Zinc knuckle
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 38 |
| AclWI | GGATC | 2 cut(s) | 100, 171 |
| AfaI | GTAC | 1 cut(s) | 299 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 262 |
| AflII | CTTAAG | 1 cut(s) | 281 |
| AgeI | ACCGGT | 1 cut(s) | 313 |
| AgsI | TTSAA | 2 cut(s) | 181, 247 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 81, 113 |
| AlwI | GGATC | 2 cut(s) | 100, 171 |
| ApeKI | GCWGC | 1 cut(s) | 35 |
| AsiGI | ACCGGT | 1 cut(s) | 313 |
| AspLEI | GCGC | 1 cut(s) | 35 |
| AspS9I | GGNCC | 1 cut(s) | 290 |
| AvaII | GGWCC | 1 cut(s) | 290 |
| BbsI | GAAGAC | 1 cut(s) | 125 |
| BbvI | GCAGC | 1 cut(s) | 22 |
| BccI | CCATC | 3 cut(s) | 80, 87, 194 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 5, 39 |
| BfaI | CTAG | 2 cut(s) | 54, 218 |
| BfrI | CTTAAG | 1 cut(s) | 281 |
| BfuAI | ACCTGC | 1 cut(s) | 38 |
| BglII | AGATCT | 1 cut(s) | 56 |
| BisI | GCNGC | 1 cut(s) | 36 |
| BlsI | GCNGC | 1 cut(s) | 37 |
| Bme18I | GGWCC | 1 cut(s) | 290 |
| BmgT120I | GGNCC | 1 cut(s) | 290 |
| BpiI | GAAGAC | 1 cut(s) | 125 |
| BsaJI | CCNNGG | 1 cut(s) | 293 |
| BsaWI | WCCGGW | 2 cut(s) | 160, 313 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 81, 111 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 262 |
| Bse118I | RCCGGY | 1 cut(s) | 313 |
| BseDI | CCNNGG | 1 cut(s) | 293 |
| BseGI | GGATG | 2 cut(s) | 91, 205 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 262 |
| BseXI | GCAGC | 1 cut(s) | 22 |
| BshTI | ACCGGT | 1 cut(s) | 313 |
| BsiSI | CCGG | 2 cut(s) | 161, 314 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 262 |
| Bsp143I | GATC | 4 cut(s) | 56, 92, 163, 232 |
| Bsp19I | CCATGG | 1 cut(s) | 293 |
| BspMI | ACCTGC | 1 cut(s) | 38 |
| BspPI | GGATC | 2 cut(s) | 100, 171 |
| BspTI | CTTAAG | 1 cut(s) | 281 |
| BsrFI | RCCGGY | 1 cut(s) | 313 |
| BssAI | RCCGGY | 1 cut(s) | 313 |
| BssECI | CCNNGG | 1 cut(s) | 293 |
| BssMI | GATC | 4 cut(s) | 56, 92, 163, 232 |
| BssT1I | CCWWGG | 1 cut(s) | 293 |
| BstAFI | CTTAAG | 1 cut(s) | 281 |
| BstDSI | CCRYGG | 1 cut(s) | 293 |
| BstF5I | GGATG | 2 cut(s) | 91, 205 |
| BstHHI | GCGC | 1 cut(s) | 35 |
| BstKTI | GATC | 4 cut(s) | 59, 95, 166, 235 |
| BstMBI | GATC | 4 cut(s) | 56, 92, 163, 232 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 32, 44 |
| BstV1I | GCAGC | 1 cut(s) | 22 |
| BstV2I | GAAGAC | 1 cut(s) | 125 |
| BstX2I | RGATCY | 3 cut(s) | 56, 92, 163 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 86 |
| BstYI | RGATCY | 3 cut(s) | 56, 92, 163 |
| BtgI | CCRYGG | 1 cut(s) | 293 |
| BtsCI | GGATG | 2 cut(s) | 91, 205 |
| BtsI | GCAGTG | 1 cut(s) | 21 |
| BtsIMutI | CAGTG | 1 cut(s) | 21 |
| BveI | ACCTGC | 1 cut(s) | 38 |
| CfoI | GCGC | 1 cut(s) | 35 |
| Cfr10I | RCCGGY | 1 cut(s) | 313 |
| Cfr13I | GGNCC | 1 cut(s) | 290 |
| Csp6I | GTAC | 1 cut(s) | 298 |
| CspAI | ACCGGT | 1 cut(s) | 313 |
| CviAII | CATG | 1 cut(s) | 294 |
| CviJI | RGCY | 5 cut(s) | 5, 53, 116, 128, 329 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 53, 116, 128, 329 |
| CviQI | GTAC | 1 cut(s) | 298 |
| DpnI | GATC | 4 cut(s) | 58, 94, 165, 234 |
| DpnII | GATC | 4 cut(s) | 56, 92, 163, 232 |
| DraI | TTTAAA | 1 cut(s) | 210 |
| Eco130I | CCWWGG | 1 cut(s) | 293 |
| Eco47I | GGWCC | 1 cut(s) | 290 |
| EcoT14I | CCWWGG | 1 cut(s) | 293 |
| ErhI | CCWWGG | 1 cut(s) | 293 |
| FaeI | CATG | 1 cut(s) | 297 |
| FaiI | YATR | 4 cut(s) | 121, 295, 320, 333 |
| FatI | CATG | 1 cut(s) | 293 |
| Fnu4HI | GCNGC | 1 cut(s) | 36 |
| FokI | GGATG | 2 cut(s) | 98, 212 |
| Fsp4HI | GCNGC | 1 cut(s) | 36 |
| FspBI | CTAG | 2 cut(s) | 54, 218 |
| GlaI | GCGC | 1 cut(s) | 34 |
| GluI | GCNGC | 1 cut(s) | 36 |
| HapII | CCGG | 2 cut(s) | 161, 314 |
| HhaI | GCGC | 1 cut(s) | 35 |
| Hin1II | CATG | 1 cut(s) | 297 |
| Hin6I | GCGC | 1 cut(s) | 33 |
| HinP1I | GCGC | 1 cut(s) | 33 |
| HpaII | CCGG | 2 cut(s) | 161, 314 |
| Hpy166II | GTNNAC | 2 cut(s) | 70, 110 |
| Hpy188I | TCNGA | 3 cut(s) | 61, 138, 306 |
| Hpy188III | TCNNGA | 1 cut(s) | 83 |
| Hpy8I | GTNNAC | 2 cut(s) | 70, 110 |
| HpyAV | CCTTC | 2 cut(s) | 142, 266 |
| HpyCH4IV | ACGT | 1 cut(s) | 172 |
| HpyCH4V | TGCA | 1 cut(s) | 169 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 32, 44 |
| HpySE526I | ACGT | 1 cut(s) | 172 |
| Hsp92II | CATG | 1 cut(s) | 297 |
| HspAI | GCGC | 1 cut(s) | 33 |
| Kzo9I | GATC | 4 cut(s) | 56, 92, 163, 232 |
| LmnI | GCTCC | 1 cut(s) | 349 |
| LpnPI | CCDG | 8 cut(s) | 43, 68, 98, 142, 174, 243, 247, 327 |
| Lsp1109I | GCAGC | 1 cut(s) | 22 |
| MaeI | CTAG | 2 cut(s) | 54, 218 |
| MaeII | ACGT | 1 cut(s) | 172 |
| MaeIII | GTNAC | 3 cut(s) | 19, 151, 173 |
| MalI | GATC | 4 cut(s) | 58, 94, 165, 234 |
| MboI | GATC | 4 cut(s) | 56, 92, 163, 232 |
| MboII | GAAGA | 2 cut(s) | 125, 157 |
| MflI | RGATCY | 3 cut(s) | 56, 92, 163 |
| MmeI | TCCRAC | 1 cut(s) | 177 |
| MnlI | CCTC | 2 cut(s) | 83, 281 |
| MseI | TTAA | 2 cut(s) | 209, 282 |
| MslI | CAYNNNNRTG | 1 cut(s) | 84 |
| MspCI | CTTAAG | 1 cut(s) | 281 |
| MspI | CCGG | 2 cut(s) | 161, 314 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 32, 44 |
| NcoI | CCATGG | 1 cut(s) | 293 |
| NdeII | GATC | 4 cut(s) | 56, 92, 163, 232 |
| NlaIII | CATG | 1 cut(s) | 297 |
| NmuCI | GTSAC | 2 cut(s) | 19, 173 |
| PflFI | GACNNNGTC | 1 cut(s) | 17 |
| PinAI | ACCGGT | 1 cut(s) | 313 |
| PkrI | GCNGC | 1 cut(s) | 37 |
| PspPI | GGNCC | 1 cut(s) | 290 |
| PsuI | RGATCY | 3 cut(s) | 56, 92, 163 |
| PsyI | GACNNNGTC | 1 cut(s) | 17 |
| RsaI | GTAC | 1 cut(s) | 299 |
| RsaNI | GTAC | 1 cut(s) | 298 |
| RseI | CAYNNNNRTG | 1 cut(s) | 84 |
| SaqAI | TTAA | 2 cut(s) | 209, 282 |
| SatI | GCNGC | 1 cut(s) | 36 |
| Sau3AI | GATC | 4 cut(s) | 56, 92, 163, 232 |
| Sau96I | GGNCC | 1 cut(s) | 290 |
| SetI | ASST | 6 cut(s) | 32, 153, 175, 216, 258, 342 |
| SinI | GGWCC | 1 cut(s) | 290 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 84 |
| SmlI | CTYRAG | 1 cut(s) | 281 |
| SmoI | CTYRAG | 1 cut(s) | 281 |
| SspMI | CTAG | 2 cut(s) | 54, 218 |
| StyI | CCWWGG | 1 cut(s) | 293 |
| TaiI | ACGT | 1 cut(s) | 175 |
| Tru1I | TTAA | 2 cut(s) | 209, 282 |
| Tru9I | TTAA | 2 cut(s) | 209, 282 |
| TscAI | CASTG | 1 cut(s) | 28 |
| TseFI | GTSAC | 2 cut(s) | 19, 173 |
| TseI | GCWGC | 1 cut(s) | 35 |
| Tsp45I | GTSAC | 2 cut(s) | 19, 173 |
| TspDTI | ATGAA | 1 cut(s) | 89 |
| TspRI | CASTG | 1 cut(s) | 28 |
| Tth111I | GACNNNGTC | 1 cut(s) | 17 |
| Vha464I | CTTAAG | 1 cut(s) | 281 |
| VpaK11BI | GGWCC | 1 cut(s) | 290 |
| XspI | CTAG | 2 cut(s) | 54, 218 |