAGAGCACTATTGTAATCTTGGTCTGGAGAAAGTATCAGGTTTAAGCAATGAACTCGAGAATGTAAAAAAAGCATCAATTTTGGATGCTGATAGCTTAACAGGAACTGTTGCCAAACTTGGAAGTGCTCTGGTAAAAGCCCGAGATTTTCTGAACTCAGACATGAACAAGTCAGGGGAAGAAAGTGGTTTTCATGAAACACTGAAGAGTTTTGTGCAGAATGCTGATGTTGATATCAGGGGTCTCCGTGAGGAAGAAAAGAGAATCATGGCTCTGGTAAAGAGCACCGGAGACTATTTCCATGGGAATGCAGGGAAGGATGAGGGTTTGCATTTGTTTGTTGTTGTGCGGGATTTTTTAATAATTTTAGATAAGGTATGCAAAGAAGTGAGATTGAATCCAAAAAAGTTCACAAAGGTTCAGAAAAGGGAGGCACCTTCCTCTGATCCCCACCAGCCTCCTACAACGCCATCTGCCTCTGATCCCCACCAGCCTCCTTCTCCCGGTCTACGCCAGCCTCCTTTTCCAGATCTCCATCAGCGGCTTTTCCCGGCAATCAAGGATCGGCGCATGGACAATTCTAGCTCAGATGATGAAGGTCCATAG

Protein Analysis

956

Amino Acids

104.47

Weight (kDa)

8.59

Isoelectric Point (pI)

57.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FH2 PF02181 476 - 877 1.1e-109 Formin Homology 2 Domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000032)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20531 FvH4_1g22101 FvH4_1g26161 FvH4_2g06802 FvH4_2g07851 FvH4_2g07920 FvH4_2g11481 FvH4_2g14491 FvH4_2g14510 FvH4_3g02671 FvH4_3g10870 FvH4_3g16811 FvH4_3g18871 FvH4_3g20011 FvH4_3g29181 FvH4_3g30101 FvH4_3g33941 FvH4_4g08031 FvH4_4g10192 FvH4_4g20791 FvH4_5g02440 FvH4_5g03261 FvH4_5g15791 FvH4_5g22472 FvH4_5g23680 FvH4_5g26530 FvH4_5g26540 FvH4_5g30241 FvH4_5g32311 FvH4_5g38943 FvH4_6g05152 FvH4_6g10481 FvH4_6g14353 FvH4_6g17850 FvH4_6g19460 FvH4_6g23861 FvH4_6g30881 FvH4_6g31722 FvH4_6g40031 FvH4_6g46031 FvH4_6g49021 FvH4_7g12530 FvH4_7g15960
pyrus_communis pycom09g18450
rosa_chinensis RchiOBHm_Chr1g0341771 RchiOBHm_Chr1g0354791 RchiOBHm_Chr2g0095751 RchiOBHm_Chr5g0030691 RchiOBHm_Chr7g0181741 RchiOBHm_Chr7g0222721 RchiOBHm_Chr7g0243191
rosa_laevigata RLG00000001405 RLG00000001878 RLG00000002053 RLG00000002361 RLG00000003846 RLG00000012639 RLG00000013326 RLG00000014331 RLG00000017340 RLG00000017548 RLG00000018177 RLG00000018372 RLG00000019006 RLG00000019406 RLG00000019522 RLG00000019922 RLG00000020489 RLG00000022399 RLG00000023433 RLG00000027372 RLG00000028576 RLG00000028590 RLG00000028947 RLG00000032552 RLG00000033183 RLG00000033245 RLG00000033730 RLG00000034443 RLG00000034772 RLG00000036008
rosa_multiflora Rmu_co8029972.1_g000001 Rmu_co8044978.1_g000001 Rmu_co8338363.1_g000001 Rmu_co8426431.1_g000002 Rmu_co8457575.1_g000001 Rmu_sc0000010.1_g000025 Rmu_sc0000197.1_g000018 Rmu_sc0000220.1_g000009 Rmu_sc0000221.1_g000012 Rmu_sc0000258.1_g000002 Rmu_sc0000284.1_g000015 Rmu_sc0000303.1_g000021 Rmu_sc0000309.1_g000015 Rmu_sc0000317.1_g000017 Rmu_sc0000355.1_g000003 Rmu_sc0000376.1_g000035 Rmu_sc0000420.1_g000009 Rmu_sc0000493.1_g000019 Rmu_sc0000498.1_g000044 Rmu_sc0000540.1_g000015 Rmu_sc0000554.1_g000031 Rmu_sc0000577.1_g000004 Rmu_sc0000647.1_g000007 Rmu_sc0000703.1_g000002 Rmu_sc0000776.1_g000025 Rmu_sc0000924.1_g000044 Rmu_sc0000940.1_g000034 Rmu_sc0000940.1_g000036 Rmu_sc0000990.1_g000014 Rmu_sc0001004.1_g000018 Rmu_sc0001027.1_g000014 Rmu_sc0001059.1_g000004 Rmu_sc0001089.1_g000021 Rmu_sc0001118.1_g000013 Rmu_sc0001141.1_g000024 Rmu_sc0001154.1_g000002 Rmu_sc0001179.1_g000023 Rmu_sc0001230.1_g000014 Rmu_sc0001298.1_g000042 Rmu_sc0001306.1_g000030 Rmu_sc0001306.1_g000036 Rmu_sc0001341.1_g000007 Rmu_sc0001386.1_g000013 Rmu_sc0001461.1_g000019 Rmu_sc0001461.1_g000047 Rmu_sc0001476.1_g000013 Rmu_sc0001516.1_g000032 Rmu_sc0001780.1_g000007 Rmu_sc0001793.1_g000005 Rmu_sc0001911.1_g000013 Rmu_sc0001962.1_g000011 Rmu_sc0001986.1_g000004 Rmu_sc0002061.1_g000021 Rmu_sc0002119.1_g000024 Rmu_sc0002194.1_g000021 Rmu_sc0002284.1_g000019 Rmu_sc0002316.1_g000014 Rmu_sc0002322.1_g000006 Rmu_sc0002351.1_g000107 Rmu_sc0002387.1_g000008 Rmu_sc0002389.1_g000029 Rmu_sc0002507.1_g000001 Rmu_sc0002589.1_g000038 Rmu_sc0002638.1_g000041 Rmu_sc0002656.1_g000007 Rmu_sc0002882.1_g000030 Rmu_sc0002927.1_g000034 Rmu_sc0003024.1_g000020 Rmu_sc0003032.1_g000027 Rmu_sc0003069.1_g000025 Rmu_sc0003268.1_g000002 Rmu_sc0003296.1_g000007 Rmu_sc0003363.1_g000073 Rmu_sc0003527.1_g000017 Rmu_sc0003638.1_g000007 Rmu_sc0003669.1_g000007 Rmu_sc0003882.1_g000021 Rmu_sc0003941.1_g000004 Rmu_sc0003979.1_g000007 Rmu_sc0003983.1_g000007 Rmu_sc0003989.1_g000017 Rmu_sc0004016.1_g000003 Rmu_sc0004020.1_g000025 Rmu_sc0004094.1_g000016 Rmu_sc0004135.1_g000002 Rmu_sc0004154.1_g000014 Rmu_sc0004316.1_g000002 Rmu_sc0004316.1_g000015 Rmu_sc0004321.1_g000013 Rmu_sc0004467.1_g000005 Rmu_sc0004517.1_g000007 Rmu_sc0004642.1_g000012 Rmu_sc0004729.1_g000024 Rmu_sc0004757.1_g000018 Rmu_sc0004788.1_g000003 Rmu_sc0004835.1_g000026 Rmu_sc0004889.1_g000019 Rmu_sc0004991.1_g000009 Rmu_sc0005045.1_g000004 Rmu_sc0005079.1_g000004 Rmu_sc0005083.1_g000008 Rmu_sc0005170.1_g000002 Rmu_sc0005190.1_g000009 Rmu_sc0005217.1_g000010 Rmu_sc0005234.1_g000011 Rmu_sc0005608.1_g000016 Rmu_sc0005802.1_g000029 Rmu_sc0005810.1_g000006 Rmu_sc0005904.1_g000006 Rmu_sc0005967.1_g000012 Rmu_sc0006028.1_g000027 Rmu_sc0006059.1_g000040 Rmu_sc0006423.1_g000002 Rmu_sc0006467.1_g000001 Rmu_sc0006470.1_g000004 Rmu_sc0006598.1_g000003 Rmu_sc0006599.1_g000004 Rmu_sc0006632.1_g000021 Rmu_sc0006707.1_g000008 Rmu_sc0006791.1_g000008 Rmu_sc0006835.1_g000016 Rmu_sc0007100.1_g000002 Rmu_sc0007115.1_g000009 Rmu_sc0007362.1_g000012 Rmu_sc0007461.1_g000004 Rmu_sc0007474.1_g000001 Rmu_sc0007681.1_g000011 Rmu_sc0007697.1_g000003 Rmu_sc0007704.1_g000001 Rmu_sc0007722.1_g000016 Rmu_sc0007843.1_g000001 Rmu_sc0007856.1_g000009 Rmu_sc0008328.1_g000007 Rmu_sc0008780.1_g000005 Rmu_sc0009185.1_g000011 Rmu_sc0009599.1_g000021 Rmu_sc0009881.1_g000002 Rmu_sc0009891.1_g000002 Rmu_sc0010357.1_g000003 Rmu_sc0010781.1_g000005 Rmu_sc0011133.1_g000005 Rmu_sc0012334.1_g000001 Rmu_sc0012569.1_g000015 Rmu_sc0012984.1_g000001 Rmu_sc0013508.1_g000001 Rmu_sc0013550.1_g000005 Rmu_sc0013730.1_g000001 Rmu_sc0013945.1_g000001 Rmu_sc0013945.1_g000003 Rmu_sc0014005.1_g000005 Rmu_sc0014111.1_g000009 Rmu_sc0014111.1_g000010 Rmu_sc0014203.1_g000025 Rmu_sc0014839.1_g000002 Rmu_sc0015410.1_g000001 Rmu_sc0015513.1_g000003 Rmu_sc0015791.1_g000008 Rmu_sc0016657.1_g000004 Rmu_sc0017187.1_g000002 Rmu_sc0017400.1_g000001 Rmu_sc0017895.1_g000006 Rmu_sc0018221.1_g000008 Rmu_sc0018825.1_g000002 Rmu_sc0019047.1_g000001 Rmu_sc0019077.1_g000001 Rmu_sc0019171.1_g000001 Rmu_sc0019299.1_g000002 Rmu_sc0020342.1_g000008 Rmu_sc0020688.1_g000002 Rmu_sc0020688.1_g000003 Rmu_sc0021871.1_g000012 Rmu_sc0022925.1_g000001 Rmu_sc0023965.1_g000005 Rmu_sc0024968.1_g000001 Rmu_sc0024969.1_g000001 Rmu_sc0025035.1_g000002 Rmu_sc0025167.1_g000005 Rmu_sc0025567.1_g000001 Rmu_sc0026096.1_g000001 Rmu_sc0026586.1_g000001 Rmu_sc0028358.1_g000002 Rmu_sc0032171.1_g000001 Rmu_sc0034632.1_g000001 Rmu_sc0034633.1_g000001 Rmu_sc0035481.1_g000001 Rmu_sc0036303.1_g000001 Rmu_sc0039774.1_g000001 Rmu_sc0040023.1_g000002 Rmu_sc0040790.1_g000001 Rmu_sc0041574.1_g000001 Rmu_sc0042768.1_g000003 Rmu_ssc0000038.1_g000016 Rmu_ssc0000062.1_g000035 Rmu_ssc0000083.1_g000009 Rmu_ssc0000093.1_g000006 Rmu_ssc0000112.1_g000023 Rmu_ssc0000155.1_g000007 Rmu_ssc0000171.1_g000017 Rmu_ssc0000196.1_g000017 Rmu_ssc0000257.1_g000027 Rmu_ssc0000323.1_g000023 Rmu_ssc0000440.1_g000011 Rmu_ssc0000454.1_g000021 Rmu_ssc0000473.1_g000011
rosa_roxburghii Rroxscaffold_1G00014010 Rroxscaffold_1G00039470 Rroxscaffold_1G00045350 Rroxscaffold_2G00082440 Rroxscaffold_2G00096630 Rroxscaffold_2G00100560 Rroxscaffold_2G00102600 Rroxscaffold_2G00117720 Rroxscaffold_2G00120390 Rroxscaffold_2G00126010 Rroxscaffold_3G00220680 Rroxscaffold_3G00241760 Rroxscaffold_4G00309670 Rroxscaffold_4G00312380 Rroxscaffold_5G00339950 Rroxscaffold_5G00361980 Rroxscaffold_5G00370500 Rroxscaffold_5G00376480 Rroxscaffold_5G00384070 Rroxscaffold_6G00393690 Rroxscaffold_6G00396520 Rroxscaffold_6G00396850 Rroxscaffold_6G00404790 Rroxscaffold_7G00177690 Rroxscaffold_7G00178170 Rroxscaffold_7G00194330 Rroxscaffold_7G00197090 Rroxscaffold_9G00437910
rosa_rugosa Rorug01G0010100 Rorug01G0035300 Rorug01G0038600 Rorug01G0038700 Rorug01G0050300 Rorug01G0143800.1 Rorug01G0211700 Rorug01G0266600 Rorug01G0268800 Rorug01G0301200 Rorug02G0139800 Rorug02G0247100 Rorug02G0247100 Rorug02G0276800 Rorug02G0283300 Rorug02G0289800 Rorug02G0326700 Rorug02G0368100 Rorug02G0427000 Rorug02G0439100 Rorug02G0611200 Rorug02G0626600 Rorug03G0049100 Rorug03G0108000 Rorug03G0118600 Rorug03G0174300.1 Rorug03G0182300 Rorug03G0189800 Rorug03G0207000 Rorug03G0220700 Rorug03G0229400 Rorug03G0253700 Rorug03G0276500 Rorug03G0283300.1 Rorug03G0283500 Rorug03G0283600 Rorug03G0299600 Rorug04G0052200 Rorug04G0052300 Rorug04G0115800 Rorug04G0159700 Rorug04G0170900 Rorug04G0178100 Rorug04G0250800 Rorug04G0317200 Rorug04G0409500 Rorug05G0022500 Rorug05G0134900 Rorug05G0144800 Rorug05G0158200 Rorug05G0168300 Rorug05G0168400 Rorug05G0168600 Rorug05G0229800 Rorug05G0259100 Rorug05G0285700 Rorug05G0294600 Rorug05G0306400 Rorug05G0335300 Rorug05G0390100 Rorug05G0392900 Rorug05G0407100 Rorug05G0416600 Rorug05G0536900 Rorug05G0550300 Rorug06G0040900 Rorug06G0042800 Rorug06G0093000 Rorug06G0110700 Rorug06G0115600 Rorug06G0205700 Rorug07G0016900.1 Rorug07G0017000 Rorug07G0095200 Rorug07G0106400 Rorug07G0116400 Rorug07G0127300 Rorug07G0151100 Rorug07G0151200 Rorug07G0178200 Rorug07G0224300 Rorug07G0224400 Rorug07G0226400 Rorug07G0258200 Rorug07G0328000 RorugPtG0002700.1
rosa_samantha Rh1BG231600 Rh1BG235500 Rh1DG259300 Rh2AG044200 Rh2AG095600 Rh2AG164800 Rh2AG361400 Rh2AG370600 Rh2AG487800 Rh2AG620400 Rh2BG171900 Rh2BG244600 Rh2BG500300 Rh2CG189500 Rh2CG317600 Rh2CG374400 Rh2CG474300 Rh2DG170300 Rh2DG374800 Rh2DG511500 Rh3AG273400 Rh3AG331300 Rh3CG203900 Rh3CG222200 Rh3CG253800 Rh3CG269900 Rh3DG073800 Rh3DG208100 Rh3DG224000 Rh3DG265900 Rh4AG217200 Rh4BG076000 Rh4BG113200 Rh4BG240700 Rh4BG414300 Rh4CG266600 Rh4CG307600 Rh5BG088500 Rh5BG469000 Rh5CG284400 Rh5CG491200 Rh5CG557400 Rh5DG399000 Rh6AG457400 Rh6BG339800 Rh6BG443700 Rh6CG115400 Rh6CG471500 Rh6DG390100 Rh6DG457900 Rh7AG372100 Rh7AG429800 Rh7AG484600 Rh7BG176400 Rh7BG233900 Rh7BG244400 Rh7BG279800 Rh7BG285100 Rh7CG172200 Rh7CG390500 Rh7CG502600 Rh7CG518200 Rh7DG252500 Rh7DG294200 Rh7DG376400 Rh7DG390100
rosa_wichuraiana Rw0G001650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 514
AccB1I GGYRCC 3 cut(s) 514, 1774, 2698
AccB7I CCANNNNNTGG 6 cut(s) 146, 214, 426, 1208, 1241, 1301
AccBSI CCGCTC 1 cut(s) 2169
AccI GTMKAC 2 cut(s) 127, 2773
AciI CCGC 6 cut(s) 1067, 1151, 1172, 2167, 2614, 2806
AcsI RAATTY 3 cut(s) 655, 919, 1748
AcuI CTGAAG 6 cut(s) 657, 1097, 1248, 1466, 1904, 2489
AfaI GTAC 5 cut(s) 186, 516, 808, 1182, 1308
AhlI ACTAGT 1 cut(s) 130
AjiI CACGTC 1 cut(s) 977
AjnI CCWGG 7 cut(s) 535, 568, 1045, 1087, 1141, 1240, 1270
AjuI GAANNNNNNNTTGG 2 cut(s) 1539, 1571
Alw21I GWGCWC 6 cut(s) 1822, 1916, 2071, 2274, 2395, 2552
Alw26I GTCTC 3 cut(s) 403, 2513, 2550
Alw44I GTGCAC 3 cut(s) 1818, 1912, 2067
AlwNI CAGNNNCTG 6 cut(s) 146, 298, 1241, 1271, 1418, 2372
Ama87I CYCGRG 3 cut(s) 607, 2321, 2406
AoxI GGCC 4 cut(s) 610, 1052, 1319, 1835
ApaI GGGCCC 1 cut(s) 614
ApaLI GTGCAC 3 cut(s) 1818, 1912, 2067
ApeKI GCWGC 5 cut(s) 785, 1214, 1394, 2186, 2195
ApoI RAATTY 3 cut(s) 655, 919, 1748
ArsI GACNNNNNNTTYG 4 cut(s) 278, 310, 2122, 2154
AseI ATTAAT 1 cut(s) 1644
Asp700I GAANNNNTTC 4 cut(s) 117, 222, 1752, 2019
Asp718I GGTACC 1 cut(s) 514
AspA2I CCTAGG 1 cut(s) 1316
AspLEI GCGC 2 cut(s) 269, 2835
AsuC2I CCSGG 3 cut(s) 991, 2769, 2816
AsuHPI GGTGA 4 cut(s) 358, 1436, 1583, 1924
AsuNHI GCTAGC 1 cut(s) 1351
AvaI CYCGRG 3 cut(s) 607, 2321, 2406
AvaII GGWCC 7 cut(s) 572, 603, 1064, 1154, 1244, 1274, 2864
AvrII CCTAGG 1 cut(s) 1316
AxyI CCTNAGG 1 cut(s) 342
BaeGI GKGCMC 5 cut(s) 614, 651, 1822, 1916, 2071
BamHI GGATCC 1 cut(s) 965
BanI GGYRCC 3 cut(s) 514, 1774, 2698
BanII GRGCYC 2 cut(s) 614, 857
BauI CACGAG 1 cut(s) 2190
BbsI GAAGAC 2 cut(s) 784, 1596
Bbv12I GWGCWC 6 cut(s) 1822, 1916, 2071, 2274, 2395, 2552
BbvCI CCTCAGC 1 cut(s) 510
BbvI GCAGC 5 cut(s) 797, 1226, 1381, 2173, 2207
BceAI ACGGC 1 cut(s) 842
BcgI CGANNNNNNTGC 2 cut(s) 2302, 2336
BciT130I CCWGG 7 cut(s) 537, 570, 1047, 1089, 1143, 1242, 1272
BciVI GTATCC 1 cut(s) 1026
BclI TGATCA 3 cut(s) 81, 102, 1483
BcnI CCSGG 3 cut(s) 991, 2769, 2816
BcoDI GTCTC 3 cut(s) 403, 2513, 2550
BcuI ACTAGT 1 cut(s) 130
BfaI CTAG 9 cut(s) 131, 261, 591, 600, 1317, 1352, 1472, 2220, 2847
BfmI CTRYAG 3 cut(s) 817, 1338, 1698
BfuI GTATCC 1 cut(s) 1026
BglII AGATCT 2 cut(s) 229, 2794
BisI GCNGC 6 cut(s) 786, 1215, 1395, 2187, 2196, 2807
BlnI CCTAGG 1 cut(s) 1316
BlsI GCNGC 6 cut(s) 787, 1216, 1396, 2188, 2197, 2808
Bme18I GGWCC 7 cut(s) 572, 603, 1064, 1154, 1244, 1274, 2864
BmeT110I CYCGRG 3 cut(s) 607, 2321, 2406
BmgBI CACGTC 1 cut(s) 977
BmiI GGNNCC 7 cut(s) 516, 612, 967, 1155, 1776, 1850, 2700
BmtI GCTAGC 1 cut(s) 1355
BpiI GAAGAC 2 cut(s) 784, 1596
BplI GAGNNNNNCTC 4 cut(s) 401, 433, 2173, 2205
BpmI CTGGAG 5 cut(s) 423, 482, 906, 1218, 2312
Bpu10I CCTNAGC 3 cut(s) 510, 1113, 1802
BpuEI CTTGAG 2 cut(s) 1988, 2264
BpuMI CCSGG 3 cut(s) 991, 2769, 2816
BsaBI GATNNNNATC 1 cut(s) 2799
BsaI GGTCTC 1 cut(s) 2513
BsaJI CCNNGG 4 cut(s) 568, 606, 1316, 2566
BsaWI WCCGGW 2 cut(s) 2208, 2552
Bse118I RCCGGY 1 cut(s) 1992
Bse1I ACTGG 4 cut(s) 151, 303, 1525, 2035
Bse21I CCTNAGG 1 cut(s) 342
Bse3DI GCAATG 3 cut(s) 744, 1024, 2320
Bse8I GATNNNNATC 1 cut(s) 2799
BseBI CCWGG 7 cut(s) 537, 570, 1047, 1089, 1143, 1242, 1272
BseDI CCNNGG 4 cut(s) 568, 606, 1316, 2566
BseGI GGATG 9 cut(s) 337, 563, 980, 1010, 1034, 1607, 1869, 2356, 2590
BseJI GATNNNNATC 1 cut(s) 2799
BseMI GCAATG 3 cut(s) 744, 1024, 2320
BseNI ACTGG 4 cut(s) 151, 303, 1525, 2035
BseRI GAGGAG 8 cut(s) 107, 1032, 1062, 1128, 1149, 1269, 1302, 1940
BseSI GKGCMC 5 cut(s) 614, 651, 1822, 1916, 2071
BseXI GCAGC 5 cut(s) 797, 1226, 1381, 2173, 2207
BseYI CCCAGC 1 cut(s) 692
BsgI GTGCAG 6 cut(s) 335, 516, 561, 1233, 2214, 2501
Bsh1285I CGRYCG 1 cut(s) 1591
BshFI GGCC 4 cut(s) 612, 1054, 1321, 1837
BshNI GGYRCC 3 cut(s) 514, 1774, 2698
BsiEI CGRYCG 1 cut(s) 1591
BsiHKAI GWGCWC 6 cut(s) 1822, 1916, 2071, 2274, 2395, 2552
BsiHKCI CYCGRG 3 cut(s) 607, 2321, 2406
BsiSI CCGG 6 cut(s) 991, 1993, 2209, 2553, 2769, 2816
BslFI GGGAC 1 cut(s) 433
BsmAI GTCTC 3 cut(s) 403, 2513, 2550
BsmFI GGGAC 1 cut(s) 433
BsmI GAATGC 3 cut(s) 418, 2491, 2578
BsnI GGCC 4 cut(s) 612, 1054, 1321, 1837
Bso31I GGTCTC 1 cut(s) 2513
BsoBI CYCGRG 3 cut(s) 607, 2321, 2406
Bsp120I GGGCCC 1 cut(s) 610
Bsp1286I GDGCHC 9 cut(s) 614, 651, 857, 1822, 1916, 2071, 2274, 2395, 2552
Bsp19I CCATGG 1 cut(s) 2566
BspACI CCGC 6 cut(s) 1067, 1151, 1172, 2167, 2614, 2806
BspANI GGCC 4 cut(s) 612, 1054, 1321, 1837
BspHI TCATGA 1 cut(s) 2458
BspLI GGNNCC 7 cut(s) 516, 612, 967, 1155, 1776, 1850, 2700
BspOI GCTAGC 1 cut(s) 1355
BspQI GCTCTTC 1 cut(s) 2262
BspT107I GGYRCC 3 cut(s) 514, 1774, 2698
BspTNI GGTCTC 1 cut(s) 2513
BsrBI CCGCTC 1 cut(s) 2169
BsrDI GCAATG 3 cut(s) 744, 1024, 2320
BsrFI RCCGGY 1 cut(s) 1992
BsrI ACTGG 4 cut(s) 151, 303, 1525, 2035
BssAI RCCGGY 1 cut(s) 1992
BssECI CCNNGG 4 cut(s) 568, 606, 1316, 2566
BssSI CACGAG 1 cut(s) 2190
BssT1I CCWWGG 2 cut(s) 1316, 2566
Bst2BI CACGAG 1 cut(s) 2190
Bst2UI CCWGG 7 cut(s) 537, 570, 1047, 1089, 1143, 1242, 1272
Bst4CI ACNGT 5 cut(s) 294, 769, 1848, 1890, 2374
Bst6I CTCTTC 4 cut(s) 402, 1923, 2262, 2465
BstAPI GCANNNNNTGC 1 cut(s) 584
BstC8I GCNNGC 5 cut(s) 1353, 1839, 1972, 1994, 2780
BstDSI CCRYGG 1 cut(s) 2566
BstEII GGTNACC 2 cut(s) 243, 1930
BstENI CCTNNNNNAGG 1 cut(s) 534
BstF5I GGATG 9 cut(s) 337, 563, 980, 1010, 1034, 1607, 1869, 2356, 2590
BstHHI GCGC 2 cut(s) 269, 2835
BstMAI GTCTC 3 cut(s) 403, 2513, 2550
BstMCI CGRYCG 1 cut(s) 1591
BstMWI GCNNNNNNNGC 3 cut(s) 584, 2192, 2195
BstNI CCWGG 7 cut(s) 537, 570, 1047, 1089, 1143, 1242, 1272
BstPI GGTNACC 2 cut(s) 243, 1930
BstSFI CTRYAG 3 cut(s) 817, 1338, 1698
BstSLI GKGCMC 5 cut(s) 614, 651, 1822, 1916, 2071
BstV1I GCAGC 5 cut(s) 797, 1226, 1381, 2173, 2207
BstV2I GAAGAC 2 cut(s) 784, 1596
BstX2I RGATCY 6 cut(s) 229, 539, 965, 1517, 1615, 2794
BstYI RGATCY 6 cut(s) 229, 539, 965, 1517, 1615, 2794
Bsu36I CCTNAGG 1 cut(s) 342
BsuI GTATCC 1 cut(s) 1026
BsuRI GGCC 4 cut(s) 612, 1054, 1321, 1837
BtgI CCRYGG 1 cut(s) 2566
BtgZI GCGATG 1 cut(s) 1728
BtrI CACGTC 1 cut(s) 977
BtsCI GGATG 9 cut(s) 337, 563, 980, 1010, 1034, 1607, 1869, 2356, 2590
BtsI GCAGTG 1 cut(s) 493
BtsIMutI CAGTG 4 cut(s) 296, 493, 774, 2465
Cac8I GCNNGC 5 cut(s) 1353, 1839, 1972, 1994, 2780
CaiI CAGNNNCTG 6 cut(s) 146, 298, 1241, 1271, 1418, 2372
CciI TCATGA 1 cut(s) 2458
CfoI GCGC 2 cut(s) 269, 2835
Cfr10I RCCGGY 1 cut(s) 1992
CpoI CGGWCCG 1 cut(s) 1064
CseI GACGC 2 cut(s) 1370, 2212
Csp6I GTAC 5 cut(s) 185, 515, 807, 1181, 1307
CspI CGGWCCG 1 cut(s) 1064
CviAII CATG 8 cut(s) 1540, 2041, 2258, 2428, 2459, 2533, 2567, 2836
CviQI GTAC 5 cut(s) 185, 515, 807, 1181, 1307
DraI TTTAAA 1 cut(s) 1885
Eam1104I CTCTTC 4 cut(s) 402, 1923, 2262, 2465
EarI CTCTTC 4 cut(s) 402, 1923, 2262, 2465
EciI GGCGGA 1 cut(s) 1161
Eco130I CCWWGG 2 cut(s) 1316, 2566
Eco147I AGGCCT 1 cut(s) 1054
Eco24I GRGCYC 2 cut(s) 614, 857
Eco31I GGTCTC 1 cut(s) 2513
Eco32I GATATC 1 cut(s) 2500
Eco47I GGWCC 7 cut(s) 572, 603, 1064, 1154, 1244, 1274, 2864
Eco57I CTGAAG 6 cut(s) 657, 1097, 1248, 1466, 1904, 2489
Eco81I CCTNAGG 1 cut(s) 342
Eco88I CYCGRG 3 cut(s) 607, 2321, 2406
Eco91I GGTNACC 2 cut(s) 243, 1930
EcoNI CCTNNNNNAGG 1 cut(s) 534
EcoO109I RGGNCCY 3 cut(s) 603, 611, 1154
EcoO65I GGTNACC 2 cut(s) 243, 1930
EcoRI GAATTC 1 cut(s) 1748
EcoRII CCWGG 7 cut(s) 535, 568, 1045, 1087, 1141, 1240, 1270
EcoRV GATATC 1 cut(s) 2500
EcoT14I CCWWGG 2 cut(s) 1316, 2566
EcoT38I GRGCYC 2 cut(s) 614, 857
ErhI CCWWGG 2 cut(s) 1316, 2566
FaeI CATG 8 cut(s) 1543, 2044, 2261, 2431, 2462, 2536, 2570, 2839
FalI AAGNNNNNCTT 4 cut(s) 1887, 1919, 2007, 2039
FaqI GGGAC 1 cut(s) 433
FatI CATG 8 cut(s) 1539, 2040, 2257, 2427, 2458, 2532, 2566, 2835
FauI CCCGC 2 cut(s) 1144, 2607
FbaI TGATCA 3 cut(s) 81, 102, 1483
FblI GTMKAC 2 cut(s) 127, 2773
Fnu4HI GCNGC 6 cut(s) 786, 1215, 1395, 2187, 2196, 2807
FokI GGATG 9 cut(s) 324, 550, 967, 997, 1041, 1594, 1856, 2363, 2597
FriOI GRGCYC 2 cut(s) 614, 857
Fsp4HI GCNGC 6 cut(s) 786, 1215, 1395, 2187, 2196, 2807
FspBI CTAG 9 cut(s) 131, 261, 591, 600, 1317, 1352, 1472, 2220, 2847
GlaI GCGC 2 cut(s) 268, 2834
GluI GCNGC 6 cut(s) 786, 1215, 1395, 2187, 2196, 2807
GsaI CCCAGC 1 cut(s) 696
GsuI CTGGAG 5 cut(s) 423, 482, 906, 1218, 2312
HaeIII GGCC 4 cut(s) 612, 1054, 1321, 1837
HapII CCGG 6 cut(s) 991, 1993, 2209, 2553, 2769, 2816
HgaI GACGC 2 cut(s) 1370, 2212
HhaI GCGC 2 cut(s) 269, 2835
Hin1II CATG 8 cut(s) 1543, 2044, 2261, 2431, 2462, 2536, 2570, 2839
Hin6I GCGC 2 cut(s) 267, 2833
HinP1I GCGC 2 cut(s) 267, 2833
HindIII AAGCTT 1 cut(s) 2006
HinfI GANTC 8 cut(s) 446, 881, 1547, 1601, 1663, 1946, 2529, 2662
HpaII CCGG 6 cut(s) 991, 1993, 2209, 2553, 2769, 2816
HphI GGTGA 4 cut(s) 358, 1436, 1583, 1924
Hpy166II GTNNAC 9 cut(s) 128, 665, 683, 1307, 1820, 1914, 2069, 2676, 2774
Hpy8I GTNNAC 9 cut(s) 128, 665, 683, 1307, 1820, 1914, 2069, 2676, 2774
HpyCH4III ACNGT 5 cut(s) 294, 769, 1848, 1890, 2374
HpyCH4IV ACGT 2 cut(s) 187, 976
HpyF10VI GCNNNNNNNGC 3 cut(s) 584, 2192, 2195
HpySE526I ACGT 2 cut(s) 187, 976
Hsp92II CATG 8 cut(s) 1543, 2044, 2261, 2431, 2462, 2536, 2570, 2839
HspAI GCGC 2 cut(s) 267, 2833
KpnI GGTACC 1 cut(s) 518
KroI GCCGGC 1 cut(s) 1992
KroNI GCCGGC 1 cut(s) 1994
Ksp22I TGATCA 3 cut(s) 81, 102, 1483
LguI GCTCTTC 1 cut(s) 2262
LmnI GCTCC 5 cut(s) 501, 694, 1243, 1273, 1435
Lsp1109I GCAGC 5 cut(s) 797, 1226, 1381, 2173, 2207
MaeI CTAG 9 cut(s) 131, 261, 591, 600, 1317, 1352, 1472, 2220, 2847
MaeII ACGT 2 cut(s) 187, 976
MaeIII GTNAC 7 cut(s) 55, 243, 294, 757, 769, 1693, 1930
MbiI CCGCTC 1 cut(s) 2169
MflI RGATCY 6 cut(s) 229, 539, 965, 1517, 1615, 2794
MhlI GDGCHC 9 cut(s) 614, 651, 857, 1822, 1916, 2071, 2274, 2395, 2552
MlyI GAGTC 3 cut(s) 455, 875, 1610
MmeI TCCRAC 3 cut(s) 903, 1187, 1872
MroNI GCCGGC 1 cut(s) 1992
MroXI GAANNNNTTC 4 cut(s) 117, 222, 1752, 2019
MslI CAYNNNNRTG 1 cut(s) 2571
MspA1I CMGCKG 2 cut(s) 175, 2806
MspI CCGG 6 cut(s) 991, 1993, 2209, 2553, 2769, 2816
Mva1269I GAATGC 3 cut(s) 418, 2491, 2578
MvaI CCWGG 7 cut(s) 537, 570, 1047, 1089, 1143, 1242, 1272
MwoI GCNNNNNNNGC 3 cut(s) 584, 2192, 2195
NaeI GCCGGC 1 cut(s) 1994
NciI CCSGG 3 cut(s) 991, 2769, 2816
NcoI CCATGG 1 cut(s) 2566
NgoMIV GCCGGC 1 cut(s) 1992
NheI GCTAGC 1 cut(s) 1351
NlaIII CATG 8 cut(s) 1543, 2044, 2261, 2431, 2462, 2536, 2570, 2839
NlaIV GGNNCC 7 cut(s) 516, 612, 967, 1155, 1776, 1850, 2700
NmuCI GTSAC 4 cut(s) 294, 769, 1693, 1930
PaeR7I CTCGAG 1 cut(s) 2321
PagI TCATGA 1 cut(s) 2458
PceI AGGCCT 1 cut(s) 1054
PciSI GCTCTTC 1 cut(s) 2262
PctI GAATGC 3 cut(s) 418, 2491, 2578
PdiI GCCGGC 1 cut(s) 1994
PdmI GAANNNNTTC 4 cut(s) 117, 222, 1752, 2019
PfeI GAWTC 5 cut(s) 1547, 1663, 1946, 2529, 2662
PflMI CCANNNNNTGG 6 cut(s) 146, 214, 426, 1208, 1241, 1301
PfoI TCCNGGA 1 cut(s) 1045
PkrI GCNGC 6 cut(s) 787, 1216, 1396, 2188, 2197, 2808
Ple19I CGATCG 1 cut(s) 1591
PleI GAGTC 3 cut(s) 454, 875, 1609
PpsI GAGTC 3 cut(s) 454, 875, 1609
PpuMI RGGWCCY 2 cut(s) 603, 1154
PshBI ATTAAT 1 cut(s) 1644
Psp5II RGGWCCY 2 cut(s) 603, 1154
Psp6I CCWGG 7 cut(s) 535, 568, 1045, 1087, 1141, 1240, 1270
PspEI GGTNACC 2 cut(s) 243, 1930
PspFI CCCAGC 1 cut(s) 692
PspGI CCWGG 7 cut(s) 535, 568, 1045, 1087, 1141, 1240, 1270
PspN4I GGNNCC 7 cut(s) 516, 612, 967, 1155, 1776, 1850, 2700
PspOMI GGGCCC 1 cut(s) 610
PspPPI RGGWCCY 2 cut(s) 603, 1154
PstNI CAGNNNCTG 6 cut(s) 146, 298, 1241, 1271, 1418, 2372
PsuI RGATCY 6 cut(s) 229, 539, 965, 1517, 1615, 2794
PvuI CGATCG 1 cut(s) 1591
PvuII CAGCTG 1 cut(s) 175
RsaI GTAC 5 cut(s) 186, 516, 808, 1182, 1308
RsaNI GTAC 5 cut(s) 185, 515, 807, 1181, 1307
RseI CAYNNNNRTG 1 cut(s) 2571
Rsr2I CGGWCCG 1 cut(s) 1064
RsrII CGGWCCG 1 cut(s) 1064
SapI GCTCTTC 1 cut(s) 2262
SatI GCNGC 6 cut(s) 786, 1215, 1395, 2187, 2196, 2807
SchI GAGTC 3 cut(s) 455, 875, 1610
SduI GDGCHC 9 cut(s) 614, 651, 857, 1822, 1916, 2071, 2274, 2395, 2552
SfcI CTRYAG 3 cut(s) 817, 1338, 1698
Sfr274I CTCGAG 1 cut(s) 2321
SinI GGWCC 7 cut(s) 572, 603, 1064, 1154, 1244, 1274, 2864
SlaI CTCGAG 1 cut(s) 2321
SmiMI CAYNNNNRTG 1 cut(s) 2571
SmlI CTYRAG 3 cut(s) 2003, 2243, 2321
SmoI CTYRAG 3 cut(s) 2003, 2243, 2321
SpeI ACTAGT 1 cut(s) 130
SseBI AGGCCT 1 cut(s) 1054
SsiI CCGC 6 cut(s) 1067, 1151, 1172, 2167, 2614, 2806
SspMI CTAG 9 cut(s) 131, 261, 591, 600, 1317, 1352, 1472, 2220, 2847
StuI AGGCCT 1 cut(s) 1054
StyI CCWWGG 2 cut(s) 1316, 2566
TaaI ACNGT 5 cut(s) 294, 769, 1848, 1890, 2374
TaiI ACGT 2 cut(s) 190, 979
TaqI TCGA 4 cut(s) 1357, 1400, 1812, 2322
TatI WGTACW 1 cut(s) 806
TauI GCSGC 1 cut(s) 2809
TfiI GAWTC 5 cut(s) 1547, 1663, 1946, 2529, 2662
TscAI CASTG 4 cut(s) 303, 493, 774, 2472
TseFI GTSAC 4 cut(s) 294, 769, 1693, 1930
TseI GCWGC 5 cut(s) 785, 1214, 1394, 2186, 2195
Tsp45I GTSAC 4 cut(s) 294, 769, 1693, 1930
TspDTI ATGAA 9 cut(s) 288, 1011, 1596, 1621, 2057, 2331, 2444, 2447, 2475
TspGWI ACGGA 5 cut(s) 383, 634, 1041, 1077, 2501
TspRI CASTG 4 cut(s) 303, 493, 774, 2472
Van91I CCANNNNNTGG 6 cut(s) 146, 214, 426, 1208, 1241, 1301
VneI GTGCAC 3 cut(s) 1818, 1912, 2067
VpaK11BI GGWCC 7 cut(s) 572, 603, 1064, 1154, 1244, 1274, 2864
VspI ATTAAT 1 cut(s) 1644
XagI CCTNNNNNAGG 1 cut(s) 534
XapI RAATTY 3 cut(s) 655, 919, 1748
XhoI CTCGAG 1 cut(s) 2321
XmaJI CCTAGG 1 cut(s) 1316
XmiI GTMKAC 2 cut(s) 127, 2773
XmnI GAANNNNTTC 4 cut(s) 117, 222, 1752, 2019
XspI CTAG 9 cut(s) 131, 261, 591, 600, 1317, 1352, 1472, 2220, 2847
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.