Rmu_sc0014839.1_g000002

Domain of unknown function (DUF4283)

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0014839.1
Physical Location & Seq
Forward (+)
2640 .. 3557
918 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0014839.1_g000002.1.cds

Sequence Viewer

Length: 918 bp
ctggtgaagaaaccggccttgctctacgatctgaaacattttttcaagcgagtttgggtcctcgataaggggttcaaagttcaagatagagcaccaaacaggtttgtccttgcttttgatttgcgcagggatcaaaacaaggtgttgaaaggagggcctttgagattcaatcaggctcctgttgtgcttcaagaatatgatggtgtttcccttattcatgagattgatttgacctcacttttcttctgggttcgaattggcaacataccatctatgtttgaagagcctgacatgatcaagatcattgcgttggtggctggtaagttccttgaaatggatgataaactctttgcgaatgttggcaaagttagggttcatgttgcacatgatatttcaaaacccttctttctcaagaaaaccctaaagcttgcacctcatgttgaagtcgaaatctcgtatttctttgagaaccttgtgggtaaatgtgatcattgcaacctgatctatcatgaaggggatcattgccctttactaggaagccatgcagcaccggttacaactagagggatgggtgatccaagagttgagattggacgtccttccctagggtttgttactaataattttgtggaagggattttcagatttcagggtgtgccatctgtgtgcagatctttatttcaatccactgggagcaataaaggtcgcaaaccgatcatcctacgtgagaaaaatatgaactccaagaagtctgaggaagtaccagatcaaacattggtgtcaactgtgtttgatgcatcggccaaaaatgatatagagcctgcaagccatgatctaggtacgtgcatgaaacttgtgaatgtgaatgaggatgtggttagtccaaatagcaatgccgaactggctcttaaggagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

305

Amino Acids

34.33

Weight (kDa)

8.51

Isoelectric Point (pI)

34.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000032)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20531 FvH4_1g22101 FvH4_1g26161 FvH4_2g06802 FvH4_2g07851 FvH4_2g07920 FvH4_2g11481 FvH4_2g14491 FvH4_2g14510 FvH4_3g02671 FvH4_3g10870 FvH4_3g16811 FvH4_3g18871 FvH4_3g20011 FvH4_3g29181 FvH4_3g30101 FvH4_3g33941 FvH4_4g08031 FvH4_4g10192 FvH4_4g20791 FvH4_5g02440 FvH4_5g03261 FvH4_5g15791 FvH4_5g22472 FvH4_5g23680 FvH4_5g26530 FvH4_5g26540 FvH4_5g30241 FvH4_5g32311 FvH4_5g38943 FvH4_6g05152 FvH4_6g10481 FvH4_6g14353 FvH4_6g17850 FvH4_6g19460 FvH4_6g23861 FvH4_6g30881 FvH4_6g31722 FvH4_6g40031 FvH4_6g46031 FvH4_6g49021 FvH4_7g12530 FvH4_7g15960
pyrus_communis pycom09g18450
rosa_chinensis RchiOBHm_Chr1g0341771 RchiOBHm_Chr1g0354791 RchiOBHm_Chr2g0095751 RchiOBHm_Chr5g0030691 RchiOBHm_Chr7g0181741 RchiOBHm_Chr7g0222721 RchiOBHm_Chr7g0243191
rosa_laevigata RLG00000001405 RLG00000001878 RLG00000002053 RLG00000002361 RLG00000003846 RLG00000012639 RLG00000013326 RLG00000014331 RLG00000017340 RLG00000017548 RLG00000018177 RLG00000018372 RLG00000019006 RLG00000019406 RLG00000019522 RLG00000019922 RLG00000020489 RLG00000022399 RLG00000023433 RLG00000027372 RLG00000028576 RLG00000028590 RLG00000028947 RLG00000032552 RLG00000033183 RLG00000033245 RLG00000033730 RLG00000034443 RLG00000034772 RLG00000036008
rosa_multiflora Rmu_co8029972.1_g000001 Rmu_co8044978.1_g000001 Rmu_co8338363.1_g000001 Rmu_co8426431.1_g000002 Rmu_co8457575.1_g000001 Rmu_sc0000010.1_g000025 Rmu_sc0000197.1_g000018 Rmu_sc0000220.1_g000009 Rmu_sc0000221.1_g000012 Rmu_sc0000258.1_g000002 Rmu_sc0000284.1_g000015 Rmu_sc0000303.1_g000021 Rmu_sc0000309.1_g000015 Rmu_sc0000317.1_g000017 Rmu_sc0000355.1_g000003 Rmu_sc0000376.1_g000035 Rmu_sc0000420.1_g000009 Rmu_sc0000493.1_g000019 Rmu_sc0000498.1_g000044 Rmu_sc0000540.1_g000015 Rmu_sc0000554.1_g000031 Rmu_sc0000577.1_g000004 Rmu_sc0000647.1_g000007 Rmu_sc0000703.1_g000002 Rmu_sc0000776.1_g000025 Rmu_sc0000924.1_g000044 Rmu_sc0000940.1_g000034 Rmu_sc0000940.1_g000036 Rmu_sc0000990.1_g000014 Rmu_sc0001004.1_g000018 Rmu_sc0001027.1_g000014 Rmu_sc0001059.1_g000004 Rmu_sc0001089.1_g000021 Rmu_sc0001118.1_g000013 Rmu_sc0001141.1_g000024 Rmu_sc0001154.1_g000002 Rmu_sc0001179.1_g000023 Rmu_sc0001230.1_g000014 Rmu_sc0001298.1_g000042 Rmu_sc0001306.1_g000030 Rmu_sc0001306.1_g000036 Rmu_sc0001341.1_g000007 Rmu_sc0001386.1_g000013 Rmu_sc0001461.1_g000019 Rmu_sc0001461.1_g000047 Rmu_sc0001476.1_g000013 Rmu_sc0001516.1_g000032 Rmu_sc0001780.1_g000007 Rmu_sc0001793.1_g000005 Rmu_sc0001911.1_g000013 Rmu_sc0001962.1_g000011 Rmu_sc0001986.1_g000004 Rmu_sc0002061.1_g000021 Rmu_sc0002119.1_g000024 Rmu_sc0002194.1_g000021 Rmu_sc0002284.1_g000019 Rmu_sc0002316.1_g000014 Rmu_sc0002322.1_g000006 Rmu_sc0002351.1_g000107 Rmu_sc0002387.1_g000008 Rmu_sc0002389.1_g000029 Rmu_sc0002507.1_g000001 Rmu_sc0002589.1_g000038 Rmu_sc0002638.1_g000041 Rmu_sc0002656.1_g000007 Rmu_sc0002882.1_g000030 Rmu_sc0002927.1_g000034 Rmu_sc0003024.1_g000020 Rmu_sc0003032.1_g000027 Rmu_sc0003069.1_g000025 Rmu_sc0003268.1_g000002 Rmu_sc0003296.1_g000007 Rmu_sc0003363.1_g000073 Rmu_sc0003527.1_g000017 Rmu_sc0003638.1_g000007 Rmu_sc0003669.1_g000007 Rmu_sc0003882.1_g000021 Rmu_sc0003941.1_g000004 Rmu_sc0003979.1_g000007 Rmu_sc0003983.1_g000007 Rmu_sc0003989.1_g000017 Rmu_sc0004016.1_g000003 Rmu_sc0004020.1_g000025 Rmu_sc0004094.1_g000016 Rmu_sc0004135.1_g000002 Rmu_sc0004154.1_g000014 Rmu_sc0004316.1_g000002 Rmu_sc0004316.1_g000015 Rmu_sc0004321.1_g000013 Rmu_sc0004467.1_g000005 Rmu_sc0004517.1_g000007 Rmu_sc0004642.1_g000012 Rmu_sc0004729.1_g000024 Rmu_sc0004757.1_g000018 Rmu_sc0004788.1_g000003 Rmu_sc0004835.1_g000026 Rmu_sc0004889.1_g000019 Rmu_sc0004991.1_g000009 Rmu_sc0005045.1_g000004 Rmu_sc0005079.1_g000004 Rmu_sc0005083.1_g000008 Rmu_sc0005170.1_g000002 Rmu_sc0005190.1_g000009 Rmu_sc0005217.1_g000010 Rmu_sc0005234.1_g000011 Rmu_sc0005608.1_g000016 Rmu_sc0005802.1_g000029 Rmu_sc0005810.1_g000006 Rmu_sc0005904.1_g000006 Rmu_sc0005967.1_g000012 Rmu_sc0006028.1_g000027 Rmu_sc0006059.1_g000040 Rmu_sc0006423.1_g000002 Rmu_sc0006467.1_g000001 Rmu_sc0006470.1_g000004 Rmu_sc0006598.1_g000003 Rmu_sc0006599.1_g000004 Rmu_sc0006632.1_g000021 Rmu_sc0006707.1_g000008 Rmu_sc0006791.1_g000008 Rmu_sc0006835.1_g000016 Rmu_sc0007100.1_g000002 Rmu_sc0007115.1_g000009 Rmu_sc0007362.1_g000012 Rmu_sc0007461.1_g000004 Rmu_sc0007474.1_g000001 Rmu_sc0007681.1_g000011 Rmu_sc0007697.1_g000003 Rmu_sc0007704.1_g000001 Rmu_sc0007722.1_g000016 Rmu_sc0007843.1_g000001 Rmu_sc0007856.1_g000009 Rmu_sc0008328.1_g000007 Rmu_sc0008780.1_g000005 Rmu_sc0009185.1_g000011 Rmu_sc0009599.1_g000021 Rmu_sc0009881.1_g000002 Rmu_sc0009891.1_g000002 Rmu_sc0010357.1_g000003 Rmu_sc0010781.1_g000005 Rmu_sc0011133.1_g000005 Rmu_sc0012334.1_g000001 Rmu_sc0012569.1_g000015 Rmu_sc0012984.1_g000001 Rmu_sc0013508.1_g000001 Rmu_sc0013550.1_g000005 Rmu_sc0013730.1_g000001 Rmu_sc0013945.1_g000001 Rmu_sc0013945.1_g000003 Rmu_sc0014005.1_g000005 Rmu_sc0014111.1_g000009 Rmu_sc0014111.1_g000010 Rmu_sc0014203.1_g000025 Rmu_sc0014839.1_g000002 Rmu_sc0015410.1_g000001 Rmu_sc0015513.1_g000003 Rmu_sc0015791.1_g000008 Rmu_sc0016657.1_g000004 Rmu_sc0017187.1_g000002 Rmu_sc0017400.1_g000001 Rmu_sc0017895.1_g000006 Rmu_sc0018221.1_g000008 Rmu_sc0018825.1_g000002 Rmu_sc0019047.1_g000001 Rmu_sc0019077.1_g000001 Rmu_sc0019171.1_g000001 Rmu_sc0019299.1_g000002 Rmu_sc0020342.1_g000008 Rmu_sc0020688.1_g000002 Rmu_sc0020688.1_g000003 Rmu_sc0021871.1_g000012 Rmu_sc0022925.1_g000001 Rmu_sc0023965.1_g000005 Rmu_sc0024968.1_g000001 Rmu_sc0024969.1_g000001 Rmu_sc0025035.1_g000002 Rmu_sc0025167.1_g000005 Rmu_sc0025567.1_g000001 Rmu_sc0026096.1_g000001 Rmu_sc0026586.1_g000001 Rmu_sc0028358.1_g000002 Rmu_sc0032171.1_g000001 Rmu_sc0034632.1_g000001 Rmu_sc0034633.1_g000001 Rmu_sc0035481.1_g000001 Rmu_sc0036303.1_g000001 Rmu_sc0039774.1_g000001 Rmu_sc0040023.1_g000002 Rmu_sc0040790.1_g000001 Rmu_sc0041574.1_g000001 Rmu_sc0042768.1_g000003 Rmu_ssc0000038.1_g000016 Rmu_ssc0000062.1_g000035 Rmu_ssc0000083.1_g000009 Rmu_ssc0000093.1_g000006 Rmu_ssc0000112.1_g000023 Rmu_ssc0000155.1_g000007 Rmu_ssc0000171.1_g000017 Rmu_ssc0000196.1_g000017 Rmu_ssc0000257.1_g000027 Rmu_ssc0000323.1_g000023 Rmu_ssc0000440.1_g000011 Rmu_ssc0000454.1_g000021 Rmu_ssc0000473.1_g000011
rosa_roxburghii Rroxscaffold_1G00014010 Rroxscaffold_1G00039470 Rroxscaffold_1G00045350 Rroxscaffold_2G00082440 Rroxscaffold_2G00096630 Rroxscaffold_2G00100560 Rroxscaffold_2G00102600 Rroxscaffold_2G00117720 Rroxscaffold_2G00120390 Rroxscaffold_2G00126010 Rroxscaffold_3G00220680 Rroxscaffold_3G00241760 Rroxscaffold_4G00309670 Rroxscaffold_4G00312380 Rroxscaffold_5G00339950 Rroxscaffold_5G00361980 Rroxscaffold_5G00370500 Rroxscaffold_5G00376480 Rroxscaffold_5G00384070 Rroxscaffold_6G00393690 Rroxscaffold_6G00396520 Rroxscaffold_6G00396850 Rroxscaffold_6G00404790 Rroxscaffold_7G00177690 Rroxscaffold_7G00178170 Rroxscaffold_7G00194330 Rroxscaffold_7G00197090 Rroxscaffold_9G00437910
rosa_rugosa Rorug01G0010100 Rorug01G0035300 Rorug01G0038600 Rorug01G0038700 Rorug01G0050300 Rorug01G0143800.1 Rorug01G0211700 Rorug01G0266600 Rorug01G0268800 Rorug01G0301200 Rorug02G0139800 Rorug02G0247100 Rorug02G0247100 Rorug02G0276800 Rorug02G0283300 Rorug02G0289800 Rorug02G0326700 Rorug02G0368100 Rorug02G0427000 Rorug02G0439100 Rorug02G0611200 Rorug02G0626600 Rorug03G0049100 Rorug03G0108000 Rorug03G0118600 Rorug03G0174300.1 Rorug03G0182300 Rorug03G0189800 Rorug03G0207000 Rorug03G0220700 Rorug03G0229400 Rorug03G0253700 Rorug03G0276500 Rorug03G0283300.1 Rorug03G0283500 Rorug03G0283600 Rorug03G0299600 Rorug04G0052200 Rorug04G0052300 Rorug04G0115800 Rorug04G0159700 Rorug04G0170900 Rorug04G0178100 Rorug04G0250800 Rorug04G0317200 Rorug04G0409500 Rorug05G0022500 Rorug05G0134900 Rorug05G0144800 Rorug05G0158200 Rorug05G0168300 Rorug05G0168400 Rorug05G0168600 Rorug05G0229800 Rorug05G0259100 Rorug05G0285700 Rorug05G0294600 Rorug05G0306400 Rorug05G0335300 Rorug05G0390100 Rorug05G0392900 Rorug05G0407100 Rorug05G0416600 Rorug05G0536900 Rorug05G0550300 Rorug06G0040900 Rorug06G0042800 Rorug06G0093000 Rorug06G0110700 Rorug06G0115600 Rorug06G0205700 Rorug07G0016900.1 Rorug07G0017000 Rorug07G0095200 Rorug07G0106400 Rorug07G0116400 Rorug07G0127300 Rorug07G0151100 Rorug07G0151200 Rorug07G0178200 Rorug07G0224300 Rorug07G0224400 Rorug07G0226400 Rorug07G0258200 Rorug07G0328000 RorugPtG0002700.1
rosa_samantha Rh1BG231600 Rh1BG235500 Rh1DG259300 Rh2AG044200 Rh2AG095600 Rh2AG164800 Rh2AG361400 Rh2AG370600 Rh2AG487800 Rh2AG620400 Rh2BG171900 Rh2BG244600 Rh2BG500300 Rh2CG189500 Rh2CG317600 Rh2CG374400 Rh2CG474300 Rh2DG170300 Rh2DG374800 Rh2DG511500 Rh3AG273400 Rh3AG331300 Rh3CG203900 Rh3CG222200 Rh3CG253800 Rh3CG269900 Rh3DG073800 Rh3DG208100 Rh3DG224000 Rh3DG265900 Rh4AG217200 Rh4BG076000 Rh4BG113200 Rh4BG240700 Rh4BG414300 Rh4CG266600 Rh4CG307600 Rh5BG088500 Rh5BG469000 Rh5CG284400 Rh5CG491200 Rh5CG557400 Rh5DG399000 Rh6AG457400 Rh6BG339800 Rh6BG443700 Rh6CG115400 Rh6CG471500 Rh6DG390100 Rh6DG457900 Rh7AG372100 Rh7AG429800 Rh7AG484600 Rh7BG176400 Rh7BG233900 Rh7BG244400 Rh7BG279800 Rh7BG285100 Rh7CG172200 Rh7CG390500 Rh7CG502600 Rh7CG518200 Rh7DG252500 Rh7DG294200 Rh7DG376400 Rh7DG390100
rosa_wichuraiana Rw0G001650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 598
Acc16I TGCGCA 1 cut(s) 125
AclWI GGATC 3 cut(s) 138, 525, 569
AcoI YGGCCR 1 cut(s) 801
AcyI GRCGYC 1 cut(s) 595
AfaI GTAC 2 cut(s) 762, 841
AfiI CCNNNNNNNGG 4 cut(s) 67, 334, 533, 605
AflII CTTAAG 1 cut(s) 908
AgeI ACCGGT 1 cut(s) 550
AluBI AGCT 1 cut(s) 427
AluI AGCT 1 cut(s) 427
Alw21I GWGCWC 1 cut(s) 94
AlwI GGATC 3 cut(s) 138, 525, 569
AoxI GGCC 3 cut(s) 15, 155, 801
ApeKI GCWGC 1 cut(s) 545
AsiGI ACCGGT 1 cut(s) 550
AspA2I CCTAGG 1 cut(s) 604
AspLEI GCGC 1 cut(s) 126
AspS9I GGNCC 2 cut(s) 58, 155
AsuHPI GGTGA 2 cut(s) 16, 584
AsuII TTCGAA 1 cut(s) 253
AvaII GGWCC 1 cut(s) 58
AvrII CCTAGG 1 cut(s) 604
Bbv12I GWGCWC 1 cut(s) 94
BbvI GCAGC 1 cut(s) 557
BccI CCATC 4 cut(s) 194, 277, 562, 667
BclI TGATCA 2 cut(s) 294, 487
BfaI CTAG 4 cut(s) 533, 561, 605, 836
BfrI CTTAAG 1 cut(s) 908
BglI GCCNNNNNGGC 1 cut(s) 902
BglII AGATCT 1 cut(s) 671
BisI GCNGC 1 cut(s) 546
BlnI CCTAGG 1 cut(s) 604
BlsI GCNGC 1 cut(s) 547
Bme18I GGWCC 1 cut(s) 58
BmgT120I GGNCC 2 cut(s) 58, 155
BmiI GGNNCC 2 cut(s) 59, 177
BmrI ACTGGG 1 cut(s) 699
BmsI GCATC 2 cut(s) 784, 806
BmuI ACTGGG 1 cut(s) 699
Bpu14I TTCGAA 1 cut(s) 253
BpuEI CTTGAG 1 cut(s) 395
BsaAI YACGTR 2 cut(s) 725, 843
BsaBI GATNNNNATC 1 cut(s) 299
BsaHI GRCGYC 1 cut(s) 595
BsaJI CCNNGG 1 cut(s) 604
BsaWI WCCGGW 1 cut(s) 550
Bsc4I CCNNNNNNNGG 4 cut(s) 67, 334, 533, 605
Bse118I RCCGGY 2 cut(s) 13, 550
Bse1I ACTGG 2 cut(s) 694, 906
Bse3DI GCAATG 4 cut(s) 303, 490, 520, 898
Bse8I GATNNNNATC 1 cut(s) 299
BseDI CCNNGG 1 cut(s) 604
BseGI GGATG 4 cut(s) 343, 573, 717, 877
BseJI GATNNNNATC 1 cut(s) 299
BseLI CCNNNNNNNGG 4 cut(s) 67, 334, 533, 605
BseMI GCAATG 4 cut(s) 303, 490, 520, 898
BseMII CTCAG 1 cut(s) 744
BseNI ACTGG 2 cut(s) 694, 906
BseXI GCAGC 1 cut(s) 557
BsgI GTGCAG 1 cut(s) 688
BshFI GGCC 3 cut(s) 17, 157, 803
BshTI ACCGGT 1 cut(s) 550
BsiHKAI GWGCWC 1 cut(s) 94
BsiSI CCGG 2 cut(s) 14, 551
BslI CCNNNNNNNGG 4 cut(s) 67, 334, 533, 605
BsnI GGCC 3 cut(s) 17, 157, 803
Bsp119I TTCGAA 1 cut(s) 253
Bsp1286I GDGCHC 1 cut(s) 94
BspANI GGCC 3 cut(s) 17, 157, 803
BspCNI CTCAG 1 cut(s) 745
BspHI TCATGA 2 cut(s) 217, 508
BspLI GGNNCC 2 cut(s) 59, 177
BspPI GGATC 3 cut(s) 138, 525, 569
BspQI GCTCTTC 1 cut(s) 276
BspT104I TTCGAA 1 cut(s) 253
BspTI CTTAAG 1 cut(s) 908
BsrDI GCAATG 4 cut(s) 303, 490, 520, 898
BsrFI RCCGGY 2 cut(s) 13, 550
BsrI ACTGG 2 cut(s) 694, 906
BssAI RCCGGY 2 cut(s) 13, 550
BssECI CCNNGG 1 cut(s) 604
BssNI GRCGYC 1 cut(s) 595
BssT1I CCWWGG 1 cut(s) 604
Bst4CI ACNGT 1 cut(s) 787
Bst6I CTCTTC 1 cut(s) 276
BstACI GRCGYC 1 cut(s) 595
BstAFI CTTAAG 1 cut(s) 908
BstBAI YACGTR 2 cut(s) 725, 843
BstBI TTCGAA 1 cut(s) 253
BstC8I GCNNGC 3 cut(s) 429, 822, 826
BstDEI CTNAG 1 cut(s) 753
BstENI CCTNNNNNAGG 3 cut(s) 65, 531, 603
BstF5I GGATG 4 cut(s) 343, 573, 717, 877
BstHHI GCGC 1 cut(s) 126
BstMWI GCNNNNNNNGC 2 cut(s) 314, 902
BstV1I GCAGC 1 cut(s) 557
BstX2I RGATCY 1 cut(s) 671
BstYI RGATCY 1 cut(s) 671
BsuRI GGCC 3 cut(s) 17, 157, 803
BtsCI GGATG 4 cut(s) 343, 573, 717, 877
BtsIMutI CAGTG 1 cut(s) 687
Cac8I GCNNGC 3 cut(s) 429, 822, 826
CciI TCATGA 2 cut(s) 217, 508
CfoI GCGC 1 cut(s) 126
Cfr10I RCCGGY 2 cut(s) 13, 550
Cfr13I GGNCC 2 cut(s) 58, 155
Csp6I GTAC 2 cut(s) 761, 840
CspAI ACCGGT 1 cut(s) 550
CviAII CATG 9 cut(s) 218, 292, 377, 386, 437, 509, 542, 830, 847
CviQI GTAC 2 cut(s) 761, 840
DdeI CTNAG 1 cut(s) 753
EaeI YGGCCR 1 cut(s) 801
Eam1104I CTCTTC 1 cut(s) 276
EarI CTCTTC 1 cut(s) 276
Eco130I CCWWGG 1 cut(s) 604
Eco47I GGWCC 1 cut(s) 58
EcoNI CCTNNNNNAGG 3 cut(s) 65, 531, 603
EcoO109I RGGNCCY 2 cut(s) 58, 155
EcoT14I CCWWGG 1 cut(s) 604
EcoT22I ATGCAT 1 cut(s) 799
ErhI CCWWGG 1 cut(s) 604
FaeI CATG 9 cut(s) 221, 295, 380, 389, 440, 512, 545, 833, 850
FatI CATG 9 cut(s) 217, 291, 376, 385, 436, 508, 541, 829, 846
FbaI TGATCA 2 cut(s) 294, 487
Fnu4HI GCNGC 1 cut(s) 546
FokI GGATG 4 cut(s) 350, 580, 704, 884
Fsp4HI GCNGC 1 cut(s) 546
FspBI CTAG 4 cut(s) 533, 561, 605, 836
FspI TGCGCA 1 cut(s) 125
GlaI GCGC 1 cut(s) 125
GluI GCNGC 1 cut(s) 546
HaeIII GGCC 3 cut(s) 17, 157, 803
HapII CCGG 2 cut(s) 14, 551
HhaI GCGC 1 cut(s) 126
Hin1I GRCGYC 1 cut(s) 595
Hin1II CATG 9 cut(s) 221, 295, 380, 389, 440, 512, 545, 833, 850
Hin6I GCGC 1 cut(s) 124
HinP1I GCGC 1 cut(s) 124
HincII GTYRAC 1 cut(s) 783
HindII GTYRAC 1 cut(s) 783
HindIII AAGCTT 1 cut(s) 425
HinfI GANTC 1 cut(s) 165
HpaII CCGG 2 cut(s) 14, 551
HphI GGTGA 2 cut(s) 16, 584
Hpy166II GTNNAC 1 cut(s) 783
Hpy188I TCNGA 3 cut(s) 33, 644, 754
Hpy188III TCNNGA 6 cut(s) 83, 191, 218, 298, 412, 509
Hpy8I GTNNAC 1 cut(s) 783
HpyAV CCTTC 4 cut(s) 412, 506, 609, 626
HpyCH4III ACNGT 1 cut(s) 787
HpyCH4IV ACGT 3 cut(s) 595, 724, 842
HpyCH4V TGCA 8 cut(s) 383, 431, 495, 545, 669, 797, 824, 846
HpyF10VI GCNNNNNNNGC 2 cut(s) 314, 902
HpyF3I CTNAG 1 cut(s) 753
HpySE526I ACGT 3 cut(s) 595, 724, 842
Hsp92I GRCGYC 1 cut(s) 595
Hsp92II CATG 9 cut(s) 221, 295, 380, 389, 440, 512, 545, 833, 850
HspAI GCGC 1 cut(s) 124
Ksp22I TGATCA 2 cut(s) 294, 487
LguI GCTCTTC 1 cut(s) 276
LmnI GCTCC 2 cut(s) 181, 693
Lsp1109I GCAGC 1 cut(s) 557
LweI GCATC 2 cut(s) 784, 806
MaeI CTAG 4 cut(s) 533, 561, 605, 836
MaeII ACGT 3 cut(s) 595, 724, 842
MaeIII GTNAC 2 cut(s) 553, 613
MboII GAAGA 3 cut(s) 19, 235, 293
MflI RGATCY 1 cut(s) 671
MhlI GDGCHC 1 cut(s) 94
MluCI AATT 2 cut(s) 255, 622
MnlI CCTC 7 cut(s) 71, 146, 244, 444, 557, 748, 862
Mph1103I ATGCAT 1 cut(s) 799
MseI TTAA 1 cut(s) 909
MslI CAYNNNNRTG 1 cut(s) 664
MspCI CTTAAG 1 cut(s) 908
MspI CCGG 2 cut(s) 14, 551
MwoI GCNNNNNNNGC 2 cut(s) 314, 902
NlaIII CATG 9 cut(s) 221, 295, 380, 389, 440, 512, 545, 833, 850
NlaIV GGNNCC 2 cut(s) 59, 177
NsbI TGCGCA 1 cut(s) 125
NsiI ATGCAT 1 cut(s) 799
NspV TTCGAA 1 cut(s) 253
PagI TCATGA 2 cut(s) 217, 508
PciSI GCTCTTC 1 cut(s) 276
PfeI GAWTC 1 cut(s) 165
PinAI ACCGGT 1 cut(s) 550
PkrI GCNGC 1 cut(s) 547
Ppu21I YACGTR 2 cut(s) 725, 843
PpuMI RGGWCCY 1 cut(s) 58
Psp5II RGGWCCY 1 cut(s) 58
PspN4I GGNNCC 2 cut(s) 59, 177
PspPI GGNCC 2 cut(s) 58, 155
PspPPI RGGWCCY 1 cut(s) 58
PsuI RGATCY 1 cut(s) 671
RsaI GTAC 2 cut(s) 762, 841
RsaNI GTAC 2 cut(s) 761, 840
RseI CAYNNNNRTG 1 cut(s) 664
SapI GCTCTTC 1 cut(s) 276
SaqAI TTAA 1 cut(s) 909
SatI GCNGC 1 cut(s) 546
Sau96I GGNCC 2 cut(s) 58, 155
SduI GDGCHC 1 cut(s) 94
SfaNI GCATC 2 cut(s) 784, 806
SfuI TTCGAA 1 cut(s) 253
SinI GGWCC 1 cut(s) 58
SmiMI CAYNNNNRTG 1 cut(s) 664
SmlI CTYRAG 2 cut(s) 410, 908
SmoI CTYRAG 2 cut(s) 410, 908
Sse9I AATT 2 cut(s) 255, 622
SspMI CTAG 4 cut(s) 533, 561, 605, 836
StyI CCWWGG 1 cut(s) 604
TaaI ACNGT 1 cut(s) 787
TaiI ACGT 3 cut(s) 598, 727, 845
TaqI TCGA 3 cut(s) 63, 253, 447
TasI AATT 2 cut(s) 255, 622
TfiI GAWTC 1 cut(s) 165
Tru1I TTAA 1 cut(s) 909
Tru9I TTAA 1 cut(s) 909
TscAI CASTG 1 cut(s) 694
TseI GCWGC 1 cut(s) 545
TspDTI ATGAA 5 cut(s) 206, 365, 525, 752, 863
TspRI CASTG 1 cut(s) 694
Vha464I CTTAAG 1 cut(s) 908
VpaK11BI GGWCC 1 cut(s) 58
XagI CCTNNNNNAGG 3 cut(s) 65, 531, 603
XmaJI CCTAGG 1 cut(s) 604
XspI CTAG 4 cut(s) 533, 561, 605, 836
ZraI GACGTC 1 cut(s) 596
Zsp2I ATGCAT 1 cut(s) 799
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.