Cyclic nucleotide-gated ion channel 1-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NmrA | PF05368 | 88 - 377 | 9.4e-13 | NmrA-like family |
| Epimerase | PF01370 | 89 - 211 | 1e-10 | NAD dependent epimerase/dehydratase family |
| 3Beta_HSD | PF01073 | 90 - 211 | 1.1e-06 | 3-beta hydroxysteroid dehydrogenase/isomerase family |
| NAD_binding_10 | PF13460 | 93 - 294 | 1.7e-20 | NAD(P)H-binding |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1175, 1240 |
| AccII | CGCG | 2 cut(s) | 67, 660 |
| AciI | CCGC | 4 cut(s) | 21, 24, 848, 1109 |
| AclI | AACGTT | 1 cut(s) | 264 |
| AclWI | GGATC | 2 cut(s) | 1127, 1140 |
| AcoI | YGGCCR | 1 cut(s) | 1231 |
| AcsI | RAATTY | 1 cut(s) | 650 |
| AcuI | CTGAAG | 2 cut(s) | 171, 689 |
| AfaI | GTAC | 1 cut(s) | 290 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 97, 917, 1142, 1175, 1240 |
| AflIII | ACRYGT | 2 cut(s) | 65, 1185 |
| AgsI | TTSAA | 9 cut(s) | 31, 198, 215, 334, 409, 486, 650, 997, 1065 |
| AjnI | CCWGG | 2 cut(s) | 900, 1233 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 314, 346, 974, 1006 |
| AluBI | AGCT | 6 cut(s) | 57, 144, 344, 667, 698, 756 |
| AluI | AGCT | 6 cut(s) | 57, 144, 344, 667, 698, 756 |
| Alw26I | GTCTC | 2 cut(s) | 386, 1133 |
| AlwI | GGATC | 2 cut(s) | 1127, 1140 |
| AoxI | GGCC | 2 cut(s) | 734, 1231 |
| ApoI | RAATTY | 1 cut(s) | 650 |
| AspLEI | GCGC | 2 cut(s) | 660, 662 |
| AspS9I | GGNCC | 1 cut(s) | 920 |
| AsuC2I | CCSGG | 1 cut(s) | 924 |
| AsuHPI | GGTGA | 2 cut(s) | 76, 790 |
| AsuNHI | GCTAGC | 1 cut(s) | 512 |
| AvaII | GGWCC | 1 cut(s) | 920 |
| BalI | TGGCCA | 1 cut(s) | 1233 |
| BamHI | GGATCC | 1 cut(s) | 1132 |
| BbsI | GAAGAC | 2 cut(s) | 1077, 1200 |
| BccI | CCATC | 4 cut(s) | 136, 779, 806, 1219 |
| BceAI | ACGGC | 2 cut(s) | 501, 778 |
| BciT130I | CCWGG | 2 cut(s) | 902, 1235 |
| BclI | TGATCA | 1 cut(s) | 687 |
| BcnI | CCSGG | 1 cut(s) | 924 |
| BcoDI | GTCTC | 2 cut(s) | 386, 1133 |
| BfaI | CTAG | 2 cut(s) | 351, 513 |
| BisI | GCNGC | 2 cut(s) | 24, 1110 |
| BlsI | GCNGC | 2 cut(s) | 25, 1111 |
| Bme1390I | CCNGG | 3 cut(s) | 902, 924, 1235 |
| Bme18I | GGWCC | 1 cut(s) | 920 |
| BmgT120I | GGNCC | 1 cut(s) | 920 |
| BmiI | GGNNCC | 4 cut(s) | 125, 415, 984, 1134 |
| BmrFI | CCNGG | 3 cut(s) | 902, 924, 1235 |
| BmrI | ACTGGG | 2 cut(s) | 129, 294 |
| BmtI | GCTAGC | 1 cut(s) | 516 |
| BmuI | ACTGGG | 2 cut(s) | 129, 294 |
| BpiI | GAAGAC | 2 cut(s) | 1077, 1200 |
| BpuMI | CCSGG | 1 cut(s) | 924 |
| BsaI | GGTCTC | 1 cut(s) | 1133 |
| BsaJI | CCNNGG | 1 cut(s) | 923 |
| BsaWI | WCCGGW | 1 cut(s) | 1142 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 405, 435, 753, 783, 947, 977 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 97, 917, 1142, 1175, 1240 |
| Bse118I | RCCGGY | 1 cut(s) | 581 |
| Bse1I | ACTGG | 3 cut(s) | 124, 289, 403 |
| BseBI | CCWGG | 2 cut(s) | 902, 1235 |
| BseDI | CCNNGG | 1 cut(s) | 923 |
| BseGI | GGATG | 4 cut(s) | 394, 685, 817, 1230 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 97, 917, 1142, 1175, 1240 |
| BseMII | CTCAG | 5 cut(s) | 54, 1104, 1128, 1149, 1205 |
| BseNI | ACTGG | 3 cut(s) | 124, 289, 403 |
| BsePI | GCGCGC | 1 cut(s) | 658 |
| BseRI | GAGGAG | 1 cut(s) | 7 |
| BsgI | GTGCAG | 1 cut(s) | 653 |
| Bsh1236I | CGCG | 2 cut(s) | 67, 660 |
| Bsh1285I | CGRYCG | 1 cut(s) | 222 |
| BshFI | GGCC | 2 cut(s) | 736, 1233 |
| BsiEI | CGRYCG | 1 cut(s) | 222 |
| BsiSI | CCGG | 3 cut(s) | 582, 923, 1143 |
| BslFI | GGGAC | 1 cut(s) | 234 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 97, 917, 1142, 1175, 1240 |
| BsmAI | GTCTC | 2 cut(s) | 386, 1133 |
| BsmFI | GGGAC | 1 cut(s) | 234 |
| BsmI | GAATGC | 2 cut(s) | 26, 743 |
| BsnI | GGCC | 2 cut(s) | 736, 1233 |
| Bso31I | GGTCTC | 1 cut(s) | 1133 |
| Bsp143I | GATC | 2 cut(s) | 687, 1132 |
| BspACI | CCGC | 4 cut(s) | 21, 24, 848, 1109 |
| BspANI | GGCC | 2 cut(s) | 736, 1233 |
| BspCNI | CTCAG | 5 cut(s) | 53, 1105, 1129, 1150, 1206 |
| BspFNI | CGCG | 2 cut(s) | 67, 660 |
| BspLI | GGNNCC | 4 cut(s) | 125, 415, 984, 1134 |
| BspOI | GCTAGC | 1 cut(s) | 516 |
| BspPI | GGATC | 2 cut(s) | 1127, 1140 |
| BspTNI | GGTCTC | 1 cut(s) | 1133 |
| BsrFI | RCCGGY | 1 cut(s) | 581 |
| BsrI | ACTGG | 3 cut(s) | 124, 289, 403 |
| BssAI | RCCGGY | 1 cut(s) | 581 |
| BssECI | CCNNGG | 1 cut(s) | 923 |
| BssHII | GCGCGC | 1 cut(s) | 658 |
| BssMI | GATC | 2 cut(s) | 687, 1132 |
| Bst2UI | CCWGG | 2 cut(s) | 902, 1235 |
| Bst4CI | ACNGT | 5 cut(s) | 211, 223, 572, 710, 1210 |
| Bst6I | CTCTTC | 4 cut(s) | 79, 112, 353, 648 |
| BstC8I | GCNNGC | 5 cut(s) | 514, 660, 829, 833, 1231 |
| BstDEI | CTNAG | 6 cut(s) | 40, 96, 1113, 1137, 1158, 1214 |
| BstEII | GGTNACC | 1 cut(s) | 100 |
| BstF5I | GGATG | 4 cut(s) | 394, 685, 817, 1230 |
| BstFNI | CGCG | 2 cut(s) | 67, 660 |
| BstHHI | GCGC | 2 cut(s) | 660, 662 |
| BstKTI | GATC | 2 cut(s) | 690, 1135 |
| BstMAI | GTCTC | 2 cut(s) | 386, 1133 |
| BstMBI | GATC | 2 cut(s) | 687, 1132 |
| BstMCI | CGRYCG | 1 cut(s) | 222 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 513, 664, 854 |
| BstNI | CCWGG | 2 cut(s) | 902, 1235 |
| BstPI | GGTNACC | 1 cut(s) | 100 |
| BstSCI | CCNGG | 3 cut(s) | 900, 922, 1233 |
| BstUI | CGCG | 2 cut(s) | 67, 660 |
| BstV2I | GAAGAC | 2 cut(s) | 1077, 1200 |
| BstX2I | RGATCY | 1 cut(s) | 1132 |
| BstYI | RGATCY | 1 cut(s) | 1132 |
| BsuRI | GGCC | 2 cut(s) | 736, 1233 |
| BtsCI | GGATG | 4 cut(s) | 394, 685, 817, 1230 |
| BtsIMutI | CAGTG | 1 cut(s) | 715 |
| Cac8I | GCNNGC | 5 cut(s) | 514, 660, 829, 833, 1231 |
| CfoI | GCGC | 2 cut(s) | 660, 662 |
| Cfr10I | RCCGGY | 1 cut(s) | 581 |
| Cfr13I | GGNCC | 1 cut(s) | 920 |
| CsiI | ACCWGGT | 1 cut(s) | 900 |
| Csp6I | GTAC | 1 cut(s) | 289 |
| CviQI | GTAC | 1 cut(s) | 289 |
| DdeI | CTNAG | 6 cut(s) | 40, 96, 1113, 1137, 1158, 1214 |
| DpnI | GATC | 2 cut(s) | 689, 1134 |
| DpnII | GATC | 2 cut(s) | 687, 1132 |
| DraI | TTTAAA | 1 cut(s) | 399 |
| EaeI | YGGCCR | 1 cut(s) | 1231 |
| Eam1104I | CTCTTC | 4 cut(s) | 79, 112, 353, 648 |
| EarI | CTCTTC | 4 cut(s) | 79, 112, 353, 648 |
| EciI | GGCGGA | 1 cut(s) | 10 |
| Eco31I | GGTCTC | 1 cut(s) | 1133 |
| Eco47I | GGWCC | 1 cut(s) | 920 |
| Eco57I | CTGAAG | 2 cut(s) | 171, 689 |
| Eco91I | GGTNACC | 1 cut(s) | 100 |
| EcoO65I | GGTNACC | 1 cut(s) | 100 |
| EcoRI | GAATTC | 1 cut(s) | 650 |
| EcoRII | CCWGG | 2 cut(s) | 900, 1233 |
| FaqI | GGGAC | 1 cut(s) | 234 |
| FbaI | TGATCA | 1 cut(s) | 687 |
| Fnu4HI | GCNGC | 2 cut(s) | 24, 1110 |
| FokI | GGATG | 4 cut(s) | 401, 692, 824, 1237 |
| Fsp4HI | GCNGC | 2 cut(s) | 24, 1110 |
| FspBI | CTAG | 2 cut(s) | 351, 513 |
| GlaI | GCGC | 2 cut(s) | 659, 661 |
| GluI | GCNGC | 2 cut(s) | 24, 1110 |
| HaeIII | GGCC | 2 cut(s) | 736, 1233 |
| HapII | CCGG | 3 cut(s) | 582, 923, 1143 |
| HhaI | GCGC | 2 cut(s) | 660, 662 |
| Hin6I | GCGC | 2 cut(s) | 658, 660 |
| HinP1I | GCGC | 2 cut(s) | 658, 660 |
| HindIII | AAGCTT | 1 cut(s) | 142 |
| HinfI | GANTC | 2 cut(s) | 536, 589 |
| HpaII | CCGG | 3 cut(s) | 582, 923, 1143 |
| HphI | GGTGA | 2 cut(s) | 76, 790 |
| Hpy166II | GTNNAC | 1 cut(s) | 920 |
| Hpy188I | TCNGA | 4 cut(s) | 151, 433, 1088, 1262 |
| Hpy188III | TCNNGA | 5 cut(s) | 238, 647, 994, 1136, 1204 |
| Hpy8I | GTNNAC | 1 cut(s) | 920 |
| HpyAV | CCTTC | 5 cut(s) | 240, 526, 922, 1071, 1092 |
| HpyCH4III | ACNGT | 5 cut(s) | 211, 223, 572, 710, 1210 |
| HpyCH4IV | ACGT | 2 cut(s) | 264, 1187 |
| HpyCH4V | TGCA | 5 cut(s) | 281, 623, 634, 743, 831 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 513, 664, 854 |
| HpyF3I | CTNAG | 6 cut(s) | 40, 96, 1113, 1137, 1158, 1214 |
| HpySE526I | ACGT | 2 cut(s) | 264, 1187 |
| HspAI | GCGC | 2 cut(s) | 658, 660 |
| Ksp22I | TGATCA | 1 cut(s) | 687 |
| Kzo9I | GATC | 2 cut(s) | 687, 1132 |
| LmnI | GCTCC | 3 cut(s) | 413, 946, 1246 |
| MabI | ACCWGGT | 1 cut(s) | 900 |
| MaeI | CTAG | 2 cut(s) | 351, 513 |
| MaeII | ACGT | 2 cut(s) | 264, 1187 |
| MaeIII | GTNAC | 3 cut(s) | 100, 223, 436 |
| MalI | GATC | 2 cut(s) | 689, 1134 |
| MboI | GATC | 2 cut(s) | 687, 1132 |
| MfeI | CAATTG | 1 cut(s) | 486 |
| MflI | RGATCY | 1 cut(s) | 1132 |
| MlsI | TGGCCA | 1 cut(s) | 1233 |
| MluCI | AATT | 6 cut(s) | 442, 473, 486, 650, 1238, 1254 |
| MluI | ACGCGT | 1 cut(s) | 65 |
| MluNI | TGGCCA | 1 cut(s) | 1233 |
| MmeI | TCCRAC | 1 cut(s) | 1170 |
| Mox20I | TGGCCA | 1 cut(s) | 1233 |
| MscI | TGGCCA | 1 cut(s) | 1233 |
| MseI | TTAA | 8 cut(s) | 62, 140, 159, 261, 309, 398, 750, 897 |
| Msp20I | TGGCCA | 1 cut(s) | 1233 |
| MspI | CCGG | 3 cut(s) | 582, 923, 1143 |
| MspR9I | CCNGG | 3 cut(s) | 902, 924, 1235 |
| MunI | CAATTG | 1 cut(s) | 486 |
| Mva1269I | GAATGC | 2 cut(s) | 26, 743 |
| MvaI | CCWGG | 2 cut(s) | 902, 1235 |
| MvnI | CGCG | 2 cut(s) | 67, 660 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 513, 664, 854 |
| NciI | CCSGG | 1 cut(s) | 924 |
| NdeII | GATC | 2 cut(s) | 687, 1132 |
| NheI | GCTAGC | 1 cut(s) | 512 |
| NlaIV | GGNNCC | 4 cut(s) | 125, 415, 984, 1134 |
| NmeAIII | GCCGAG | 1 cut(s) | 1105 |
| NmuCI | GTSAC | 1 cut(s) | 436 |
| PauI | GCGCGC | 1 cut(s) | 658 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 197 |
| PctI | GAATGC | 2 cut(s) | 26, 743 |
| PfeI | GAWTC | 2 cut(s) | 536, 589 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1175, 1240 |
| PkrI | GCNGC | 2 cut(s) | 25, 1111 |
| Psp1406I | AACGTT | 1 cut(s) | 264 |
| Psp6I | CCWGG | 2 cut(s) | 900, 1233 |
| PspEI | GGTNACC | 1 cut(s) | 100 |
| PspGI | CCWGG | 2 cut(s) | 900, 1233 |
| PspN4I | GGNNCC | 4 cut(s) | 125, 415, 984, 1134 |
| PspPI | GGNCC | 1 cut(s) | 920 |
| PsuI | RGATCY | 1 cut(s) | 1132 |
| PteI | GCGCGC | 1 cut(s) | 658 |
| RsaI | GTAC | 1 cut(s) | 290 |
| RsaNI | GTAC | 1 cut(s) | 289 |
| SaqAI | TTAA | 8 cut(s) | 62, 140, 159, 261, 309, 398, 750, 897 |
| SatI | GCNGC | 2 cut(s) | 24, 1110 |
| Sau3AI | GATC | 2 cut(s) | 687, 1132 |
| Sau96I | GGNCC | 1 cut(s) | 920 |
| ScrFI | CCNGG | 3 cut(s) | 902, 924, 1235 |
| SexAI | ACCWGGT | 1 cut(s) | 900 |
| SinI | GGWCC | 1 cut(s) | 920 |
| Sse9I | AATT | 6 cut(s) | 442, 473, 486, 650, 1238, 1254 |
| SsiI | CCGC | 4 cut(s) | 21, 24, 848, 1109 |
| SspMI | CTAG | 2 cut(s) | 351, 513 |
| StyD4I | CCNGG | 3 cut(s) | 900, 922, 1233 |
| TaaI | ACNGT | 5 cut(s) | 211, 223, 572, 710, 1210 |
| TaiI | ACGT | 2 cut(s) | 267, 1190 |
| TaqI | TCGA | 1 cut(s) | 675 |
| TasI | AATT | 6 cut(s) | 442, 473, 486, 650, 1238, 1254 |
| TauI | GCSGC | 2 cut(s) | 26, 1112 |
| TfiI | GAWTC | 2 cut(s) | 536, 589 |
| Tru1I | TTAA | 8 cut(s) | 62, 140, 159, 261, 309, 398, 750, 897 |
| Tru9I | TTAA | 8 cut(s) | 62, 140, 159, 261, 309, 398, 750, 897 |
| TscAI | CASTG | 1 cut(s) | 715 |
| TseFI | GTSAC | 1 cut(s) | 436 |
| Tsp45I | GTSAC | 1 cut(s) | 436 |
| TspDTI | ATGAA | 1 cut(s) | 222 |
| TspGWI | ACGGA | 1 cut(s) | 126 |
| TspRI | CASTG | 1 cut(s) | 715 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1175, 1240 |
| VpaK11BI | GGWCC | 1 cut(s) | 920 |
| XapI | RAATTY | 1 cut(s) | 650 |
| XspI | CTAG | 2 cut(s) | 351, 513 |