Protein of unknown function (DUF2921)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ArgoN | PF16486 | 191 - 327 | 2.8e-23 | N-terminal domain of argonaute |
| ArgoL1 | PF08699 | 337 - 387 | 2.3e-11 | Argonaute linker 1 domain |
| PAZ | PF02170 | 393 - 514 | 7.2e-22 | PAZ domain |
| ArgoL2 | PF16488 | 532 - 577 | 5.6e-07 | Argonaute linker 2 domain |
| Piwi | PF02171 | 688 - 977 | 8.8e-93 | Piwi domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1142 |
| AccB1I | GGYRCC | 2 cut(s) | 400, 3010 |
| AccBSI | CCGCTC | 1 cut(s) | 2260 |
| AccII | CGCG | 1 cut(s) | 252 |
| AclWI | GGATC | 2 cut(s) | 321, 2120 |
| AcoI | YGGCCR | 5 cut(s) | 31, 253, 1015, 1366, 2163 |
| AcsI | RAATTY | 6 cut(s) | 483, 746, 1037, 1201, 1493, 2434 |
| AcuI | CTGAAG | 3 cut(s) | 2126, 2225, 2594 |
| AdeI | CACNNNGTG | 1 cut(s) | 1914 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 548, 1063, 1643, 2862, 2925 |
| AflII | CTTAAG | 1 cut(s) | 922 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1281 |
| AjiI | CACGTC | 1 cut(s) | 142 |
| AjnI | CCWGG | 9 cut(s) | 255, 1113, 1368, 1585, 2089, 2168, 2683, 2965, 3069 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1559, 1591, 2567, 2599 |
| Alw21I | GWGCWC | 4 cut(s) | 897, 2715, 2805, 2870 |
| Alw44I | GTGCAC | 2 cut(s) | 2711, 2866 |
| AlwI | GGATC | 2 cut(s) | 321, 2120 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2690 |
| ApaLI | GTGCAC | 2 cut(s) | 2711, 2866 |
| ApoI | RAATTY | 6 cut(s) | 483, 746, 1037, 1201, 1493, 2434 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1328, 1360 |
| AspLEI | GCGC | 1 cut(s) | 1164 |
| AspS9I | GGNCC | 7 cut(s) | 1118, 1634, 1715, 1879, 2047, 2172, 2276 |
| AsuHPI | GGTGA | 2 cut(s) | 788, 1765 |
| AvaII | GGWCC | 3 cut(s) | 1118, 1634, 1879 |
| AxyI | CCTNAGG | 2 cut(s) | 837, 1527 |
| BaeGI | GKGCMC | 2 cut(s) | 2715, 2870 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2393, 2426 |
| BalI | TGGCCA | 2 cut(s) | 1368, 2165 |
| BanI | GGYRCC | 2 cut(s) | 400, 3010 |
| BanII | GRGCYC | 1 cut(s) | 897 |
| BauI | CACGAG | 2 cut(s) | 948, 2394 |
| BbsI | GAAGAC | 2 cut(s) | 324, 399 |
| Bbv12I | GWGCWC | 4 cut(s) | 897, 2715, 2805, 2870 |
| BccI | CCATC | 9 cut(s) | 23, 767, 1358, 1625, 2155, 2344, 2421, 2513, 2618 |
| BceAI | ACGGC | 3 cut(s) | 18, 55, 166 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2627, 2661 |
| BciT130I | CCWGG | 9 cut(s) | 257, 1115, 1370, 1587, 2091, 2170, 2685, 2967, 3071 |
| BclI | TGATCA | 2 cut(s) | 271, 544 |
| BfaI | CTAG | 5 cut(s) | 1380, 1796, 1983, 2079, 2567 |
| BfmI | CTRYAG | 2 cut(s) | 2740, 2920 |
| BfrI | CTTAAG | 1 cut(s) | 922 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 39 |
| BglII | AGATCT | 1 cut(s) | 2569 |
| BmcAI | AGTACT | 2 cut(s) | 622, 920 |
| Bme1390I | CCNGG | 9 cut(s) | 257, 1115, 1370, 1587, 2091, 2170, 2685, 2967, 3071 |
| Bme18I | GGWCC | 3 cut(s) | 1118, 1634, 1879 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1281 |
| BmgBI | CACGTC | 1 cut(s) | 142 |
| BmgT120I | GGNCC | 7 cut(s) | 1118, 1634, 1715, 1879, 2047, 2172, 2276 |
| BmiI | GGNNCC | 8 cut(s) | 402, 1119, 1374, 1881, 2255, 2889, 2971, 3012 |
| BmrFI | CCNGG | 9 cut(s) | 257, 1115, 1370, 1587, 2091, 2170, 2685, 2967, 3071 |
| BmrI | ACTGGG | 2 cut(s) | 2169, 2401 |
| BmsI | GCATC | 3 cut(s) | 1537, 2647, 3005 |
| BmuI | ACTGGG | 2 cut(s) | 2169, 2401 |
| BpiI | GAAGAC | 2 cut(s) | 324, 399 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 379, 411 |
| BpmI | CTGGAG | 4 cut(s) | 486, 834, 2667, 2949 |
| BpuEI | CTTGAG | 1 cut(s) | 881 |
| BsaI | GGTCTC | 2 cut(s) | 301, 1966 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 85, 108, 115, 138, 344, 374, 2433, 2463 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 548, 1063, 1643, 2862, 2925 |
| Bse118I | RCCGGY | 1 cut(s) | 2250 |
| Bse21I | CCTNAGG | 2 cut(s) | 837, 1527 |
| BseBI | CCWGG | 9 cut(s) | 257, 1115, 1370, 1587, 2091, 2170, 2685, 2967, 3071 |
| BseGI | GGATG | 5 cut(s) | 1893, 2308, 2803, 2978, 3046 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 548, 1063, 1643, 2862, 2925 |
| BseMII | CTCAG | 5 cut(s) | 629, 828, 1155, 1713, 2412 |
| BseRI | GAGGAG | 8 cut(s) | 96, 129, 174, 183, 186, 2974, 2977, 2980 |
| BseSI | GKGCMC | 2 cut(s) | 2715, 2870 |
| BseYI | CCCAGC | 3 cut(s) | 260, 1732, 1836 |
| BsgI | GTGCAG | 2 cut(s) | 534, 2376 |
| Bsh1236I | CGCG | 1 cut(s) | 252 |
| Bsh1285I | CGRYCG | 2 cut(s) | 157, 1625 |
| BshNI | GGYRCC | 2 cut(s) | 400, 3010 |
| BsiEI | CGRYCG | 2 cut(s) | 157, 1625 |
| BsiHKAI | GWGCWC | 4 cut(s) | 897, 2715, 2805, 2870 |
| BsiSI | CCGG | 3 cut(s) | 398, 2251, 2495 |
| BslFI | GGGAC | 4 cut(s) | 1349, 1883, 2776, 2970 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 548, 1063, 1643, 2862, 2925 |
| BsmBI | CGTCTC | 1 cut(s) | 529 |
| BsmFI | GGGAC | 4 cut(s) | 1349, 1883, 2776, 2970 |
| BsmI | GAATGC | 2 cut(s) | 664, 1333 |
| Bso31I | GGTCTC | 2 cut(s) | 301, 1966 |
| Bsp1286I | GDGCHC | 4 cut(s) | 897, 2715, 2805, 2870 |
| Bsp143I | GATC | 9 cut(s) | 226, 271, 313, 544, 700, 1864, 2112, 2208, 2569 |
| BspCNI | CTCAG | 5 cut(s) | 628, 829, 1154, 1714, 2413 |
| BspFNI | CGCG | 1 cut(s) | 252 |
| BspLI | GGNNCC | 8 cut(s) | 402, 1119, 1374, 1881, 2255, 2889, 2971, 3012 |
| BspMAI | CTGCAG | 1 cut(s) | 2744 |
| BspPI | GGATC | 2 cut(s) | 321, 2120 |
| BspQI | GCTCTTC | 1 cut(s) | 1935 |
| BspT107I | GGYRCC | 2 cut(s) | 400, 3010 |
| BspTI | CTTAAG | 1 cut(s) | 922 |
| BspTNI | GGTCTC | 2 cut(s) | 301, 1966 |
| BsrBI | CCGCTC | 1 cut(s) | 2260 |
| BsrFI | RCCGGY | 1 cut(s) | 2250 |
| BssAI | RCCGGY | 1 cut(s) | 2250 |
| BssMI | GATC | 9 cut(s) | 226, 271, 313, 544, 700, 1864, 2112, 2208, 2569 |
| BssSI | CACGAG | 2 cut(s) | 948, 2394 |
| BssT1I | CCWWGG | 3 cut(s) | 323, 1057, 2758 |
| Bst2BI | CACGAG | 2 cut(s) | 948, 2394 |
| Bst2UI | CCWGG | 9 cut(s) | 257, 1115, 1370, 1587, 2091, 2170, 2685, 2967, 3071 |
| Bst6I | CTCTTC | 7 cut(s) | 7, 67, 304, 1935, 1969, 2553, 2570 |
| BstAFI | CTTAAG | 1 cut(s) | 922 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2198 |
| BstC8I | GCNNGC | 6 cut(s) | 380, 1166, 1834, 2275, 2373, 2771 |
| BstDEI | CTNAG | 9 cut(s) | 615, 837, 1141, 1388, 1450, 1504, 1527, 1722, 2421 |
| BstDSI | CCRYGG | 1 cut(s) | 2952 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1061, 2860 |
| BstF5I | GGATG | 5 cut(s) | 1893, 2308, 2803, 2978, 3046 |
| BstFNI | CGCG | 1 cut(s) | 252 |
| BstHHI | GCGC | 1 cut(s) | 1164 |
| BstKTI | GATC | 9 cut(s) | 229, 274, 316, 547, 703, 1867, 2115, 2211, 2572 |
| BstMBI | GATC | 9 cut(s) | 226, 271, 313, 544, 700, 1864, 2112, 2208, 2569 |
| BstMCI | CGRYCG | 2 cut(s) | 157, 1625 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 39, 183, 229, 316, 352, 452, 1838, 2198, 2354 |
| BstNI | CCWGG | 9 cut(s) | 257, 1115, 1370, 1587, 2091, 2170, 2685, 2967, 3071 |
| BstNSI | RCATGY | 2 cut(s) | 1168, 3065 |
| BstSCI | CCNGG | 9 cut(s) | 255, 1113, 1368, 1585, 2089, 2168, 2683, 2965, 3069 |
| BstSFI | CTRYAG | 2 cut(s) | 2740, 2920 |
| BstSLI | GKGCMC | 2 cut(s) | 2715, 2870 |
| BstUI | CGCG | 1 cut(s) | 252 |
| BstV2I | GAAGAC | 2 cut(s) | 324, 399 |
| BstX2I | RGATCY | 2 cut(s) | 2112, 2569 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1664 |
| BstYI | RGATCY | 2 cut(s) | 2112, 2569 |
| Bsu36I | CCTNAGG | 2 cut(s) | 837, 1527 |
| BtgI | CCRYGG | 1 cut(s) | 2952 |
| BtrI | CACGTC | 1 cut(s) | 142 |
| BtsCI | GGATG | 5 cut(s) | 1893, 2308, 2803, 2978, 3046 |
| BtsI | GCAGTG | 3 cut(s) | 239, 365, 2150 |
| Cac8I | GCNNGC | 6 cut(s) | 380, 1166, 1834, 2275, 2373, 2771 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2690 |
| CfoI | GCGC | 1 cut(s) | 1164 |
| Cfr10I | RCCGGY | 1 cut(s) | 2250 |
| Cfr13I | GGNCC | 7 cut(s) | 1118, 1634, 1715, 1879, 2047, 2172, 2276 |
| CseI | GACGC | 3 cut(s) | 461, 1975, 2149 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1707, 1742 |
| CviAII | CATG | 8 cut(s) | 1165, 1187, 1615, 1681, 1969, 2446, 2939, 3062 |
| DdeI | CTNAG | 9 cut(s) | 615, 837, 1141, 1388, 1450, 1504, 1527, 1722, 2421 |
| DpnI | GATC | 9 cut(s) | 228, 273, 315, 546, 702, 1866, 2114, 2210, 2571 |
| DpnII | GATC | 9 cut(s) | 226, 271, 313, 544, 700, 1864, 2112, 2208, 2569 |
| DraI | TTTAAA | 1 cut(s) | 1212 |
| DraIII | CACNNNGTG | 1 cut(s) | 1914 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1142 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1281 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1142 |
| EaeI | YGGCCR | 5 cut(s) | 31, 253, 1015, 1366, 2163 |
| Eam1104I | CTCTTC | 7 cut(s) | 7, 67, 304, 1935, 1969, 2553, 2570 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1281 |
| EarI | CTCTTC | 7 cut(s) | 7, 67, 304, 1935, 1969, 2553, 2570 |
| EciI | GGCGGA | 2 cut(s) | 93, 2880 |
| Ecl136II | GAGCTC | 1 cut(s) | 895 |
| Eco130I | CCWWGG | 3 cut(s) | 323, 1057, 2758 |
| Eco24I | GRGCYC | 1 cut(s) | 897 |
| Eco31I | GGTCTC | 2 cut(s) | 301, 1966 |
| Eco32I | GATATC | 1 cut(s) | 1426 |
| Eco47I | GGWCC | 3 cut(s) | 1118, 1634, 1879 |
| Eco53kI | GAGCTC | 1 cut(s) | 895 |
| Eco57I | CTGAAG | 3 cut(s) | 2126, 2225, 2594 |
| Eco81I | CCTNAGG | 2 cut(s) | 837, 1527 |
| EcoICRI | GAGCTC | 1 cut(s) | 895 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1061, 2860 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1118 |
| EcoRII | CCWGG | 9 cut(s) | 255, 1113, 1368, 1585, 2089, 2168, 2683, 2965, 3069 |
| EcoRV | GATATC | 1 cut(s) | 1426 |
| EcoT14I | CCWWGG | 3 cut(s) | 323, 1057, 2758 |
| EcoT38I | GRGCYC | 1 cut(s) | 897 |
| ErhI | CCWWGG | 3 cut(s) | 323, 1057, 2758 |
| Esp3I | CGTCTC | 1 cut(s) | 529 |
| FaeI | CATG | 8 cut(s) | 1168, 1190, 1618, 1684, 1972, 2449, 2942, 3065 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 773, 805, 905, 937, 1093, 1125, 2036, 2068 |
| FaqI | GGGAC | 4 cut(s) | 1349, 1883, 2776, 2970 |
| FatI | CATG | 8 cut(s) | 1164, 1186, 1614, 1680, 1968, 2445, 2938, 3061 |
| FauI | CCCGC | 1 cut(s) | 2265 |
| FauNDI | CATATG | 1 cut(s) | 769 |
| FbaI | TGATCA | 2 cut(s) | 271, 544 |
| FokI | GGATG | 5 cut(s) | 1880, 2295, 2810, 2965, 3053 |
| FriOI | GRGCYC | 1 cut(s) | 897 |
| FspBI | CTAG | 5 cut(s) | 1380, 1796, 1983, 2079, 2567 |
| GlaI | GCGC | 1 cut(s) | 1163 |
| GsaI | CCCAGC | 3 cut(s) | 264, 1736, 1840 |
| GsuI | CTGGAG | 4 cut(s) | 486, 834, 2667, 2949 |
| HapII | CCGG | 3 cut(s) | 398, 2251, 2495 |
| HgaI | GACGC | 3 cut(s) | 461, 1975, 2149 |
| HhaI | GCGC | 1 cut(s) | 1164 |
| Hin1II | CATG | 8 cut(s) | 1168, 1190, 1618, 1684, 1972, 2449, 2942, 3065 |
| Hin6I | GCGC | 1 cut(s) | 1162 |
| HinP1I | GCGC | 1 cut(s) | 1162 |
| HincII | GTYRAC | 6 cut(s) | 209, 341, 1678, 1771, 1990, 3067 |
| HindII | GTYRAC | 6 cut(s) | 209, 341, 1678, 1771, 1990, 3067 |
| HindIII | AAGCTT | 2 cut(s) | 899, 2219 |
| HpaII | CCGG | 3 cut(s) | 398, 2251, 2495 |
| HphI | GGTGA | 2 cut(s) | 788, 1765 |
| Hpy99I | CGWCG | 1 cut(s) | 455 |
| HpyCH4IV | ACGT | 3 cut(s) | 141, 2301, 2668 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 39, 183, 229, 316, 352, 452, 1838, 2198, 2354 |
| HpyF3I | CTNAG | 9 cut(s) | 615, 837, 1141, 1388, 1450, 1504, 1527, 1722, 2421 |
| HpySE526I | ACGT | 3 cut(s) | 141, 2301, 2668 |
| Hsp92II | CATG | 8 cut(s) | 1168, 1190, 1618, 1684, 1972, 2449, 2942, 3065 |
| HspAI | GCGC | 1 cut(s) | 1162 |
| Ksp22I | TGATCA | 2 cut(s) | 271, 544 |
| Kzo9I | GATC | 9 cut(s) | 226, 271, 313, 544, 700, 1864, 2112, 2208, 2569 |
| LguI | GCTCTTC | 1 cut(s) | 1935 |
| LmnI | GCTCC | 4 cut(s) | 352, 1531, 2259, 2455 |
| LweI | GCATC | 3 cut(s) | 1537, 2647, 3005 |
| MaeI | CTAG | 5 cut(s) | 1380, 1796, 1983, 2079, 2567 |
| MaeII | ACGT | 3 cut(s) | 141, 2301, 2668 |
| MalI | GATC | 9 cut(s) | 228, 273, 315, 546, 702, 1866, 2114, 2210, 2571 |
| MbiI | CCGCTC | 1 cut(s) | 2260 |
| MboI | GATC | 9 cut(s) | 226, 271, 313, 544, 700, 1864, 2112, 2208, 2569 |
| MflI | RGATCY | 2 cut(s) | 2112, 2569 |
| MhlI | GDGCHC | 4 cut(s) | 897, 2715, 2805, 2870 |
| MlsI | TGGCCA | 2 cut(s) | 1368, 2165 |
| MluNI | TGGCCA | 2 cut(s) | 1368, 2165 |
| MlyI | GAGTC | 4 cut(s) | 373, 1270, 2116, 2406 |
| MmeI | TCCRAC | 6 cut(s) | 452, 1310, 1470, 2425, 2630, 2841 |
| Mox20I | TGGCCA | 2 cut(s) | 1368, 2165 |
| MscI | TGGCCA | 2 cut(s) | 1368, 2165 |
| MseI | TTAA | 9 cut(s) | 642, 822, 923, 1041, 1100, 1211, 1253, 2019, 2304 |
| MslI | CAYNNNNRTG | 4 cut(s) | 597, 636, 1685, 2784 |
| Msp20I | TGGCCA | 2 cut(s) | 1368, 2165 |
| MspA1I | CMGCKG | 2 cut(s) | 934, 2348 |
| MspCI | CTTAAG | 1 cut(s) | 922 |
| MspI | CCGG | 3 cut(s) | 398, 2251, 2495 |
| MspR9I | CCNGG | 9 cut(s) | 257, 1115, 1370, 1587, 2091, 2170, 2685, 2967, 3071 |
| Mva1269I | GAATGC | 2 cut(s) | 664, 1333 |
| MvaI | CCWGG | 9 cut(s) | 257, 1115, 1370, 1587, 2091, 2170, 2685, 2967, 3071 |
| MvnI | CGCG | 1 cut(s) | 252 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 39, 183, 229, 316, 352, 452, 1838, 2198, 2354 |
| NdeI | CATATG | 1 cut(s) | 769 |
| NdeII | GATC | 9 cut(s) | 226, 271, 313, 544, 700, 1864, 2112, 2208, 2569 |
| NlaIII | CATG | 8 cut(s) | 1168, 1190, 1618, 1684, 1972, 2449, 2942, 3065 |
| NlaIV | GGNNCC | 8 cut(s) | 402, 1119, 1374, 1881, 2255, 2889, 2971, 3012 |
| NmeAIII | GCCGAG | 3 cut(s) | 976, 2626, 2972 |
| NmuCI | GTSAC | 8 cut(s) | 799, 871, 1273, 1753, 1784, 2137, 2177, 2744 |
| NspI | RCATGY | 2 cut(s) | 1168, 3065 |
| PaeI | GCATGC | 1 cut(s) | 1168 |
| PasI | CCCWGGG | 1 cut(s) | 1114 |
| PciSI | GCTCTTC | 1 cut(s) | 1935 |
| PctI | GAATGC | 2 cut(s) | 664, 1333 |
| PfeI | GAWTC | 7 cut(s) | 247, 370, 988, 1006, 1792, 2380, 2465 |
| PfoI | TCCNGGA | 1 cut(s) | 2683 |
| PleI | GAGTC | 4 cut(s) | 372, 1270, 2116, 2405 |
| PpsI | GAGTC | 4 cut(s) | 372, 1270, 2116, 2405 |
| PpuMI | RGGWCCY | 1 cut(s) | 1118 |
| Psp124BI | GAGCTC | 1 cut(s) | 897 |
| Psp5II | RGGWCCY | 1 cut(s) | 1118 |
| Psp6I | CCWGG | 9 cut(s) | 255, 1113, 1368, 1585, 2089, 2168, 2683, 2965, 3069 |
| PspFI | CCCAGC | 3 cut(s) | 260, 1732, 1836 |
| PspGI | CCWGG | 9 cut(s) | 255, 1113, 1368, 1585, 2089, 2168, 2683, 2965, 3069 |
| PspN4I | GGNNCC | 8 cut(s) | 402, 1119, 1374, 1881, 2255, 2889, 2971, 3012 |
| PspPI | GGNCC | 7 cut(s) | 1118, 1634, 1715, 1879, 2047, 2172, 2276 |
| PspPPI | RGGWCCY | 1 cut(s) | 1118 |
| PstI | CTGCAG | 1 cut(s) | 2744 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2690 |
| PsuI | RGATCY | 2 cut(s) | 2112, 2569 |
| PvuII | CAGCTG | 2 cut(s) | 934, 2348 |
| RseI | CAYNNNNRTG | 4 cut(s) | 597, 636, 1685, 2784 |
| SacI | GAGCTC | 1 cut(s) | 897 |
| SapI | GCTCTTC | 1 cut(s) | 1935 |
| SaqAI | TTAA | 9 cut(s) | 642, 822, 923, 1041, 1100, 1211, 1253, 2019, 2304 |
| Sau3AI | GATC | 9 cut(s) | 226, 271, 313, 544, 700, 1864, 2112, 2208, 2569 |
| Sau96I | GGNCC | 7 cut(s) | 1118, 1634, 1715, 1879, 2047, 2172, 2276 |
| ScaI | AGTACT | 2 cut(s) | 622, 920 |
| SchI | GAGTC | 4 cut(s) | 373, 1270, 2116, 2406 |
| ScrFI | CCNGG | 9 cut(s) | 257, 1115, 1370, 1587, 2091, 2170, 2685, 2967, 3071 |
| SduI | GDGCHC | 4 cut(s) | 897, 2715, 2805, 2870 |
| SfaNI | GCATC | 3 cut(s) | 1537, 2647, 3005 |
| SfcI | CTRYAG | 2 cut(s) | 2740, 2920 |
| SinI | GGWCC | 3 cut(s) | 1118, 1634, 1879 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 597, 636, 1685, 2784 |
| SmlI | CTYRAG | 2 cut(s) | 896, 922 |
| SmoI | CTYRAG | 2 cut(s) | 896, 922 |
| SphI | GCATGC | 1 cut(s) | 1168 |
| SspMI | CTAG | 5 cut(s) | 1380, 1796, 1983, 2079, 2567 |
| SstI | GAGCTC | 1 cut(s) | 897 |
| StyD4I | CCNGG | 9 cut(s) | 255, 1113, 1368, 1585, 2089, 2168, 2683, 2965, 3069 |
| StyI | CCWWGG | 3 cut(s) | 323, 1057, 2758 |
| TaiI | ACGT | 3 cut(s) | 144, 2304, 2671 |
| TaqI | TCGA | 3 cut(s) | 157, 373, 2432 |
| TaqII | GACCGA | 1 cut(s) | 283 |
| TatI | WGTACW | 4 cut(s) | 620, 918, 1431, 2898 |
| TauI | GCSGC | 9 cut(s) | 21, 189, 192, 220, 255, 1020, 1650, 2318, 2638 |
| TfiI | GAWTC | 7 cut(s) | 247, 370, 988, 1006, 1792, 2380, 2465 |
| Tru1I | TTAA | 9 cut(s) | 642, 822, 923, 1041, 1100, 1211, 1253, 2019, 2304 |
| Tru9I | TTAA | 9 cut(s) | 642, 822, 923, 1041, 1100, 1211, 1253, 2019, 2304 |
| TseFI | GTSAC | 8 cut(s) | 799, 871, 1273, 1753, 1784, 2137, 2177, 2744 |
| Tsp45I | GTSAC | 8 cut(s) | 799, 871, 1273, 1753, 1784, 2137, 2177, 2744 |
| TspGWI | ACGGA | 3 cut(s) | 81, 492, 2962 |
| Vha464I | CTTAAG | 1 cut(s) | 922 |
| VneI | GTGCAC | 2 cut(s) | 2711, 2866 |
| VpaK11BI | GGWCC | 3 cut(s) | 1118, 1634, 1879 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1061, 2860 |
| XapI | RAATTY | 6 cut(s) | 483, 746, 1037, 1201, 1493, 2434 |
| XbaI | TCTAGA | 1 cut(s) | 2078 |
| XceI | RCATGY | 2 cut(s) | 1168, 3065 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1833 |
| XspI | CTAG | 5 cut(s) | 1380, 1796, 1983, 2079, 2567 |
| ZrmI | AGTACT | 2 cut(s) | 622, 920 |